Best Alignments for T0196

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1exmA/T0196-1exmA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1exmA/T0196-1exmA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9282e-205.2458e-26 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1efcA/T0196-1efcA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1efcA/T0196-1efcA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.7458e-203.8621e-26 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0196-1jnyA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jnyA/T0196-1jnyA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8816e-203.5365e-26 b.43.3.1
b.44.1.1
c.37.1.8
1f60A/T0196-1f60A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f60A/T0196-1f60A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.7644e-181.2888e-23 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1dg1G/1efcA-T0196-fssp-local-adpstyle5.a2m 1dg1G/1efcA-T0196-fssp-local-adpstyle5.al 1.7374e-157.7339e-14 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1mj1A/T0196-1mj1A-local-adpstyle5.a2m 1mj1A/T0196-1mj1A-local-adpstyle5.al 6.3410e-152.5775e-18 i.1.1.1
1kk1A/T0196-1kk1A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kk1A/T0196-1kk1A-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.7041e-091.3187e-11 b.43.3.1
b.44.1.1
c.37.1.8
1s0uA/T0196-1s0uA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s0uA/T0196-1s0uA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.5411e-082.2605e-10
1r5bA/T0196-1r5bA-local-adpstyle1.a2m 1r5bA/T0196-1r5bA-local-adpstyle1.al 3.9242e-071.9065e-08
1kk3A/T0196-1kk3A-local-adpstyle5.a2m 1kk3A/T0196-1kk3A-local-adpstyle5.al 2.1272e-052.4642e-06 b.43.3.1
b.44.1.1
c.37.1.8
1d1nA/T0196-1d1nA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1d1nA/T0196-1d1nA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2168e-041.5740e-05 1d1nA b.43.3.1
1n0uA/T0196-1n0uA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n0uA/T0196-1n0uA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.7231e-045.9930e-05 b.43.3.1
d.58.11.1
d.14.1.1
c.37.1.8
1g7rA/T0196-1g7rA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g7rA/T0196-1g7rA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9055e-047.1923e-06 1g7rA b.43.3.1
c.20.1.1
c.37.1.8
1g7tA/T0196-1g7tA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g7tA/T0196-1g7tA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.1961e-041.0483e-05 1g7rA b.43.3.1
c.20.1.1
c.37.1.8
1g7sA/T0196-1g7sA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g7sA/T0196-1g7sA-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.9501e-041.4667e-05 1g7rA b.43.3.1
c.20.1.1
c.37.1.8
1dar/T0196-1dar-local-str2-1.5-adpstyle5.a2m 1dar/T0196-1dar-local-str2-1.5-adpstyle5.al 6.3124e-026.6768e-05 1dar b.43.3.1
d.58.11.1
d.14.1.1
c.37.1.8
1etu/T0196-1etu-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1etu/T0196-1etu-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.7612e-012.9983e-07 1efcA c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001