PFRMAT SS
TARGET T0193
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0193.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 18
METHOD
MODEL 1
M C 0.738
K C 0.528
V C 0.433
P C 0.821
E H 0.920
A H 0.909
A H 0.829
I H 0.935
S H 0.867
R H 0.880
L H 0.850
I H 0.969
T H 0.977
Y H 0.990
L H 0.994
R H 0.991
I H 0.990
L H 0.987
E H 0.979
E H 0.969
L H 0.955
E H 0.901
A H 0.709
Q T 0.762
G T 0.857
V C 0.751
H C 0.449
R E 0.678
T E 0.645
S C 0.493
S H 0.764
E H 0.932
Q H 0.951
L H 0.973
G H 0.960
E H 0.933
L H 0.858
A H 0.450
Q T 0.653
V C 0.590
T C 0.922
A H 0.754
F H 0.894
Q H 0.899
V H 0.969
R H 0.961
K H 0.955
D H 0.926
L H 0.892
S H 0.775
Y H 0.675
F H 0.669
G H 0.488
S T 0.400
Y T 0.546
G T 0.401
T C 0.489
R S 0.299
G C 0.358
V E 0.376
G E 0.408
Y E 0.387
T C 0.549
V H 0.925
P H 0.963
V H 0.961
L H 0.979
K H 0.989
R H 0.986
E H 0.979
L H 0.979
R H 0.964
H H 0.950
I H 0.874
L H 0.481
G T 0.649
L C 0.449
N C 0.605
R S 0.318
K E 0.415
W E 0.602
G E 0.781
L E 0.980
C E 0.993
I E 0.994
V E 0.981
G E 0.814
M C 0.412
G S 0.521
R H 0.372
L H 0.829
G H 0.921
S H 0.909
A H 0.895
L H 0.827
A H 0.652
D H 0.463
Y C 0.373
P C 0.317
G T 0.338
F C 0.265
G C 0.304
E T 0.469
S T 0.447
F E 0.693
E E 0.954
L E 0.986
R E 0.987
G E 0.983
F E 0.948
F E 0.922
D E 0.722
V C 0.471
D C 0.685
P T 0.396
E G 0.391
K G 0.517
V C 0.277
G C 0.331
R E 0.709
P E 0.772
V E 0.729
R T 0.750
G T 0.627
G E 0.579
V E 0.838
I E 0.823
E E 0.719
H C 0.383
V H 0.415
D H 0.469
L H 0.518
L H 0.687
P H 0.712
Q H 0.702
R H 0.732
V H 0.613
P H 0.338
G T 0.457
R T 0.626
I C 0.699
E E 0.557
I E 0.981
A E 0.994
L E 0.995
L E 0.965
T E 0.716
V C 0.453
P C 0.796
R H 0.598
E H 0.837
A H 0.895
A H 0.958
Q H 0.962
K H 0.969
A H 0.982
A H 0.986
D H 0.992
L H 0.994
L H 0.995
V H 0.992
A H 0.946
A T 0.510
G T 0.909
I C 0.940
K S 0.648
G E 0.926
I E 0.975
L E 0.974
N E 0.703
F C 0.412
A C 0.548
P C 0.485
V E 0.521
V E 0.706
L E 0.537
E E 0.468
V C 0.522
P C 0.754
K T 0.757
E T 0.541
V C 0.674
A E 0.904
V E 0.960
E E 0.974
N E 0.919
V E 0.643
D C 0.486
F C 0.430
L H 0.336
A H 0.509
G H 0.745
L H 0.887
T H 0.964
R H 0.980
L H 0.989
S H 0.988
F H 0.981
A H 0.939
I H 0.782
L H 0.537
N C 0.514
P H 0.757
K H 0.762
W H 0.789
R H 0.831
E H 0.754
E H 0.712
M H 0.558
M C 0.331
G C 0.986
END