Best Alignments for T0202

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1pfkA/T0202-1pfkA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pfkA/T0202-1pfkA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.1219e-023.7182e-04 3pfk c.89.1.1
2tysB/T0202-2tysB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2tysB/T0202-2tysB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.5790e-018.4199e-03 2tysB c.79.1.1
1k8yB/T0202-1k8yB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1k8yB/T0202-1k8yB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.1297e-011.3066e-02 c.79.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001