PFRMAT SS
TARGET T0195
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0195.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 45
METHOD
MODEL 1
M C 0.603
K C 0.376
V E 0.359
V E 0.400
K E 0.460
E E 0.539
F E 0.539
S E 0.664
V E 0.723
C E 0.446
G T 0.735
G T 0.773
R E 0.463
L E 0.779
I E 0.910
K E 0.946
L E 0.952
S E 0.954
H E 0.858
N E 0.685
S T 0.394
N T 0.405
S T 0.342
T T 0.432
K T 0.459
T C 0.428
S C 0.578
M E 0.621
N E 0.749
V E 0.912
N E 0.956
I E 0.963
Y E 0.924
L E 0.635
P C 0.404
K T 0.390
H G 0.529
Y G 0.455
Y T 0.346
A T 0.450
Q T 0.497
D T 0.569
F T 0.564
P T 0.491
R T 0.494
N T 0.543
K T 0.560
R C 0.569
I C 0.515
P C 0.557
T E 0.885
V E 0.970
F E 0.969
Y E 0.952
L E 0.877
S E 0.517
G C 0.456
L T 0.508
T T 0.532
C T 0.474
T C 0.581
P H 0.807
D H 0.884
N H 0.845
A H 0.892
S H 0.890
E H 0.863
K H 0.888
A H 0.814
F H 0.867
W H 0.951
Q H 0.945
F H 0.963
Q H 0.960
A H 0.953
D H 0.934
K H 0.879
Y H 0.450
G C 0.864
F E 0.796
A E 0.984
I E 0.989
V E 0.985
F E 0.945
P E 0.751
D E 0.404
T C 0.436
S T 0.834
P T 0.892
R T 0.854
G T 0.819
D C 0.465
E C 0.293
V T 0.359
A T 0.425
N T 0.479
D T 0.530
P T 0.427
E T 0.438
G T 0.408
S T 0.356
W T 0.360
D T 0.361
F T 0.425
G T 0.596
Q T 0.510
G C 0.424
A C 0.485
G E 0.392
F E 0.559
Y E 0.556
L E 0.374
N E 0.286
A H 0.345
T H 0.410
Q H 0.557
E H 0.531
P H 0.510
Y H 0.386
A T 0.402
Q T 0.460
H T 0.520
Y T 0.395
Q H 0.326
M H 0.523
Y H 0.650
D H 0.684
Y H 0.729
I H 0.756
H H 0.730
K H 0.816
E H 0.840
L H 0.937
P H 0.942
Q H 0.943
T H 0.942
L H 0.935
D H 0.885
S H 0.818
H H 0.582
F C 0.487
N C 0.406
K T 0.356
N C 0.372
G C 0.335
D H 0.456
V H 0.614
K H 0.654
L H 0.593
D H 0.421
F H 0.271
L T 0.282
D C 0.317
N C 0.274
V E 0.423
A E 0.600
I E 0.842
T E 0.799
G E 0.497
H E 0.404
S C 0.442
M H 0.699
G H 0.821
G H 0.988
Y H 0.994
G H 0.999
A H 0.999
I H 0.999
C H 0.999
G H 0.996
Y H 0.991
L H 0.977
K H 0.927
G H 0.421
Y C 0.603
S C 0.498
G C 0.450
K C 0.411
R E 0.353
Y E 0.723
K E 0.767
S E 0.878
C E 0.861
S E 0.771
A E 0.636
F E 0.331
A T 0.375
P T 0.424
I T 0.509
V T 0.425
N T 0.489
P G 0.552
S G 0.500
N G 0.410
V C 0.579
P C 0.351
W H 0.716
G H 0.821
Q H 0.750
K H 0.745
A H 0.795
F H 0.763
K H 0.674
G H 0.638
Y H 0.409
L T 0.387
G T 0.439
E T 0.387
E H 0.404
K H 0.459
A H 0.581
Q H 0.647
W H 0.653
E H 0.550
A H 0.569
Y H 0.525
D H 0.434
P H 0.801
C H 0.813
L H 0.838
L H 0.855
I H 0.849
K H 0.799
N H 0.624
I H 0.443
R C 0.375
H T 0.472
V T 0.462
G T 0.478
D T 0.370
D C 0.414
R C 0.408
I E 0.609
L E 0.758
I E 0.728
H E 0.623
V C 0.350
G C 0.445
D T 0.506
S T 0.478
D T 0.423
P H 0.350
F T 0.377
L H 0.417
E H 0.403
E H 0.404
H H 0.490
L H 0.394
K C 0.480
P H 0.712
E H 0.751
L H 0.854
L H 0.942
L H 0.958
E H 0.944
A H 0.936
V H 0.924
K H 0.903
A H 0.792
T H 0.509
S C 0.442
W C 0.453
Q C 0.679
D C 0.508
Y C 0.487
V E 0.814
E E 0.950
I E 0.950
K E 0.925
K E 0.760
V T 0.350
H T 0.541
G T 0.654
F T 0.610
D C 0.381
H C 0.301
S H 0.551
Y H 0.877
Y H 0.905
F H 0.922
V H 0.891
S H 0.900
T H 0.853
F H 0.834
V H 0.958
P H 0.972
E H 0.976
H H 0.986
A H 0.997
E H 0.997
F H 0.995
H H 0.994
A H 0.984
R H 0.953
N H 0.884
L H 0.586
G C 0.511
L C 0.622
I C 0.951
END