Best Alignments for T0197

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gm6A/T0197-1gm6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gm6A/T0197-1gm6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.0766e+003.8013e-02 b.60.1.1
1d8hA/T0197-1d8hA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1d8hA/T0197-1d8hA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.6512e+006.9750e-02 1d8iA d.63.1.1
1cjxA/T0197-1cjxA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1cjxA/T0197-1cjxA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.8465e+007.7328e-01 1cjxA d.32.1.3
1ewjA/T0197-1ewjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ewjA/T0197-1ewjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.7886e+005.0927e-01 1ecsA d.32.1.2
1ew3A/T0197-1ew3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ew3A/T0197-1ew3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.4804e+005.1336e-01 1mup b.60.1.1
1l9aA/T0197-1l9aA-t2k-global-adpstyle5.a2m 1l9aA/T0197-1l9aA-t2k-global-adpstyle5.al 9.7279e+005.4656e+00 d.201.1.1
1ku9A/T0197-1ku9A-t04-global-adpstyle1.a2m 1ku9A/T0197-1ku9A-t04-global-adpstyle1.al 1.1101e+015.2127e+00 a.4.5.36
1f1xA/T0197-1f1xA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f1xA/T0197-1f1xA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3264e+011.8147e+00 d.32.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001