SetCost wet6.5 3 near_backbone 3 way_back 3 dry5 5 dry6.5 10 dry8 12 dry12 2 \
	phobic_fit 2 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 20  backbone_clashes 2 \
	break 30  \
	pred_alpha2 5 \
	constraints 10 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.6 \
	hbond_geom_beta_pair 2

// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.

include T0205.t2k.dssp-ehl2.constraints
include T0205.t2k.str2.constraints
include T0205.t2k.stride-ebghtl.constraints
include T0205.t2k.alpha.constraints

# try to fix up initial strand.
Hbond N12.O	S26.N
Hbond A14.N	Q24.O	# 2.80988
Hbond A14.O	Q24.N	# 2.84953
Hbond D16.N	R22.O	# 2.92149

Hbond N21.O	E50.N	2.0	# 2.79897
Hbond I23.N	E50.O	2.0	# 2.78206
Hbond I23.O	S52.N	2.0	# 3.03505
Hbond V25.N	S52.O	2.0	# 2.77787


# try to maintain final antiparallel strands

hbond	E76.N	T103.O	0.5
hbond	E76.O	T103.N	0.5
hbond	K78.N	E101.O	0.5
hbond	K78.O	E101.N	0.5
hbond	M80.N	K99.O	0.5
hbond	M80.O	K99.N	0.5
hbond	S82.N	K97.O	0.5
hbond	S82.O	K97.N	0.5
hbond	V84.N	V95.O	0.5
hbond	V84.O	V95.N	0.5

Hbond V49.N	I102.O	1.0
Hbond V49.O	I102.N	1.0
Hbond L51.N	I100.O	1.0
Hbond L51.O	I100.N	1.0
Hbond A53.N	A98.O	1.0
Hbond A53.O	A98.N	1.0