Best Alignments for T0209

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1chwA/1bi5A-T0209-fssp-local-adpstyle5.a2m 1chwA/1bi5A-T0209-fssp-local-adpstyle5.al 1.1842e+014.5474e+00 1bi5A c.95.1.2
1i89A/T0209-1i89A-t04-local-adpstyle5.a2m 1i89A/T0209-1i89A-t04-local-adpstyle5.al 1.3900e+019.4356e+00 c.95.1.2
1i8bA/T0209-1i8bA-t04-local-adpstyle1.a2m 1i8bA/T0209-1i8bA-t04-local-adpstyle1.al 1.3900e+019.4471e+00 c.95.1.2
1jwxA/T0209-1jwxA-t04-local-adpstyle1.a2m 1jwxA/T0209-1jwxA-t04-local-adpstyle1.al 1.3940e+019.3993e+00 c.95.1.2
1nmmA/T0209-1nmmA-t2k-global-adpstyle5.a2m 1nmmA/T0209-1nmmA-t2k-global-adpstyle5.al 1.8352e+018.3854e+00 d.2.1.2
1nldH/1igtB-T0209-fssp-local-adpstyle5.a2m 1nldH/1igtB-T0209-fssp-local-adpstyle5.al 2.1623e+017.3904e+00 1igtB b.1.1.2
b.1.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001