Best Alignments for T0198

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1m6nA/T0198-1m6nA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1m6nA/T0198-1m6nA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.4673e+007.6344e-01 c.37.1.19
a.172.1.1
a.162.1.1
1mfrA/2fha-T0198-fssp-local-adpstyle5.a2m 1mfrA/2fha-T0198-fssp-local-adpstyle5.al 8.7050e+002.4808e+00 2fha a.25.1.1
256bA/T0198-256bA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 256bA/T0198-256bA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1210e+011.6822e+00 256bA a.24.3.1
1io7A/T0198-1io7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1io7A/T0198-1io7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6416e+017.9389e-01 1f4tA a.104.1.1
1oshA/T0198-1oshA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1oshA/T0198-1oshA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9158e+015.9676e-01 a.123.1.1
1m6tA/T0198-1m6tA-t2k-global-adpstyle5.a2m 1m6tA/T0198-1m6tA-t2k-global-adpstyle5.al 2.2328e+011.8305e+01 a.24.3.1
1v4eA/T0198-1v4eA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1v4eA/T0198-1v4eA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3598e+013.9871e+00 a.128.1.1
1g7oA/T0198-1g7oA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g7oA/T0198-1g7oA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.4483e+015.7148e-01 1g7oA a.45.1.1
c.47.1.5
1keyA/T0198-1keyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1keyA/T0198-1keyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5365e+011.1418e+00 a.118.16.1
1pnsP/T0198-1pnsP-t2k-global-adpstyle1.a2m 1pnsP/T0198-1pnsP-t2k-global-adpstyle1.al 2.6833e+012.4892e+01 i.1.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001