Best Alignments for T0204

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1hxpA/T0204-1hxpA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hxpA/T0204-1hxpA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1884e-552.9097e-75 1guqA d.13.1.2
1emsA/T0204-1emsA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1emsA/T0204-1emsA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.6783e-116.2895e-17 1emsA d.160.1.1
d.13.1.1
1kpf/T0204-1kpf-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kpf/T0204-1kpf-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.3526e-115.2009e-16 1kpf d.13.1.1
1fit/T0204-1fit-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fit/T0204-1fit-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.5751e-101.7123e-15 1fit d.13.1.1
1rzyA/T0204-1rzyA-t04-global-adpstyle5.a2m 1rzyA/T0204-1rzyA-t04-global-adpstyle5.al 5.3196e-067.2253e-11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001