Best Alignments for T0201

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1alvA/1alvA-T0201-fssp-global-adpstyle5.a2m 9.3988e+001.0990e+00 1alvA a.39.1.8
3fruA/T0201-3fruA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2150e+001.3308e+00 1agdA d.19.1.1
b.1.1.2
3fruA/T0201-3fruA-local-str2-1.5-adpstyle5.a2m 5.2150e+001.3949e+00 1agdA d.19.1.1
b.1.1.2
3fruA/1agdA-T0201-fssp-local-adpstyle5.a2m 5.2150e+001.9899e+00 1agdA d.19.1.1
b.1.1.2
1aj5A/1alvA-T0201-fssp-global-adpstyle5.a2m 2.0136e+012.0737e+00 1alvA a.39.1.8
1dviA/1alvA-T0201-fssp-global-adpstyle5.a2m 2.3549e+012.3627e+00 1alvA a.39.1.8
1df0B/1alvA-T0201-fssp-global-adpstyle5.a2m 2.4333e+012.4281e+00 1alvA a.39.1.8
3fruA/1agdA-T0201-fssp-global-adpstyle5.a2m 5.2150e+002.4591e+00 1agdA d.19.1.1
b.1.1.2
1kfuS/T0201-1kfuS-local-str2-1.5-adpstyle5.a2m 5.2872e+003.0372e+00 a.39.1.8
1alvA/1alvA-T0201-fssp-local-adpstyle5.a2m 9.3988e+003.2364e+00 1alvA a.39.1.8
1kfuS/T0201-1kfuS-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2872e+003.3466e+00 a.39.1.8
3fruA/T0201-3fruA-global-str2-1.5-adpstyle5.a2m 5.2150e+004.5597e+00 1agdA d.19.1.1
b.1.1.2
1bupA/1ba1-T0201-fssp-global-adpstyle5.a2m 2.0426e+014.7594e+00 1ba1 c.55.1.1
1kay/1ba1-T0201-fssp-global-adpstyle5.a2m 2.0558e+014.7850e+00 1ba1 c.55.1.1
1kfuS/T0201-1kfuS-simplesw-adpstyle1.a2m 5.2872e+004.8828e+00 a.39.1.8
1kfuS/T0201-1kfuS-simplesw-adpstyle5.a2m 5.2872e+004.8828e+00 a.39.1.8
1kfuS/T0201-1kfuS-local-adpstyle5.a2m 5.2872e+005.1734e+00 a.39.1.8
1kfuS/T0201-1kfuS-local-adpstyle1.a2m 5.2872e+005.1734e+00 a.39.1.8
1ba1/1ba1-T0201-fssp-global-adpstyle5.a2m 2.3058e+015.2652e+00 1ba1 c.55.1.1
1kfuS/T0201-1kfuS-global-str2-1.5-adpstyle5.a2m 5.2872e+005.2675e+00 a.39.1.8
1bupA/T0201-1bupA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0426e+016.0651e+00 1ba1 c.55.1.1
1aj5A/1alvA-T0201-fssp-local-adpstyle5.a2m 2.0136e+016.1068e+00 1alvA a.39.1.8
1qr2A/1d4aA-T0201-fssp-global-adpstyle5.a2m 2.1970e+016.5496e+00 1d4aA c.23.5.3
1alvA/T0201-1alvA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 9.3988e+006.5734e+00 1alvA a.39.1.8
1kfuS/T0201-1kfuS-global-adpstyle1.a2m 5.2872e+006.6377e+00 a.39.1.8
1kfuS/T0201-1kfuS-global-adpstyle5.a2m 5.2872e+006.6377e+00 a.39.1.8
1dviA/1alvA-T0201-fssp-local-adpstyle5.a2m 2.3549e+016.9579e+00 1alvA a.39.1.8
1kay/T0201-1kay-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0558e+016.9839e+00 1ba1 c.55.1.1
3fruA/T0201-3fruA-simplesw-adpstyle5.a2m 5.2150e+007.0038e+00 1agdA d.19.1.1
b.1.1.2
3fruA/T0201-3fruA-simplesw-adpstyle1.a2m 5.2150e+007.0038e+00 1agdA d.19.1.1
b.1.1.2
1bupA/1ba1-T0201-fssp-local-adpstyle5.a2m 2.0426e+017.1410e+00 1ba1 c.55.1.1
1df0B/1alvA-T0201-fssp-local-adpstyle5.a2m 2.4333e+017.1504e+00 1alvA a.39.1.8
1kay/1ba1-T0201-fssp-local-adpstyle5.a2m 2.0558e+017.1795e+00 1ba1 c.55.1.1
3fruA/T0201-3fruA-local-adpstyle5.a2m 5.2150e+007.1860e+00 1agdA d.19.1.1
b.1.1.2
3fruA/T0201-3fruA-local-adpstyle1.a2m 5.2150e+007.1860e+00 1agdA d.19.1.1
b.1.1.2
1alvA/T0201-1alvA-global-adpstyle5.a2m 9.3988e+007.2980e+00 1alvA a.39.1.8
1alvA/T0201-1alvA-global-adpstyle1.a2m 9.3988e+007.2980e+00 1alvA a.39.1.8
1ba1/T0201-1ba1-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.3058e+017.4390e+00 1ba1 c.55.1.1
1qr2A/1d4aA-T0201-fssp-local-adpstyle5.a2m 2.1970e+017.5112e+00 1d4aA c.23.5.3
1ba1/1ba1-T0201-fssp-local-adpstyle5.a2m 2.3058e+017.9000e+00 1ba1 c.55.1.1
1alvA/T0201-1alvA-simplesw-adpstyle1.a2m 9.3988e+008.9716e+00 1alvA a.39.1.8
1alvA/T0201-1alvA-simplesw-adpstyle5.a2m 9.3988e+008.9716e+00 1alvA a.39.1.8
1alvA/T0201-1alvA-local-adpstyle1.a2m 9.3988e+009.3103e+00 1alvA a.39.1.8
1alvA/T0201-1alvA-local-adpstyle5.a2m 9.3988e+009.3103e+00 1alvA a.39.1.8
1aj5A/T0201-1aj5A-global-adpstyle1.a2m 2.0136e+011.1647e+01 1alvA a.39.1.8
1aj5A/T0201-1aj5A-global-adpstyle5.a2m 2.0136e+011.1647e+01 1alvA a.39.1.8
1alvA/T0201-1alvA-local-str2-1.5-adpstyle5.a2m 9.3988e+001.2062e+01 1alvA a.39.1.8
3fruA/T0201-3fruA-global-adpstyle1.a2m 5.2150e+001.2891e+01 1agdA d.19.1.1
b.1.1.2
3fruA/T0201-3fruA-global-adpstyle5.a2m 5.2150e+001.2891e+01 1agdA d.19.1.1
b.1.1.2
1alvA/T0201-1alvA-global-str2-1.5-adpstyle5.a2m 9.3988e+001.4778e+01 1alvA a.39.1.8
1df0B/T0201-1df0B-global-adpstyle1.a2m 2.4333e+011.6045e+01 1alvA a.39.1.8
1df0B/T0201-1df0B-global-adpstyle5.a2m 2.4333e+011.6045e+01 1alvA a.39.1.8
1kfuS/1kfuS-T0201-local-adpstyle1.a2m 5.2872e+001.6246e+01 a.39.1.8
1kfuS/1kfuS-T0201-local-adpstyle5.a2m 5.2872e+001.6246e+01 a.39.1.8
3fruA/3fruA-T0201-global-adpstyle5.a2m 5.2150e+001.7073e+01 1agdA d.19.1.1
b.1.1.2
3fruA/3fruA-T0201-global-adpstyle1.a2m 5.2150e+001.7073e+01 1agdA d.19.1.1
b.1.1.2
1kfuS/1kfuS-T0201-global-adpstyle5.a2m 5.2872e+001.7318e+01 a.39.1.8
1kfuS/1kfuS-T0201-global-adpstyle1.a2m 5.2872e+001.7318e+01 a.39.1.8
3fruA/3fruA-T0201-local-adpstyle5.a2m 5.2150e+001.7598e+01 1agdA d.19.1.1
b.1.1.2
3fruA/3fruA-T0201-local-adpstyle1.a2m 5.2150e+001.7598e+01 1agdA d.19.1.1
b.1.1.2
1dviA/T0201-1dviA-global-adpstyle5.a2m 2.3549e+011.8195e+01 1alvA a.39.1.8
1dviA/T0201-1dviA-global-adpstyle1.a2m 2.3549e+011.8195e+01 1alvA a.39.1.8
1aj5A/T0201-1aj5A-simplesw-adpstyle1.a2m 2.0136e+011.9960e+01 1alvA a.39.1.8
1aj5A/T0201-1aj5A-simplesw-adpstyle5.a2m 2.0136e+011.9960e+01 1alvA a.39.1.8
1aj5A/T0201-1aj5A-local-adpstyle1.a2m 2.0136e+012.0819e+01 1alvA a.39.1.8
1aj5A/T0201-1aj5A-local-adpstyle5.a2m 2.0136e+012.0819e+01 1alvA a.39.1.8
1qr2A/T0201-1qr2A-local-adpstyle5.a2m 2.1970e+012.2971e+01 1d4aA c.23.5.3
1qr2A/T0201-1qr2A-local-adpstyle1.a2m 2.1970e+012.2971e+01 1d4aA c.23.5.3
1dviA/T0201-1dviA-simplesw-adpstyle5.a2m 2.3549e+012.3801e+01 1alvA a.39.1.8
1dviA/T0201-1dviA-simplesw-adpstyle1.a2m 2.3549e+012.3801e+01 1alvA a.39.1.8
1qr2A/T0201-1qr2A-simplesw-adpstyle1.a2m 2.1970e+012.4417e+01 1d4aA c.23.5.3
1qr2A/T0201-1qr2A-simplesw-adpstyle5.a2m 2.1970e+012.4417e+01 1d4aA c.23.5.3
1df0B/T0201-1df0B-simplesw-adpstyle5.a2m 2.4333e+012.4666e+01 1alvA a.39.1.8
1df0B/T0201-1df0B-simplesw-adpstyle1.a2m 2.4333e+012.4666e+01 1alvA a.39.1.8
1kay/1kay-T0201-global-adpstyle5.a2m 2.0558e+012.4829e+01 1ba1 c.55.1.1
1kay/1kay-T0201-global-adpstyle1.a2m 2.0558e+012.4829e+01 1ba1 c.55.1.1
1dviA/T0201-1dviA-local-adpstyle5.a2m 2.3549e+012.4835e+01 1alvA a.39.1.8
1dviA/T0201-1dviA-local-adpstyle1.a2m 2.3549e+012.4835e+01 1alvA a.39.1.8
1df0B/T0201-1df0B-local-adpstyle1.a2m 2.4333e+012.5753e+01 1alvA a.39.1.8
1df0B/T0201-1df0B-local-adpstyle5.a2m 2.4333e+012.5753e+01 1alvA a.39.1.8
1alvA/1alvA-T0201-local-adpstyle1.a2m 9.3988e+002.5977e+01 1alvA a.39.1.8
1alvA/1alvA-T0201-local-adpstyle5.a2m 9.3988e+002.5977e+01 1alvA a.39.1.8
1bupA/1bupA-T0201-global-adpstyle5.a2m 2.0426e+012.7912e+01 1ba1 c.55.1.1
1bupA/1bupA-T0201-global-adpstyle1.a2m 2.0426e+012.7912e+01 1ba1 c.55.1.1
1alvA/1alvA-T0201-global-adpstyle1.a2m 9.3988e+002.8732e+01 1alvA a.39.1.8
1alvA/1alvA-T0201-global-adpstyle5.a2m 9.3988e+002.8732e+01 1alvA a.39.1.8
1ba1/1ba1-T0201-global-adpstyle1.a2m 2.3058e+013.1144e+01 1ba1 c.55.1.1
1ba1/1ba1-T0201-global-adpstyle5.a2m 2.3058e+013.1144e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-local-str2-1.5-adpstyle5.a2m 2.0426e+013.8280e+01 1ba1 c.55.1.1
1kay/T0201-1kay-local-str2-1.5-adpstyle5.a2m 2.0558e+014.0434e+01 1ba1 c.55.1.1
1qr2A/T0201-1qr2A-global-adpstyle1.a2m 2.1970e+014.2430e+01 1d4aA c.23.5.3
1qr2A/T0201-1qr2A-global-adpstyle5.a2m 2.1970e+014.2430e+01 1d4aA c.23.5.3
1kay/1kay-T0201-local-adpstyle5.a2m 2.0558e+014.2994e+01 1ba1 c.55.1.1
1kay/1kay-T0201-local-adpstyle1.a2m 2.0558e+014.2994e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-local-adpstyle5.a2m 2.0426e+014.4588e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-local-adpstyle1.a2m 2.0426e+014.4588e+01 1ba1 c.55.1.1
1kay/T0201-1kay-local-adpstyle5.a2m 2.0558e+014.4760e+01 1ba1 c.55.1.1
1kay/T0201-1kay-local-adpstyle1.a2m 2.0558e+014.4760e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-simplesw-adpstyle5.a2m 2.0426e+014.4950e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-simplesw-adpstyle1.a2m 2.0426e+014.4950e+01 1ba1 c.55.1.1
1kay/T0201-1kay-simplesw-adpstyle5.a2m 2.0558e+014.5094e+01 1ba1 c.55.1.1
1kay/T0201-1kay-simplesw-adpstyle1.a2m 2.0558e+014.5094e+01 1ba1 c.55.1.1
1bupA/1bupA-T0201-local-adpstyle1.a2m 2.0426e+014.5987e+01 1ba1 c.55.1.1
1bupA/1bupA-T0201-local-adpstyle5.a2m 2.0426e+014.5987e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-local-adpstyle1.a2m 2.3058e+014.9177e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-local-adpstyle5.a2m 2.3058e+014.9177e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-simplesw-adpstyle1.a2m 2.3058e+014.9548e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-simplesw-adpstyle5.a2m 2.3058e+014.9548e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-local-str2-1.5-adpstyle5.a2m 2.3058e+015.0714e+01 1ba1 c.55.1.1
1ba1/1ba1-T0201-local-adpstyle5.a2m 2.3058e+015.1372e+01 1ba1 c.55.1.1
1ba1/1ba1-T0201-local-adpstyle1.a2m 2.3058e+015.1372e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-global-str2-1.5-adpstyle5.a2m 2.0426e+015.5111e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-global-adpstyle5.a2m 2.0426e+015.5909e+01 1ba1 c.55.1.1
1bupA/T0201-1bupA-global-adpstyle1.a2m 2.0426e+015.5909e+01 1ba1 c.55.1.1
1kay/T0201-1kay-global-adpstyle5.a2m 2.0558e+015.6680e+01 1ba1 c.55.1.1
1kay/T0201-1kay-global-adpstyle1.a2m 2.0558e+015.6680e+01 1ba1 c.55.1.1
1kay/T0201-1kay-global-str2-1.5-adpstyle5.a2m 2.0558e+015.7360e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-global-adpstyle5.a2m 2.3058e+016.2018e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-global-adpstyle1.a2m 2.3058e+016.2018e+01 1ba1 c.55.1.1
1ba1/T0201-1ba1-global-str2-1.5-adpstyle5.a2m 2.3058e+016.2997e+01 1ba1 c.55.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001