CreatePredAlphaCost pred_alpha2k alpha11 T0207.t2k.alpha.rdb 2 alpha alpha_prev sum 
CreatePredAlphaCost pred_alpha04 alpha11 T0207.t04.alpha.rdb 2 alpha alpha_prev sum 

SetCost wet6.5 4 near_backbone 6 way_back 6 dry5 10 dry6.5 10 dry8 10 dry12 2 \
	phobic_fit 5 \
	sidechain 2 \
	bystroff 5 \
	soft_clashes 80  backbone_clashes 2 \
	break 200  \
	pred_alpha2k 5 \
	pred_alpha04 5 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.5 \
	hbond_geom_beta_pair 2 \
	maybe_ssbond 0.5 \
	known_ssbond 0.5	
	
// Add the following for extra-cellular proteins: