Best Alignments for T0209

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1fpmA/T0209-1fpmA-t2k-local-adpstyle5.a2m 1fpmA/T0209-1fpmA-t2k-local-adpstyle5.al 9.7751e+001.0029e+01 c.37.1.10
1onoA/T0209-1onoA-t2k-global-adpstyle5.a2m 1onoA/T0209-1onoA-t2k-global-adpstyle5.al 2.2596e+019.7629e+00 c.2.1.3
a.69.3.1
d.81.1.3
1ixsA/T0209-1ixsA-t2k-global-adpstyle1.a2m 1ixsA/T0209-1ixsA-t2k-global-adpstyle1.al 2.5106e+011.4142e+01 a.5.1.1
1oynA/T0209-1oynA-t2k-local-adpstyle1.a2m 1oynA/T0209-1oynA-t2k-local-adpstyle1.al 3.0163e+013.4057e+01 a.125.1.1
1gu6A/T0209-1gu6A-t2k-global-adpstyle5.a2m 1gu6A/T0209-1gu6A-t2k-global-adpstyle5.al 4.0644e+012.9844e+01 a.138.1.3
1dfvA/1nglA-T0209-fssp-local-adpstyle5.a2m 1dfvA/1nglA-T0209-fssp-local-adpstyle5.al 4.7538e+011.1865e+01 1nglA b.60.1.1
1l6mA/T0209-1l6mA-t2k-local-adpstyle1.a2m 1l6mA/T0209-1l6mA-t2k-local-adpstyle1.al 4.7752e+015.5679e+01 b.60.1.1
1e0uA/1a49A-T0209-fssp-local-adpstyle5.a2m 1e0uA/1a49A-T0209-fssp-local-adpstyle5.al 4.9026e+011.4998e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1qh2A/T0209-1qh2A-t2k-global-adpstyle1.a2m 1qh2A/T0209-1qh2A-t2k-global-adpstyle1.al 5.6350e+015.8214e+01
1h3zA/T0209-1h3zA-t2k-local-adpstyle5.a2m 1h3zA/T0209-1h3zA-t2k-local-adpstyle5.al 5.7134e+016.7328e+01 b.34.9.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001