SetCost wet6.5 6 near_backbone 3 way_back 3 dry5 10 dry6.5 12 dry8 10 dry12 2 \
	phobic_fit 2 \
	sidechain 4 \
	bystroff 5 \
	soft_clashes 30  backbone_clashes 2 \
	break 50  \
	pred_alpha2 5 \
	constraints 5 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 1 \
	hbond_geom_beta_pair 2

// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.


StrandConstraint	H2	H7	2.0	// make His tag be extended.