Best Alignments for T0203

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rxxA/T0203-1rxxA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1rxxA/T0203-1rxxA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.4825e-062.4008e-10
1jdw/T0203-1jdw-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jdw/T0203-1jdw-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.2816e-058.3723e-10 1jdw d.126.1.2
1s9rA/T0203-1s9rA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s9rA/T0203-1s9rA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.7193e-041.8968e-07
1lxyA/T0203-1lxyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lxyA/T0203-1lxyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.7206e-041.3161e-07
1h70A/T0203-1h70A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1h70A/T0203-1h70A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.0357e-035.7846e-07 1h70A d.126.1.3
1he2A/T0203-1he2A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1he2A/T0203-1he2A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.3596e+004.7626e-01 1he2A c.2.1.2
1qjcA/T0203-1qjcA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qjcA/T0203-1qjcA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.5518e+007.8657e-01 1b6tA c.26.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001