Best Alignments for T0209

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1onoA/T0209-1onoA-t2k-global-adpstyle5.a2m 2.2596e+019.7629e+00 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-t2k-global-adpstyle1.a2m 2.2596e+019.7629e+00 c.2.1.3
a.69.3.1
d.81.1.3
1fpmA/T0209-1fpmA-t2k-local-adpstyle5.a2m 9.7751e+001.0029e+01 c.37.1.10
1fpmA/T0209-1fpmA-t2k-local-adpstyle1.a2m 9.7751e+001.0029e+01 c.37.1.10
1e0uA/1a49A-T0209-fssp-global-adpstyle5.a2m 4.9026e+011.0454e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1dfvA/1nglA-T0209-fssp-local-adpstyle5.a2m 4.7538e+011.1865e+01 1nglA b.60.1.1
1dfvA/1nglA-T0209-fssp-global-adpstyle5.a2m 4.7538e+011.2181e+01 1nglA b.60.1.1
1fpmA/T0209-1fpmA-t04-local-adpstyle1.a2m 9.7751e+001.2300e+01 c.37.1.10
1fpmA/T0209-1fpmA-t04-local-adpstyle5.a2m 9.7751e+001.2300e+01 c.37.1.10
1ixsA/T0209-1ixsA-t2k-global-adpstyle1.a2m 2.5106e+011.4142e+01 a.5.1.1
1ixsA/T0209-1ixsA-t2k-global-adpstyle5.a2m 2.5106e+011.4142e+01 a.5.1.1
1e0uA/1a49A-T0209-fssp-local-adpstyle5.a2m 4.9026e+011.4998e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1fpmA/T0209-1fpmA-t04-global-adpstyle5.a2m 9.7751e+001.5287e+01 c.37.1.10
1fpmA/T0209-1fpmA-t04-global-adpstyle1.a2m 9.7751e+001.5287e+01 c.37.1.10
1ixsA/T0209-1ixsA-t04-global-adpstyle5.a2m 2.5106e+011.8070e+01 a.5.1.1
1ixsA/T0209-1ixsA-t04-global-adpstyle1.a2m 2.5106e+011.8070e+01 a.5.1.1
1onoA/T0209-1onoA-t2k-local-adpstyle5.a2m 2.2596e+012.4955e+01 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-t2k-local-adpstyle1.a2m 2.2596e+012.4955e+01 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-t04-local-adpstyle5.a2m 2.2596e+012.5317e+01 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-t04-local-adpstyle1.a2m 2.2596e+012.5317e+01 c.2.1.3
a.69.3.1
d.81.1.3
1fpmA/T0209-1fpmA-simplesw-adpstyle5.a2m 9.7751e+002.6863e+01 c.37.1.10
1fpmA/T0209-1fpmA-simplesw-adpstyle1.a2m 9.7751e+002.6863e+01 c.37.1.10
1ixsA/T0209-1ixsA-t2k-local-adpstyle1.a2m 2.5106e+012.7960e+01 a.5.1.1
1ixsA/T0209-1ixsA-t2k-local-adpstyle5.a2m 2.5106e+012.7960e+01 a.5.1.1
1fpmA/T0209-1fpmA-t2k-global-adpstyle5.a2m 9.7751e+002.8237e+01 c.37.1.10
1fpmA/T0209-1fpmA-t2k-global-adpstyle1.a2m 9.7751e+002.8237e+01 c.37.1.10
1gu6A/T0209-1gu6A-t2k-global-adpstyle5.a2m 4.0644e+012.9844e+01 a.138.1.3
1gu6A/T0209-1gu6A-t2k-global-adpstyle1.a2m 4.0644e+012.9844e+01 a.138.1.3
1ixsA/T0209-1ixsA-t04-local-adpstyle1.a2m 2.5106e+013.1111e+01 a.5.1.1
1ixsA/T0209-1ixsA-t04-local-adpstyle5.a2m 2.5106e+013.1111e+01 a.5.1.1
1oynA/T0209-1oynA-t2k-local-adpstyle1.a2m 3.0163e+013.4057e+01 a.125.1.1
1oynA/T0209-1oynA-t2k-local-adpstyle5.a2m 3.0163e+013.4057e+01 a.125.1.1
1onoA/T0209-1onoA-t04-global-adpstyle5.a2m 2.2596e+013.5676e+01 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-t04-global-adpstyle1.a2m 2.2596e+013.5676e+01 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-simplesw-adpstyle1.a2m 2.2596e+013.8974e+01 c.2.1.3
a.69.3.1
d.81.1.3
1onoA/T0209-1onoA-simplesw-adpstyle5.a2m 2.2596e+013.8974e+01 c.2.1.3
a.69.3.1
d.81.1.3
1gu6A/T0209-1gu6A-t04-local-adpstyle1.a2m 4.0644e+014.2758e+01 a.138.1.3
1gu6A/T0209-1gu6A-t04-local-adpstyle5.a2m 4.0644e+014.2758e+01 a.138.1.3
1oynA/T0209-1oynA-t04-local-adpstyle5.a2m 3.0163e+014.2823e+01 a.125.1.1
1oynA/T0209-1oynA-t04-local-adpstyle1.a2m 3.0163e+014.2823e+01 a.125.1.1
1gu6A/T0209-1gu6A-t2k-local-adpstyle5.a2m 4.0644e+014.6896e+01 a.138.1.3
1gu6A/T0209-1gu6A-t2k-local-adpstyle1.a2m 4.0644e+014.6896e+01 a.138.1.3
1dfvA/T0209-1dfvA-t2k-local-adpstyle1.a2m 4.7538e+015.5393e+01 1nglA b.60.1.1
1dfvA/T0209-1dfvA-t2k-local-adpstyle5.a2m 4.7538e+015.5393e+01 1nglA b.60.1.1
1l6mA/T0209-1l6mA-t2k-local-adpstyle1.a2m 4.7752e+015.5679e+01 b.60.1.1
1l6mA/T0209-1l6mA-t2k-local-adpstyle5.a2m 4.7752e+015.5679e+01 b.60.1.1
1ixsA/T0209-1ixsA-simplesw-adpstyle5.a2m 2.5106e+015.6865e+01 a.5.1.1
1ixsA/T0209-1ixsA-simplesw-adpstyle1.a2m 2.5106e+015.6865e+01 a.5.1.1
1e0uA/T0209-1e0uA-t2k-local-adpstyle1.a2m 4.9026e+015.7226e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1e0uA/T0209-1e0uA-t2k-local-adpstyle5.a2m 4.9026e+015.7226e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1qh2A/T0209-1qh2A-t2k-global-adpstyle1.a2m 5.6350e+015.8214e+01
1qh2A/T0209-1qh2A-t2k-global-adpstyle5.a2m 5.6350e+015.8214e+01
1e0uA/T0209-1e0uA-t04-local-adpstyle5.a2m 4.9026e+016.1227e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1e0uA/T0209-1e0uA-t04-local-adpstyle1.a2m 4.9026e+016.1227e+01 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1dfvA/T0209-1dfvA-t04-local-adpstyle1.a2m 4.7538e+016.2605e+01 1nglA b.60.1.1
1dfvA/T0209-1dfvA-t04-local-adpstyle5.a2m 4.7538e+016.2605e+01 1nglA b.60.1.1
1l6mA/T0209-1l6mA-t04-local-adpstyle1.a2m 4.7752e+016.2882e+01 b.60.1.1
1l6mA/T0209-1l6mA-t04-local-adpstyle5.a2m 4.7752e+016.2882e+01 b.60.1.1
1gu6A/T0209-1gu6A-t04-global-adpstyle5.a2m 4.0644e+016.5698e+01 a.138.1.3
1gu6A/T0209-1gu6A-t04-global-adpstyle1.a2m 4.0644e+016.5698e+01 a.138.1.3
1qh2A/T0209-1qh2A-t2k-local-adpstyle5.a2m 5.6350e+016.6338e+01
1qh2A/T0209-1qh2A-t2k-local-adpstyle1.a2m 5.6350e+016.6338e+01
1gu6A/T0209-1gu6A-simplesw-adpstyle1.a2m 4.0644e+016.7019e+01 a.138.1.3
1gu6A/T0209-1gu6A-simplesw-adpstyle5.a2m 4.0644e+016.7019e+01 a.138.1.3
1h3zA/T0209-1h3zA-t2k-local-adpstyle5.a2m 5.7134e+016.7328e+01 b.34.9.2
1h3zA/T0209-1h3zA-t2k-local-adpstyle1.a2m 5.7134e+016.7328e+01 b.34.9.2
1qh2A/T0209-1qh2A-t04-global-adpstyle1.a2m 5.6350e+016.9303e+01
1qh2A/T0209-1qh2A-t04-global-adpstyle5.a2m 5.6350e+016.9303e+01
1qh2A/T0209-1qh2A-t04-local-adpstyle1.a2m 5.6350e+016.9538e+01
1qh2A/T0209-1qh2A-t04-local-adpstyle5.a2m 5.6350e+016.9538e+01
1l6mA/T0209-1l6mA-t2k-global-adpstyle1.a2m 4.7752e+017.1386e+01 b.60.1.1
1l6mA/T0209-1l6mA-t2k-global-adpstyle5.a2m 4.7752e+017.1386e+01 b.60.1.1
1h3zA/T0209-1h3zA-t04-local-adpstyle5.a2m 5.7134e+017.1744e+01 b.34.9.2
1h3zA/T0209-1h3zA-t04-local-adpstyle1.a2m 5.7134e+017.1744e+01 b.34.9.2
1oynA/T0209-1oynA-simplesw-adpstyle1.a2m 3.0163e+017.2403e+01 a.125.1.1
1oynA/T0209-1oynA-simplesw-adpstyle5.a2m 3.0163e+017.2403e+01 a.125.1.1
1oynA/T0209-1oynA-t2k-global-adpstyle1.a2m 3.0163e+017.9073e+01 a.125.1.1
1oynA/T0209-1oynA-t2k-global-adpstyle5.a2m 3.0163e+017.9073e+01 a.125.1.1
1oynA/T0209-1oynA-t04-global-adpstyle1.a2m 3.0163e+017.9353e+01 a.125.1.1
1oynA/T0209-1oynA-t04-global-adpstyle5.a2m 3.0163e+017.9353e+01 a.125.1.1
1dfvA/T0209-1dfvA-t2k-global-adpstyle1.a2m 4.7538e+017.9628e+01 1nglA b.60.1.1
1dfvA/T0209-1dfvA-t2k-global-adpstyle5.a2m 4.7538e+017.9628e+01 1nglA b.60.1.1
1qh2A/T0209-1qh2A-simplesw-adpstyle5.a2m 5.6350e+018.5446e+01
1qh2A/T0209-1qh2A-simplesw-adpstyle1.a2m 5.6350e+018.5446e+01
1l6mA/T0209-1l6mA-t04-global-adpstyle5.a2m 4.7752e+018.6005e+01 b.60.1.1
1l6mA/T0209-1l6mA-t04-global-adpstyle1.a2m 4.7752e+018.6005e+01 b.60.1.1
1dfvA/T0209-1dfvA-t04-global-adpstyle5.a2m 4.7538e+019.3260e+01 1nglA b.60.1.1
1dfvA/T0209-1dfvA-t04-global-adpstyle1.a2m 4.7538e+019.3260e+01 1nglA b.60.1.1
1h3zA/T0209-1h3zA-t2k-global-adpstyle1.a2m 5.7134e+011.0299e+02 b.34.9.2
1h3zA/T0209-1h3zA-t2k-global-adpstyle5.a2m 5.7134e+011.0299e+02 b.34.9.2
1e0uA/T0209-1e0uA-simplesw-adpstyle1.a2m 4.9026e+011.0338e+02 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1e0uA/T0209-1e0uA-simplesw-adpstyle5.a2m 4.9026e+011.0338e+02 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1dfvA/T0209-1dfvA-simplesw-adpstyle5.a2m 4.7538e+011.0885e+02 1nglA b.60.1.1
1dfvA/T0209-1dfvA-simplesw-adpstyle1.a2m 4.7538e+011.0885e+02 1nglA b.60.1.1
1l6mA/T0209-1l6mA-simplesw-adpstyle1.a2m 4.7752e+011.0918e+02 b.60.1.1
1l6mA/T0209-1l6mA-simplesw-adpstyle5.a2m 4.7752e+011.0918e+02 b.60.1.1
1e0uA/T0209-1e0uA-t04-global-adpstyle5.a2m 4.9026e+011.1861e+02 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1e0uA/T0209-1e0uA-t04-global-adpstyle1.a2m 4.9026e+011.1861e+02 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1e0uA/T0209-1e0uA-t2k-global-adpstyle1.a2m 4.9026e+011.1881e+02 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1e0uA/T0209-1e0uA-t2k-global-adpstyle5.a2m 4.9026e+011.1881e+02 1a49A c.1.12.1
c.49.1.1
b.58.1.1
1h3zA/T0209-1h3zA-simplesw-adpstyle5.a2m 5.7134e+011.2043e+02 b.34.9.2
1h3zA/T0209-1h3zA-simplesw-adpstyle1.a2m 5.7134e+011.2043e+02 b.34.9.2
1h3zA/T0209-1h3zA-t04-global-adpstyle1.a2m 5.7134e+011.2659e+02 b.34.9.2
1h3zA/T0209-1h3zA-t04-global-adpstyle5.a2m 5.7134e+011.2659e+02 b.34.9.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001