Best Alignments for T0200

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1hp1A/T0200-1hp1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hp1A/T0200-1hp1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.0494e-056.3399e-21 d.114.1.1
d.159.1.2
1ush/T0200-1ush-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ush/T0200-1ush-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.3785e-056.1296e-21 1ush d.114.1.1
d.159.1.2
1h5yA/T0200-1h5yA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1h5yA/T0200-1h5yA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3395e-012.8413e-04 c.1.2.1
1jztA/T0200-1jztA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jztA/T0200-1jztA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.8226e-012.9186e-03 c.104.1.1
1vkfA/T0200-1vkfA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vkfA/T0200-1vkfA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9867e-012.2410e-03
1thfD/T0200-1thfD-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1thfD/T0200-1thfD-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.6494e-013.6884e-03 1thfD c.1.2.1
1kbpA/T0200-1kbpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kbpA/T0200-1kbpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.5166e-011.8088e-05 4kbpA b.1.12.1
d.159.1.1
1vh7A/T0200-1vh7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vh7A/T0200-1vh7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.7820e-011.6408e-02 c.1.2.1
1h1yA/T0200-1h1yA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1h1yA/T0200-1h1yA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.3255e-014.0622e-03 c.1.2.2
1j8mF/T0200-1j8mF-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1j8mF/T0200-1j8mF-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.3890e-011.0720e-02 1ng1 a.24.13.1
c.37.1.10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001