# TARGET T0207 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0207.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 49 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 M 0.314 0.006 0.003 0.004 0.180 0.493 2 A 0.790 0.021 0.001 0.001 0.016 0.172 3 L 0.956 0.002 0.001 0.001 0.004 0.038 4 T 0.974 0.001 0.001 0.001 0.004 0.019 5 L 0.960 0.004 0.001 0.001 0.006 0.029 6 Y 0.803 0.003 0.007 0.002 0.049 0.137 7 Q 0.493 0.028 0.005 0.002 0.151 0.321 8 R 0.070 0.017 0.007 0.002 0.828 0.076 9 D 0.005 0.001 0.010 0.005 0.931 0.048 10 D 0.006 0.003 0.013 0.016 0.915 0.047 11 C 0.034 0.016 0.022 0.072 0.806 0.050 12 H 0.084 0.034 0.013 0.277 0.245 0.346 13 L 0.071 0.083 0.026 0.552 0.105 0.163 14 C 0.022 0.003 0.014 0.854 0.036 0.071 15 D 0.002 0.001 0.005 0.985 0.004 0.004 16 Q 0.001 0.001 0.004 0.989 0.004 0.002 17 A 0.001 0.001 0.002 0.993 0.002 0.001 18 V 0.002 0.001 0.001 0.992 0.003 0.002 19 E 0.001 0.001 0.002 0.990 0.005 0.002 20 A 0.001 0.001 0.002 0.980 0.009 0.007 21 L 0.001 0.001 0.003 0.962 0.017 0.016 22 A 0.003 0.001 0.009 0.906 0.046 0.035 23 Q 0.004 0.001 0.014 0.782 0.084 0.115 24 A 0.015 0.003 0.023 0.609 0.140 0.210 25 R 0.085 0.010 0.033 0.309 0.224 0.339 26 A 0.122 0.007 0.025 0.095 0.283 0.468 27 G 0.153 0.006 0.011 0.033 0.201 0.596 28 A 0.288 0.002 0.004 0.010 0.101 0.595 29 F 0.661 0.005 0.002 0.009 0.045 0.277 30 F 0.875 0.002 0.001 0.004 0.016 0.101 31 S 0.936 0.003 0.001 0.003 0.010 0.047 32 V 0.938 0.007 0.001 0.001 0.009 0.045 33 F 0.730 0.019 0.005 0.003 0.188 0.055 34 I 0.202 0.008 0.024 0.006 0.633 0.127 35 D 0.019 0.005 0.013 0.003 0.856 0.104 36 D 0.007 0.035 0.007 0.006 0.709 0.236 37 D 0.002 0.003 0.001 0.007 0.099 0.888 38 A 0.001 0.001 0.020 0.911 0.046 0.022 39 A 0.001 0.001 0.022 0.931 0.040 0.006 40 L 0.001 0.001 0.040 0.919 0.036 0.002 41 E 0.003 0.001 0.054 0.900 0.035 0.007 42 S 0.005 0.001 0.054 0.888 0.045 0.008 43 A 0.008 0.002 0.042 0.843 0.076 0.030 44 Y 0.020 0.004 0.029 0.686 0.117 0.144 45 G 0.044 0.009 0.033 0.246 0.193 0.476 46 L 0.235 0.008 0.029 0.115 0.188 0.426 47 R 0.550 0.014 0.012 0.041 0.102 0.281 48 V 0.754 0.007 0.004 0.014 0.048 0.173 49 P 0.839 0.002 0.003 0.006 0.029 0.120 50 V 0.934 0.003 0.003 0.003 0.017 0.041 51 L 0.968 0.002 0.001 0.001 0.011 0.017 52 R 0.929 0.003 0.001 0.001 0.047 0.020 53 D 0.585 0.009 0.004 0.004 0.338 0.061 54 P 0.029 0.001 0.006 0.009 0.898 0.056 55 M 0.016 0.004 0.028 0.070 0.842 0.039 56 G 0.186 0.034 0.032 0.132 0.451 0.165 57 R 0.349 0.023 0.057 0.162 0.257 0.151 58 E 0.479 0.013 0.036 0.103 0.145 0.225 59 L 0.557 0.043 0.069 0.061 0.158 0.112 60 D 0.243 0.006 0.035 0.022 0.327 0.367 61 W 0.207 0.011 0.019 0.008 0.293 0.461 62 P 0.142 0.035 0.012 0.009 0.231 0.570 63 F 0.078 0.051 0.005 0.011 0.180 0.674 64 D 0.017 0.009 0.003 0.026 0.126 0.819 65 A 0.001 0.001 0.009 0.970 0.012 0.008 66 P 0.001 0.001 0.003 0.985 0.009 0.003 67 R 0.001 0.001 0.005 0.992 0.003 0.001 68 L 0.001 0.001 0.003 0.994 0.003 0.001 69 R 0.001 0.001 0.006 0.990 0.003 0.001 70 A 0.001 0.001 0.015 0.965 0.016 0.003 71 W 0.001 0.001 0.014 0.923 0.037 0.026 72 L 0.001 0.014 0.017 0.886 0.051 0.030 73 D 0.003 0.004 0.027 0.727 0.143 0.096 74 A 0.007 0.001 0.028 0.356 0.277 0.329 75 A 0.011 0.007 0.033 0.194 0.313 0.441 76 P 0.009 0.012 0.020 0.093 0.224 0.643 77 H 0.004 0.008 0.018 0.105 0.130 0.735 78 A 0.001 0.001 0.002 0.010 0.035 0.952