PFRMAT SS
TARGET T0193
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0193.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 18
METHOD
MODEL 1
M C 0.781
K C 0.725
V C 0.724
P C 0.805
E H 0.947
A H 0.973
A H 0.975
I H 0.951
S H 0.913
R H 0.847
L H 0.809
I H 0.812
T H 0.890
Y H 0.919
L H 0.962
R H 0.973
I H 0.981
L H 0.989
E H 0.990
E H 0.986
L H 0.983
E H 0.954
A H 0.934
Q H 0.787
G C 0.826
V C 0.806
H C 0.506
R E 0.385
T C 0.496
S C 0.688
S H 0.840
E H 0.944
Q H 0.955
L H 0.970
G H 0.973
E H 0.961
L H 0.947
A H 0.881
Q C 0.905
V C 0.927
T C 0.954
A H 0.960
F H 0.964
Q H 0.960
V H 0.981
R H 0.971
K H 0.963
D H 0.930
L H 0.928
S H 0.808
Y H 0.648
F T 0.309
G T 0.566
S T 0.727
Y T 0.744
G T 0.752
T T 0.389
R E 0.545
G E 0.403
V E 0.406
G C 0.406
Y E 0.393
T C 0.547
V H 0.964
P H 0.990
V H 0.988
L H 0.991
K H 0.993
R H 0.990
E H 0.995
L H 0.994
R H 0.976
H H 0.948
I H 0.904
L H 0.815
G C 0.730
L C 0.504
N T 0.518
R T 0.487
K E 0.356
W E 0.491
G E 0.652
L E 0.939
C E 0.982
I E 0.988
V E 0.961
G E 0.652
M C 0.415
G T 0.319
R H 0.862
L H 0.974
G H 0.992
S H 0.992
A H 0.979
L H 0.966
A H 0.938
D H 0.760
Y H 0.441
P H 0.282
G T 0.374
F T 0.449
G T 0.747
E T 0.810
S T 0.734
F E 0.667
E E 0.942
L E 0.989
R E 0.984
G E 0.978
F E 0.927
F E 0.841
D E 0.634
V T 0.345
D T 0.779
P T 0.805
E T 0.777
K T 0.621
V E 0.365
G E 0.569
R E 0.685
P E 0.590
V T 0.700
R T 0.890
G T 0.852
G E 0.474
V E 0.764
I E 0.887
E E 0.762
H C 0.507
V H 0.455
D H 0.538
L H 0.584
L H 0.858
P H 0.854
Q H 0.809
R H 0.658
V H 0.500
P T 0.543
G T 0.647
R T 0.601
I T 0.434
E E 0.680
I E 0.983
A E 0.994
L E 0.992
L E 0.977
T E 0.863
V C 0.503
P C 0.739
R H 0.651
E H 0.782
A H 0.846
A H 0.920
Q H 0.970
K H 0.975
A H 0.993
A H 0.998
D H 0.999
L H 0.999
L H 0.997
V H 0.994
A H 0.974
A H 0.864
G C 0.876
I C 0.804
K E 0.584
G E 0.965
I E 0.983
L E 0.976
N E 0.902
F E 0.650
A E 0.620
P E 0.750
V E 0.911
V E 0.932
L E 0.863
E E 0.776
V E 0.643
P T 0.483
K T 0.731
E T 0.629
V E 0.642
A E 0.855
V E 0.924
E E 0.815
N E 0.699
V E 0.654
D C 0.439
F H 0.431
L H 0.603
A H 0.936
G H 0.966
L H 0.987
T H 0.995
R H 0.997
L H 0.998
S H 0.998
F H 0.995
A H 0.992
I H 0.984
L H 0.739
N C 0.587
P H 0.760
K H 0.804
W H 0.854
R H 0.845
E H 0.796
E H 0.767
M H 0.703
M H 0.556
G C 0.919
END