CreatePredAlphaCost pred_alpha2k alpha11 T0207.t2k.alpha.rdb 2 alpha alpha_prev sum 
CreatePredAlphaCost pred_alpha04 alpha11 T0207.t04.alpha.rdb 2 alpha alpha_prev sum 

SetCost wet6.5 3 near_backbone 3 way_back 3 dry5 9 dry6.5 12 dry8 8 dry12 2 \
	phobic_fit 5 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 25  backbone_clashes 2 \
	break 150  \
	pred_alpha2k 5 \
	pred_alpha04 5 \
	constraints 1 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.4 \
	hbond_geom_beta_pair 1 \
	known_ssbond 0.5	
	
// Add the following for extra-cellular proteins:

#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.


include T0207.t2k.dssp-ehl2.constraints
include T0207.t2k.str2.constraints
include T0207.t04.dssp-ehl2.constraints
include T0207.t04.str2.constraints

SSBond C11 C14