PFRMAT SS TARGET T0194 METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 6 (1 EBGHTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0194.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 43 METHOD MODEL 1 M H 0.580 A H 0.714 N H 0.743 A H 0.731 P H 0.673 K H 0.579 G C 0.528 V C 0.655 K C 0.655 F C 0.590 S C 0.447 T T 0.413 S C 0.463 Q C 0.574 T C 0.669 T C 0.781 E H 0.826 E H 0.916 I H 0.964 V H 0.985 R H 0.991 A H 0.991 K H 0.993 V H 0.990 S H 0.980 E H 0.933 L H 0.874 V H 0.790 E H 0.653 Q T 0.394 Y T 0.579 D C 0.495 L E 0.753 I E 0.985 I E 0.995 G E 0.995 I E 0.973 P E 0.825 I E 0.452 D T 0.544 K T 0.546 E T 0.502 I T 0.471 S C 0.387 A H 0.551 S H 0.845 Y H 0.922 A H 0.938 N H 0.958 W H 0.993 K H 0.989 L H 0.988 V H 0.985 E H 0.976 K H 0.937 D H 0.851 Y H 0.443 A T 0.509 S C 0.490 K C 0.462 F E 0.937 H E 0.984 V E 0.985 L E 0.916 D E 0.586 A C 0.443 R T 0.512 A T 0.350 V H 0.438 E H 0.482 M H 0.617 I H 0.685 I H 0.865 D H 0.919 W H 0.950 L H 0.987 I H 0.995 N H 0.997 D H 0.997 I H 0.998 K H 0.997 G H 0.994 W H 0.991 L H 0.980 N H 0.945 T H 0.709 N C 0.576 P T 0.522 Y T 0.550 S C 0.725 R H 0.870 E H 0.926 G H 0.960 L H 0.985 D H 0.995 R H 0.994 F H 0.996 V H 0.993 E H 0.985 Q H 0.940 Y H 0.883 R H 0.770 K H 0.566 K T 0.396 T C 0.458 A E 0.427 A E 0.960 V E 0.990 L E 0.992 F E 0.975 V E 0.833 T E 0.398 D T 0.442 T T 0.490 K T 0.539 P T 0.453 L T 0.353 V E 0.357 A T 0.356 G T 0.430 G T 0.364 R E 0.371 L T 0.457 S T 0.490 N H 0.441 L H 0.680 K H 0.861 S H 0.717 F H 0.700 I H 0.815 I H 0.870 K H 0.868 S H 0.883 L H 0.821 K H 0.630 F H 0.724 H H 0.704 L H 0.686 L H 0.629 I H 0.609 S H 0.578 F E 0.494 L E 0.544 G T 0.816 E T 0.931 N T 0.968 G T 0.912 K C 0.756 L E 0.753 Q E 0.730 F E 0.477 F H 0.594 D H 0.545 K H 0.545 A H 0.488 R H 0.531 S H 0.411 A H 0.875 H H 0.960 D H 0.975 A H 0.990 H H 0.997 K H 0.998 L H 0.998 A H 0.997 V H 0.998 K H 0.997 F H 0.998 L H 0.995 K H 0.983 K H 0.935 Q H 0.746 L H 0.652 L H 0.453 K H 0.379 H T 0.505 S T 0.559 A T 0.615 K T 0.545 L T 0.435 K E 0.499 R E 0.707 G E 0.879 A E 0.933 F E 0.965 L E 0.970 T E 0.947 T E 0.865 V E 0.578 F T 0.433 D T 0.488 E H 0.538 Q H 0.759 T H 0.804 N H 0.892 T H 0.936 N H 0.934 L H 0.951 V H 0.976 Q H 0.984 E H 0.987 F H 0.975 D H 0.957 K H 0.901 L H 0.705 L C 0.400 D C 0.451 H C 0.422 S T 0.413 I C 0.398 N C 0.392 I E 0.515 E E 0.704 Q E 0.777 S E 0.694 L E 0.528 L C 0.464 S C 0.376 P H 0.275 V E 0.392 I E 0.609 C E 0.646 T E 0.563 H E 0.563 T E 0.422 G T 0.805 L T 0.942 N T 0.914 S E 0.590 Y E 0.939 V E 0.989 I E 0.990 V E 0.976 L E 0.941 Q E 0.849 G C 0.522 E C 0.968 END