Best Alignments for T0209

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o6xA/T0209-1o6xA-t2k-global-adpstyle5.a2m 1o6xA/T0209-1o6xA-t2k-global-adpstyle5.al 1.7551e+017.6141e+00 d.58.3.1
1pv8A/T0209-1pv8A-t2k-global-adpstyle5.a2m 1pv8A/T0209-1pv8A-t2k-global-adpstyle5.al 1.9806e+011.2627e+01 c.1.10.3
1e51A/1b4kA-T0209-fssp-local-adpstyle5.a2m 1e51A/1b4kA-T0209-fssp-local-adpstyle5.al 1.9905e+014.7187e+00 1b4kA c.1.10.3
1kgiA/T0209-1kgiA-t04-local-adpstyle5.a2m 1kgiA/T0209-1kgiA-t04-local-adpstyle5.al 2.3610e+011.9463e+01 b.3.4.1
1nz2A/T0209-1nz2A-t04-global-adpstyle5.a2m 1nz2A/T0209-1nz2A-t04-global-adpstyle5.al 3.5399e+019.8369e+00 a.1.1.2
1jmg/1bkpA-T0209-fssp-local-adpstyle5.a2m 1jmg/1bkpA-T0209-fssp-local-adpstyle5.al 3.7091e+011.1355e+01 1bkpA d.117.1.1
1gkeA/1etb1-T0209-fssp-local-adpstyle5.a2m 1gkeA/1etb1-T0209-fssp-local-adpstyle5.al 3.8055e+019.8478e+00 1etb1 b.3.4.1
1p6gS/T0209-1p6gS-t2k-global-adpstyle1.a2m 1p6gS/T0209-1p6gS-t2k-global-adpstyle1.al 3.9006e+013.2004e+01 i.1.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001