SetCost wet6.5 3 near_backbone 3 way_back 3 dry5 5 dry6.5 6 dry8 5 dry12 2 \
	phobic_fit 2 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 10  backbone_clashes 2 \
	break 30  \
	pred_alpha2 5 \
	constraints 10 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 1 \
	hbond_geom_beta_pair 1

// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.

# from T0201.t04.dssp-ehl2.constraints
# StrandConstraint	K3	V4	0.666
StrandConstraint	K3	T7	0.2
StrandConstraint	F10	V13	0.756
HelixConstraint 	C23	E40	0.6594
StrandConstraint	Y51	F56	0.6247
HelixConstraint 	N61	K80	0.6595
StrandConstraint	I85	I90	0.6521


# from T0201.t04-thin30.mi.constraints
# Constraint V33.CB K53.CB -10. 7.0 12.0 0.128566
Constraint A39.CB L59.CB -10. 7.0 12.0 0.123811
Constraint T7.CB E58.CB -10. 7.0 12.0 0.109735
# Constraint S73.CB G93.CA -10. 7.0 12.0 0.108975

# from T0201.t04-thin50.mi.constraints
Constraint H32.CB S73.CB -10. 7.0 12.0 0.23
# Constraint Q31.CB K41.CB -10. 7.0 12.0 0.108499

# from T0201.t04-thin62.mi.constraints
# Constraint H32.CB S73.CB -10. 7.0 12.0 0.122396 # merged with constraint above
Constraint L29.CB S73.CB -10. 7.0 12.0 0.116535
Constraint L28.CB L77.CB -10. 7.0 12.0 0.106315
Constraint K41.CB A68.CB -10. 7.0 12.0 0.105665


#from alignments
Hbond	A17.N	L52.O	1.0	# 2.65692
Hbond	A17.O	L52.N	1.0	# 3.339

# from try4-opt2
Hbond	M1.N	E12.O	1.0	# 2.80953
Hbond	M1.O	E12.N	1.0	# 2.8593
Hbond	K3.N	F10.O	1.0	# 2.91795
Hbond	K3.O	F10.N	1.0	# 2.98312


Hbond	S9.N	V89.O	0.5
Hbond	S9.O	V89.N	0.5
Hbond	F11.N	V87.O	1.0	# 2.98593
Hbond	F11.O	V87.N	1.0	# 2.94133
Hbond	V13.N	I85.O	1.0	# 2.86633
Hbond	V13.O	I85.N	1.0	# 2.87016




# Trying to form parallel sheet
Constraint L52.CB	I85.CB	0	5.1	7	1.0
Hbond		L52.O	R86.N				1.0
Constraint K53.CB	R86.CB	0	5.1	7	1.0
Hbond		V54.N	R86.O				1.0
Constraint V54.CB	V87.CB	0	5.1	7	1.0

Constraint A43.CB	V54.CB	0	5.1	7	1.0
Hbond		A43.O	K53.N				1.0
Constraint K44.CB	K53.CB	0	5.1	7	1.0
Hbond		I45.N	K53.O				1.0
Constraint I45.CB	L52.CB	0	5.1	7	1.0