# command:# Seed set to 1031556810 # command:# Prefix for input files set to # command:# reading script from file define-score.script # Prefix for input files set to /projects/kestrel/users/karplus/burial/undertaker/atoms-inputs/ # reading monomeric-50pc.atoms # After reading monomeric-50pc.atoms have 448 chains in training database # 111547 residues have no bad marker # 670 residues lack atoms needed to compute omega # 322 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 6 # HAS_OXT 325 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 523 # HAS_UNKNOWN_ATOMS 2 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 208 # NON_PLANAR_PEPTIDE 28 # Note: may sum to more than number of residues, # because one residue may have multiple problems # Reading rotamer library from monomeric-50pc.rot # Prefix for input files set to /projects/kestrel/users/karplus/burial/undertaker/spots/ # ReadAtomType pdb-name.types Read AtomType pdb-name with 37 types. # ReadClashTable pdb-atom-name.clash # Read ClashTable pdb-atom-name Reading spots from monomeric-50pc-dry-5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-5.hist # created burial cost function dry5 with radius 5 Reading spots from monomeric-50pc-wet-6.5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-wet-6.5.hist # created burial cost function wet6.5 with radius 6.5 Reading spots from monomeric-50pc-dry-6.5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-6.5.hist # created burial cost function dry6.5 with radius 6.5 Reading spots from monomeric-50pc-generic-6.5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-generic-6.5.hist # created burial cost function gen6.5 with radius 6.5 Reading spots from monomeric-50pc-dry-8.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-8.hist # created burial cost function dry8 with radius 8 Reading spots from monomeric-50pc-dry-10.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-10.hist # created burial cost function dry10 with radius 10 Reading spots from monomeric-50pc-dry-12.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-12.hist # created burial cost function dry12 with radius 12 # reading histogram from monomeric-smoothed-alpha.hist # created alpha cost function alpha with offset 0 and 360 bins # reading histogram from monomeric-smoothed-alpha-1.hist # created alpha cost function alpha_prev with offset -1 and 360 bins CPU_time= 10910 msec, elapsed time= 12074.6 msec) # Prefix for input files set to # Reading target chain from PDB file T0191.blank.pdb Read PDB file T0191.blank.pdb as target. Have 110 residues and 842 atoms. # No conformations to remove in PopConform # Prefix for input files set to /projects/compbio/lib/alphabet/ # Read 3 alphabets from alpha.alphabet # Prefix for input files set to # reading predictions from T0191.t2k.alpha.rdb # created predicted alpha cost function pred_alpha2 with 360 bins # reading script from file try5.constraints # Constraint # added constraint: (T0191)P22.CA (T0191)F29.CA min_dist=9.5 desired_dist=10.5 max_dist=11.5 # Constraint # added constraint: (T0191)L48.CA (T0191)A55.CA min_dist=9.5 desired_dist=10.5 max_dist=11.5 # Constraint # added constraint: (T0191)I71.CA (T0191)D78.CA min_dist=9.5 desired_dist=10.5 max_dist=11.5 # Constraint # added constraint: (T0191)K82.CA (T0191)L86.CA min_dist=5 desired_dist=6 max_dist=8 # Constraint # added constraint: (T0191)V8.CB (T0191)I12.CB min_dist=13 desired_dist=14.6 max_dist=16 # Constraint # added constraint: (T0191)Y36.CB (T0191)A40.CB min_dist=13 desired_dist=14.6 max_dist=16 # Constraint # added constraint: (T0191)F63.CB (T0191)I67.CB min_dist=13 desired_dist=14.6 max_dist=16 # Constraint # added constraint: (T0191)I9.CB (T0191)V37.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)G10.CA (T0191)Y38.CA min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)L11.CB (T0191)V39.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)I12.CA (T0191)A40.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)L11.N (T0191)Y38.O min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)L11.O (T0191)A40.N min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)G13.N (T0191)A40.O min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)Y38.CA (T0191)G62.CA min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)V39.CB (T0191)F63.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)A40.CB (T0191)N64.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)F41.CB (T0191)V65.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)D42.CB (T0191)T66.CB min_dist=4 desired_dist=5.12 max_dist=6 # Constraint # added constraint: (T0191)V39.N (T0191)G62.O min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)V39.O (T0191)N64.N min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)N91.CA (T0191)G102.CA min_dist=4 desired_dist=4.7 max_dist=6 # Constraint # added constraint: (T0191)T92.CB (T0191)I101.CB min_dist=4 desired_dist=4.7 max_dist=6 # Constraint # added constraint: (T0191)I93.CB (T0191)A100.CB min_dist=4 desired_dist=4.7 max_dist=6 # Constraint # added constraint: (T0191)K94.CB (T0191)K99.CB min_dist=4 desired_dist=4.7 max_dist=6 # Constraint # added constraint: (T0191)N91.O (T0191)G102.N min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)I93.N (T0191)A100.O min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)I93.O (T0191)A100.N min_dist=2.2 desired_dist=2.7 max_dist=3.2 # Constraint # added constraint: (T0191)I95.N (T0191)G98.O min_dist=2.2 desired_dist=2.7 max_dist=3.2 # SetCost created cost = # ( 0.2 * gen6.5(6.5) + 1 * wet6.5(6.5, /log(length)) + 3 * dry5(5) + 11 * dry6.5(6.5) + 4 * dry8(8) + 1 * dry12(12) + 0.5 * phobic_fit + 0.2 * sidechain + 1.5 * clashes + -0.2 * sidechain_clashes + 0.5 * backbone_clashes + 10 * break + 1 * pred_alpha2 + 0.1 * constraints + 1 * contact_order ) # command:CPU_time= 14130 msec, elapsed time= 15370.2 msec) # command:# Making generic fragment library # fragment library contains # type length num_fragments num_indexes_used # n-terminus 1 407 20 (100%) # n-terminus 2 408 196 (49%) # middle 1 109496 20 (100%) # middle 2 108592 400 (100%) # middle 3 107719 7822 (97.775%) # middle 4 106865 64233 (40.1456%) # c-terminus 1 408 20 (100%) # c-terminus 2 406 227 (56.75%) # ss-bonds 409 # command:CPU_time= 19120 msec, elapsed time= 20366.5 msec) # command:# Prefix for output files set to decoys/ # command:# created conformation for T0191 from sequence in target chain replacing old conformation. # command:# naming current conformation T0191.rand # command:CPU_time= 19130 msec, elapsed time= 20369.1 msec) # command:# Prefix for input files set to # command:# reading Template.atoms # After reading Template.atoms have 86 chains in template library # command:# reading script from file T0191.t2k.undertaker-align.script # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 3 :NAKTKVIGLIGHP 1gpjA 164 :SLHDKTVLVVGAG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues neighbor-bump: 2.64239 Ang H13.N and P14.CD neighbor-bump: 2.4811 Ang I11.CG2 and G12.N self-bump: 1.33845 Ang I11.CA and I11.CB T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI 1gpjA 177 :EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL Fragment has 37 clashes (null) has 37 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 37 residues other bump:2.74691 Ang K12.NZ and I36.C other bump:2.7452 Ang K12.CD and I36.O other bump:2.33628 Ang K12.CE and I36.O other bump:2.67751 Ang Y32.CD2 and I36.CD1 other bump:2.4315 Ang Y32.CE2 and I36.CD1 other bump:2.61108 Ang Y32.CZ and I36.CD1 other bump:3.09957 Ang V21.CA and L33.CD2 other bump:2.154 Ang V21.CB and L33.CD2 other bump:1.72432 Ang V21.CG2 and L33.CD2 other bump:2.70575 Ang V21.CB and L33.CG other bump:2.87445 Ang V21.CG2 and L33.CG other bump:2.75651 Ang K5.CA and Y32.OH other bump:2.7189 Ang I8.CB and Y32.OH other bump:2.71142 Ang I8.CG1 and Y32.OH other bump:1.97608 Ang I8.CD1 and Y32.OH other bump:2.71718 Ang I8.CD1 and Y32.CZ other bump:2.69752 Ang K5.CG and Y32.CE1 other bump:1.99596 Ang I23.N and I29.CD1 other bump:2.78421 Ang I23.CA and I29.CD1 other bump:2.8927 Ang I23.CB and I29.CD1 other bump:2.67458 Ang I23.O and I29.CD1 other bump:2.44006 Ang V21.O and I29.CG2 other bump:2.39876 Ang I23.CG1 and I29.CG1 other bump:2.7833 Ang I23.CD1 and I29.CG1 other bump:2.96834 Ang T22.C and I29.CG1 other bump:2.46806 Ang I23.N and I29.CG1 other bump:2.97008 Ang I23.CA and I29.CG1 other bump:2.35787 Ang I23.CB and I29.CG1 other bump:2.53707 Ang I23.CD1 and I29.CA other bump:2.29794 Ang I23.CD1 and I29.N other bump:2.51978 Ang I23.CD1 and E28.C other bump:1.4282 Ang I16.CD1 and F19.CZ other bump:2.81358 Ang I16.CG1 and F19.CZ other bump:2.29029 Ang I16.CD1 and F19.CE2 other bump:3.11319 Ang I16.CB and F19.CE2 other bump:3.16502 Ang I16.CG1 and F19.CE2 other bump:2.43785 Ang I16.CD1 and F19.CE1 Number of specific fragments= 2 total=2 Number of alignments=1 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 3 :NAKTKVIGLIGHP 1gpjA 164 :SLHDKTVLVVGAG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues neighbor-bump: 2.64239 Ang H13.N and P14.CD neighbor-bump: 2.4811 Ang I11.CG2 and G12.N self-bump: 1.33845 Ang I11.CA and I11.CB T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 177 :EMGKTVAKSLVDRGVRAVLVANRT Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.61414 Ang V21.CG1 and F23.CE1 neighbor-bump: 2.64484 Ang N17.OD1 and Y18.CD1 neighbor-bump: 2.18565 Ang N17.OD1 and Y18.N other bump:2.95727 Ang H7.CE1 and F11.CZ other bump:2.59773 Ang H7.NE2 and F11.CZ other bump:2.77283 Ang H7.CE1 and F11.CE1 other bump:2.58089 Ang H7.CD2 and F11.CE1 other bump:2.14232 Ang H7.NE2 and F11.CE1 neighbor-bump: 2.67595 Ang S3.N and P4.CD other bump:2.34977 Ang G1.O and P4.CD other bump:2.75409 Ang G1.C and P4.CD T0191 48 :LKYVIDGAKALGIV 1gpjA 201 :YERAVELARDLGGE Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.64559 Ang A9.CA and I14.CD1 other bump:2.96623 Ang A9.CB and I14.CD1 other bump:3.0781 Ang A9.C and I14.CG1 other bump:2.36875 Ang A9.CA and I14.CG1 other bump:2.60036 Ang A9.CB and I14.CG1 Number of specific fragments= 3 total=5 Number of alignments=2 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALGIV 1gpjA 78 :GSEAVRHLFRVASGLESM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 67 :IPHKIEIMKYLDEIDKDAQLIGAV 1gpjA 96 :MVGEQEILRQVKKAYDRAARLGTL Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.82381 Ang E7.CD and Y11.OH other bump:2.18656 Ang E7.CG and Y11.CE1 other bump:2.67429 Ang E7.CD and Y11.CE1 other bump:2.66578 Ang E7.O and Y11.CD1 other bump:2.60287 Ang I2.CG1 and K5.NZ other bump:2.71055 Ang I2.CA and K5.CE other bump:1.75337 Ang I2.CB and K5.CE other bump:1.95531 Ang I2.CG1 and K5.CE other bump:2.77381 Ang I2.CB and K5.CD other bump:2.38158 Ang I2.O and K5.CG other bump:3.23658 Ang I2.C and K5.CG other bump:2.87545 Ang I2.CB and K5.CG Number of specific fragments= 4 total=9 Number of alignments=3 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALGIV 1gpjA 78 :GSEAVRHLFRVASGLESM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 67 :IPHKIEIMKYLDEIDKDAQLIGAV 1gpjA 96 :MVGEQEILRQVKKAYDRAARLGTL Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.82381 Ang E7.CD and Y11.OH other bump:2.18656 Ang E7.CG and Y11.CE1 other bump:2.67429 Ang E7.CD and Y11.CE1 other bump:2.66578 Ang E7.O and Y11.CD1 other bump:2.60287 Ang I2.CG1 and K5.NZ other bump:2.71055 Ang I2.CA and K5.CE other bump:1.75337 Ang I2.CB and K5.CE other bump:1.95531 Ang I2.CG1 and K5.CE other bump:2.77381 Ang I2.CB and K5.CD other bump:2.38158 Ang I2.O and K5.CG other bump:3.23658 Ang I2.C and K5.CG other bump:2.87545 Ang I2.CB and K5.CG Number of specific fragments= 4 total=13 Number of alignments=4 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1ccwA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 T0191 96 :EDGK 1ccwA 83 :LEGI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues neighbor-bump: 2.41029 Ang D3.CB and G4.N self-bump: 2.19632 Ang D3.CB and D3.C self-bump: 1.2993 Ang D3.CA and D3.CB Number of specific fragments= 5 total=18 Number of alignments=5 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1ccwA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIGA 1ccwA 71 :CKGLRQKCDEAGL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.57996 Ang D8.O and I12.CD1 T0191 97 :DGK 1ccwA 84 :EGI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 5 total=23 Number of alignments=6 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1dl5A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 9 :IGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLD 1dl5A 48 :SYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK Fragment has 145 clashes (null) has 145 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 72 residues other bump:2.88741 Ang L41.CG and L70.C other bump:1.84821 Ang L41.CD1 and L70.C other bump:3.12638 Ang L41.CD2 and L70.C other bump:1.69168 Ang L41.CD1 and L70.O other bump:2.62631 Ang N40.N and L70.CD2 other bump:1.80807 Ang N40.CA and L70.CD2 other bump:3.11958 Ang N40.CB and L70.CD2 other bump:1.73488 Ang N40.O and L70.CD2 other bump:2.39583 Ang L41.CB and L70.CD2 other bump:2.05517 Ang L41.CG and L70.CD2 other bump:1.08916 Ang N40.C and L70.CD2 other bump:1.70473 Ang L41.N and L70.CD2 other bump:2.64451 Ang L41.CA and L70.CD2 other bump:2.59853 Ang E39.O and L70.CD2 other bump:2.89934 Ang E39.C and L70.CD2 other bump:1.32115 Ang E39.O and L70.CD1 other bump:2.41674 Ang E39.C and L70.CD1 other bump:3.14713 Ang N40.N and L70.CG other bump:2.62505 Ang N40.CA and L70.CG other bump:2.48792 Ang L41.CG and L70.CG other bump:2.57713 Ang N40.C and L70.CG other bump:3.01854 Ang L41.N and L70.CG other bump:1.95201 Ang E39.O and L70.CG other bump:2.84695 Ang E39.C and L70.CG other bump:2.03905 Ang L41.CG and L70.CB other bump:2.4301 Ang L41.CD1 and L70.CB other bump:2.31347 Ang L41.CD2 and L70.CB other bump:2.28694 Ang L41.CG and L70.CA other bump:1.65424 Ang L41.CD1 and L70.CA other bump:3.02711 Ang L41.CD2 and L70.CA other bump:2.47286 Ang E65.O and Y69.CD1 other bump:2.37889 Ang P61.CA and M67.CE other bump:0.346255 Ang P61.O and M67.CE other bump:1.18355 Ang P61.C and M67.CE other bump:2.16934 Ang H62.N and M67.CE other bump:2.74892 Ang H62.CA and M67.CE other bump:2.73975 Ang P61.N and M67.CE other bump:1.54438 Ang P61.O and M67.SD other bump:2.68438 Ang P61.C and M67.SD other bump:2.65776 Ang P61.CB and M67.CG other bump:2.65885 Ang P61.CG and M67.CG other bump:2.4478 Ang P61.O and M67.CG other bump:3.01227 Ang P61.C and M67.CG other bump:3.25508 Ang E10.CD and I66.CG2 other bump:2.56697 Ang E10.OE2 and I66.CG2 other bump:1.72582 Ang P8.CD and K63.NZ other bump:2.14694 Ang P8.CG and K63.NZ other bump:1.42343 Ang P8.CD and K63.CE other bump:2.15505 Ang P8.CG and K63.CE other bump:2.89144 Ang P8.CD and K63.CD other bump:2.99319 Ang P38.CG and P61.N other bump:2.27726 Ang P38.CG and I60.C other bump:2.49857 Ang P38.CD and I60.C other bump:2.028 Ang P38.CG and I60.O other bump:1.54629 Ang P38.CD and I60.O other bump:2.87652 Ang F34.CE1 and I60.CG2 other bump:3.07801 Ang F34.CZ and I60.CG2 other bump:2.92363 Ang P38.CG and I60.CA other bump:2.60645 Ang P38.CG and I60.N other bump:3.06021 Ang P38.CG and T59.C other bump:2.27434 Ang V44.CG2 and T59.OG1 other bump:2.87399 Ang P38.CA and T59.CG2 other bump:2.26825 Ang P38.CB and T59.CG2 other bump:2.36814 Ang P38.CG and T59.CG2 other bump:3.04294 Ang D35.OD2 and T59.CG2 other bump:2.94302 Ang F56.CZ and V58.CG2 other bump:2.88874 Ang F56.CD2 and V58.CG2 other bump:1.99187 Ang F56.CE2 and V58.CG2 other bump:2.71235 Ang A48.CA and N57.ND2 other bump:2.48756 Ang Y31.O and L51.CD2 other bump:2.79002 Ang L27.CD1 and L51.CD1 other bump:2.66508 Ang D35.OD2 and V44.CG2 other bump:2.62382 Ang F22.CG and Y43.OH other bump:1.76498 Ang F22.CD1 and Y43.OH other bump:1.32034 Ang F22.CE1 and Y43.OH other bump:2.79851 Ang F22.CE2 and Y43.OH other bump:2.02665 Ang F22.CZ and Y43.OH other bump:2.9775 Ang H18.ND1 and Y43.CZ other bump:1.8034 Ang F22.CE1 and Y43.CZ other bump:2.75713 Ang F22.CE2 and Y43.CZ other bump:1.70492 Ang F22.CZ and Y43.CZ other bump:2.15623 Ang F22.CE1 and Y43.CE2 other bump:2.15759 Ang F22.CZ and Y43.CE2 other bump:2.50693 Ang H18.CB and Y43.CE1 other bump:2.6895 Ang H18.CG and Y43.CE1 other bump:2.21061 Ang H18.ND1 and Y43.CE1 other bump:3.01171 Ang F22.CE1 and Y43.CE1 other bump:2.94243 Ang F22.CE2 and Y43.CE1 other bump:2.39965 Ang F22.CZ and Y43.CE1 other bump:3.01702 Ang F22.CZ and Y43.CD2 other bump:2.01884 Ang H18.ND1 and Y43.CD1 neighbor-bump: 2.6735 Ang N40.O and L41.CD1 neighbor-bump: 2.20769 Ang N40.O and L41.CG neighbor-bump: 2.61795 Ang N40.C and L41.CG neighbor-bump: 1.82484 Ang N40.O and L41.CB neighbor-bump: 2.31819 Ang N40.C and L41.CB other bump:2.52486 Ang I2.CD1 and N40.OD1 other bump:2.61466 Ang I2.CD1 and N40.CG other bump:3.09297 Ang I2.CD1 and N40.CB other bump:2.76505 Ang E10.OE1 and N40.CB other bump:2.63237 Ang E10.CD and N40.N other bump:2.27582 Ang E10.OE2 and N40.N other bump:2.98758 Ang E10.CD and E39.C other bump:2.0636 Ang E10.OE2 and E39.C other bump:2.786 Ang E10.CA and E39.OE2 other bump:2.60153 Ang E10.C and E39.OE1 other bump:1.90329 Ang E10.CA and E39.OE1 other bump:0.963982 Ang E10.CG and E39.OE1 other bump:2.26663 Ang E10.CD and E39.OE1 other bump:1.17636 Ang E10.CB and E39.OE1 other bump:2.65608 Ang E10.CA and E39.CD other bump:1.92151 Ang E10.CG and E39.CD other bump:2.87261 Ang E10.CD and E39.CD other bump:2.29419 Ang E10.CB and E39.CD other bump:2.59124 Ang E10.CG and E39.CG other bump:2.76792 Ang E10.CD and E39.CG other bump:2.20008 Ang E10.OE2 and E39.CG other bump:2.46728 Ang E10.CG and E39.CB other bump:1.96135 Ang E10.CD and E39.CB other bump:1.20791 Ang E10.OE2 and E39.CB self-bump: 1.25601 Ang E39.CA and E39.CB other bump:2.907 Ang E10.CD and E39.CA other bump:1.88673 Ang E10.OE2 and E39.CA self-bump: 1.32748 Ang P38.N and P38.CD neighbor-bump: 2.5325 Ang L37.N and P38.CD self-bump: 2.19717 Ang P38.N and P38.CG neighbor-bump: 2.53999 Ang V36.C and L37.CB neighbor-bump: 2.25913 Ang V36.O and L37.CB other bump:2.67598 Ang N28.CB and Y31.CE2 other bump:2.47929 Ang N28.O and Y31.CD2 other bump:3.05107 Ang N28.C and Y31.CD2 neighbor-bump: 2.20027 Ang Y29.O and V30.CB neighbor-bump: 2.49905 Ang Y29.C and V30.CB other bump:1.97978 Ang A20.O and D24.OD2 other bump:2.7039 Ang A20.C and D24.OD2 other bump:2.06335 Ang F13.CB and H18.NE2 other bump:2.22916 Ang F13.CG and H18.NE2 other bump:2.60075 Ang F13.CD2 and H18.NE2 other bump:2.94194 Ang F13.CD2 and H18.CE1 other bump:2.51453 Ang F13.CB and H18.CD2 other bump:2.42018 Ang I2.CG1 and E10.OE1 other bump:1.89522 Ang I2.CD1 and E10.OE1 other bump:3.0744 Ang I2.CG1 and E10.CD other bump:2.472 Ang I2.CD1 and E10.CD other bump:3.01406 Ang I2.CG1 and E10.CG T0191 82 :KDAQLIGAVNTI 1dl5A 118 :RNVERLGIENVI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues Number of specific fragments= 2 total=25 Number of alignments=7 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1dl5A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 13 :GHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDE 1dl5A 52 :GEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR Fragment has 137 clashes (null) has 137 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 69 residues other bump:2.88741 Ang L37.CG and L66.C other bump:1.84821 Ang L37.CD1 and L66.C other bump:3.12638 Ang L37.CD2 and L66.C other bump:1.69168 Ang L37.CD1 and L66.O other bump:1.80807 Ang N36.CA and L66.CD2 other bump:3.11958 Ang N36.CB and L66.CD2 other bump:2.62631 Ang N36.N and L66.CD2 other bump:1.73488 Ang N36.O and L66.CD2 other bump:1.08916 Ang N36.C and L66.CD2 other bump:2.39583 Ang L37.CB and L66.CD2 other bump:2.05517 Ang L37.CG and L66.CD2 other bump:1.70473 Ang L37.N and L66.CD2 other bump:2.64451 Ang L37.CA and L66.CD2 other bump:2.59853 Ang E35.O and L66.CD2 other bump:2.89934 Ang E35.C and L66.CD2 other bump:1.32115 Ang E35.O and L66.CD1 other bump:2.41674 Ang E35.C and L66.CD1 other bump:2.62505 Ang N36.CA and L66.CG other bump:3.14713 Ang N36.N and L66.CG other bump:2.57713 Ang N36.C and L66.CG other bump:2.48792 Ang L37.CG and L66.CG other bump:3.01854 Ang L37.N and L66.CG other bump:1.95201 Ang E35.O and L66.CG other bump:2.84695 Ang E35.C and L66.CG other bump:2.03905 Ang L37.CG and L66.CB other bump:2.4301 Ang L37.CD1 and L66.CB other bump:2.31347 Ang L37.CD2 and L66.CB other bump:2.28694 Ang L37.CG and L66.CA other bump:1.65424 Ang L37.CD1 and L66.CA other bump:3.02711 Ang L37.CD2 and L66.CA other bump:2.47286 Ang E61.O and Y65.CD1 other bump:0.346255 Ang P57.O and M63.CE other bump:2.37889 Ang P57.CA and M63.CE other bump:1.18355 Ang P57.C and M63.CE other bump:2.16934 Ang H58.N and M63.CE other bump:2.74892 Ang H58.CA and M63.CE other bump:2.73975 Ang P57.N and M63.CE other bump:1.54438 Ang P57.O and M63.SD other bump:2.68438 Ang P57.C and M63.SD other bump:2.4478 Ang P57.O and M63.CG other bump:2.65776 Ang P57.CB and M63.CG other bump:2.65885 Ang P57.CG and M63.CG other bump:3.01227 Ang P57.C and M63.CG other bump:3.25508 Ang E6.CD and I62.CG2 other bump:2.56697 Ang E6.OE2 and I62.CG2 other bump:2.14694 Ang P4.CG and K59.NZ other bump:1.72582 Ang P4.CD and K59.NZ other bump:2.15505 Ang P4.CG and K59.CE other bump:1.42343 Ang P4.CD and K59.CE other bump:2.89144 Ang P4.CD and K59.CD other bump:2.99319 Ang P34.CG and P57.N other bump:2.27726 Ang P34.CG and I56.C other bump:2.49857 Ang P34.CD and I56.C other bump:2.028 Ang P34.CG and I56.O other bump:1.54629 Ang P34.CD and I56.O other bump:2.87652 Ang F30.CE1 and I56.CG2 other bump:3.07801 Ang F30.CZ and I56.CG2 other bump:2.92363 Ang P34.CG and I56.CA other bump:2.60645 Ang P34.CG and I56.N other bump:3.06021 Ang P34.CG and T55.C other bump:2.27434 Ang V40.CG2 and T55.OG1 other bump:2.87399 Ang P34.CA and T55.CG2 other bump:2.26825 Ang P34.CB and T55.CG2 other bump:2.36814 Ang P34.CG and T55.CG2 other bump:3.04294 Ang D31.OD2 and T55.CG2 other bump:1.99187 Ang F52.CE2 and V54.CG2 other bump:2.94302 Ang F52.CZ and V54.CG2 other bump:2.88874 Ang F52.CD2 and V54.CG2 other bump:2.71235 Ang A44.CA and N53.ND2 other bump:2.48756 Ang Y27.O and L47.CD2 other bump:2.79002 Ang L23.CD1 and L47.CD1 other bump:2.66508 Ang D31.OD2 and V40.CG2 other bump:2.62382 Ang F18.CG and Y39.OH other bump:1.76498 Ang F18.CD1 and Y39.OH other bump:1.32034 Ang F18.CE1 and Y39.OH other bump:2.79851 Ang F18.CE2 and Y39.OH other bump:2.02665 Ang F18.CZ and Y39.OH other bump:2.9775 Ang H14.ND1 and Y39.CZ other bump:1.8034 Ang F18.CE1 and Y39.CZ other bump:2.75713 Ang F18.CE2 and Y39.CZ other bump:1.70492 Ang F18.CZ and Y39.CZ other bump:2.15623 Ang F18.CE1 and Y39.CE2 other bump:2.15759 Ang F18.CZ and Y39.CE2 other bump:2.50693 Ang H14.CB and Y39.CE1 other bump:2.6895 Ang H14.CG and Y39.CE1 other bump:2.21061 Ang H14.ND1 and Y39.CE1 other bump:3.01171 Ang F18.CE1 and Y39.CE1 other bump:2.94243 Ang F18.CE2 and Y39.CE1 other bump:2.39965 Ang F18.CZ and Y39.CE1 other bump:3.01702 Ang F18.CZ and Y39.CD2 other bump:2.01884 Ang H14.ND1 and Y39.CD1 neighbor-bump: 2.6735 Ang N36.O and L37.CD1 neighbor-bump: 2.20769 Ang N36.O and L37.CG neighbor-bump: 2.61795 Ang N36.C and L37.CG neighbor-bump: 1.82484 Ang N36.O and L37.CB neighbor-bump: 2.31819 Ang N36.C and L37.CB other bump:2.76505 Ang E6.OE1 and N36.CB other bump:2.63237 Ang E6.CD and N36.N other bump:2.27582 Ang E6.OE2 and N36.N other bump:2.98758 Ang E6.CD and E35.C other bump:2.0636 Ang E6.OE2 and E35.C other bump:2.786 Ang E6.CA and E35.OE2 other bump:1.90329 Ang E6.CA and E35.OE1 other bump:2.60153 Ang E6.C and E35.OE1 other bump:0.963982 Ang E6.CG and E35.OE1 other bump:2.26663 Ang E6.CD and E35.OE1 other bump:1.17636 Ang E6.CB and E35.OE1 other bump:2.65608 Ang E6.CA and E35.CD other bump:1.92151 Ang E6.CG and E35.CD other bump:2.87261 Ang E6.CD and E35.CD other bump:2.29419 Ang E6.CB and E35.CD other bump:2.59124 Ang E6.CG and E35.CG other bump:2.76792 Ang E6.CD and E35.CG other bump:2.20008 Ang E6.OE2 and E35.CG other bump:2.46728 Ang E6.CG and E35.CB other bump:1.96135 Ang E6.CD and E35.CB other bump:1.20791 Ang E6.OE2 and E35.CB self-bump: 1.25601 Ang E35.CA and E35.CB other bump:2.907 Ang E6.CD and E35.CA other bump:1.88673 Ang E6.OE2 and E35.CA self-bump: 1.32748 Ang P34.N and P34.CD neighbor-bump: 2.5325 Ang L33.N and P34.CD self-bump: 2.19717 Ang P34.N and P34.CG neighbor-bump: 2.25913 Ang V32.O and L33.CB neighbor-bump: 2.53999 Ang V32.C and L33.CB other bump:2.67598 Ang N24.CB and Y27.CE2 other bump:2.47929 Ang N24.O and Y27.CD2 other bump:3.05107 Ang N24.C and Y27.CD2 neighbor-bump: 2.20027 Ang Y25.O and V26.CB neighbor-bump: 2.49905 Ang Y25.C and V26.CB other bump:1.97978 Ang A16.O and D20.OD2 other bump:2.7039 Ang A16.C and D20.OD2 other bump:2.06335 Ang F9.CB and H14.NE2 other bump:2.22916 Ang F9.CG and H14.NE2 other bump:2.60075 Ang F9.CD2 and H14.NE2 other bump:2.94194 Ang F9.CD2 and H14.CE1 other bump:2.51453 Ang F9.CB and H14.CD2 Number of specific fragments= 1 total=26 Number of alignments=8 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 8abp read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSP 8abp 3 :LKLGFLVKQPEEPWFQT Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79434 Ang H14.O and P18.CG other bump:2.92352 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKI 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPDPK Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.63966 Ang H26.ND1 and I28.CD1 other bump:2.08157 Ang H26.CE1 and I28.CD1 other bump:1.93494 Ang H26.ND1 and I28.CG1 other bump:2.0338 Ang H26.CE1 and I28.CG1 other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD Number of specific fragments= 3 total=29 Number of alignments=9 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 8abp read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 8abp 3 :LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.18907 Ang V35.CG2 and F37.CZ other bump:2.9422 Ang V35.CB and F37.CE1 other bump:1.80264 Ang V35.CG2 and F37.CE1 other bump:1.77184 Ang G6.CA and Y34.OH other bump:2.56053 Ang G6.C and Y34.OH other bump:2.92897 Ang G6.N and Y34.CZ other bump:2.33569 Ang G6.CA and Y34.CZ other bump:3.08826 Ang I5.C and Y34.CE1 other bump:2.83511 Ang G6.N and Y34.CE1 other bump:2.71666 Ang G6.CA and Y34.CE1 other bump:2.4208 Ang D27.OD1 and Y34.CB other bump:2.63074 Ang D27.CB and Y32.O other bump:2.51701 Ang K26.CB and Y32.OH other bump:3.17418 Ang D27.CA and Y32.CZ other bump:2.56683 Ang D27.OD2 and Y32.CZ other bump:2.41692 Ang D27.CG and Y32.CE1 other bump:1.34273 Ang D27.OD2 and Y32.CE1 other bump:1.50163 Ang D27.OD2 and Y32.CD1 other bump:2.73754 Ang D27.OD2 and Y32.CG neighbor-bump: 2.27112 Ang L30.O and N31.CB neighbor-bump: 2.6169 Ang L30.C and N31.CB other bump:2.83215 Ang H21.CE1 and F25.CZ other bump:2.6895 Ang H21.NE2 and F25.CZ other bump:2.77221 Ang H21.CD2 and F25.CE1 other bump:2.66368 Ang H21.CE1 and F25.CE1 other bump:2.14058 Ang H21.NE2 and F25.CE1 other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79435 Ang H14.O and P18.CG other bump:2.92353 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIP 8abp 42 :DGEKTLNAIDSLAASGAKGFVICTP Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.20284 Ang L6.CD1 and P26.CD neighbor-bump: 2.94794 Ang I25.CG1 and P26.CD other bump:2.53746 Ang L6.CD1 and P26.CG other bump:2.64379 Ang I18.CG2 and G20.O other bump:3.05624 Ang A13.CB and I18.CD1 other bump:2.48977 Ang N5.O and V9.CG2 other bump:2.8389 Ang E4.OE2 and Y8.CZ other bump:2.30477 Ang E4.OE2 and Y8.CE1 other bump:2.64155 Ang E4.O and Y8.CD1 self-bump: 1.38331 Ang P3.N and P3.CD Number of specific fragments= 2 total=31 Number of alignments=10 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1ccwA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=35 Number of alignments=11 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1ccwA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1ccwA/T0191-1ccwA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=39 Number of alignments=12 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1dxeA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 40 :GFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 28 clashes (null) has 28 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.55229 Ang F38.CD2 and V40.C other bump:2.83109 Ang F38.CE2 and V40.C other bump:1.53479 Ang F38.CD2 and V40.O other bump:1.81821 Ang F38.CE2 and V40.O neighbor-bump: 2.66258 Ang D39.OD1 and V40.CG2 other bump:3.15164 Ang F38.CD2 and V40.CA other bump:2.62262 Ang F38.CD2 and V40.N other bump:3.05262 Ang F38.CE2 and V40.N other bump:2.56212 Ang T3.CA and N32.OD1 other bump:1.02545 Ang T3.O and N32.OD1 other bump:1.92824 Ang T3.C and N32.OD1 other bump:2.17056 Ang T3.O and N32.CG other bump:3.14672 Ang T3.C and N32.CG self-bump: 1.26174 Ang D28.CA and D28.CB other bump:2.60616 Ang I6.CG2 and K27.NZ neighbor-bump: 2.23661 Ang S18.OG and P19.CD other bump:2.42359 Ang S16.OG and P19.CD other bump:2.47901 Ang V13.CG1 and H15.CE1 other bump:2.94667 Ang V13.CB and H15.ND1 other bump:2.24519 Ang V13.CG1 and H15.ND1 neighbor-bump: 2.60536 Ang H11.N and P12.CD neighbor-bump: 1.65074 Ang H11.C and P12.CD self-bump: 1.27382 Ang P12.N and P12.CD neighbor-bump: 2.06457 Ang H11.CA and P12.CD neighbor-bump: 2.16504 Ang H11.CB and P12.CD neighbor-bump: 2.71985 Ang H11.C and P12.CG self-bump: 2.1372 Ang P12.N and P12.CG neighbor-bump: 3.10009 Ang H11.CB and P12.CG T0191 47 :NLKYVIDGAKALGIVGFNVTI 1dxeA 79 :NEPVIIKRLLDIGFYNFLIPF Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 T0191 68 :PHKIEIM 1dxeA 101 :ETKEEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues other bump:3.14493 Ang H3.ND1 and I5.CD1 other bump:2.59828 Ang H3.CE1 and I5.CD1 other bump:2.76294 Ang H3.ND1 and I5.CG1 other bump:2.5334 Ang H3.CE1 and I5.CG1 other bump:2.82097 Ang H3.ND1 and I5.CB other bump:3.16027 Ang H3.ND1 and I5.CA other bump:2.42326 Ang H3.ND1 and I5.N Number of specific fragments= 3 total=42 Number of alignments=13 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1dxeA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 43 :WLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.55229 Ang F35.CD2 and V37.C other bump:2.83109 Ang F35.CE2 and V37.C other bump:1.53479 Ang F35.CD2 and V37.O other bump:1.81821 Ang F35.CE2 and V37.O neighbor-bump: 2.66258 Ang D36.OD1 and V37.CG2 other bump:3.15164 Ang F35.CD2 and V37.CA other bump:2.62262 Ang F35.CD2 and V37.N other bump:3.05262 Ang F35.CE2 and V37.N self-bump: 1.26174 Ang D25.CA and D25.CB other bump:2.60616 Ang I3.CG2 and K24.NZ neighbor-bump: 2.23661 Ang S15.OG and P16.CD other bump:2.42359 Ang S13.OG and P16.CD other bump:2.47901 Ang V10.CG1 and H12.CE1 other bump:2.94667 Ang V10.CB and H12.ND1 other bump:2.24519 Ang V10.CG1 and H12.ND1 neighbor-bump: 2.60536 Ang H8.N and P9.CD neighbor-bump: 1.65074 Ang H8.C and P9.CD self-bump: 1.27382 Ang P9.N and P9.CD neighbor-bump: 2.06457 Ang H8.CA and P9.CD neighbor-bump: 2.16504 Ang H8.CB and P9.CD neighbor-bump: 2.71985 Ang H8.C and P9.CG self-bump: 2.1372 Ang P9.N and P9.CG neighbor-bump: 3.10009 Ang H8.CB and P9.CG T0191 47 :NLKYVIDGAKALGIVGFNV 1dxeA 79 :NEPVIIKRLLDIGFYNFLI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 Number of specific fragments= 2 total=44 Number of alignments=14 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1qnf read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLP 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEP Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 T0191 46 :ENLKYVIDGAKALGIVGFNV 1qnf 108 :DRDGQVAAALKTAGIRAVQL Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.97158 Ang F19.CD1 and V21.CG1 other bump:2.08799 Ang F19.CE1 and V21.CG1 other bump:2.99565 Ang F19.CZ and V21.CG1 Number of specific fragments= 3 total=47 Number of alignments=15 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1qnf read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLP 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEP Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 T0191 46 :ENLKYVIDGAKALGIVGFNV 1qnf 108 :DRDGQVAAALKTAGIRAVQL Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.97158 Ang F19.CD1 and V21.CG1 other bump:2.08799 Ang F19.CE1 and V21.CG1 other bump:2.99565 Ang F19.CZ and V21.CG1 Number of specific fragments= 3 total=50 Number of alignments=16 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1jr2A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYL 1jr2A 55 :DYGGLIFTSPRAVEAAELC Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=53 Number of alignments=17 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1jr2A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 46 :ENLKYVIDGAKAL 1jr2A 41 :LSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:1.60722 Ang Y6.O and D9.OD1 other bump:2.46644 Ang Y6.C and D9.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEI 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=56 Number of alignments=18 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1dl5A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 2 :INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 41 :YEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 143 clashes (null) has 143 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L48.CG and L77.C other bump:1.84821 Ang L48.CD1 and L77.C other bump:3.12638 Ang L48.CD2 and L77.C other bump:1.69168 Ang L48.CD1 and L77.O other bump:2.90966 Ang L48.CG and L77.CD2 other bump:1.96333 Ang L48.CD2 and L77.CD2 other bump:2.54346 Ang N47.O and L77.CD1 other bump:1.39099 Ang L48.CB and L77.CD1 other bump:0.877304 Ang L48.CG and L77.CD1 other bump:2.34478 Ang L48.CD1 and L77.CD1 other bump:1.26848 Ang L48.CD2 and L77.CD1 other bump:2.66744 Ang N47.C and L77.CD1 other bump:2.54403 Ang L48.N and L77.CD1 other bump:2.14776 Ang L48.CA and L77.CD1 other bump:2.86835 Ang L48.CB and L77.CG other bump:1.58786 Ang L48.CG and L77.CG other bump:2.55716 Ang L48.CD1 and L77.CG other bump:0.931064 Ang L48.CD2 and L77.CG other bump:2.09646 Ang L48.CG and L77.CB other bump:2.48671 Ang L48.CD1 and L77.CB other bump:2.35977 Ang L48.CD2 and L77.CB other bump:2.28694 Ang L48.CG and L77.CA other bump:1.65424 Ang L48.CD1 and L77.CA other bump:3.02711 Ang L48.CD2 and L77.CA other bump:2.47286 Ang E72.O and Y76.CD1 other bump:2.37889 Ang P68.CA and M74.CE other bump:0.346255 Ang P68.O and M74.CE other bump:1.18355 Ang P68.C and M74.CE other bump:2.16934 Ang H69.N and M74.CE other bump:2.74892 Ang H69.CA and M74.CE other bump:2.73975 Ang P68.N and M74.CE other bump:1.54438 Ang P68.O and M74.SD other bump:2.68438 Ang P68.C and M74.SD other bump:2.65776 Ang P68.CB and M74.CG other bump:2.65885 Ang P68.CG and M74.CG other bump:2.4478 Ang P68.O and M74.CG other bump:3.01227 Ang P68.C and M74.CG other bump:3.25508 Ang E17.CD and I73.CG2 other bump:2.56697 Ang E17.OE2 and I73.CG2 other bump:1.72582 Ang P15.CD and K70.NZ other bump:2.14694 Ang P15.CG and K70.NZ other bump:1.42343 Ang P15.CD and K70.CE other bump:2.15505 Ang P15.CG and K70.CE other bump:2.89144 Ang P15.CD and K70.CD other bump:2.99319 Ang P45.CG and P68.N other bump:2.27726 Ang P45.CG and I67.C other bump:2.49857 Ang P45.CD and I67.C other bump:2.028 Ang P45.CG and I67.O other bump:1.54629 Ang P45.CD and I67.O other bump:2.87652 Ang F41.CE1 and I67.CG2 other bump:3.07801 Ang F41.CZ and I67.CG2 other bump:2.92363 Ang P45.CG and I67.CA other bump:2.60645 Ang P45.CG and I67.N other bump:3.06021 Ang P45.CG and T66.C other bump:2.27434 Ang V51.CG2 and T66.OG1 other bump:2.87399 Ang P45.CA and T66.CG2 other bump:2.26825 Ang P45.CB and T66.CG2 other bump:2.36814 Ang P45.CG and T66.CG2 other bump:3.04294 Ang D42.OD2 and T66.CG2 other bump:2.94302 Ang F63.CZ and V65.CG2 other bump:2.88874 Ang F63.CD2 and V65.CG2 other bump:1.99187 Ang F63.CE2 and V65.CG2 other bump:2.71235 Ang A55.CA and N64.ND2 other bump:2.48756 Ang Y38.O and L58.CD2 other bump:2.79002 Ang L34.CD1 and L58.CD1 other bump:2.66508 Ang D42.OD2 and V51.CG2 other bump:2.62382 Ang F29.CG and Y50.OH other bump:1.76498 Ang F29.CD1 and Y50.OH other bump:1.32034 Ang F29.CE1 and Y50.OH other bump:2.79851 Ang F29.CE2 and Y50.OH other bump:2.02665 Ang F29.CZ and Y50.OH other bump:2.9775 Ang H25.ND1 and Y50.CZ other bump:1.8034 Ang F29.CE1 and Y50.CZ other bump:2.75713 Ang F29.CE2 and Y50.CZ other bump:1.70492 Ang F29.CZ and Y50.CZ other bump:2.15623 Ang F29.CE1 and Y50.CE2 other bump:2.15759 Ang F29.CZ and Y50.CE2 other bump:2.50693 Ang H25.CB and Y50.CE1 other bump:2.6895 Ang H25.CG and Y50.CE1 other bump:2.21061 Ang H25.ND1 and Y50.CE1 other bump:3.01171 Ang F29.CE1 and Y50.CE1 other bump:2.94243 Ang F29.CE2 and Y50.CE1 other bump:2.39965 Ang F29.CZ and Y50.CE1 other bump:3.01702 Ang F29.CZ and Y50.CD2 other bump:2.01884 Ang H25.ND1 and Y50.CD1 neighbor-bump: 2.6735 Ang N47.O and L48.CD1 neighbor-bump: 2.20769 Ang N47.O and L48.CG neighbor-bump: 2.61795 Ang N47.C and L48.CG neighbor-bump: 1.82484 Ang N47.O and L48.CB neighbor-bump: 2.31819 Ang N47.C and L48.CB other bump:2.52485 Ang I9.CD1 and N47.OD1 other bump:2.61465 Ang I9.CD1 and N47.CG other bump:3.09296 Ang I9.CD1 and N47.CB other bump:2.76505 Ang E17.OE1 and N47.CB other bump:2.63237 Ang E17.CD and N47.N other bump:2.27582 Ang E17.OE2 and N47.N other bump:2.98758 Ang E17.CD and E46.C other bump:2.0636 Ang E17.OE2 and E46.C other bump:2.786 Ang E17.CA and E46.OE2 other bump:2.60153 Ang E17.C and E46.OE1 other bump:1.90329 Ang E17.CA and E46.OE1 other bump:0.963982 Ang E17.CG and E46.OE1 other bump:2.26663 Ang E17.CD and E46.OE1 other bump:1.17636 Ang E17.CB and E46.OE1 other bump:2.65608 Ang E17.CA and E46.CD other bump:1.92151 Ang E17.CG and E46.CD other bump:2.87261 Ang E17.CD and E46.CD other bump:2.29419 Ang E17.CB and E46.CD other bump:2.59124 Ang E17.CG and E46.CG other bump:2.76792 Ang E17.CD and E46.CG other bump:2.20008 Ang E17.OE2 and E46.CG other bump:2.46728 Ang E17.CG and E46.CB other bump:1.96135 Ang E17.CD and E46.CB other bump:1.20791 Ang E17.OE2 and E46.CB self-bump: 1.25601 Ang E46.CA and E46.CB other bump:2.907 Ang E17.CD and E46.CA other bump:1.88673 Ang E17.OE2 and E46.CA self-bump: 1.32748 Ang P45.N and P45.CD neighbor-bump: 2.5325 Ang L44.N and P45.CD self-bump: 2.19717 Ang P45.N and P45.CG neighbor-bump: 2.53999 Ang V43.C and L44.CB neighbor-bump: 2.25913 Ang V43.O and L44.CB other bump:2.67598 Ang N35.CB and Y38.CE2 other bump:2.47929 Ang N35.O and Y38.CD2 other bump:3.05107 Ang N35.C and Y38.CD2 neighbor-bump: 2.20027 Ang Y36.O and V37.CB neighbor-bump: 2.49905 Ang Y36.C and V37.CB other bump:1.97978 Ang A27.O and D31.OD2 other bump:2.7039 Ang A27.C and D31.OD2 other bump:2.06335 Ang F20.CB and H25.NE2 other bump:2.22916 Ang F20.CG and H25.NE2 other bump:2.60075 Ang F20.CD2 and H25.NE2 other bump:2.94194 Ang F20.CD2 and H25.CE1 other bump:2.51453 Ang F20.CB and H25.CD2 other bump:2.42018 Ang I9.CG1 and E17.OE1 other bump:1.89522 Ang I9.CD1 and E17.OE1 other bump:3.0744 Ang I9.CG1 and E17.CD other bump:2.47201 Ang I9.CD1 and E17.CD other bump:3.01406 Ang I9.CG1 and E17.CG other bump:2.06622 Ang G1.O and K7.NZ other bump:2.87276 Ang G1.C and K7.NZ other bump:2.43982 Ang G1.O and K7.CE other bump:3.09508 Ang G1.C and K7.CE T0191 81 :DKDAQLIGAVNTIKI 1dl5A 117 :KRNVERLGIENVIFV Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 96 :EDGK 1dl5A 133 :GDGY Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues neighbor-bump: 2.33088 Ang G1.O and E2.CG T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues Number of specific fragments= 5 total=61 Number of alignments=19 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1dl5A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dl5A/T0191-1dl5A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 2 :INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 41 :YEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 143 clashes (null) has 143 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L48.CG and L77.C other bump:1.84821 Ang L48.CD1 and L77.C other bump:3.12638 Ang L48.CD2 and L77.C other bump:1.69168 Ang L48.CD1 and L77.O other bump:2.90966 Ang L48.CG and L77.CD2 other bump:1.96333 Ang L48.CD2 and L77.CD2 other bump:2.54346 Ang N47.O and L77.CD1 other bump:1.39099 Ang L48.CB and L77.CD1 other bump:0.877304 Ang L48.CG and L77.CD1 other bump:2.34478 Ang L48.CD1 and L77.CD1 other bump:1.26848 Ang L48.CD2 and L77.CD1 other bump:2.66744 Ang N47.C and L77.CD1 other bump:2.54403 Ang L48.N and L77.CD1 other bump:2.14776 Ang L48.CA and L77.CD1 other bump:2.86835 Ang L48.CB and L77.CG other bump:1.58786 Ang L48.CG and L77.CG other bump:2.55716 Ang L48.CD1 and L77.CG other bump:0.931064 Ang L48.CD2 and L77.CG other bump:2.09646 Ang L48.CG and L77.CB other bump:2.48671 Ang L48.CD1 and L77.CB other bump:2.35977 Ang L48.CD2 and L77.CB other bump:2.28694 Ang L48.CG and L77.CA other bump:1.65424 Ang L48.CD1 and L77.CA other bump:3.02711 Ang L48.CD2 and L77.CA other bump:2.47286 Ang E72.O and Y76.CD1 other bump:2.37889 Ang P68.CA and M74.CE other bump:0.346255 Ang P68.O and M74.CE other bump:1.18355 Ang P68.C and M74.CE other bump:2.16934 Ang H69.N and M74.CE other bump:2.74892 Ang H69.CA and M74.CE other bump:2.73975 Ang P68.N and M74.CE other bump:1.54438 Ang P68.O and M74.SD other bump:2.68438 Ang P68.C and M74.SD other bump:2.65776 Ang P68.CB and M74.CG other bump:2.65885 Ang P68.CG and M74.CG other bump:2.4478 Ang P68.O and M74.CG other bump:3.01227 Ang P68.C and M74.CG other bump:3.25508 Ang E17.CD and I73.CG2 other bump:2.56697 Ang E17.OE2 and I73.CG2 other bump:1.72582 Ang P15.CD and K70.NZ other bump:2.14694 Ang P15.CG and K70.NZ other bump:1.42343 Ang P15.CD and K70.CE other bump:2.15505 Ang P15.CG and K70.CE other bump:2.89144 Ang P15.CD and K70.CD other bump:2.99319 Ang P45.CG and P68.N other bump:2.27726 Ang P45.CG and I67.C other bump:2.49857 Ang P45.CD and I67.C other bump:2.028 Ang P45.CG and I67.O other bump:1.54629 Ang P45.CD and I67.O other bump:2.87652 Ang F41.CE1 and I67.CG2 other bump:3.07801 Ang F41.CZ and I67.CG2 other bump:2.92363 Ang P45.CG and I67.CA other bump:2.60645 Ang P45.CG and I67.N other bump:3.06021 Ang P45.CG and T66.C other bump:2.27434 Ang V51.CG2 and T66.OG1 other bump:2.87399 Ang P45.CA and T66.CG2 other bump:2.26825 Ang P45.CB and T66.CG2 other bump:2.36814 Ang P45.CG and T66.CG2 other bump:3.04294 Ang D42.OD2 and T66.CG2 other bump:2.94302 Ang F63.CZ and V65.CG2 other bump:2.88874 Ang F63.CD2 and V65.CG2 other bump:1.99187 Ang F63.CE2 and V65.CG2 other bump:2.71235 Ang A55.CA and N64.ND2 other bump:2.48756 Ang Y38.O and L58.CD2 other bump:2.79002 Ang L34.CD1 and L58.CD1 other bump:2.66508 Ang D42.OD2 and V51.CG2 other bump:2.62382 Ang F29.CG and Y50.OH other bump:1.76498 Ang F29.CD1 and Y50.OH other bump:1.32034 Ang F29.CE1 and Y50.OH other bump:2.79851 Ang F29.CE2 and Y50.OH other bump:2.02665 Ang F29.CZ and Y50.OH other bump:2.9775 Ang H25.ND1 and Y50.CZ other bump:1.8034 Ang F29.CE1 and Y50.CZ other bump:2.75713 Ang F29.CE2 and Y50.CZ other bump:1.70492 Ang F29.CZ and Y50.CZ other bump:2.15623 Ang F29.CE1 and Y50.CE2 other bump:2.15759 Ang F29.CZ and Y50.CE2 other bump:2.50693 Ang H25.CB and Y50.CE1 other bump:2.6895 Ang H25.CG and Y50.CE1 other bump:2.21061 Ang H25.ND1 and Y50.CE1 other bump:3.01171 Ang F29.CE1 and Y50.CE1 other bump:2.94243 Ang F29.CE2 and Y50.CE1 other bump:2.39965 Ang F29.CZ and Y50.CE1 other bump:3.01702 Ang F29.CZ and Y50.CD2 other bump:2.01884 Ang H25.ND1 and Y50.CD1 neighbor-bump: 2.6735 Ang N47.O and L48.CD1 neighbor-bump: 2.20769 Ang N47.O and L48.CG neighbor-bump: 2.61795 Ang N47.C and L48.CG neighbor-bump: 1.82484 Ang N47.O and L48.CB neighbor-bump: 2.31819 Ang N47.C and L48.CB other bump:2.52485 Ang I9.CD1 and N47.OD1 other bump:2.61465 Ang I9.CD1 and N47.CG other bump:3.09296 Ang I9.CD1 and N47.CB other bump:2.76505 Ang E17.OE1 and N47.CB other bump:2.63237 Ang E17.CD and N47.N other bump:2.27582 Ang E17.OE2 and N47.N other bump:2.98758 Ang E17.CD and E46.C other bump:2.0636 Ang E17.OE2 and E46.C other bump:2.786 Ang E17.CA and E46.OE2 other bump:2.60153 Ang E17.C and E46.OE1 other bump:1.90329 Ang E17.CA and E46.OE1 other bump:0.963982 Ang E17.CG and E46.OE1 other bump:2.26663 Ang E17.CD and E46.OE1 other bump:1.17636 Ang E17.CB and E46.OE1 other bump:2.65608 Ang E17.CA and E46.CD other bump:1.92151 Ang E17.CG and E46.CD other bump:2.87261 Ang E17.CD and E46.CD other bump:2.29419 Ang E17.CB and E46.CD other bump:2.59124 Ang E17.CG and E46.CG other bump:2.76792 Ang E17.CD and E46.CG other bump:2.20008 Ang E17.OE2 and E46.CG other bump:2.46728 Ang E17.CG and E46.CB other bump:1.96135 Ang E17.CD and E46.CB other bump:1.20791 Ang E17.OE2 and E46.CB self-bump: 1.25601 Ang E46.CA and E46.CB other bump:2.907 Ang E17.CD and E46.CA other bump:1.88673 Ang E17.OE2 and E46.CA self-bump: 1.32748 Ang P45.N and P45.CD neighbor-bump: 2.5325 Ang L44.N and P45.CD self-bump: 2.19717 Ang P45.N and P45.CG neighbor-bump: 2.53999 Ang V43.C and L44.CB neighbor-bump: 2.25913 Ang V43.O and L44.CB other bump:2.67598 Ang N35.CB and Y38.CE2 other bump:2.47929 Ang N35.O and Y38.CD2 other bump:3.05107 Ang N35.C and Y38.CD2 neighbor-bump: 2.20027 Ang Y36.O and V37.CB neighbor-bump: 2.49905 Ang Y36.C and V37.CB other bump:1.97978 Ang A27.O and D31.OD2 other bump:2.7039 Ang A27.C and D31.OD2 other bump:2.06335 Ang F20.CB and H25.NE2 other bump:2.22916 Ang F20.CG and H25.NE2 other bump:2.60075 Ang F20.CD2 and H25.NE2 other bump:2.94194 Ang F20.CD2 and H25.CE1 other bump:2.51453 Ang F20.CB and H25.CD2 other bump:2.42018 Ang I9.CG1 and E17.OE1 other bump:1.89522 Ang I9.CD1 and E17.OE1 other bump:3.0744 Ang I9.CG1 and E17.CD other bump:2.47201 Ang I9.CD1 and E17.CD other bump:3.01406 Ang I9.CG1 and E17.CG other bump:2.06622 Ang G1.O and K7.NZ other bump:2.87276 Ang G1.C and K7.NZ other bump:2.43982 Ang G1.O and K7.CE other bump:3.09508 Ang G1.C and K7.CE T0191 81 :DKDAQLIGAVNTIKI 1dl5A 117 :KRNVERLGIENVIFV Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 96 :EDG 1dl5A 133 :GDG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues neighbor-bump: 2.33088 Ang G1.O and E2.CG T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 108 :IG 1dl5A 315 :CS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 6 total=67 Number of alignments=20 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1a99A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=69 Number of alignments=21 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1a99A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 5 :KTKVIGL 1a99A 30 :KTLHIYN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 16 :VEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 37 :WSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 63 clashes (null) has 63 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:3.09447 Ang F15.CZ and Y22.C other bump:2.89904 Ang F15.CD2 and Y22.CE2 other bump:2.93264 Ang F15.CG and Y22.CD2 other bump:2.29811 Ang F15.CD2 and Y22.CD2 other bump:1.91288 Ang F15.CE2 and Y22.CD2 other bump:2.30571 Ang F15.CZ and Y22.CD2 other bump:2.22132 Ang H11.CE1 and Y22.CG other bump:2.48312 Ang F15.CE2 and Y22.CG other bump:2.90643 Ang H11.ND1 and Y22.CB other bump:1.61187 Ang H11.CE1 and Y22.CB other bump:1.97413 Ang H11.NE2 and Y22.CB other bump:2.81027 Ang F15.CE1 and Y22.CB other bump:2.60979 Ang F15.CE2 and Y22.CB other bump:1.84125 Ang F15.CZ and Y22.CB other bump:2.89534 Ang H11.NE2 and Y22.CA other bump:2.6286 Ang F15.CE2 and Y22.CA other bump:2.21613 Ang F15.CZ and Y22.CA other bump:1.79891 Ang F15.CE2 and Y22.N other bump:2.0426 Ang F15.CZ and Y22.N other bump:2.49519 Ang F15.CE2 and N21.C other bump:3.236 Ang F15.CZ and N21.C other bump:2.90131 Ang F15.CE2 and N21.CA other bump:3.0095 Ang F15.CD2 and L20.C other bump:3.28467 Ang F15.CE2 and L20.C other bump:1.90272 Ang F15.CD2 and L20.O other bump:2.51584 Ang F15.CE2 and L20.O other bump:2.27138 Ang A13.O and D17.OD2 other bump:2.90917 Ang H11.CD2 and F15.CZ other bump:2.40639 Ang H11.CE1 and F15.CZ other bump:1.99186 Ang H11.NE2 and F15.CZ other bump:2.82281 Ang H11.CG and F15.CE1 other bump:2.0954 Ang H11.CD2 and F15.CE1 other bump:3.02144 Ang H11.ND1 and F15.CE1 other bump:2.52401 Ang H11.CE1 and F15.CE1 other bump:1.87048 Ang H11.NE2 and F15.CE1 other bump:2.77613 Ang F6.CE2 and H11.N other bump:3.23445 Ang F6.CZ and H11.N other bump:3.0576 Ang F6.CE2 and M10.C other bump:2.99218 Ang F6.CZ and M10.C other bump:2.74202 Ang S7.N and M10.CE other bump:1.93071 Ang F6.CG and M10.CE other bump:2.74293 Ang F6.CD2 and M10.CE other bump:2.51372 Ang F6.CZ and M10.CE other bump:1.08514 Ang F6.CD1 and M10.CE other bump:1.58421 Ang F6.CE1 and M10.CE other bump:2.74828 Ang F6.CG and M10.SD other bump:3.19275 Ang F6.CD2 and M10.SD other bump:2.8116 Ang F6.CE2 and M10.SD other bump:1.70162 Ang F6.CZ and M10.SD other bump:1.56886 Ang F6.CD1 and M10.SD other bump:0.43463 Ang F6.CE1 and M10.SD other bump:2.68878 Ang F6.CE2 and M10.CG other bump:1.40489 Ang F6.CZ and M10.CG other bump:1.73586 Ang F6.CE1 and M10.CG other bump:2.97084 Ang F6.CD2 and M10.CB other bump:1.91184 Ang F6.CE2 and M10.CB other bump:1.43951 Ang F6.CZ and M10.CB other bump:2.37401 Ang F6.CE1 and M10.CB other bump:2.86443 Ang F6.CE2 and M10.CA other bump:2.70625 Ang F6.CZ and M10.CA other bump:2.11573 Ang V2.O and S5.OG other bump:2.83282 Ang V2.CG2 and S5.OG other bump:2.78447 Ang V2.CG2 and S5.CB T0191 49 :KYVIDGAKALGIVGFNVTIPHK 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 3 total=72 Number of alignments=22 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1j97A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=74 Number of alignments=23 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1j97A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=76 Number of alignments=24 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1f5sA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=78 Number of alignments=25 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1f5sA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=80 Number of alignments=26 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 8abp read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 8abp 3 :LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.18907 Ang V35.CG2 and F37.CZ other bump:2.9422 Ang V35.CB and F37.CE1 other bump:1.80264 Ang V35.CG2 and F37.CE1 other bump:1.77184 Ang G6.CA and Y34.OH other bump:2.56053 Ang G6.C and Y34.OH other bump:2.92897 Ang G6.N and Y34.CZ other bump:2.33569 Ang G6.CA and Y34.CZ other bump:3.08826 Ang I5.C and Y34.CE1 other bump:2.83511 Ang G6.N and Y34.CE1 other bump:2.71666 Ang G6.CA and Y34.CE1 other bump:2.4208 Ang D27.OD1 and Y34.CB other bump:2.63074 Ang D27.CB and Y32.O other bump:2.51701 Ang K26.CB and Y32.OH other bump:3.17418 Ang D27.CA and Y32.CZ other bump:2.56683 Ang D27.OD2 and Y32.CZ other bump:2.41692 Ang D27.CG and Y32.CE1 other bump:1.34273 Ang D27.OD2 and Y32.CE1 other bump:1.50163 Ang D27.OD2 and Y32.CD1 other bump:2.73754 Ang D27.OD2 and Y32.CG neighbor-bump: 2.27112 Ang L30.O and N31.CB neighbor-bump: 2.6169 Ang L30.C and N31.CB other bump:2.83215 Ang H21.CE1 and F25.CZ other bump:2.6895 Ang H21.NE2 and F25.CZ other bump:2.77221 Ang H21.CD2 and F25.CE1 other bump:2.66368 Ang H21.CE1 and F25.CE1 other bump:2.14058 Ang H21.NE2 and F25.CE1 other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79435 Ang H14.O and P18.CG other bump:2.92353 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDK 8abp 42 :DGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARG Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.46951 Ang F21.CZ and I38.CD1 other bump:2.92979 Ang F21.CE1 and I38.CG1 other bump:2.73556 Ang F21.CZ and I38.CG1 other bump:2.69437 Ang I10.CB and E37.OE2 other bump:1.96453 Ang L6.CD1 and Y34.OH other bump:3.00472 Ang I25.CD1 and Y34.OH other bump:3.15217 Ang I25.CG1 and Y34.CZ other bump:2.63588 Ang I25.CD1 and Y34.CZ other bump:2.92171 Ang E30.CB and Y34.CZ other bump:3.1157 Ang L6.CB and Y34.CE2 other bump:2.85321 Ang I25.CG1 and Y34.CE1 other bump:1.73098 Ang I25.CD1 and Y34.CE1 other bump:2.19221 Ang E30.CB and Y34.CE1 other bump:2.57349 Ang E30.O and Y34.CD1 other bump:2.60608 Ang I25.CD1 and Y34.CD1 other bump:2.70918 Ang K7.CE and K33.CD other bump:2.30475 Ang K7.NZ and K33.CD neighbor-bump: 2.72325 Ang I31.CG2 and M32.N other bump:2.3619 Ang H27.CB and E30.OE2 other bump:2.28552 Ang H27.CA and E30.OE1 other bump:1.30524 Ang H27.O and E30.OE1 other bump:1.97864 Ang H27.C and E30.OE1 other bump:2.64681 Ang H27.CB and E30.OE1 other bump:3.04718 Ang H27.CA and E30.CD other bump:2.53966 Ang H27.O and E30.CD other bump:3.14082 Ang H27.C and E30.CD other bump:2.83555 Ang H27.CB and E30.CD other bump:2.53333 Ang I25.CD1 and E30.CB other bump:2.45805 Ang H27.CE1 and I29.CD1 other bump:2.94003 Ang H27.CE1 and I29.CG1 other bump:2.87603 Ang H27.ND1 and I29.CB other bump:2.83507 Ang H27.CE1 and I29.CB other bump:2.20284 Ang L6.CD1 and P26.CD neighbor-bump: 2.94794 Ang I25.CG1 and P26.CD other bump:2.53746 Ang L6.CD1 and P26.CG other bump:2.64379 Ang I18.CG2 and G20.O other bump:3.05624 Ang A13.CB and I18.CD1 other bump:2.48977 Ang N5.O and V9.CG2 other bump:2.8389 Ang E4.OE2 and Y8.CZ other bump:2.30477 Ang E4.OE2 and Y8.CE1 other bump:2.64155 Ang E4.O and Y8.CD1 self-bump: 1.38331 Ang P3.N and P3.CD T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 3 total=83 Number of alignments=27 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 8abp read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/8abp/T0191-8abp-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSP 8abp 3 :LKLGFLVKQPEEPWFQT Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79434 Ang H14.O and P18.CG other bump:2.92352 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIMKY 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPDPKLGSAI Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 34 residues other bump:2.14621 Ang L5.CG and Y33.OH other bump:1.93329 Ang L5.CB and Y33.OH other bump:1.65662 Ang L5.CD1 and Y33.OH other bump:2.83104 Ang L5.CB and Y33.CZ other bump:2.99609 Ang L5.CB and Y33.CE2 other bump:2.2937 Ang I24.CD1 and Y33.CE1 other bump:2.69115 Ang E29.CB and Y33.CE1 other bump:2.87987 Ang I9.CD1 and Y33.CD2 other bump:2.81548 Ang I24.CD1 and Y33.CD1 other bump:2.70918 Ang K6.CE and K32.CD other bump:2.30475 Ang K6.NZ and K32.CD neighbor-bump: 2.72325 Ang I30.CG2 and M31.N other bump:2.3619 Ang H26.CB and E29.OE2 other bump:2.28552 Ang H26.CA and E29.OE1 other bump:1.30524 Ang H26.O and E29.OE1 other bump:1.97864 Ang H26.C and E29.OE1 other bump:2.64681 Ang H26.CB and E29.OE1 other bump:3.04718 Ang H26.CA and E29.CD other bump:2.53966 Ang H26.O and E29.CD other bump:3.14082 Ang H26.C and E29.CD other bump:2.83555 Ang H26.CB and E29.CD other bump:2.53333 Ang I24.CD1 and E29.CB other bump:2.45805 Ang H26.CE1 and I28.CD1 other bump:2.94003 Ang H26.CE1 and I28.CG1 other bump:2.87603 Ang H26.ND1 and I28.CB other bump:2.83507 Ang H26.CE1 and I28.CB other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD T0191 81 :DKDAQLIGA 8abp 75 :VAKARGYDM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 5 total=88 Number of alignments=28 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1qnf read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIGHPVEHSFS 1qnf 2 :AAPILFWHRRDLRLSDN Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.9605 Ang I9.CG1 and V13.CG2 other bump:2.40865 Ang I9.CD1 and V13.CG2 other bump:3.09421 Ang I9.CD1 and V13.CA neighbor-bump: 2.23252 Ang H11.N and P12.CD neighbor-bump: 1.70559 Ang H11.O and P12.CD neighbor-bump: 1.84181 Ang H11.CA and P12.CD neighbor-bump: 2.60452 Ang H11.CB and P12.CD neighbor-bump: 0.957255 Ang H11.C and P12.CD neighbor-bump: 2.15771 Ang H11.O and P12.CG neighbor-bump: 2.18665 Ang H11.C and P12.CG neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 25 :HNAAFKDKGLNYVYVAFDVLPENL 1qnf 19 :IGLAAARAQSAQLIGLFCLDPQIL Fragment has 15 clashes (null) has 15 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.43401 Ang V20.CG1 and L25.CD1 other bump:2.24959 Ang Y13.CE1 and Y15.OH other bump:2.19762 Ang Y13.CZ and Y15.OH other bump:3.00208 Ang Y13.CE2 and Y15.OH other bump:2.85307 Ang L11.CD2 and Y13.C other bump:2.15589 Ang L11.CD2 and Y13.O other bump:2.27812 Ang H2.CE1 and F6.CZ other bump:2.32562 Ang H2.NE2 and F6.CZ other bump:2.87298 Ang H2.CG and F6.CE1 other bump:2.81058 Ang H2.CD2 and F6.CE1 other bump:1.30514 Ang H2.CE1 and F6.CE1 other bump:1.94223 Ang H2.NE2 and F6.CE1 other bump:2.07064 Ang H2.ND1 and F6.CE1 other bump:2.35525 Ang H2.CE1 and F6.CD1 other bump:2.4803 Ang H2.ND1 and F6.CD1 T0191 49 :KYVIDGAKA 1qnf 49 :PARVAYLQG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 76 :YLDEIDKDAQLIGA 1qnf 58 :CLQELQQRYQQAGS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues Number of specific fragments= 4 total=92 Number of alignments=29 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1qnf read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1qnf/T0191-1qnf-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIGHPVEHSFS 1qnf 2 :AAPILFWHRRDLRLSDN Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.9605 Ang I9.CG1 and V13.CG2 other bump:2.40865 Ang I9.CD1 and V13.CG2 other bump:3.09421 Ang I9.CD1 and V13.CA neighbor-bump: 2.23252 Ang H11.N and P12.CD neighbor-bump: 1.70559 Ang H11.O and P12.CD neighbor-bump: 1.84181 Ang H11.CA and P12.CD neighbor-bump: 2.60452 Ang H11.CB and P12.CD neighbor-bump: 0.957255 Ang H11.C and P12.CD neighbor-bump: 2.15771 Ang H11.O and P12.CG neighbor-bump: 2.18665 Ang H11.C and P12.CG neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 25 :HNAAFKDKGLNYVYVAFDVLPEN 1qnf 19 :IGLAAARAQSAQLIGLFCLDPQI Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.24959 Ang Y13.CE1 and Y15.OH other bump:2.19762 Ang Y13.CZ and Y15.OH other bump:3.00208 Ang Y13.CE2 and Y15.OH other bump:2.85307 Ang L11.CD2 and Y13.C other bump:2.15589 Ang L11.CD2 and Y13.O other bump:2.27812 Ang H2.CE1 and F6.CZ other bump:2.32562 Ang H2.NE2 and F6.CZ other bump:1.30514 Ang H2.CE1 and F6.CE1 other bump:2.87298 Ang H2.CG and F6.CE1 other bump:2.81058 Ang H2.CD2 and F6.CE1 other bump:1.94223 Ang H2.NE2 and F6.CE1 other bump:2.07064 Ang H2.ND1 and F6.CE1 other bump:2.35525 Ang H2.CE1 and F6.CD1 other bump:2.4803 Ang H2.ND1 and F6.CD1 T0191 55 :AKALGI 1qnf 42 :LQSADM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 67 :IPHKIEIMK 1qnf 48 :APARVAYLQ Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.76776 Ang H4.NE2 and I8.CD1 other bump:2.381 Ang P3.O and E7.OE2 other bump:0.729307 Ang P3.O and E7.OE1 other bump:1.77994 Ang P3.C and E7.OE1 other bump:2.6919 Ang H4.CA and E7.OE1 other bump:1.74366 Ang P3.O and E7.CD other bump:2.69734 Ang P3.C and E7.CD T0191 76 :YLDEIDKDAQLIGAV 1qnf 58 :CLQELQQRYQQAGSR Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues Number of specific fragments= 5 total=97 Number of alignments=30 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1dxeA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 4 :AKTKVIGLI 1dxeA 16 :AKQVQIGCW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.59069 Ang G8.O and L9.CD2 other bump:2.29123 Ang K5.CE and I7.CD1 T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 25 :SALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 104 clashes (null) has 104 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.63951 Ang K14.NZ and G43.C other bump:2.46236 Ang K14.NZ and G43.CA other bump:1.57552 Ang K14.NZ and G43.N other bump:2.7399 Ang K14.CD and L42.C other bump:1.58793 Ang K14.CE and L42.C other bump:0.540716 Ang K14.NZ and L42.C other bump:1.77479 Ang K14.CE and L42.O other bump:1.01578 Ang K14.NZ and L42.O other bump:2.71548 Ang K14.CB and L42.CD2 other bump:2.80309 Ang K14.CG and L42.CD2 other bump:2.93165 Ang K14.CD and L42.CD2 other bump:2.89363 Ang K14.CE and L42.CD2 other bump:2.91992 Ang K14.CE and L42.CG other bump:3.12498 Ang K14.CD and L42.CB other bump:1.93915 Ang K14.CE and L42.CB other bump:2.81091 Ang K14.NZ and L42.CB other bump:2.2086 Ang K14.CD and L42.CA other bump:1.23496 Ang K14.CE and L42.CA other bump:1.77282 Ang K14.NZ and L42.CA other bump:3.13991 Ang K14.CD and L42.N other bump:2.63739 Ang K14.CE and L42.N other bump:2.72765 Ang K14.CD and A41.O other bump:2.62026 Ang I7.CD1 and G38.CA other bump:1.87584 Ang I7.CD1 and G38.N other bump:2.85753 Ang I7.CG1 and D37.C other bump:1.7675 Ang I7.CD1 and D37.C other bump:2.31277 Ang I7.CD1 and D37.O other bump:2.25316 Ang I7.CG1 and D37.CB other bump:2.3076 Ang I7.CD1 and D37.CB other bump:3.07471 Ang I7.CG1 and D37.CA other bump:2.47981 Ang I7.CD1 and D37.CA other bump:2.1803 Ang F25.CE1 and V35.CG2 other bump:3.05466 Ang F25.CE2 and V35.CG2 other bump:1.76836 Ang F25.CZ and V35.CG2 other bump:2.53904 Ang P6.CA and Y34.OH other bump:2.31159 Ang S5.N and Y34.OH other bump:2.03042 Ang S5.CA and Y34.OH other bump:1.7556 Ang S5.C and Y34.OH other bump:1.18108 Ang P6.N and Y34.OH other bump:1.84275 Ang P6.CD and Y34.OH other bump:2.97336 Ang S5.CB and Y34.CZ other bump:2.69582 Ang P6.CA and Y34.CZ other bump:2.81066 Ang S5.N and Y34.CZ other bump:1.75006 Ang S5.CA and Y34.CZ other bump:1.30956 Ang S5.C and Y34.CZ other bump:1.55315 Ang P6.N and Y34.CZ other bump:2.60681 Ang P6.CD and Y34.CZ other bump:2.22117 Ang S5.O and Y34.CZ other bump:3.02483 Ang S5.CB and Y34.CE2 other bump:3.16446 Ang S5.N and Y34.CE2 other bump:2.1149 Ang S5.CA and Y34.CE2 other bump:2.46907 Ang S5.C and Y34.CE2 other bump:2.91315 Ang P6.N and Y34.CE2 other bump:2.20806 Ang P6.CA and Y34.CE1 other bump:2.52305 Ang S5.CA and Y34.CE1 other bump:1.30283 Ang S5.C and Y34.CE1 other bump:1.74705 Ang P6.N and Y34.CE1 other bump:1.33059 Ang S5.O and Y34.CE1 other bump:3.05008 Ang S5.CA and Y34.CD2 other bump:2.47699 Ang S5.C and Y34.CD1 other bump:1.96009 Ang S5.O and Y34.CD1 other bump:3.28759 Ang S5.C and Y34.CG other bump:2.54832 Ang V23.CB and E30.OE2 other bump:1.50398 Ang V23.CG1 and E30.OE2 other bump:2.70144 Ang F25.CE2 and E30.OE2 other bump:2.77194 Ang F25.CZ and E30.OE2 other bump:1.90936 Ang F25.CG and E30.OE1 other bump:2.43413 Ang F25.CD1 and E30.OE1 other bump:1.54904 Ang F25.CD2 and E30.OE1 other bump:1.88091 Ang F25.CE2 and E30.OE1 other bump:2.42143 Ang F25.CZ and E30.OE1 other bump:2.72913 Ang V23.CG1 and E30.CD other bump:2.88703 Ang F25.CG and E30.CD other bump:2.85528 Ang F25.CD1 and E30.CD other bump:2.60442 Ang F25.CD2 and E30.CD other bump:2.27686 Ang F25.CE2 and E30.CD other bump:2.25191 Ang F25.CZ and E30.CD other bump:2.65341 Ang F25.CD1 and E30.CG other bump:2.26467 Ang F25.CE1 and E30.CG other bump:2.24593 Ang S3.CB and L28.CD2 other bump:2.32056 Ang S3.CA and L28.CD1 other bump:2.39862 Ang S3.CB and L28.CD1 other bump:2.43599 Ang H2.O and L28.CD1 other bump:2.91035 Ang S3.N and L28.CD1 other bump:2.79549 Ang A24.CB and L28.CD1 other bump:3.16044 Ang S3.CA and L28.CG other bump:2.78089 Ang S3.CB and L28.CG other bump:2.89265 Ang F13.CD1 and K16.NZ other bump:2.1962 Ang F13.CE1 and K16.NZ other bump:2.33775 Ang H2.CD2 and N10.OD1 other bump:1.4628 Ang H2.NE2 and N10.OD1 other bump:2.36367 Ang H2.ND1 and N10.OD1 other bump:1.5295 Ang H2.CE1 and N10.OD1 other bump:2.24404 Ang H2.NE2 and N10.ND2 other bump:2.70125 Ang H2.ND1 and N10.ND2 other bump:1.50937 Ang H2.CE1 and N10.ND2 other bump:2.10675 Ang H2.NE2 and N10.CG other bump:1.54318 Ang H2.CE1 and N10.CG other bump:2.91586 Ang H2.CE1 and N10.CB other bump:1.75387 Ang F4.O and P6.CD other bump:2.19876 Ang F4.C and P6.CD neighbor-bump: 2.44741 Ang S5.N and P6.CD neighbor-bump: 2.43474 Ang S5.CA and P6.CD neighbor-bump: 1.78827 Ang S5.C and P6.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKIEDGK 1dxeA 85 :KRLLDIGFYNFLIPFVET Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues Number of specific fragments= 4 total=101 Number of alignments=31 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1dxeA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1dxeA/T0191-1dxeA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 4 :AKTKVIGLIG 1dxeA 16 :AKQVQIGCWS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.59069 Ang G8.O and L9.CD2 other bump:2.29123 Ang K5.CE and I7.CD1 T0191 19 :SFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 26 :ALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 94 clashes (null) has 94 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:2.63951 Ang K13.NZ and G42.C other bump:2.46236 Ang K13.NZ and G42.CA other bump:1.57552 Ang K13.NZ and G42.N other bump:2.7399 Ang K13.CD and L41.C other bump:1.58793 Ang K13.CE and L41.C other bump:0.540716 Ang K13.NZ and L41.C other bump:1.77479 Ang K13.CE and L41.O other bump:1.01578 Ang K13.NZ and L41.O other bump:2.71548 Ang K13.CB and L41.CD2 other bump:2.80309 Ang K13.CG and L41.CD2 other bump:2.93165 Ang K13.CD and L41.CD2 other bump:2.89363 Ang K13.CE and L41.CD2 other bump:2.91992 Ang K13.CE and L41.CG other bump:3.12498 Ang K13.CD and L41.CB other bump:1.93915 Ang K13.CE and L41.CB other bump:2.81091 Ang K13.NZ and L41.CB other bump:2.2086 Ang K13.CD and L41.CA other bump:1.23496 Ang K13.CE and L41.CA other bump:1.77282 Ang K13.NZ and L41.CA other bump:3.13991 Ang K13.CD and L41.N other bump:2.63739 Ang K13.CE and L41.N other bump:2.72765 Ang K13.CD and A40.O other bump:2.62026 Ang I6.CD1 and G37.CA other bump:1.87584 Ang I6.CD1 and G37.N other bump:2.85753 Ang I6.CG1 and D36.C other bump:1.7675 Ang I6.CD1 and D36.C other bump:2.31277 Ang I6.CD1 and D36.O other bump:2.25316 Ang I6.CG1 and D36.CB other bump:2.3076 Ang I6.CD1 and D36.CB other bump:3.07471 Ang I6.CG1 and D36.CA other bump:2.47981 Ang I6.CD1 and D36.CA other bump:2.1803 Ang F24.CE1 and V34.CG2 other bump:3.05466 Ang F24.CE2 and V34.CG2 other bump:1.76836 Ang F24.CZ and V34.CG2 other bump:2.53904 Ang P5.CA and Y33.OH other bump:2.31159 Ang S4.N and Y33.OH other bump:2.03042 Ang S4.CA and Y33.OH other bump:1.7556 Ang S4.C and Y33.OH other bump:1.18108 Ang P5.N and Y33.OH other bump:1.84275 Ang P5.CD and Y33.OH other bump:2.97336 Ang S4.CB and Y33.CZ other bump:2.69582 Ang P5.CA and Y33.CZ other bump:2.81066 Ang S4.N and Y33.CZ other bump:1.75006 Ang S4.CA and Y33.CZ other bump:1.30956 Ang S4.C and Y33.CZ other bump:1.55315 Ang P5.N and Y33.CZ other bump:2.60681 Ang P5.CD and Y33.CZ other bump:2.22117 Ang S4.O and Y33.CZ other bump:3.02483 Ang S4.CB and Y33.CE2 other bump:3.16446 Ang S4.N and Y33.CE2 other bump:2.1149 Ang S4.CA and Y33.CE2 other bump:2.46907 Ang S4.C and Y33.CE2 other bump:2.91315 Ang P5.N and Y33.CE2 other bump:2.20806 Ang P5.CA and Y33.CE1 other bump:2.52305 Ang S4.CA and Y33.CE1 other bump:1.30283 Ang S4.C and Y33.CE1 other bump:1.74705 Ang P5.N and Y33.CE1 other bump:1.33059 Ang S4.O and Y33.CE1 other bump:3.05008 Ang S4.CA and Y33.CD2 other bump:2.47699 Ang S4.C and Y33.CD1 other bump:1.96009 Ang S4.O and Y33.CD1 other bump:3.28759 Ang S4.C and Y33.CG other bump:2.54832 Ang V22.CB and E29.OE2 other bump:1.50398 Ang V22.CG1 and E29.OE2 other bump:2.70144 Ang F24.CE2 and E29.OE2 other bump:2.77194 Ang F24.CZ and E29.OE2 other bump:1.90936 Ang F24.CG and E29.OE1 other bump:2.43413 Ang F24.CD1 and E29.OE1 other bump:1.54904 Ang F24.CD2 and E29.OE1 other bump:1.88091 Ang F24.CE2 and E29.OE1 other bump:2.42143 Ang F24.CZ and E29.OE1 other bump:2.72913 Ang V22.CG1 and E29.CD other bump:2.88703 Ang F24.CG and E29.CD other bump:2.85528 Ang F24.CD1 and E29.CD other bump:2.60442 Ang F24.CD2 and E29.CD other bump:2.27686 Ang F24.CE2 and E29.CD other bump:2.25191 Ang F24.CZ and E29.CD other bump:2.65341 Ang F24.CD1 and E29.CG other bump:2.26467 Ang F24.CE1 and E29.CG other bump:2.24593 Ang S2.CB and L27.CD2 other bump:2.32056 Ang S2.CA and L27.CD1 other bump:2.39862 Ang S2.CB and L27.CD1 other bump:2.43599 Ang G1.O and L27.CD1 other bump:2.91035 Ang S2.N and L27.CD1 other bump:2.79549 Ang A23.CB and L27.CD1 other bump:3.16044 Ang S2.CA and L27.CG other bump:2.7809 Ang S2.CB and L27.CG other bump:2.89265 Ang F12.CD1 and K15.NZ other bump:2.1962 Ang F12.CE1 and K15.NZ other bump:1.75387 Ang F3.O and P5.CD other bump:2.19876 Ang F3.C and P5.CD neighbor-bump: 2.44741 Ang S4.N and P5.CD neighbor-bump: 2.43474 Ang S4.CA and P5.CD neighbor-bump: 1.78827 Ang S4.C and P5.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKI 1dxeA 85 :KRLLDIGFYNFLIP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues Number of specific fragments= 4 total=105 Number of alignments=32 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1jr2A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEI 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O T0191 97 :DGK 1jr2A 77 :NNK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 4 total=109 Number of alignments=33 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1jr2A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1jr2A/T0191-1jr2A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 46 :ENLKYVIDGAKAL 1jr2A 41 :LSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:1.60722 Ang Y6.O and D9.OD1 other bump:2.46644 Ang Y6.C and D9.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDA 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKT Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=112 Number of alignments=34 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1j97A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 5 :KTKVIGL 1j97A 3 :KKKKLIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 15 :PVEHSFSPIMHNAAFKDK 1j97A 13 :DSTLVNNETIDEIAREAG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.71378 Ang A15.CA and D18.OD2 other bump:2.49746 Ang A15.C and D18.OD2 other bump:1.78255 Ang A15.O and D18.OD2 other bump:2.57819 Ang P9.CB and H12.CD2 other bump:3.01795 Ang P9.CG and H12.CD2 other bump:2.88711 Ang V3.CG2 and P9.CD T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 4 total=116 Number of alignments=35 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1j97A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1j97A/T0191-1j97A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 5 :KTKVIGL 1j97A 3 :KKKKLIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 15 :PVEHSFSPIMHNAAF 1j97A 13 :DSTLVNNETIDEIAR Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:2.57819 Ang P9.CB and H12.CD2 other bump:3.01795 Ang P9.CG and H12.CD2 other bump:2.88711 Ang V3.CG2 and P9.CD T0191 31 :DKGL 1j97A 28 :EAGV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 5 total=121 Number of alignments=36 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1f5sA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAF 1f5sA 3 :KKKKLILFDFDSTLVNNETIDEIAR Fragment has 17 clashes (null) has 17 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.62758 Ang P19.CB and H22.CD2 other bump:2.96198 Ang P19.CG and H22.CD2 other bump:1.99895 Ang I9.CG1 and H15.NE2 other bump:1.52093 Ang I9.CB and H15.NE2 other bump:1.48459 Ang I9.CG2 and H15.NE2 other bump:3.04311 Ang I9.CD1 and H15.NE2 other bump:2.62617 Ang I9.CG1 and H15.CE1 other bump:2.66853 Ang I9.CB and H15.CE1 other bump:2.75107 Ang I9.CG2 and H15.CE1 other bump:3.23375 Ang I9.CG2 and H15.ND1 other bump:2.36751 Ang I9.CB and H15.CD2 other bump:1.26652 Ang I9.CG2 and H15.CD2 other bump:2.58208 Ang G10.O and H15.CD2 other bump:2.6074 Ang I9.CG2 and H15.CG other bump:2.91333 Ang I9.CD1 and E14.OE2 neighbor-bump: 2.69112 Ang P12.C and V13.CB neighbor-bump: 2.52689 Ang I9.CG2 and G10.O T0191 31 :DKGL 1f5sA 28 :EAGV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 4 total=125 Number of alignments=37 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1f5sA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1f5sA/T0191-1f5sA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDK 1f5sA 3 :KKKKLILFDFDSTLVNNETIDEIAREAG Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:2.77157 Ang A25.CA and D28.OD2 other bump:2.58981 Ang A25.C and D28.OD2 other bump:1.88891 Ang A25.O and D28.OD2 other bump:2.62758 Ang P19.CB and H22.CD2 other bump:2.96198 Ang P19.CG and H22.CD2 other bump:1.52093 Ang I9.CB and H15.NE2 other bump:1.99895 Ang I9.CG1 and H15.NE2 other bump:1.48459 Ang I9.CG2 and H15.NE2 other bump:3.04311 Ang I9.CD1 and H15.NE2 other bump:2.66853 Ang I9.CB and H15.CE1 other bump:2.62617 Ang I9.CG1 and H15.CE1 other bump:2.75107 Ang I9.CG2 and H15.CE1 other bump:3.23375 Ang I9.CG2 and H15.ND1 other bump:2.36751 Ang I9.CB and H15.CD2 other bump:1.26652 Ang I9.CG2 and H15.CD2 other bump:2.58208 Ang G10.O and H15.CD2 other bump:2.6074 Ang I9.CG2 and H15.CG other bump:2.91333 Ang I9.CD1 and E14.OE2 neighbor-bump: 2.69112 Ang P12.C and V13.CB neighbor-bump: 2.52689 Ang I9.CG2 and G10.O T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 3 total=128 Number of alignments=38 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1a99A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 5 :KTKVIGLI 1a99A 30 :KTLHIYNW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYL 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQL Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 3 total=131 Number of alignments=39 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1a99A read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1a99A/T0191-1a99A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 5 :KTKVIGL 1a99A 30 :KTLHIYN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 16 :VEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 37 :WSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 63 clashes (null) has 63 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:3.09447 Ang F15.CZ and Y22.C other bump:2.89904 Ang F15.CD2 and Y22.CE2 other bump:2.93264 Ang F15.CG and Y22.CD2 other bump:2.29811 Ang F15.CD2 and Y22.CD2 other bump:1.91288 Ang F15.CE2 and Y22.CD2 other bump:2.30571 Ang F15.CZ and Y22.CD2 other bump:2.22132 Ang H11.CE1 and Y22.CG other bump:2.48312 Ang F15.CE2 and Y22.CG other bump:2.90643 Ang H11.ND1 and Y22.CB other bump:1.61187 Ang H11.CE1 and Y22.CB other bump:1.97413 Ang H11.NE2 and Y22.CB other bump:2.81027 Ang F15.CE1 and Y22.CB other bump:2.60979 Ang F15.CE2 and Y22.CB other bump:1.84125 Ang F15.CZ and Y22.CB other bump:2.89534 Ang H11.NE2 and Y22.CA other bump:2.6286 Ang F15.CE2 and Y22.CA other bump:2.21613 Ang F15.CZ and Y22.CA other bump:1.79891 Ang F15.CE2 and Y22.N other bump:2.0426 Ang F15.CZ and Y22.N other bump:2.49519 Ang F15.CE2 and N21.C other bump:3.236 Ang F15.CZ and N21.C other bump:2.90131 Ang F15.CE2 and N21.CA other bump:3.0095 Ang F15.CD2 and L20.C other bump:3.28467 Ang F15.CE2 and L20.C other bump:1.90272 Ang F15.CD2 and L20.O other bump:2.51584 Ang F15.CE2 and L20.O other bump:2.27138 Ang A13.O and D17.OD2 other bump:2.90917 Ang H11.CD2 and F15.CZ other bump:2.40639 Ang H11.CE1 and F15.CZ other bump:1.99186 Ang H11.NE2 and F15.CZ other bump:2.82281 Ang H11.CG and F15.CE1 other bump:2.0954 Ang H11.CD2 and F15.CE1 other bump:3.02144 Ang H11.ND1 and F15.CE1 other bump:2.52401 Ang H11.CE1 and F15.CE1 other bump:1.87048 Ang H11.NE2 and F15.CE1 other bump:2.77613 Ang F6.CE2 and H11.N other bump:3.23445 Ang F6.CZ and H11.N other bump:3.0576 Ang F6.CE2 and M10.C other bump:2.99218 Ang F6.CZ and M10.C other bump:2.74202 Ang S7.N and M10.CE other bump:1.93071 Ang F6.CG and M10.CE other bump:2.74293 Ang F6.CD2 and M10.CE other bump:2.51372 Ang F6.CZ and M10.CE other bump:1.08514 Ang F6.CD1 and M10.CE other bump:1.58421 Ang F6.CE1 and M10.CE other bump:2.74828 Ang F6.CG and M10.SD other bump:3.19275 Ang F6.CD2 and M10.SD other bump:2.8116 Ang F6.CE2 and M10.SD other bump:1.70162 Ang F6.CZ and M10.SD other bump:1.56886 Ang F6.CD1 and M10.SD other bump:0.43463 Ang F6.CE1 and M10.SD other bump:2.68878 Ang F6.CE2 and M10.CG other bump:1.40489 Ang F6.CZ and M10.CG other bump:1.73586 Ang F6.CE1 and M10.CG other bump:2.97084 Ang F6.CD2 and M10.CB other bump:1.91184 Ang F6.CE2 and M10.CB other bump:1.43951 Ang F6.CZ and M10.CB other bump:2.37401 Ang F6.CE1 and M10.CB other bump:2.86443 Ang F6.CE2 and M10.CA other bump:2.70625 Ang F6.CZ and M10.CA other bump:2.11573 Ang V2.O and S5.OG other bump:2.83282 Ang V2.CG2 and S5.OG other bump:2.78447 Ang V2.CG2 and S5.CB T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYLDE 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQLTA Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 33 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG T0191 88 :G 1a99A 96 :G Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues Number of specific fragments= 4 total=135 Number of alignments=40 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-vit-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=138 Number of alignments=41 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-vit-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=141 Number of alignments=42 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-local-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=144 Number of alignments=43 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-local-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/1gpjA-T0191-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=147 Number of alignments=44 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 150 :IGSAAVELAERELGSLHDKTVLVV Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.35308 Ang F23.CE2 and V25.CG2 other bump:3.12277 Ang F23.CZ and V25.CG2 other bump:2.19933 Ang K14.O and Y20.OH other bump:1.94499 Ang L16.O and Y20.CE2 other bump:3.00467 Ang L16.C and Y20.CE2 other bump:2.88385 Ang N17.CA and Y20.CD2 other bump:2.56018 Ang L16.O and Y20.CD2 neighbor-bump: 2.86424 Ang Y18.CD1 and V19.CG2 neighbor-bump: 2.47688 Ang Y18.CE1 and V19.CG2 neighbor-bump: 3.0126 Ang Y18.CE2 and V19.CG2 neighbor-bump: 2.58874 Ang Y18.CZ and V19.CG2 other bump:2.9293 Ang F11.CE2 and N17.ND2 other bump:3.0555 Ang F11.CZ and N17.ND2 other bump:1.97073 Ang H7.NE2 and F11.CZ other bump:3.06862 Ang H7.ND1 and F11.CZ other bump:1.85665 Ang H7.CE1 and F11.CZ other bump:2.62215 Ang H7.CG and F11.CE1 other bump:1.9859 Ang H7.CD2 and F11.CE1 other bump:1.1138 Ang H7.NE2 and F11.CE1 other bump:2.42268 Ang H7.ND1 and F11.CE1 other bump:1.58378 Ang H7.CE1 and F11.CE1 other bump:2.53258 Ang H7.CD2 and F11.CD1 other bump:2.30792 Ang H7.NE2 and F11.CD1 other bump:2.85025 Ang H7.CE1 and F11.CD1 T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1gpjA 175 :AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.74691 Ang K14.NZ and I38.C other bump:2.7452 Ang K14.CD and I38.O other bump:2.33628 Ang K14.CE and I38.O other bump:2.67751 Ang Y34.CD2 and I38.CD1 other bump:2.43149 Ang Y34.CE2 and I38.CD1 other bump:2.61107 Ang Y34.CZ and I38.CD1 other bump:2.154 Ang V23.CB and L35.CD2 other bump:1.72432 Ang V23.CG2 and L35.CD2 other bump:3.09957 Ang V23.CA and L35.CD2 other bump:2.70575 Ang V23.CB and L35.CG other bump:2.87445 Ang V23.CG2 and L35.CG other bump:2.75651 Ang K7.CA and Y34.OH other bump:2.7189 Ang I10.CB and Y34.OH other bump:2.71142 Ang I10.CG1 and Y34.OH other bump:1.97608 Ang I10.CD1 and Y34.OH other bump:2.71718 Ang I10.CD1 and Y34.CZ other bump:2.69752 Ang K7.CG and Y34.CE1 other bump:1.99596 Ang I25.N and I31.CD1 other bump:2.78421 Ang I25.CA and I31.CD1 other bump:2.8927 Ang I25.CB and I31.CD1 other bump:2.67458 Ang I25.O and I31.CD1 other bump:2.44006 Ang V23.O and I31.CG2 other bump:2.39876 Ang I25.CG1 and I31.CG1 other bump:2.7833 Ang I25.CD1 and I31.CG1 other bump:2.96834 Ang T24.C and I31.CG1 other bump:2.46806 Ang I25.N and I31.CG1 other bump:2.97008 Ang I25.CA and I31.CG1 other bump:2.35787 Ang I25.CB and I31.CG1 other bump:2.53707 Ang I25.CD1 and I31.CA other bump:2.29794 Ang I25.CD1 and I31.N other bump:2.51978 Ang I25.CD1 and E30.C other bump:2.30734 Ang L2.CD1 and E30.CB other bump:1.4282 Ang I18.CD1 and F21.CZ other bump:2.81358 Ang I18.CG1 and F21.CZ other bump:2.29029 Ang I18.CD1 and F21.CE2 other bump:3.11319 Ang I18.CB and F21.CE2 other bump:3.16502 Ang I18.CG1 and F21.CE2 other bump:2.43785 Ang I18.CD1 and F21.CE1 other bump:2.30867 Ang P3.CG and L6.CD1 other bump:2.84908 Ang P3.CD and L6.CD1 other bump:2.90703 Ang P3.CG and L6.CG neighbor-bump: 2.64239 Ang L2.N and P3.CD Number of specific fragments= 2 total=149 Number of alignments=45 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 19 :SFSPIMHNAAFKDKGLNYVYVAFDVLPENL 1gpjA 149 :SIGSAAVELAERELGSLHDKTVLVVGAGEM Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues neighbor-bump: 2.47527 Ang L27.CA and P28.CD neighbor-bump: 2.31688 Ang V26.O and L27.CG neighbor-bump: 2.02932 Ang V26.O and L27.CB neighbor-bump: 2.522 Ang V26.C and L27.CB other bump:2.35308 Ang F24.CE2 and V26.CG2 other bump:3.12277 Ang F24.CZ and V26.CG2 other bump:2.19933 Ang K15.O and Y21.OH other bump:1.94499 Ang L17.O and Y21.CE2 other bump:3.00467 Ang L17.C and Y21.CE2 other bump:2.88385 Ang N18.CA and Y21.CD2 other bump:2.56018 Ang L17.O and Y21.CD2 neighbor-bump: 2.86424 Ang Y19.CD1 and V20.CG2 neighbor-bump: 2.47688 Ang Y19.CE1 and V20.CG2 neighbor-bump: 3.0126 Ang Y19.CE2 and V20.CG2 neighbor-bump: 2.58874 Ang Y19.CZ and V20.CG2 other bump:2.9293 Ang F12.CE2 and N18.ND2 other bump:3.0555 Ang F12.CZ and N18.ND2 other bump:3.06862 Ang H8.ND1 and F12.CZ other bump:1.85665 Ang H8.CE1 and F12.CZ other bump:1.97073 Ang H8.NE2 and F12.CZ other bump:2.62215 Ang H8.CG and F12.CE1 other bump:1.9859 Ang H8.CD2 and F12.CE1 other bump:2.42268 Ang H8.ND1 and F12.CE1 other bump:1.58378 Ang H8.CE1 and F12.CE1 other bump:1.1138 Ang H8.NE2 and F12.CE1 other bump:2.53258 Ang H8.CD2 and F12.CD1 other bump:2.85025 Ang H8.CE1 and F12.CD1 other bump:2.30792 Ang H8.NE2 and F12.CD1 other bump:2.08129 Ang S2.OG and P5.CD other bump:2.19547 Ang S2.OG and P5.CG T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1gpjA 180 :KTVAKSLVDRGVRAVLVANRTYERAVELARDLG Fragment has 37 clashes (null) has 37 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 35 residues other bump:2.74691 Ang K9.NZ and I33.C other bump:2.7452 Ang K9.CD and I33.O other bump:2.33628 Ang K9.CE and I33.O other bump:2.67751 Ang Y29.CD2 and I33.CD1 other bump:2.43149 Ang Y29.CE2 and I33.CD1 other bump:2.61107 Ang Y29.CZ and I33.CD1 other bump:2.154 Ang V18.CB and L30.CD2 other bump:1.72432 Ang V18.CG2 and L30.CD2 other bump:3.09957 Ang V18.CA and L30.CD2 other bump:2.70575 Ang V18.CB and L30.CG other bump:2.87445 Ang V18.CG2 and L30.CG other bump:2.75651 Ang K2.CA and Y29.OH other bump:2.7189 Ang I5.CB and Y29.OH other bump:2.71142 Ang I5.CG1 and Y29.OH other bump:1.97608 Ang I5.CD1 and Y29.OH other bump:2.71718 Ang I5.CD1 and Y29.CZ other bump:2.69752 Ang K2.CG and Y29.CE1 other bump:1.99596 Ang I20.N and I26.CD1 other bump:2.78421 Ang I20.CA and I26.CD1 other bump:2.8927 Ang I20.CB and I26.CD1 other bump:2.67458 Ang I20.O and I26.CD1 other bump:2.44006 Ang V18.O and I26.CG2 other bump:2.39876 Ang I20.CG1 and I26.CG1 other bump:2.7833 Ang I20.CD1 and I26.CG1 other bump:2.96834 Ang T19.C and I26.CG1 other bump:2.46806 Ang I20.N and I26.CG1 other bump:2.97008 Ang I20.CA and I26.CG1 other bump:2.35787 Ang I20.CB and I26.CG1 other bump:2.53707 Ang I20.CD1 and I26.CA other bump:2.29794 Ang I20.CD1 and I26.N other bump:2.51978 Ang I20.CD1 and E25.C other bump:1.4282 Ang I13.CD1 and F16.CZ other bump:2.81358 Ang I13.CG1 and F16.CZ other bump:2.29029 Ang I13.CD1 and F16.CE2 other bump:3.11319 Ang I13.CB and F16.CE2 other bump:3.16502 Ang I13.CG1 and F16.CE2 other bump:2.43785 Ang I13.CD1 and F16.CE1 Number of specific fragments= 2 total=151 Number of alignments=46 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 71 :IEIMKYLDEIDKDAQLIGAVN 1gpjA 100 :QEILRQVKKAYDRAARLGTLD Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.82381 Ang E3.CD and Y7.OH other bump:2.18656 Ang E3.CG and Y7.CE1 other bump:2.67429 Ang E3.CD and Y7.CE1 other bump:2.66578 Ang E3.O and Y7.CD1 Number of specific fragments= 1 total=152 Number of alignments=47 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPV 1gpjA 165 :LHDKTVLVVGAGE Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues neighbor-bump: 2.6424 Ang H12.N and P13.CD neighbor-bump: 2.4811 Ang I10.CG2 and G11.N self-bump: 1.33845 Ang I10.CA and I10.CB T0191 21 :SPIMHNAAFKDKGLNYVYVAFDV 1gpjA 178 :MGKTVAKSLVDRGVRAVLVANRT Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.61414 Ang V20.CG1 and F22.CE1 neighbor-bump: 2.64484 Ang N16.OD1 and Y17.CD1 neighbor-bump: 2.18565 Ang N16.OD1 and Y17.N other bump:2.95727 Ang H6.CE1 and F10.CZ other bump:2.59773 Ang H6.NE2 and F10.CZ other bump:2.77283 Ang H6.CE1 and F10.CE1 other bump:2.58089 Ang H6.CD2 and F10.CE1 other bump:2.14232 Ang H6.NE2 and F10.CE1 neighbor-bump: 2.67595 Ang S2.N and P3.CD T0191 48 :LKYVIDGAKAL 1gpjA 201 :YERAVELARDL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues Number of specific fragments= 3 total=155 Number of alignments=48 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-simpleSW-adpstyle5.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-simpleSW-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set Number of specific fragments= 0 total=155 # Reading fragments from alignment file # T0191 read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-simpleSW-adpstyle1.pw.a2m.gz # 1gpjA read from /projects/compbio/experiments/casp5/t0191/t0191-1-110/1gpjA/T0191-1gpjA-simpleSW-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 65 :LGDLIHDDAWVKRGSEAVRHLFRV Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.14655 Ang G1.O and P4.CD other bump:2.39089 Ang G1.C and P4.CD self-bump: 1.37034 Ang P4.N and P4.CD other bump:2.82286 Ang F2.C and P4.CD neighbor-bump: 2.36371 Ang S3.N and P4.CD other bump:2.47181 Ang G1.O and P4.CG other bump:2.83373 Ang G1.C and P4.CG Number of specific fragments= 1 total=156 Number of alignments=49 # command:# Reading fragments from alignment file # T0191 read from T0191.t2k-2track-undertaker.a2m # command:# Prefix for input files set to 1gpjA/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1gpjA-T0191-local-adpstyle1.pw.a2m.gz # 1gpjA read from 1gpjA-T0191-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=159 Number of alignments=50 # Reading fragments from alignment file # T0191 read from 1gpjA-T0191-local-adpstyle5.pw.a2m.gz # 1gpjA read from 1gpjA-T0191-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=162 Number of alignments=51 # Reading fragments from alignment file # T0191 read from 1gpjA-T0191-vit-adpstyle1.pw.a2m.gz # 1gpjA read from 1gpjA-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=165 Number of alignments=52 # Reading fragments from alignment file # T0191 read from 1gpjA-T0191-vit-adpstyle5.pw.a2m.gz # 1gpjA read from 1gpjA-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLP 1gpjA 50 :RVEVYASGARDRAEELGDLIHDDAWVKRGSEAVRHLFRVAS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:1.97932 Ang F38.O and P42.CD other bump:2.96399 Ang F38.C and P42.CD neighbor-bump: 2.32406 Ang L41.CA and P42.CD neighbor-bump: 2.70287 Ang L41.CB and P42.CD neighbor-bump: 2.30584 Ang L41.N and P42.CD neighbor-bump: 2.02049 Ang L41.C and P42.CD self-bump: 1.3277 Ang P42.N and P42.CD other bump:1.47925 Ang F38.O and P42.CG other bump:2.69205 Ang F38.C and P42.CG self-bump: 2.18047 Ang P42.N and P42.CG other bump:2.6175 Ang F38.O and P42.CB other bump:2.66312 Ang K4.NZ and V40.CG2 other bump:2.99398 Ang K2.NZ and V40.CG2 other bump:2.13002 Ang K2.NZ and V40.CG1 other bump:2.07048 Ang I6.CA and Y33.OH other bump:2.2859 Ang I6.CG2 and Y33.OH other bump:1.70307 Ang I6.CB and Y33.OH other bump:1.33123 Ang I6.CG1 and Y33.OH other bump:2.64458 Ang I6.CD1 and Y33.OH other bump:3.14265 Ang I6.CA and Y33.CZ other bump:2.99159 Ang I6.CG2 and Y33.CZ other bump:2.9713 Ang I6.CB and Y33.CZ other bump:2.52357 Ang I6.CG1 and Y33.CZ other bump:2.95813 Ang I6.CG2 and Y33.CE2 other bump:2.78861 Ang H15.CB and K27.NZ other bump:2.65097 Ang H15.CD2 and K27.NZ other bump:2.63312 Ang E14.CA and K27.NZ other bump:2.49587 Ang E14.CB and K27.NZ other bump:2.00059 Ang E14.C and K27.NZ other bump:1.31575 Ang H15.N and K27.NZ other bump:2.2536 Ang H15.CA and K27.NZ other bump:2.75624 Ang E14.CA and K27.CE other bump:2.29099 Ang E14.CB and K27.CE other bump:2.12912 Ang E14.C and K27.CE other bump:2.25515 Ang H15.N and K27.CE other bump:1.77241 Ang E14.CG and K27.CE other bump:1.92762 Ang E14.OE1 and K27.CD other bump:2.76702 Ang E14.CB and K27.CD other bump:1.88622 Ang E14.CG and K27.CD other bump:1.97704 Ang E14.CD and K27.CD other bump:2.21732 Ang E14.OE1 and K27.CG other bump:2.3187 Ang E14.OE2 and K27.CG other bump:2.21398 Ang E14.CG and K27.CG other bump:1.83873 Ang E14.CD and K27.CG other bump:2.09737 Ang H15.O and P19.CD other bump:3.06597 Ang H15.C and P19.CD other bump:3.04821 Ang S16.CA and P19.CD other bump:2.14655 Ang S16.O and P19.CD other bump:2.39089 Ang S16.C and P19.CD self-bump: 1.37034 Ang P19.N and P19.CD other bump:2.82286 Ang F17.C and P19.CD neighbor-bump: 2.36371 Ang S18.N and P19.CD other bump:2.43518 Ang H15.O and P19.CG other bump:2.89889 Ang S16.CA and P19.CG other bump:2.47181 Ang S16.O and P19.CG other bump:2.83373 Ang S16.C and P19.CG other bump:2.941 Ang V13.CG1 and S16.OG neighbor-bump: 2.12156 Ang H11.C and P12.CD self-bump: 1.38155 Ang P12.N and P12.CD other bump:2.97762 Ang I9.CA and H11.CD2 neighbor-bump: 2.30253 Ang L8.O and I9.CB neighbor-bump: 2.4987 Ang L8.C and I9.CB other bump:2.5187 Ang K2.CD and K4.CE other bump:2.71992 Ang K2.CD and K4.CD T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKI 1gpjA 104 :RQVKKAYDRAARLGTLDEALKIVFRR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.8345 Ang I8.CG1 and H25.ND1 other bump:3.33335 Ang I8.CD1 and H25.ND1 other bump:3.10076 Ang I8.CD1 and H25.CB other bump:1.64241 Ang N20.O and P24.CD other bump:2.83913 Ang N20.C and P24.CD other bump:2.39142 Ang N20.O and P24.CG other bump:2.77305 Ang F19.CE2 and I23.CD1 other bump:2.80379 Ang I8.CG2 and K12.NZ T0191 87 :IGAVNTIKIEDGKAIGYNTDGIGA 1gpjA 130 :AINLGKRAREETRISEGAVSIGSA Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.6769 Ang N19.ND2 and A25.C other bump:2.21898 Ang N19.ND2 and A25.CB other bump:2.5988 Ang N19.CG and A25.CA other bump:1.28652 Ang N19.ND2 and A25.CA other bump:2.0724 Ang N19.CG and A25.N other bump:1.0823 Ang N19.ND2 and A25.N other bump:2.3736 Ang N19.CG and G24.C other bump:1.85883 Ang N19.ND2 and G24.C other bump:2.83609 Ang N19.OD1 and G24.C other bump:3.118 Ang N19.CG and G24.CA neighbor-bump: 2.60621 Ang G17.O and Y18.CD1 other bump:1.63725 Ang I10.CG2 and I16.CD1 other bump:2.97524 Ang I10.CB and I16.CD1 other bump:2.95428 Ang I10.CG2 and I16.CG1 other bump:2.68852 Ang I8.CG2 and D12.OD2 other bump:2.80196 Ang V5.CG1 and K9.NZ Number of specific fragments= 3 total=168 Number of alignments=53 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALGIV 1gpjA 78 :GSEAVRHLFRVASGLESM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 67 :IPHKIEIMKYLDEIDKDAQLIGAVN 1gpjA 96 :MVGEQEILRQVKKAYDRAARLGTLD Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.82381 Ang E7.CD and Y11.OH other bump:2.18656 Ang E7.CG and Y11.CE1 other bump:2.67429 Ang E7.CD and Y11.CE1 other bump:2.66578 Ang E7.O and Y11.CD1 other bump:2.60287 Ang I2.CG1 and K5.NZ other bump:2.71055 Ang I2.CA and K5.CE other bump:1.75337 Ang I2.CB and K5.CE other bump:1.95531 Ang I2.CG1 and K5.CE other bump:2.77381 Ang I2.CB and K5.CD other bump:2.38158 Ang I2.O and K5.CG other bump:3.23658 Ang I2.C and K5.CG other bump:2.87545 Ang I2.CB and K5.CG Number of specific fragments= 4 total=172 Number of alignments=54 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 45 :PENLKYVIDGAKALGI 1gpjA 79 :SEAVRHLFRVASGLES Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues neighbor-bump: 2.20847 Ang K13.O and A14.CB neighbor-bump: 2.48089 Ang K13.C and A14.CB other bump:2.5935 Ang I9.O and K13.CD T0191 66 :TIPHKIEIMKYLDEIDKDAQLIGAVN 1gpjA 95 :MMVGEQEILRQVKKAYDRAARLGTLD Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.82381 Ang E8.CD and Y12.OH other bump:2.18656 Ang E8.CG and Y12.CE1 other bump:2.67429 Ang E8.CD and Y12.CE1 other bump:2.66578 Ang E8.O and Y12.CD1 other bump:2.71055 Ang I3.CA and K6.CE other bump:2.01083 Ang I3.CB and K6.CE other bump:2.53458 Ang I3.CG1 and K6.CE other bump:2.86267 Ang I3.CD1 and K6.CE other bump:3.07226 Ang I3.CB and K6.CD other bump:2.38158 Ang I3.O and K6.CG other bump:3.23658 Ang I3.C and K6.CG other bump:3.13902 Ang I3.CB and K6.CG Number of specific fragments= 4 total=176 Number of alignments=55 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 71 :IEIMKYLDEIDKDAQLIGAVN 1gpjA 100 :QEILRQVKKAYDRAARLGTLD Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.82381 Ang E3.CD and Y7.OH other bump:2.18656 Ang E3.CG and Y7.CE1 other bump:2.67429 Ang E3.CD and Y7.CE1 other bump:2.66578 Ang E3.O and Y7.CD1 Number of specific fragments= 1 total=177 Number of alignments=56 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPV 1gpjA 165 :LHDKTVLVVGAGE Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues neighbor-bump: 2.6424 Ang H12.N and P13.CD neighbor-bump: 2.4811 Ang I10.CG2 and G11.N self-bump: 1.33845 Ang I10.CA and I10.CB T0191 21 :SPIMHNAAFKDKGLNYVYVAFDV 1gpjA 178 :MGKTVAKSLVDRGVRAVLVANRT Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.61414 Ang V20.CG1 and F22.CE1 neighbor-bump: 2.64484 Ang N16.OD1 and Y17.CD1 neighbor-bump: 2.18565 Ang N16.OD1 and Y17.N other bump:2.95727 Ang H6.CE1 and F10.CZ other bump:2.59773 Ang H6.NE2 and F10.CZ other bump:2.77283 Ang H6.CE1 and F10.CE1 other bump:2.58089 Ang H6.CD2 and F10.CE1 other bump:2.14232 Ang H6.NE2 and F10.CE1 neighbor-bump: 2.67595 Ang S2.N and P3.CD T0191 48 :LKYVIDGAKAL 1gpjA 201 :YERAVELARDL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues Number of specific fragments= 3 total=180 Number of alignments=57 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALGIV 1gpjA 78 :GSEAVRHLFRVASGLESM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 67 :IPHKIEIMKYLDEIDKDAQLIGAVN 1gpjA 96 :MVGEQEILRQVKKAYDRAARLGTLD Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.82381 Ang E7.CD and Y11.OH other bump:2.18656 Ang E7.CG and Y11.CE1 other bump:2.67429 Ang E7.CD and Y11.CE1 other bump:2.66578 Ang E7.O and Y11.CD1 other bump:2.60287 Ang I2.CG1 and K5.NZ other bump:2.71055 Ang I2.CA and K5.CE other bump:1.75337 Ang I2.CB and K5.CE other bump:1.95531 Ang I2.CG1 and K5.CE other bump:2.77381 Ang I2.CB and K5.CD other bump:2.38158 Ang I2.O and K5.CG other bump:3.23658 Ang I2.C and K5.CG other bump:2.87545 Ang I2.CB and K5.CG Number of specific fragments= 4 total=184 Number of alignments=58 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALG 1gpjA 78 :GSEAVRHLFRVASGLE Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 66 :TIPHKIEIMKYLDEIDKDAQLIGAVN 1gpjA 95 :MMVGEQEILRQVKKAYDRAARLGTLD Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.82381 Ang E8.CD and Y12.OH other bump:2.18656 Ang E8.CG and Y12.CE1 other bump:2.67429 Ang E8.CD and Y12.CE1 other bump:2.66578 Ang E8.O and Y12.CD1 other bump:2.71055 Ang I3.CA and K6.CE other bump:2.01083 Ang I3.CB and K6.CE other bump:2.53458 Ang I3.CG1 and K6.CE other bump:2.86267 Ang I3.CD1 and K6.CE other bump:3.07226 Ang I3.CB and K6.CD other bump:2.38158 Ang I3.O and K6.CG other bump:3.23658 Ang I3.C and K6.CG other bump:3.13902 Ang I3.CB and K6.CG Number of specific fragments= 4 total=188 Number of alignments=59 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 19 :SFSPIMHNAAFKDKGLNYVYVAFDVLPENL 1gpjA 149 :SIGSAAVELAERELGSLHDKTVLVVGAGEM Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues neighbor-bump: 2.47527 Ang L27.CA and P28.CD neighbor-bump: 2.31688 Ang V26.O and L27.CG neighbor-bump: 2.02932 Ang V26.O and L27.CB neighbor-bump: 2.522 Ang V26.C and L27.CB other bump:2.35308 Ang F24.CE2 and V26.CG2 other bump:3.12277 Ang F24.CZ and V26.CG2 other bump:2.19933 Ang K15.O and Y21.OH other bump:1.94499 Ang L17.O and Y21.CE2 other bump:3.00467 Ang L17.C and Y21.CE2 other bump:2.88385 Ang N18.CA and Y21.CD2 other bump:2.56018 Ang L17.O and Y21.CD2 neighbor-bump: 2.86424 Ang Y19.CD1 and V20.CG2 neighbor-bump: 2.47688 Ang Y19.CE1 and V20.CG2 neighbor-bump: 3.0126 Ang Y19.CE2 and V20.CG2 neighbor-bump: 2.58874 Ang Y19.CZ and V20.CG2 other bump:2.9293 Ang F12.CE2 and N18.ND2 other bump:3.0555 Ang F12.CZ and N18.ND2 other bump:3.06862 Ang H8.ND1 and F12.CZ other bump:1.85665 Ang H8.CE1 and F12.CZ other bump:1.97073 Ang H8.NE2 and F12.CZ other bump:2.62215 Ang H8.CG and F12.CE1 other bump:1.9859 Ang H8.CD2 and F12.CE1 other bump:2.42268 Ang H8.ND1 and F12.CE1 other bump:1.58378 Ang H8.CE1 and F12.CE1 other bump:1.1138 Ang H8.NE2 and F12.CE1 other bump:2.53258 Ang H8.CD2 and F12.CD1 other bump:2.85025 Ang H8.CE1 and F12.CD1 other bump:2.30792 Ang H8.NE2 and F12.CD1 other bump:2.08129 Ang S2.OG and P5.CD other bump:2.19547 Ang S2.OG and P5.CG T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1gpjA 180 :KTVAKSLVDRGVRAVLVANRTYERAVELARDLG Fragment has 37 clashes (null) has 37 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 35 residues other bump:2.74691 Ang K9.NZ and I33.C other bump:2.7452 Ang K9.CD and I33.O other bump:2.33628 Ang K9.CE and I33.O other bump:2.67751 Ang Y29.CD2 and I33.CD1 other bump:2.43149 Ang Y29.CE2 and I33.CD1 other bump:2.61107 Ang Y29.CZ and I33.CD1 other bump:2.154 Ang V18.CB and L30.CD2 other bump:1.72432 Ang V18.CG2 and L30.CD2 other bump:3.09957 Ang V18.CA and L30.CD2 other bump:2.70575 Ang V18.CB and L30.CG other bump:2.87445 Ang V18.CG2 and L30.CG other bump:2.75651 Ang K2.CA and Y29.OH other bump:2.7189 Ang I5.CB and Y29.OH other bump:2.71142 Ang I5.CG1 and Y29.OH other bump:1.97608 Ang I5.CD1 and Y29.OH other bump:2.71718 Ang I5.CD1 and Y29.CZ other bump:2.69752 Ang K2.CG and Y29.CE1 other bump:1.99596 Ang I20.N and I26.CD1 other bump:2.78421 Ang I20.CA and I26.CD1 other bump:2.8927 Ang I20.CB and I26.CD1 other bump:2.67458 Ang I20.O and I26.CD1 other bump:2.44006 Ang V18.O and I26.CG2 other bump:2.39876 Ang I20.CG1 and I26.CG1 other bump:2.7833 Ang I20.CD1 and I26.CG1 other bump:2.96834 Ang T19.C and I26.CG1 other bump:2.46806 Ang I20.N and I26.CG1 other bump:2.97008 Ang I20.CA and I26.CG1 other bump:2.35787 Ang I20.CB and I26.CG1 other bump:2.53707 Ang I20.CD1 and I26.CA other bump:2.29794 Ang I20.CD1 and I26.N other bump:2.51978 Ang I20.CD1 and E25.C other bump:1.4282 Ang I13.CD1 and F16.CZ other bump:2.81358 Ang I13.CG1 and F16.CZ other bump:2.29029 Ang I13.CD1 and F16.CE2 other bump:3.11319 Ang I13.CB and F16.CE2 other bump:3.16502 Ang I13.CG1 and F16.CE2 other bump:2.43785 Ang I13.CD1 and F16.CE1 Number of specific fragments= 2 total=190 Number of alignments=60 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 150 :IGSAAVELAERELGSLHDKTVLVV Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.35308 Ang F23.CE2 and V25.CG2 other bump:3.12277 Ang F23.CZ and V25.CG2 other bump:2.19933 Ang K14.O and Y20.OH other bump:1.94499 Ang L16.O and Y20.CE2 other bump:3.00467 Ang L16.C and Y20.CE2 other bump:2.88385 Ang N17.CA and Y20.CD2 other bump:2.56018 Ang L16.O and Y20.CD2 neighbor-bump: 2.86424 Ang Y18.CD1 and V19.CG2 neighbor-bump: 2.47688 Ang Y18.CE1 and V19.CG2 neighbor-bump: 3.0126 Ang Y18.CE2 and V19.CG2 neighbor-bump: 2.58874 Ang Y18.CZ and V19.CG2 other bump:2.9293 Ang F11.CE2 and N17.ND2 other bump:3.0555 Ang F11.CZ and N17.ND2 other bump:1.97073 Ang H7.NE2 and F11.CZ other bump:3.06862 Ang H7.ND1 and F11.CZ other bump:1.85665 Ang H7.CE1 and F11.CZ other bump:2.62215 Ang H7.CG and F11.CE1 other bump:1.9859 Ang H7.CD2 and F11.CE1 other bump:1.1138 Ang H7.NE2 and F11.CE1 other bump:2.42268 Ang H7.ND1 and F11.CE1 other bump:1.58378 Ang H7.CE1 and F11.CE1 other bump:2.53258 Ang H7.CD2 and F11.CD1 other bump:2.30792 Ang H7.NE2 and F11.CD1 other bump:2.85025 Ang H7.CE1 and F11.CD1 T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1gpjA 175 :AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.74691 Ang K14.NZ and I38.C other bump:2.7452 Ang K14.CD and I38.O other bump:2.33628 Ang K14.CE and I38.O other bump:2.67751 Ang Y34.CD2 and I38.CD1 other bump:2.43149 Ang Y34.CE2 and I38.CD1 other bump:2.61107 Ang Y34.CZ and I38.CD1 other bump:2.154 Ang V23.CB and L35.CD2 other bump:1.72432 Ang V23.CG2 and L35.CD2 other bump:3.09957 Ang V23.CA and L35.CD2 other bump:2.70575 Ang V23.CB and L35.CG other bump:2.87445 Ang V23.CG2 and L35.CG other bump:2.75651 Ang K7.CA and Y34.OH other bump:2.7189 Ang I10.CB and Y34.OH other bump:2.71142 Ang I10.CG1 and Y34.OH other bump:1.97608 Ang I10.CD1 and Y34.OH other bump:2.71718 Ang I10.CD1 and Y34.CZ other bump:2.69752 Ang K7.CG and Y34.CE1 other bump:1.99596 Ang I25.N and I31.CD1 other bump:2.78421 Ang I25.CA and I31.CD1 other bump:2.8927 Ang I25.CB and I31.CD1 other bump:2.67458 Ang I25.O and I31.CD1 other bump:2.44006 Ang V23.O and I31.CG2 other bump:2.39876 Ang I25.CG1 and I31.CG1 other bump:2.7833 Ang I25.CD1 and I31.CG1 other bump:2.96834 Ang T24.C and I31.CG1 other bump:2.46806 Ang I25.N and I31.CG1 other bump:2.97008 Ang I25.CA and I31.CG1 other bump:2.35787 Ang I25.CB and I31.CG1 other bump:2.53707 Ang I25.CD1 and I31.CA other bump:2.29794 Ang I25.CD1 and I31.N other bump:2.51978 Ang I25.CD1 and E30.C other bump:2.30734 Ang L2.CD1 and E30.CB other bump:1.4282 Ang I18.CD1 and F21.CZ other bump:2.81358 Ang I18.CG1 and F21.CZ other bump:2.29029 Ang I18.CD1 and F21.CE2 other bump:3.11319 Ang I18.CB and F21.CE2 other bump:3.16502 Ang I18.CG1 and F21.CE2 other bump:2.43785 Ang I18.CD1 and F21.CE1 other bump:2.30867 Ang P3.CG and L6.CD1 other bump:2.84908 Ang P3.CD and L6.CD1 other bump:2.90703 Ang P3.CG and L6.CG neighbor-bump: 2.64239 Ang L2.N and P3.CD Number of specific fragments= 2 total=192 Number of alignments=61 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALGIV 1gpjA 78 :GSEAVRHLFRVASGLESM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 67 :IPHKIEIMKYLDEIDKDAQLIGAV 1gpjA 96 :MVGEQEILRQVKKAYDRAARLGTL Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.82381 Ang E7.CD and Y11.OH other bump:2.18656 Ang E7.CG and Y11.CE1 other bump:2.67429 Ang E7.CD and Y11.CE1 other bump:2.66578 Ang E7.O and Y11.CD1 other bump:2.60287 Ang I2.CG1 and K5.NZ other bump:2.71055 Ang I2.CA and K5.CE other bump:1.75337 Ang I2.CB and K5.CE other bump:1.95531 Ang I2.CG1 and K5.CE other bump:2.77381 Ang I2.CB and K5.CD other bump:2.38158 Ang I2.O and K5.CG other bump:3.23658 Ang I2.C and K5.CG other bump:2.87545 Ang I2.CB and K5.CG Number of specific fragments= 4 total=196 Number of alignments=62 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 4 :AKTKVIGLIGHPVE 1gpjA 2 :EDLVSVGITHKEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.9856 Ang L9.CD2 and V14.CG2 other bump:2.63974 Ang L9.CG and V14.CG2 other bump:1.76848 Ang L9.CD1 and V14.CG2 other bump:3.07443 Ang L9.CD1 and V14.CB other bump:2.94215 Ang I10.CG1 and P13.CD other bump:2.41032 Ang I10.CD1 and H12.CD2 other bump:2.98634 Ang I10.CD1 and H12.CB T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 23 :RFESDEAVRDIVESFGLSGSVLLQTS Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.16945 Ang H2.CA and F25.CZ other bump:2.96125 Ang H2.CG and F25.CZ other bump:2.41718 Ang H2.ND1 and F25.CZ other bump:2.86127 Ang H2.CB and F25.CZ other bump:2.06041 Ang H2.ND1 and F25.CE2 other bump:2.81854 Ang H2.CE1 and F25.CE2 other bump:3.01801 Ang H2.CA and F25.CE1 other bump:2.81233 Ang H2.ND1 and F25.CD2 other bump:2.60907 Ang H9.CE1 and Y22.N other bump:2.7095 Ang H9.ND1 and V21.C other bump:1.71752 Ang H9.CE1 and V21.C other bump:2.63477 Ang H9.NE2 and V21.C other bump:1.37854 Ang H9.CE1 and V21.O other bump:2.83712 Ang L18.CD1 and V21.CG2 other bump:2.54018 Ang H9.ND1 and V21.CG1 other bump:2.69905 Ang H9.CE1 and V21.CG1 other bump:2.83778 Ang H9.ND1 and V21.CB other bump:2.31412 Ang H9.CE1 and V21.CB other bump:2.50906 Ang H9.CE1 and V21.CA neighbor-bump: 2.67112 Ang N19.OD1 and Y20.CD1 neighbor-bump: 2.78049 Ang N19.C and Y20.CD1 neighbor-bump: 2.58365 Ang N19.O and Y20.CD1 other bump:2.77823 Ang F13.CE1 and L18.C other bump:2.58644 Ang F13.CZ and L18.O other bump:2.57963 Ang F13.CD1 and L18.O other bump:1.74963 Ang F13.CE1 and L18.O other bump:1.16065 Ang S3.CB and M8.CE other bump:1.02791 Ang S3.OG and M8.CE other bump:2.47875 Ang S3.CA and M8.CE other bump:1.55996 Ang S3.CB and M8.SD other bump:1.09464 Ang S3.OG and M8.SD other bump:2.31205 Ang S3.CA and M8.SD other bump:2.49753 Ang S3.C and M8.SD other bump:2.05424 Ang S3.OG and M8.CG T0191 44 :LPENLKYVIDGAKALGIV 1gpjA 78 :GSEAVRHLFRVASGLESM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 2.20847 Ang K14.O and A15.CB neighbor-bump: 2.48089 Ang K14.C and A15.CB other bump:2.5935 Ang I10.O and K14.CD neighbor-bump: 2.4135 Ang L2.CB and P3.CD self-bump: 1.32213 Ang L2.CA and L2.CB T0191 67 :IPHKIEIMKYLDEIDKDAQLIGAV 1gpjA 96 :MVGEQEILRQVKKAYDRAARLGTL Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.82381 Ang E7.CD and Y11.OH other bump:2.18656 Ang E7.CG and Y11.CE1 other bump:2.67429 Ang E7.CD and Y11.CE1 other bump:2.66578 Ang E7.O and Y11.CD1 other bump:2.60287 Ang I2.CG1 and K5.NZ other bump:2.71055 Ang I2.CA and K5.CE other bump:1.75337 Ang I2.CB and K5.CE other bump:1.95531 Ang I2.CG1 and K5.CE other bump:2.77381 Ang I2.CB and K5.CD other bump:2.38158 Ang I2.O and K5.CG other bump:3.23658 Ang I2.C and K5.CG other bump:2.87545 Ang I2.CB and K5.CG Number of specific fragments= 4 total=200 Number of alignments=63 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 3 :NAKTKVIGLIGHP 1gpjA 164 :SLHDKTVLVVGAG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues neighbor-bump: 2.64239 Ang H13.N and P14.CD neighbor-bump: 2.4811 Ang I11.CG2 and G12.N self-bump: 1.33845 Ang I11.CA and I11.CB T0191 46 :ENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI 1gpjA 177 :EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL Fragment has 37 clashes (null) has 37 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 37 residues other bump:2.74691 Ang K12.NZ and I36.C other bump:2.7452 Ang K12.CD and I36.O other bump:2.33628 Ang K12.CE and I36.O other bump:2.67751 Ang Y32.CD2 and I36.CD1 other bump:2.4315 Ang Y32.CE2 and I36.CD1 other bump:2.61108 Ang Y32.CZ and I36.CD1 other bump:3.09957 Ang V21.CA and L33.CD2 other bump:2.154 Ang V21.CB and L33.CD2 other bump:1.72432 Ang V21.CG2 and L33.CD2 other bump:2.70575 Ang V21.CB and L33.CG other bump:2.87445 Ang V21.CG2 and L33.CG other bump:2.75651 Ang K5.CA and Y32.OH other bump:2.7189 Ang I8.CB and Y32.OH other bump:2.71142 Ang I8.CG1 and Y32.OH other bump:1.97608 Ang I8.CD1 and Y32.OH other bump:2.71718 Ang I8.CD1 and Y32.CZ other bump:2.69752 Ang K5.CG and Y32.CE1 other bump:1.99596 Ang I23.N and I29.CD1 other bump:2.78421 Ang I23.CA and I29.CD1 other bump:2.8927 Ang I23.CB and I29.CD1 other bump:2.67458 Ang I23.O and I29.CD1 other bump:2.44006 Ang V21.O and I29.CG2 other bump:2.39876 Ang I23.CG1 and I29.CG1 other bump:2.7833 Ang I23.CD1 and I29.CG1 other bump:2.96834 Ang T22.C and I29.CG1 other bump:2.46806 Ang I23.N and I29.CG1 other bump:2.97008 Ang I23.CA and I29.CG1 other bump:2.35787 Ang I23.CB and I29.CG1 other bump:2.53707 Ang I23.CD1 and I29.CA other bump:2.29794 Ang I23.CD1 and I29.N other bump:2.51978 Ang I23.CD1 and E28.C other bump:1.4282 Ang I16.CD1 and F19.CZ other bump:2.81358 Ang I16.CG1 and F19.CZ other bump:2.29029 Ang I16.CD1 and F19.CE2 other bump:3.11319 Ang I16.CB and F19.CE2 other bump:3.16502 Ang I16.CG1 and F19.CE2 other bump:2.43785 Ang I16.CD1 and F19.CE1 Number of specific fragments= 2 total=202 Number of alignments=64 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set T0191 3 :NAKTKVIGLIGHP 1gpjA 164 :SLHDKTVLVVGAG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues neighbor-bump: 2.64239 Ang H13.N and P14.CD neighbor-bump: 2.4811 Ang I11.CG2 and G12.N self-bump: 1.33845 Ang I11.CA and I11.CB T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 177 :EMGKTVAKSLVDRGVRAVLVANRT Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.61414 Ang V21.CG1 and F23.CE1 neighbor-bump: 2.64484 Ang N17.OD1 and Y18.CD1 neighbor-bump: 2.18565 Ang N17.OD1 and Y18.N other bump:2.95727 Ang H7.CE1 and F11.CZ other bump:2.59773 Ang H7.NE2 and F11.CZ other bump:2.77283 Ang H7.CE1 and F11.CE1 other bump:2.58089 Ang H7.CD2 and F11.CE1 other bump:2.14232 Ang H7.NE2 and F11.CE1 neighbor-bump: 2.67595 Ang S3.N and P4.CD other bump:2.34977 Ang G1.O and P4.CD other bump:2.75409 Ang G1.C and P4.CD T0191 48 :LKYVIDGAKALGIV 1gpjA 201 :YERAVELARDLGGE Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.64559 Ang A9.CA and I14.CD1 other bump:2.96623 Ang A9.CB and I14.CD1 other bump:3.0781 Ang A9.C and I14.CG1 other bump:2.36875 Ang A9.CA and I14.CG1 other bump:2.60036 Ang A9.CB and I14.CG1 Number of specific fragments= 3 total=205 Number of alignments=65 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-local-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-local-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 71 :IEIMKYLDEIDKDAQLIG 1gpjA 100 :QEILRQVKKAYDRAARLG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.82381 Ang E3.CD and Y7.OH other bump:2.18656 Ang E3.CG and Y7.CE1 other bump:2.67429 Ang E3.CD and Y7.CE1 other bump:2.66578 Ang E3.O and Y7.CD1 Number of specific fragments= 1 total=206 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-local-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-local-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set Number of specific fragments= 0 total=206 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-simpleSW-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-simpleSW-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1gpjA 65 :LGDLIHDDAWVKRGSEAVRHLFRV Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.14655 Ang G1.O and P4.CD other bump:2.39089 Ang G1.C and P4.CD self-bump: 1.37034 Ang P4.N and P4.CD other bump:2.82286 Ang F2.C and P4.CD neighbor-bump: 2.36371 Ang S3.N and P4.CD other bump:2.47181 Ang G1.O and P4.CG other bump:2.83373 Ang G1.C and P4.CG Number of specific fragments= 1 total=207 Number of alignments=66 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-simpleSW-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-simpleSW-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set Number of specific fragments= 0 total=207 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-vit-adpstyle1.pw.a2m.gz # 1gpjA read from T0191-1gpjA-vit-adpstyle1.pw.a2m.gz # found chain 1gpjA in template set T0191 71 :IEIMKYLDEIDKDAQLIG 1gpjA 100 :QEILRQVKKAYDRAARLG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.82381 Ang E3.CD and Y7.OH other bump:2.18656 Ang E3.CG and Y7.CE1 other bump:2.67429 Ang E3.CD and Y7.CE1 other bump:2.66578 Ang E3.O and Y7.CD1 Number of specific fragments= 1 total=208 # Reading fragments from alignment file # T0191 read from T0191-1gpjA-vit-adpstyle5.pw.a2m.gz # 1gpjA read from T0191-1gpjA-vit-adpstyle5.pw.a2m.gz # found chain 1gpjA in template set Number of specific fragments= 0 total=208 # command:# Prefix for input files set to 1dl5A/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1dl5A-T0191-fssp-global-adpstyle1.pw.a2m.gz # 1dl5A read from 1dl5A-T0191-fssp-global-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :MINAKTKVIGLIGHPVEHSFSPIMHNAA 1dl5A 18 :IAKAFLEIPREEFLTKSYPLSYVYEDIV Fragment has 21 clashes (null) has 21 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.7777 Ang S21.C and H25.CE1 other bump:1.84791 Ang S21.O and H25.CE1 other bump:2.91514 Ang S21.C and H25.ND1 other bump:2.81038 Ang P22.CA and H25.ND1 other bump:3.25189 Ang P22.C and H25.ND1 other bump:1.95703 Ang S21.O and H25.ND1 other bump:2.7631 Ang F20.CD2 and I23.CD1 other bump:2.80243 Ang S19.C and P22.CD other bump:2.4015 Ang S19.OG and P22.CD other bump:2.21387 Ang S19.O and P22.CD neighbor-bump: 2.40323 Ang S21.OG and P22.CD neighbor-bump: 2.59675 Ang S21.N and P22.CD other bump:2.41598 Ang S19.OG and P22.CG other bump:2.78951 Ang L11.CD2 and F20.CZ other bump:1.84964 Ang L11.CD2 and F20.CE2 other bump:3.09101 Ang V16.CG1 and H18.NE2 other bump:2.90038 Ang G10.C and H14.CE1 other bump:2.35329 Ang G10.O and H14.CE1 other bump:3.01167 Ang L11.CA and H14.ND1 other bump:3.17444 Ang G10.C and H14.ND1 other bump:2.43261 Ang G10.O and H14.ND1 T0191 29 :FKDKGLN 1dl5A 57 :TSSQPSL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 36 :YVYVAFDVLPENLKYVIDGA 1dl5A 101 :GLVVSVEYSRKICEIAKRNV Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.47286 Ang E12.O and Y16.CD1 other bump:2.70072 Ang D8.OD1 and L14.CD2 other bump:2.20458 Ang D8.CG and L14.CD2 other bump:2.80986 Ang D8.N and L14.CD2 other bump:2.4331 Ang D8.CA and L14.CD2 other bump:1.18338 Ang D8.CB and L14.CD2 other bump:2.90155 Ang D8.C and L14.CD2 other bump:1.61674 Ang D8.O and L14.CD1 other bump:2.69368 Ang D8.C and L14.CD1 other bump:2.54422 Ang D8.CG and L14.CG other bump:2.43207 Ang D8.O and L14.CG other bump:2.29298 Ang D8.CB and L14.CG other bump:2.98816 Ang D8.C and L14.CG other bump:2.71354 Ang Y4.CE1 and A6.CB T0191 57 :ALGIVGFNVTIP 1dl5A 139 :VPEFSPYDVIFV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues neighbor-bump: 2.8264 Ang V6.CG1 and G7.CA other bump:3.15594 Ang L3.CA and V6.CG2 T0191 69 :HKI 1dl5A 155 :DEV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues T0191 73 :IMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYNTDG 1dl5A 158 :PETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKD Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 37 residues other bump:2.23035 Ang I30.CD1 and Y32.OH other bump:2.81198 Ang I30.CG2 and Y32.CZ other bump:2.97294 Ang I30.CB and Y32.CE2 other bump:2.41371 Ang I30.CG2 and Y32.CE2 other bump:2.91565 Ang I30.CG2 and Y32.CD2 other bump:2.58626 Ang I9.CG1 and A13.CB other bump:2.99981 Ang I9.CD1 and A13.CB Number of specific fragments= 6 total=214 Number of alignments=67 # Reading fragments from alignment file # T0191 read from 1dl5A-T0191-fssp-global-adpstyle5.pw.a2m.gz # 1dl5A read from 1dl5A-T0191-fssp-global-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :MINAKTKVIGLIGHPVEHSF 1dl5A 1 :MREKLFWILKKYGVSDHIAK Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:2.63814 Ang H14.ND1 and S19.OG other bump:2.58204 Ang H14.CE1 and S19.N other bump:2.69273 Ang H14.ND1 and S19.N other bump:2.5596 Ang H14.CE1 and H18.C other bump:1.91018 Ang H14.CE1 and H18.CB other bump:3.03064 Ang H14.ND1 and H18.CB other bump:2.53125 Ang H14.NE2 and H18.CB other bump:2.68218 Ang H14.CE1 and H18.CA other bump:3.12097 Ang I9.CG2 and H14.CG neighbor-bump: 2.79354 Ang M1.SD and I2.CB neighbor-bump: 2.94708 Ang M1.CG and I2.CA neighbor-bump: 2.8857 Ang M1.SD and I2.CA neighbor-bump: 2.41963 Ang M1.CB and I2.N neighbor-bump: 1.71405 Ang M1.CG and I2.N neighbor-bump: 2.1334 Ang M1.SD and I2.N self-bump: 2.18558 Ang M1.CB and M1.C self-bump: 2.37011 Ang M1.CG and M1.C self-bump: 1.24482 Ang M1.CA and M1.CB T0191 27 :AAFKDKGLN 1dl5A 55 :YSTSSQPSL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 36 :YVYVAFDVLPENLKYVIDGAKALGIV 1dl5A 101 :GLVVSVEYSRKICEIAKRNVERLGIE Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.47286 Ang E12.O and Y16.CD1 other bump:2.70072 Ang D8.OD1 and L14.CD2 other bump:2.20458 Ang D8.CG and L14.CD2 other bump:2.80986 Ang D8.N and L14.CD2 other bump:2.4331 Ang D8.CA and L14.CD2 other bump:1.18338 Ang D8.CB and L14.CD2 other bump:2.90155 Ang D8.C and L14.CD2 other bump:1.61674 Ang D8.O and L14.CD1 other bump:2.69368 Ang D8.C and L14.CD1 other bump:2.54422 Ang D8.CG and L14.CG other bump:2.43207 Ang D8.O and L14.CG other bump:2.29298 Ang D8.CB and L14.CG other bump:2.98816 Ang D8.C and L14.CG other bump:2.71354 Ang Y4.CE1 and A6.CB T0191 62 :GFNVTIP 1dl5A 144 :PYDVIFV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 69 :HKI 1dl5A 155 :DEV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues T0191 73 :IMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYNTDG 1dl5A 158 :PETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKD Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 37 residues other bump:2.23035 Ang I30.CD1 and Y32.OH other bump:2.81198 Ang I30.CG2 and Y32.CZ other bump:2.97294 Ang I30.CB and Y32.CE2 other bump:2.41371 Ang I30.CG2 and Y32.CE2 other bump:2.91565 Ang I30.CG2 and Y32.CD2 other bump:2.58626 Ang I9.CG1 and A13.CB other bump:2.99981 Ang I9.CD1 and A13.CB Number of specific fragments= 6 total=220 Number of alignments=68 # Reading fragments from alignment file # T0191 read from 1dl5A-T0191-local-adpstyle1.pw.a2m.gz # 1dl5A read from 1dl5A-T0191-local-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 39 :VAFDVLPENLKYVIDGAKALGI 1dl5A 104 :VSVEYSRKICEIAKRNVERLGI Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.47286 Ang E9.O and Y13.CD1 other bump:2.70072 Ang D5.OD1 and L11.CD2 other bump:2.20458 Ang D5.CG and L11.CD2 other bump:2.80986 Ang D5.N and L11.CD2 other bump:2.4331 Ang D5.CA and L11.CD2 other bump:1.18338 Ang D5.CB and L11.CD2 other bump:2.90155 Ang D5.C and L11.CD2 other bump:1.61674 Ang D5.O and L11.CD1 other bump:2.69368 Ang D5.C and L11.CD1 other bump:2.54422 Ang D5.CG and L11.CG other bump:2.43207 Ang D5.O and L11.CG other bump:2.29298 Ang D5.CB and L11.CG other bump:2.98816 Ang D5.C and L11.CG T0191 63 :FNVTI 1dl5A 126 :ENVIF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues Number of specific fragments= 2 total=222 Number of alignments=69 # Reading fragments from alignment file # T0191 read from 1dl5A-T0191-local-adpstyle5.pw.a2m.gz # 1dl5A read from 1dl5A-T0191-local-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 39 :VAFDVLPENLKYVIDGAKALGI 1dl5A 104 :VSVEYSRKICEIAKRNVERLGI Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.47286 Ang E9.O and Y13.CD1 other bump:2.70072 Ang D5.OD1 and L11.CD2 other bump:2.20458 Ang D5.CG and L11.CD2 other bump:2.80986 Ang D5.N and L11.CD2 other bump:2.4331 Ang D5.CA and L11.CD2 other bump:1.18338 Ang D5.CB and L11.CD2 other bump:2.90155 Ang D5.C and L11.CD2 other bump:1.61674 Ang D5.O and L11.CD1 other bump:2.69368 Ang D5.C and L11.CD1 other bump:2.54422 Ang D5.CG and L11.CG other bump:2.43207 Ang D5.O and L11.CG other bump:2.29298 Ang D5.CB and L11.CG other bump:2.98816 Ang D5.C and L11.CG Number of specific fragments= 1 total=223 Number of alignments=70 # Reading fragments from alignment file # T0191 read from 1dl5A-T0191-vit-adpstyle1.pw.a2m.gz # 1dl5A read from 1dl5A-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 39 :VAFDVLPENLKYVIDGAKALGI 1dl5A 104 :VSVEYSRKICEIAKRNVERLGI Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.47286 Ang E9.O and Y13.CD1 other bump:2.70072 Ang D5.OD1 and L11.CD2 other bump:2.20458 Ang D5.CG and L11.CD2 other bump:2.80986 Ang D5.N and L11.CD2 other bump:2.4331 Ang D5.CA and L11.CD2 other bump:1.18338 Ang D5.CB and L11.CD2 other bump:2.90155 Ang D5.C and L11.CD2 other bump:1.61674 Ang D5.O and L11.CD1 other bump:2.69368 Ang D5.C and L11.CD1 other bump:2.54422 Ang D5.CG and L11.CG other bump:2.43207 Ang D5.O and L11.CG other bump:2.29298 Ang D5.CB and L11.CG other bump:2.98816 Ang D5.C and L11.CG T0191 63 :FNVTI 1dl5A 126 :ENVIF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues Number of specific fragments= 2 total=225 Number of alignments=71 # Reading fragments from alignment file # T0191 read from 1dl5A-T0191-vit-adpstyle5.pw.a2m.gz # 1dl5A read from 1dl5A-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 39 :VAFDVLPENLKYVIDGAKALGI 1dl5A 104 :VSVEYSRKICEIAKRNVERLGI Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.47286 Ang E9.O and Y13.CD1 other bump:2.70072 Ang D5.OD1 and L11.CD2 other bump:2.20458 Ang D5.CG and L11.CD2 other bump:2.80986 Ang D5.N and L11.CD2 other bump:2.4331 Ang D5.CA and L11.CD2 other bump:1.18338 Ang D5.CB and L11.CD2 other bump:2.90155 Ang D5.C and L11.CD2 other bump:1.61674 Ang D5.O and L11.CD1 other bump:2.69368 Ang D5.C and L11.CD1 other bump:2.54422 Ang D5.CG and L11.CG other bump:2.43207 Ang D5.O and L11.CG other bump:2.29298 Ang D5.CB and L11.CG other bump:2.98816 Ang D5.C and L11.CG Number of specific fragments= 1 total=226 Number of alignments=72 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 2 :INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 41 :YEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 143 clashes (null) has 143 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L48.CG and L77.C other bump:1.84821 Ang L48.CD1 and L77.C other bump:3.12638 Ang L48.CD2 and L77.C other bump:1.69168 Ang L48.CD1 and L77.O other bump:2.90966 Ang L48.CG and L77.CD2 other bump:1.96333 Ang L48.CD2 and L77.CD2 other bump:2.54346 Ang N47.O and L77.CD1 other bump:1.39099 Ang L48.CB and L77.CD1 other bump:0.877304 Ang L48.CG and L77.CD1 other bump:2.34478 Ang L48.CD1 and L77.CD1 other bump:1.26848 Ang L48.CD2 and L77.CD1 other bump:2.66744 Ang N47.C and L77.CD1 other bump:2.54403 Ang L48.N and L77.CD1 other bump:2.14776 Ang L48.CA and L77.CD1 other bump:2.86835 Ang L48.CB and L77.CG other bump:1.58786 Ang L48.CG and L77.CG other bump:2.55716 Ang L48.CD1 and L77.CG other bump:0.931064 Ang L48.CD2 and L77.CG other bump:2.09646 Ang L48.CG and L77.CB other bump:2.48671 Ang L48.CD1 and L77.CB other bump:2.35977 Ang L48.CD2 and L77.CB other bump:2.28694 Ang L48.CG and L77.CA other bump:1.65424 Ang L48.CD1 and L77.CA other bump:3.02711 Ang L48.CD2 and L77.CA other bump:2.47286 Ang E72.O and Y76.CD1 other bump:2.37889 Ang P68.CA and M74.CE other bump:0.346255 Ang P68.O and M74.CE other bump:1.18355 Ang P68.C and M74.CE other bump:2.16934 Ang H69.N and M74.CE other bump:2.74892 Ang H69.CA and M74.CE other bump:2.73975 Ang P68.N and M74.CE other bump:1.54438 Ang P68.O and M74.SD other bump:2.68438 Ang P68.C and M74.SD other bump:2.65776 Ang P68.CB and M74.CG other bump:2.65885 Ang P68.CG and M74.CG other bump:2.4478 Ang P68.O and M74.CG other bump:3.01227 Ang P68.C and M74.CG other bump:3.25508 Ang E17.CD and I73.CG2 other bump:2.56697 Ang E17.OE2 and I73.CG2 other bump:1.72582 Ang P15.CD and K70.NZ other bump:2.14694 Ang P15.CG and K70.NZ other bump:1.42343 Ang P15.CD and K70.CE other bump:2.15505 Ang P15.CG and K70.CE other bump:2.89144 Ang P15.CD and K70.CD other bump:2.99319 Ang P45.CG and P68.N other bump:2.27726 Ang P45.CG and I67.C other bump:2.49857 Ang P45.CD and I67.C other bump:2.028 Ang P45.CG and I67.O other bump:1.54629 Ang P45.CD and I67.O other bump:2.87652 Ang F41.CE1 and I67.CG2 other bump:3.07801 Ang F41.CZ and I67.CG2 other bump:2.92363 Ang P45.CG and I67.CA other bump:2.60645 Ang P45.CG and I67.N other bump:3.06021 Ang P45.CG and T66.C other bump:2.27434 Ang V51.CG2 and T66.OG1 other bump:2.87399 Ang P45.CA and T66.CG2 other bump:2.26825 Ang P45.CB and T66.CG2 other bump:2.36814 Ang P45.CG and T66.CG2 other bump:3.04294 Ang D42.OD2 and T66.CG2 other bump:2.94302 Ang F63.CZ and V65.CG2 other bump:2.88874 Ang F63.CD2 and V65.CG2 other bump:1.99187 Ang F63.CE2 and V65.CG2 other bump:2.71235 Ang A55.CA and N64.ND2 other bump:2.48756 Ang Y38.O and L58.CD2 other bump:2.79002 Ang L34.CD1 and L58.CD1 other bump:2.66508 Ang D42.OD2 and V51.CG2 other bump:2.62382 Ang F29.CG and Y50.OH other bump:1.76498 Ang F29.CD1 and Y50.OH other bump:1.32034 Ang F29.CE1 and Y50.OH other bump:2.79851 Ang F29.CE2 and Y50.OH other bump:2.02665 Ang F29.CZ and Y50.OH other bump:2.9775 Ang H25.ND1 and Y50.CZ other bump:1.8034 Ang F29.CE1 and Y50.CZ other bump:2.75713 Ang F29.CE2 and Y50.CZ other bump:1.70492 Ang F29.CZ and Y50.CZ other bump:2.15623 Ang F29.CE1 and Y50.CE2 other bump:2.15759 Ang F29.CZ and Y50.CE2 other bump:2.50693 Ang H25.CB and Y50.CE1 other bump:2.6895 Ang H25.CG and Y50.CE1 other bump:2.21061 Ang H25.ND1 and Y50.CE1 other bump:3.01171 Ang F29.CE1 and Y50.CE1 other bump:2.94243 Ang F29.CE2 and Y50.CE1 other bump:2.39965 Ang F29.CZ and Y50.CE1 other bump:3.01702 Ang F29.CZ and Y50.CD2 other bump:2.01884 Ang H25.ND1 and Y50.CD1 neighbor-bump: 2.6735 Ang N47.O and L48.CD1 neighbor-bump: 2.20769 Ang N47.O and L48.CG neighbor-bump: 2.61795 Ang N47.C and L48.CG neighbor-bump: 1.82484 Ang N47.O and L48.CB neighbor-bump: 2.31819 Ang N47.C and L48.CB other bump:2.52485 Ang I9.CD1 and N47.OD1 other bump:2.61465 Ang I9.CD1 and N47.CG other bump:3.09296 Ang I9.CD1 and N47.CB other bump:2.76505 Ang E17.OE1 and N47.CB other bump:2.63237 Ang E17.CD and N47.N other bump:2.27582 Ang E17.OE2 and N47.N other bump:2.98758 Ang E17.CD and E46.C other bump:2.0636 Ang E17.OE2 and E46.C other bump:2.786 Ang E17.CA and E46.OE2 other bump:2.60153 Ang E17.C and E46.OE1 other bump:1.90329 Ang E17.CA and E46.OE1 other bump:0.963982 Ang E17.CG and E46.OE1 other bump:2.26663 Ang E17.CD and E46.OE1 other bump:1.17636 Ang E17.CB and E46.OE1 other bump:2.65608 Ang E17.CA and E46.CD other bump:1.92151 Ang E17.CG and E46.CD other bump:2.87261 Ang E17.CD and E46.CD other bump:2.29419 Ang E17.CB and E46.CD other bump:2.59124 Ang E17.CG and E46.CG other bump:2.76792 Ang E17.CD and E46.CG other bump:2.20008 Ang E17.OE2 and E46.CG other bump:2.46728 Ang E17.CG and E46.CB other bump:1.96135 Ang E17.CD and E46.CB other bump:1.20791 Ang E17.OE2 and E46.CB self-bump: 1.25601 Ang E46.CA and E46.CB other bump:2.907 Ang E17.CD and E46.CA other bump:1.88673 Ang E17.OE2 and E46.CA self-bump: 1.32748 Ang P45.N and P45.CD neighbor-bump: 2.5325 Ang L44.N and P45.CD self-bump: 2.19717 Ang P45.N and P45.CG neighbor-bump: 2.53999 Ang V43.C and L44.CB neighbor-bump: 2.25913 Ang V43.O and L44.CB other bump:2.67598 Ang N35.CB and Y38.CE2 other bump:2.47929 Ang N35.O and Y38.CD2 other bump:3.05107 Ang N35.C and Y38.CD2 neighbor-bump: 2.20027 Ang Y36.O and V37.CB neighbor-bump: 2.49905 Ang Y36.C and V37.CB other bump:1.97978 Ang A27.O and D31.OD2 other bump:2.7039 Ang A27.C and D31.OD2 other bump:2.06335 Ang F20.CB and H25.NE2 other bump:2.22916 Ang F20.CG and H25.NE2 other bump:2.60075 Ang F20.CD2 and H25.NE2 other bump:2.94194 Ang F20.CD2 and H25.CE1 other bump:2.51453 Ang F20.CB and H25.CD2 other bump:2.42018 Ang I9.CG1 and E17.OE1 other bump:1.89522 Ang I9.CD1 and E17.OE1 other bump:3.0744 Ang I9.CG1 and E17.CD other bump:2.47201 Ang I9.CD1 and E17.CD other bump:3.01406 Ang I9.CG1 and E17.CG other bump:2.06622 Ang G1.O and K7.NZ other bump:2.87276 Ang G1.C and K7.NZ other bump:2.43982 Ang G1.O and K7.CE other bump:3.09508 Ang G1.C and K7.CE T0191 81 :DKDAQLIGAVNTIKIEDGK 1dl5A 117 :KRNVERLGIENVIFVCGDG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:2.84087 Ang D2.OD1 and K15.CD other bump:3.14878 Ang G1.C and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues Number of specific fragments= 4 total=230 Number of alignments=73 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 3 :NAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 42 :EDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 139 clashes (null) has 139 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 77 residues other bump:2.88741 Ang L47.CG and L76.C other bump:1.84821 Ang L47.CD1 and L76.C other bump:3.12638 Ang L47.CD2 and L76.C other bump:1.69168 Ang L47.CD1 and L76.O other bump:2.90966 Ang L47.CG and L76.CD2 other bump:1.96333 Ang L47.CD2 and L76.CD2 other bump:2.54346 Ang N46.O and L76.CD1 other bump:1.39099 Ang L47.CB and L76.CD1 other bump:0.877304 Ang L47.CG and L76.CD1 other bump:2.34478 Ang L47.CD1 and L76.CD1 other bump:1.26848 Ang L47.CD2 and L76.CD1 other bump:2.66744 Ang N46.C and L76.CD1 other bump:2.54403 Ang L47.N and L76.CD1 other bump:2.14776 Ang L47.CA and L76.CD1 other bump:2.86835 Ang L47.CB and L76.CG other bump:1.58786 Ang L47.CG and L76.CG other bump:2.55716 Ang L47.CD1 and L76.CG other bump:0.931064 Ang L47.CD2 and L76.CG other bump:2.09646 Ang L47.CG and L76.CB other bump:2.48671 Ang L47.CD1 and L76.CB other bump:2.35977 Ang L47.CD2 and L76.CB other bump:2.28694 Ang L47.CG and L76.CA other bump:1.65424 Ang L47.CD1 and L76.CA other bump:3.02711 Ang L47.CD2 and L76.CA other bump:2.47286 Ang E71.O and Y75.CD1 other bump:2.37889 Ang P67.CA and M73.CE other bump:0.346255 Ang P67.O and M73.CE other bump:1.18355 Ang P67.C and M73.CE other bump:2.16934 Ang H68.N and M73.CE other bump:2.74892 Ang H68.CA and M73.CE other bump:2.73975 Ang P67.N and M73.CE other bump:1.54438 Ang P67.O and M73.SD other bump:2.68438 Ang P67.C and M73.SD other bump:2.65776 Ang P67.CB and M73.CG other bump:2.65885 Ang P67.CG and M73.CG other bump:2.4478 Ang P67.O and M73.CG other bump:3.01227 Ang P67.C and M73.CG other bump:3.25508 Ang E16.CD and I72.CG2 other bump:2.56697 Ang E16.OE2 and I72.CG2 other bump:1.72582 Ang P14.CD and K69.NZ other bump:2.14694 Ang P14.CG and K69.NZ other bump:1.42343 Ang P14.CD and K69.CE other bump:2.15505 Ang P14.CG and K69.CE other bump:2.89144 Ang P14.CD and K69.CD other bump:2.99319 Ang P44.CG and P67.N other bump:2.27726 Ang P44.CG and I66.C other bump:2.49857 Ang P44.CD and I66.C other bump:2.028 Ang P44.CG and I66.O other bump:1.54629 Ang P44.CD and I66.O other bump:2.87652 Ang F40.CE1 and I66.CG2 other bump:3.07801 Ang F40.CZ and I66.CG2 other bump:2.92363 Ang P44.CG and I66.CA other bump:2.60645 Ang P44.CG and I66.N other bump:3.06021 Ang P44.CG and T65.C other bump:2.27434 Ang V50.CG2 and T65.OG1 other bump:2.87399 Ang P44.CA and T65.CG2 other bump:2.26825 Ang P44.CB and T65.CG2 other bump:2.36814 Ang P44.CG and T65.CG2 other bump:3.04294 Ang D41.OD2 and T65.CG2 other bump:2.94302 Ang F62.CZ and V64.CG2 other bump:2.88874 Ang F62.CD2 and V64.CG2 other bump:1.99187 Ang F62.CE2 and V64.CG2 other bump:2.71235 Ang A54.CA and N63.ND2 other bump:2.48756 Ang Y37.O and L57.CD2 other bump:2.79002 Ang L33.CD1 and L57.CD1 other bump:2.66508 Ang D41.OD2 and V50.CG2 other bump:2.62382 Ang F28.CG and Y49.OH other bump:1.76498 Ang F28.CD1 and Y49.OH other bump:1.32034 Ang F28.CE1 and Y49.OH other bump:2.79851 Ang F28.CE2 and Y49.OH other bump:2.02665 Ang F28.CZ and Y49.OH other bump:2.9775 Ang H24.ND1 and Y49.CZ other bump:1.8034 Ang F28.CE1 and Y49.CZ other bump:2.75713 Ang F28.CE2 and Y49.CZ other bump:1.70492 Ang F28.CZ and Y49.CZ other bump:2.15623 Ang F28.CE1 and Y49.CE2 other bump:2.15759 Ang F28.CZ and Y49.CE2 other bump:2.50693 Ang H24.CB and Y49.CE1 other bump:2.6895 Ang H24.CG and Y49.CE1 other bump:2.21061 Ang H24.ND1 and Y49.CE1 other bump:3.01171 Ang F28.CE1 and Y49.CE1 other bump:2.94243 Ang F28.CE2 and Y49.CE1 other bump:2.39965 Ang F28.CZ and Y49.CE1 other bump:3.01702 Ang F28.CZ and Y49.CD2 other bump:2.01884 Ang H24.ND1 and Y49.CD1 neighbor-bump: 2.6735 Ang N46.O and L47.CD1 neighbor-bump: 2.20769 Ang N46.O and L47.CG neighbor-bump: 2.61795 Ang N46.C and L47.CG neighbor-bump: 1.82484 Ang N46.O and L47.CB neighbor-bump: 2.31819 Ang N46.C and L47.CB other bump:2.52485 Ang I8.CD1 and N46.OD1 other bump:2.61465 Ang I8.CD1 and N46.CG other bump:3.09296 Ang I8.CD1 and N46.CB other bump:2.76505 Ang E16.OE1 and N46.CB other bump:2.63237 Ang E16.CD and N46.N other bump:2.27582 Ang E16.OE2 and N46.N other bump:2.98758 Ang E16.CD and E45.C other bump:2.0636 Ang E16.OE2 and E45.C other bump:2.786 Ang E16.CA and E45.OE2 other bump:2.60153 Ang E16.C and E45.OE1 other bump:1.90329 Ang E16.CA and E45.OE1 other bump:0.963982 Ang E16.CG and E45.OE1 other bump:2.26663 Ang E16.CD and E45.OE1 other bump:1.17636 Ang E16.CB and E45.OE1 other bump:2.65608 Ang E16.CA and E45.CD other bump:1.92151 Ang E16.CG and E45.CD other bump:2.87261 Ang E16.CD and E45.CD other bump:2.29419 Ang E16.CB and E45.CD other bump:2.59124 Ang E16.CG and E45.CG other bump:2.76792 Ang E16.CD and E45.CG other bump:2.20008 Ang E16.OE2 and E45.CG other bump:2.46728 Ang E16.CG and E45.CB other bump:1.96135 Ang E16.CD and E45.CB other bump:1.20791 Ang E16.OE2 and E45.CB self-bump: 1.25601 Ang E45.CA and E45.CB other bump:2.907 Ang E16.CD and E45.CA other bump:1.88673 Ang E16.OE2 and E45.CA self-bump: 1.32748 Ang P44.N and P44.CD neighbor-bump: 2.5325 Ang L43.N and P44.CD self-bump: 2.19717 Ang P44.N and P44.CG neighbor-bump: 2.53999 Ang V42.C and L43.CB neighbor-bump: 2.25913 Ang V42.O and L43.CB other bump:2.67598 Ang N34.CB and Y37.CE2 other bump:2.47929 Ang N34.O and Y37.CD2 other bump:3.05107 Ang N34.C and Y37.CD2 neighbor-bump: 2.20027 Ang Y35.O and V36.CB neighbor-bump: 2.49905 Ang Y35.C and V36.CB other bump:1.97978 Ang A26.O and D30.OD2 other bump:2.7039 Ang A26.C and D30.OD2 other bump:2.06335 Ang F19.CB and H24.NE2 other bump:2.22916 Ang F19.CG and H24.NE2 other bump:2.60075 Ang F19.CD2 and H24.NE2 other bump:2.94194 Ang F19.CD2 and H24.CE1 other bump:2.51453 Ang F19.CB and H24.CD2 other bump:2.42018 Ang I8.CG1 and E16.OE1 other bump:1.89522 Ang I8.CD1 and E16.OE1 other bump:3.0744 Ang I8.CG1 and E16.CD other bump:2.47201 Ang I8.CD1 and E16.CD other bump:3.01406 Ang I8.CG1 and E16.CG T0191 81 :DKDAQLIGAVNTIKIEDGK 1dl5A 117 :KRNVERLGIENVIFVCGDG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:2.84087 Ang D2.OD1 and K15.CD other bump:3.14878 Ang G1.C and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 108 :IG 1dl5A 315 :CS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 5 total=235 Number of alignments=74 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 13 :GHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 52 :GEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 131 clashes (null) has 131 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 67 residues other bump:2.88741 Ang L37.CG and L66.C other bump:1.84821 Ang L37.CD1 and L66.C other bump:3.12638 Ang L37.CD2 and L66.C other bump:1.69168 Ang L37.CD1 and L66.O other bump:2.90966 Ang L37.CG and L66.CD2 other bump:1.96333 Ang L37.CD2 and L66.CD2 other bump:2.54346 Ang N36.O and L66.CD1 other bump:1.39099 Ang L37.CB and L66.CD1 other bump:0.877304 Ang L37.CG and L66.CD1 other bump:2.34478 Ang L37.CD1 and L66.CD1 other bump:1.26848 Ang L37.CD2 and L66.CD1 other bump:2.66744 Ang N36.C and L66.CD1 other bump:2.54403 Ang L37.N and L66.CD1 other bump:2.14776 Ang L37.CA and L66.CD1 other bump:2.86835 Ang L37.CB and L66.CG other bump:1.58786 Ang L37.CG and L66.CG other bump:2.55716 Ang L37.CD1 and L66.CG other bump:0.931064 Ang L37.CD2 and L66.CG other bump:2.09646 Ang L37.CG and L66.CB other bump:2.48671 Ang L37.CD1 and L66.CB other bump:2.35977 Ang L37.CD2 and L66.CB other bump:2.28694 Ang L37.CG and L66.CA other bump:1.65424 Ang L37.CD1 and L66.CA other bump:3.02711 Ang L37.CD2 and L66.CA other bump:2.47286 Ang E61.O and Y65.CD1 other bump:2.37889 Ang P57.CA and M63.CE other bump:0.346255 Ang P57.O and M63.CE other bump:1.18355 Ang P57.C and M63.CE other bump:2.16934 Ang H58.N and M63.CE other bump:2.74892 Ang H58.CA and M63.CE other bump:2.73975 Ang P57.N and M63.CE other bump:1.54438 Ang P57.O and M63.SD other bump:2.68438 Ang P57.C and M63.SD other bump:2.65776 Ang P57.CB and M63.CG other bump:2.65885 Ang P57.CG and M63.CG other bump:2.4478 Ang P57.O and M63.CG other bump:3.01227 Ang P57.C and M63.CG other bump:3.25508 Ang E6.CD and I62.CG2 other bump:2.56697 Ang E6.OE2 and I62.CG2 other bump:1.72582 Ang P4.CD and K59.NZ other bump:2.14694 Ang P4.CG and K59.NZ other bump:1.42343 Ang P4.CD and K59.CE other bump:2.15505 Ang P4.CG and K59.CE other bump:2.89144 Ang P4.CD and K59.CD other bump:2.99319 Ang P34.CG and P57.N other bump:2.27726 Ang P34.CG and I56.C other bump:2.49857 Ang P34.CD and I56.C other bump:2.028 Ang P34.CG and I56.O other bump:1.54629 Ang P34.CD and I56.O other bump:2.87652 Ang F30.CE1 and I56.CG2 other bump:3.07801 Ang F30.CZ and I56.CG2 other bump:2.92363 Ang P34.CG and I56.CA other bump:2.60645 Ang P34.CG and I56.N other bump:3.06021 Ang P34.CG and T55.C other bump:2.27434 Ang V40.CG2 and T55.OG1 other bump:2.87399 Ang P34.CA and T55.CG2 other bump:2.26825 Ang P34.CB and T55.CG2 other bump:2.36814 Ang P34.CG and T55.CG2 other bump:3.04294 Ang D31.OD2 and T55.CG2 other bump:2.94302 Ang F52.CZ and V54.CG2 other bump:2.88874 Ang F52.CD2 and V54.CG2 other bump:1.99187 Ang F52.CE2 and V54.CG2 other bump:2.71235 Ang A44.CA and N53.ND2 other bump:2.48756 Ang Y27.O and L47.CD2 other bump:2.79002 Ang L23.CD1 and L47.CD1 other bump:2.66508 Ang D31.OD2 and V40.CG2 other bump:2.62382 Ang F18.CG and Y39.OH other bump:1.76498 Ang F18.CD1 and Y39.OH other bump:1.32034 Ang F18.CE1 and Y39.OH other bump:2.79851 Ang F18.CE2 and Y39.OH other bump:2.02665 Ang F18.CZ and Y39.OH other bump:2.9775 Ang H14.ND1 and Y39.CZ other bump:1.8034 Ang F18.CE1 and Y39.CZ other bump:2.75713 Ang F18.CE2 and Y39.CZ other bump:1.70492 Ang F18.CZ and Y39.CZ other bump:2.15623 Ang F18.CE1 and Y39.CE2 other bump:2.15759 Ang F18.CZ and Y39.CE2 other bump:2.50693 Ang H14.CB and Y39.CE1 other bump:2.6895 Ang H14.CG and Y39.CE1 other bump:2.21061 Ang H14.ND1 and Y39.CE1 other bump:3.01171 Ang F18.CE1 and Y39.CE1 other bump:2.94243 Ang F18.CE2 and Y39.CE1 other bump:2.39965 Ang F18.CZ and Y39.CE1 other bump:3.01702 Ang F18.CZ and Y39.CD2 other bump:2.01884 Ang H14.ND1 and Y39.CD1 neighbor-bump: 2.6735 Ang N36.O and L37.CD1 neighbor-bump: 2.20769 Ang N36.O and L37.CG neighbor-bump: 2.61795 Ang N36.C and L37.CG neighbor-bump: 1.82484 Ang N36.O and L37.CB neighbor-bump: 2.31819 Ang N36.C and L37.CB other bump:2.76505 Ang E6.OE1 and N36.CB other bump:2.63237 Ang E6.CD and N36.N other bump:2.27582 Ang E6.OE2 and N36.N other bump:2.98758 Ang E6.CD and E35.C other bump:2.0636 Ang E6.OE2 and E35.C other bump:2.786 Ang E6.CA and E35.OE2 other bump:2.60153 Ang E6.C and E35.OE1 other bump:1.90329 Ang E6.CA and E35.OE1 other bump:0.963982 Ang E6.CG and E35.OE1 other bump:2.26663 Ang E6.CD and E35.OE1 other bump:1.17636 Ang E6.CB and E35.OE1 other bump:2.65608 Ang E6.CA and E35.CD other bump:1.92151 Ang E6.CG and E35.CD other bump:2.87261 Ang E6.CD and E35.CD other bump:2.29419 Ang E6.CB and E35.CD other bump:2.59124 Ang E6.CG and E35.CG other bump:2.76792 Ang E6.CD and E35.CG other bump:2.20008 Ang E6.OE2 and E35.CG other bump:2.46728 Ang E6.CG and E35.CB other bump:1.96135 Ang E6.CD and E35.CB other bump:1.20791 Ang E6.OE2 and E35.CB self-bump: 1.25601 Ang E35.CA and E35.CB other bump:2.907 Ang E6.CD and E35.CA other bump:1.88673 Ang E6.OE2 and E35.CA self-bump: 1.32748 Ang P34.N and P34.CD neighbor-bump: 2.5325 Ang L33.N and P34.CD self-bump: 2.19717 Ang P34.N and P34.CG neighbor-bump: 2.53999 Ang V32.C and L33.CB neighbor-bump: 2.25913 Ang V32.O and L33.CB other bump:2.67598 Ang N24.CB and Y27.CE2 other bump:2.47929 Ang N24.O and Y27.CD2 other bump:3.05107 Ang N24.C and Y27.CD2 neighbor-bump: 2.20027 Ang Y25.O and V26.CB neighbor-bump: 2.49905 Ang Y25.C and V26.CB other bump:1.97978 Ang A16.O and D20.OD2 other bump:2.7039 Ang A16.C and D20.OD2 other bump:2.06335 Ang F9.CB and H14.NE2 other bump:2.22916 Ang F9.CG and H14.NE2 other bump:2.60075 Ang F9.CD2 and H14.NE2 other bump:2.94194 Ang F9.CD2 and H14.CE1 other bump:2.51453 Ang F9.CB and H14.CD2 T0191 81 :DKDAQLIGAVNTIKI 1dl5A 117 :KRNVERLGIENVIFV Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=237 Number of alignments=75 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 44 :IVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 139 clashes (null) has 139 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 75 residues other bump:2.88741 Ang L45.CG and L74.C other bump:1.84821 Ang L45.CD1 and L74.C other bump:3.12638 Ang L45.CD2 and L74.C other bump:1.69168 Ang L45.CD1 and L74.O other bump:2.90966 Ang L45.CG and L74.CD2 other bump:1.96333 Ang L45.CD2 and L74.CD2 other bump:2.54346 Ang N44.O and L74.CD1 other bump:1.39099 Ang L45.CB and L74.CD1 other bump:0.877304 Ang L45.CG and L74.CD1 other bump:2.34478 Ang L45.CD1 and L74.CD1 other bump:1.26848 Ang L45.CD2 and L74.CD1 other bump:2.66744 Ang N44.C and L74.CD1 other bump:2.54403 Ang L45.N and L74.CD1 other bump:2.14776 Ang L45.CA and L74.CD1 other bump:2.86835 Ang L45.CB and L74.CG other bump:1.58786 Ang L45.CG and L74.CG other bump:2.55716 Ang L45.CD1 and L74.CG other bump:0.931064 Ang L45.CD2 and L74.CG other bump:2.09646 Ang L45.CG and L74.CB other bump:2.48671 Ang L45.CD1 and L74.CB other bump:2.35977 Ang L45.CD2 and L74.CB other bump:2.28694 Ang L45.CG and L74.CA other bump:1.65424 Ang L45.CD1 and L74.CA other bump:3.02711 Ang L45.CD2 and L74.CA other bump:2.47286 Ang E69.O and Y73.CD1 other bump:2.37889 Ang P65.CA and M71.CE other bump:0.346255 Ang P65.O and M71.CE other bump:1.18355 Ang P65.C and M71.CE other bump:2.16934 Ang H66.N and M71.CE other bump:2.74892 Ang H66.CA and M71.CE other bump:2.73975 Ang P65.N and M71.CE other bump:1.54438 Ang P65.O and M71.SD other bump:2.68438 Ang P65.C and M71.SD other bump:2.65776 Ang P65.CB and M71.CG other bump:2.65885 Ang P65.CG and M71.CG other bump:2.4478 Ang P65.O and M71.CG other bump:3.01227 Ang P65.C and M71.CG other bump:3.25508 Ang E14.CD and I70.CG2 other bump:2.56697 Ang E14.OE2 and I70.CG2 other bump:1.72582 Ang P12.CD and K67.NZ other bump:2.14694 Ang P12.CG and K67.NZ other bump:1.42343 Ang P12.CD and K67.CE other bump:2.15505 Ang P12.CG and K67.CE other bump:2.89144 Ang P12.CD and K67.CD other bump:2.99319 Ang P42.CG and P65.N other bump:2.27726 Ang P42.CG and I64.C other bump:2.49857 Ang P42.CD and I64.C other bump:2.028 Ang P42.CG and I64.O other bump:1.54629 Ang P42.CD and I64.O other bump:2.87652 Ang F38.CE1 and I64.CG2 other bump:3.07801 Ang F38.CZ and I64.CG2 other bump:2.92363 Ang P42.CG and I64.CA other bump:2.60645 Ang P42.CG and I64.N other bump:3.06021 Ang P42.CG and T63.C other bump:2.27434 Ang V48.CG2 and T63.OG1 other bump:2.87399 Ang P42.CA and T63.CG2 other bump:2.26825 Ang P42.CB and T63.CG2 other bump:2.36814 Ang P42.CG and T63.CG2 other bump:3.04294 Ang D39.OD2 and T63.CG2 other bump:2.94302 Ang F60.CZ and V62.CG2 other bump:2.88874 Ang F60.CD2 and V62.CG2 other bump:1.99187 Ang F60.CE2 and V62.CG2 other bump:2.71235 Ang A52.CA and N61.ND2 other bump:2.48756 Ang Y35.O and L55.CD2 other bump:2.79002 Ang L31.CD1 and L55.CD1 other bump:2.66508 Ang D39.OD2 and V48.CG2 other bump:2.62382 Ang F26.CG and Y47.OH other bump:1.76498 Ang F26.CD1 and Y47.OH other bump:1.32034 Ang F26.CE1 and Y47.OH other bump:2.79851 Ang F26.CE2 and Y47.OH other bump:2.02665 Ang F26.CZ and Y47.OH other bump:2.9775 Ang H22.ND1 and Y47.CZ other bump:1.8034 Ang F26.CE1 and Y47.CZ other bump:2.75713 Ang F26.CE2 and Y47.CZ other bump:1.70492 Ang F26.CZ and Y47.CZ other bump:2.15623 Ang F26.CE1 and Y47.CE2 other bump:2.15759 Ang F26.CZ and Y47.CE2 other bump:2.50693 Ang H22.CB and Y47.CE1 other bump:2.6895 Ang H22.CG and Y47.CE1 other bump:2.21061 Ang H22.ND1 and Y47.CE1 other bump:3.01171 Ang F26.CE1 and Y47.CE1 other bump:2.94243 Ang F26.CE2 and Y47.CE1 other bump:2.39965 Ang F26.CZ and Y47.CE1 other bump:3.01702 Ang F26.CZ and Y47.CD2 other bump:2.01884 Ang H22.ND1 and Y47.CD1 neighbor-bump: 2.6735 Ang N44.O and L45.CD1 neighbor-bump: 2.20769 Ang N44.O and L45.CG neighbor-bump: 2.61795 Ang N44.C and L45.CG neighbor-bump: 1.82484 Ang N44.O and L45.CB neighbor-bump: 2.31819 Ang N44.C and L45.CB other bump:2.52485 Ang I6.CD1 and N44.OD1 other bump:2.61465 Ang I6.CD1 and N44.CG other bump:3.09296 Ang I6.CD1 and N44.CB other bump:2.76505 Ang E14.OE1 and N44.CB other bump:2.63237 Ang E14.CD and N44.N other bump:2.27582 Ang E14.OE2 and N44.N other bump:2.98758 Ang E14.CD and E43.C other bump:2.0636 Ang E14.OE2 and E43.C other bump:2.786 Ang E14.CA and E43.OE2 other bump:2.60153 Ang E14.C and E43.OE1 other bump:1.90329 Ang E14.CA and E43.OE1 other bump:0.963982 Ang E14.CG and E43.OE1 other bump:2.26663 Ang E14.CD and E43.OE1 other bump:1.17636 Ang E14.CB and E43.OE1 other bump:2.65608 Ang E14.CA and E43.CD other bump:1.92151 Ang E14.CG and E43.CD other bump:2.87261 Ang E14.CD and E43.CD other bump:2.29419 Ang E14.CB and E43.CD other bump:2.59124 Ang E14.CG and E43.CG other bump:2.76792 Ang E14.CD and E43.CG other bump:2.20008 Ang E14.OE2 and E43.CG other bump:2.46728 Ang E14.CG and E43.CB other bump:1.96135 Ang E14.CD and E43.CB other bump:1.20791 Ang E14.OE2 and E43.CB self-bump: 1.25601 Ang E43.CA and E43.CB other bump:2.907 Ang E14.CD and E43.CA other bump:1.88673 Ang E14.OE2 and E43.CA self-bump: 1.32748 Ang P42.N and P42.CD neighbor-bump: 2.5325 Ang L41.N and P42.CD self-bump: 2.19717 Ang P42.N and P42.CG neighbor-bump: 2.53999 Ang V40.C and L41.CB neighbor-bump: 2.25913 Ang V40.O and L41.CB other bump:2.67598 Ang N32.CB and Y35.CE2 other bump:2.47929 Ang N32.O and Y35.CD2 other bump:3.05107 Ang N32.C and Y35.CD2 neighbor-bump: 2.20027 Ang Y33.O and V34.CB neighbor-bump: 2.49905 Ang Y33.C and V34.CB other bump:1.97978 Ang A24.O and D28.OD2 other bump:2.7039 Ang A24.C and D28.OD2 other bump:2.06335 Ang F17.CB and H22.NE2 other bump:2.22916 Ang F17.CG and H22.NE2 other bump:2.60075 Ang F17.CD2 and H22.NE2 other bump:2.94194 Ang F17.CD2 and H22.CE1 other bump:2.51453 Ang F17.CB and H22.CD2 other bump:2.42018 Ang I6.CG1 and E14.OE1 other bump:1.89522 Ang I6.CD1 and E14.OE1 other bump:3.0744 Ang I6.CG1 and E14.CD other bump:2.47201 Ang I6.CD1 and E14.CD other bump:3.01406 Ang I6.CG1 and E14.CG T0191 81 :DKDAQLIGAVNTIKIED 1dl5A 117 :KRNVERLGIENVIFVCG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:2.84087 Ang D2.OD1 and K15.CD other bump:3.14878 Ang G1.C and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=239 Number of alignments=76 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 2 :INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 41 :YEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 143 clashes (null) has 143 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L48.CG and L77.C other bump:1.84821 Ang L48.CD1 and L77.C other bump:3.12638 Ang L48.CD2 and L77.C other bump:1.69168 Ang L48.CD1 and L77.O other bump:2.90966 Ang L48.CG and L77.CD2 other bump:1.96333 Ang L48.CD2 and L77.CD2 other bump:2.54346 Ang N47.O and L77.CD1 other bump:1.39099 Ang L48.CB and L77.CD1 other bump:0.877304 Ang L48.CG and L77.CD1 other bump:2.34478 Ang L48.CD1 and L77.CD1 other bump:1.26848 Ang L48.CD2 and L77.CD1 other bump:2.66744 Ang N47.C and L77.CD1 other bump:2.54403 Ang L48.N and L77.CD1 other bump:2.14776 Ang L48.CA and L77.CD1 other bump:2.86835 Ang L48.CB and L77.CG other bump:1.58786 Ang L48.CG and L77.CG other bump:2.55716 Ang L48.CD1 and L77.CG other bump:0.931064 Ang L48.CD2 and L77.CG other bump:2.09646 Ang L48.CG and L77.CB other bump:2.48671 Ang L48.CD1 and L77.CB other bump:2.35977 Ang L48.CD2 and L77.CB other bump:2.28694 Ang L48.CG and L77.CA other bump:1.65424 Ang L48.CD1 and L77.CA other bump:3.02711 Ang L48.CD2 and L77.CA other bump:2.47286 Ang E72.O and Y76.CD1 other bump:2.37889 Ang P68.CA and M74.CE other bump:0.346255 Ang P68.O and M74.CE other bump:1.18355 Ang P68.C and M74.CE other bump:2.16934 Ang H69.N and M74.CE other bump:2.74892 Ang H69.CA and M74.CE other bump:2.73975 Ang P68.N and M74.CE other bump:1.54438 Ang P68.O and M74.SD other bump:2.68438 Ang P68.C and M74.SD other bump:2.65776 Ang P68.CB and M74.CG other bump:2.65885 Ang P68.CG and M74.CG other bump:2.4478 Ang P68.O and M74.CG other bump:3.01227 Ang P68.C and M74.CG other bump:3.25508 Ang E17.CD and I73.CG2 other bump:2.56697 Ang E17.OE2 and I73.CG2 other bump:1.72582 Ang P15.CD and K70.NZ other bump:2.14694 Ang P15.CG and K70.NZ other bump:1.42343 Ang P15.CD and K70.CE other bump:2.15505 Ang P15.CG and K70.CE other bump:2.89144 Ang P15.CD and K70.CD other bump:2.99319 Ang P45.CG and P68.N other bump:2.27726 Ang P45.CG and I67.C other bump:2.49857 Ang P45.CD and I67.C other bump:2.028 Ang P45.CG and I67.O other bump:1.54629 Ang P45.CD and I67.O other bump:2.87652 Ang F41.CE1 and I67.CG2 other bump:3.07801 Ang F41.CZ and I67.CG2 other bump:2.92363 Ang P45.CG and I67.CA other bump:2.60645 Ang P45.CG and I67.N other bump:3.06021 Ang P45.CG and T66.C other bump:2.27434 Ang V51.CG2 and T66.OG1 other bump:2.87399 Ang P45.CA and T66.CG2 other bump:2.26825 Ang P45.CB and T66.CG2 other bump:2.36814 Ang P45.CG and T66.CG2 other bump:3.04294 Ang D42.OD2 and T66.CG2 other bump:2.94302 Ang F63.CZ and V65.CG2 other bump:2.88874 Ang F63.CD2 and V65.CG2 other bump:1.99187 Ang F63.CE2 and V65.CG2 other bump:2.71235 Ang A55.CA and N64.ND2 other bump:2.48756 Ang Y38.O and L58.CD2 other bump:2.79002 Ang L34.CD1 and L58.CD1 other bump:2.66508 Ang D42.OD2 and V51.CG2 other bump:2.62382 Ang F29.CG and Y50.OH other bump:1.76498 Ang F29.CD1 and Y50.OH other bump:1.32034 Ang F29.CE1 and Y50.OH other bump:2.79851 Ang F29.CE2 and Y50.OH other bump:2.02665 Ang F29.CZ and Y50.OH other bump:2.9775 Ang H25.ND1 and Y50.CZ other bump:1.8034 Ang F29.CE1 and Y50.CZ other bump:2.75713 Ang F29.CE2 and Y50.CZ other bump:1.70492 Ang F29.CZ and Y50.CZ other bump:2.15623 Ang F29.CE1 and Y50.CE2 other bump:2.15759 Ang F29.CZ and Y50.CE2 other bump:2.50693 Ang H25.CB and Y50.CE1 other bump:2.6895 Ang H25.CG and Y50.CE1 other bump:2.21061 Ang H25.ND1 and Y50.CE1 other bump:3.01171 Ang F29.CE1 and Y50.CE1 other bump:2.94243 Ang F29.CE2 and Y50.CE1 other bump:2.39965 Ang F29.CZ and Y50.CE1 other bump:3.01702 Ang F29.CZ and Y50.CD2 other bump:2.01884 Ang H25.ND1 and Y50.CD1 neighbor-bump: 2.6735 Ang N47.O and L48.CD1 neighbor-bump: 2.20769 Ang N47.O and L48.CG neighbor-bump: 2.61795 Ang N47.C and L48.CG neighbor-bump: 1.82484 Ang N47.O and L48.CB neighbor-bump: 2.31819 Ang N47.C and L48.CB other bump:2.52485 Ang I9.CD1 and N47.OD1 other bump:2.61465 Ang I9.CD1 and N47.CG other bump:3.09296 Ang I9.CD1 and N47.CB other bump:2.76505 Ang E17.OE1 and N47.CB other bump:2.63237 Ang E17.CD and N47.N other bump:2.27582 Ang E17.OE2 and N47.N other bump:2.98758 Ang E17.CD and E46.C other bump:2.0636 Ang E17.OE2 and E46.C other bump:2.786 Ang E17.CA and E46.OE2 other bump:2.60153 Ang E17.C and E46.OE1 other bump:1.90329 Ang E17.CA and E46.OE1 other bump:0.963982 Ang E17.CG and E46.OE1 other bump:2.26663 Ang E17.CD and E46.OE1 other bump:1.17636 Ang E17.CB and E46.OE1 other bump:2.65608 Ang E17.CA and E46.CD other bump:1.92151 Ang E17.CG and E46.CD other bump:2.87261 Ang E17.CD and E46.CD other bump:2.29419 Ang E17.CB and E46.CD other bump:2.59124 Ang E17.CG and E46.CG other bump:2.76792 Ang E17.CD and E46.CG other bump:2.20008 Ang E17.OE2 and E46.CG other bump:2.46728 Ang E17.CG and E46.CB other bump:1.96135 Ang E17.CD and E46.CB other bump:1.20791 Ang E17.OE2 and E46.CB self-bump: 1.25601 Ang E46.CA and E46.CB other bump:2.907 Ang E17.CD and E46.CA other bump:1.88673 Ang E17.OE2 and E46.CA self-bump: 1.32748 Ang P45.N and P45.CD neighbor-bump: 2.5325 Ang L44.N and P45.CD self-bump: 2.19717 Ang P45.N and P45.CG neighbor-bump: 2.53999 Ang V43.C and L44.CB neighbor-bump: 2.25913 Ang V43.O and L44.CB other bump:2.67598 Ang N35.CB and Y38.CE2 other bump:2.47929 Ang N35.O and Y38.CD2 other bump:3.05107 Ang N35.C and Y38.CD2 neighbor-bump: 2.20027 Ang Y36.O and V37.CB neighbor-bump: 2.49905 Ang Y36.C and V37.CB other bump:1.97978 Ang A27.O and D31.OD2 other bump:2.7039 Ang A27.C and D31.OD2 other bump:2.06335 Ang F20.CB and H25.NE2 other bump:2.22916 Ang F20.CG and H25.NE2 other bump:2.60075 Ang F20.CD2 and H25.NE2 other bump:2.94194 Ang F20.CD2 and H25.CE1 other bump:2.51453 Ang F20.CB and H25.CD2 other bump:2.42018 Ang I9.CG1 and E17.OE1 other bump:1.89522 Ang I9.CD1 and E17.OE1 other bump:3.0744 Ang I9.CG1 and E17.CD other bump:2.47201 Ang I9.CD1 and E17.CD other bump:3.01406 Ang I9.CG1 and E17.CG other bump:2.06622 Ang G1.O and K7.NZ other bump:2.87276 Ang G1.C and K7.NZ other bump:2.43982 Ang G1.O and K7.CE other bump:3.09508 Ang G1.C and K7.CE T0191 81 :DKDAQLIGAVNTIKIEDGK 1dl5A 117 :KRNVERLGIENVIFVCGDG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:2.84087 Ang D2.OD1 and K15.CD other bump:3.14878 Ang G1.C and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues Number of specific fragments= 4 total=243 Number of alignments=77 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 3 :NAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLD 1dl5A 42 :EDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK Fragment has 145 clashes (null) has 145 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L47.CG and L76.C other bump:1.84821 Ang L47.CD1 and L76.C other bump:3.12638 Ang L47.CD2 and L76.C other bump:1.69168 Ang L47.CD1 and L76.O other bump:2.62631 Ang N46.N and L76.CD2 other bump:1.80807 Ang N46.CA and L76.CD2 other bump:3.11958 Ang N46.CB and L76.CD2 other bump:1.73488 Ang N46.O and L76.CD2 other bump:2.39583 Ang L47.CB and L76.CD2 other bump:2.05517 Ang L47.CG and L76.CD2 other bump:1.08916 Ang N46.C and L76.CD2 other bump:1.70473 Ang L47.N and L76.CD2 other bump:2.64451 Ang L47.CA and L76.CD2 other bump:2.59853 Ang E45.O and L76.CD2 other bump:2.89934 Ang E45.C and L76.CD2 other bump:1.32115 Ang E45.O and L76.CD1 other bump:2.41674 Ang E45.C and L76.CD1 other bump:3.14713 Ang N46.N and L76.CG other bump:2.62505 Ang N46.CA and L76.CG other bump:2.48792 Ang L47.CG and L76.CG other bump:2.57713 Ang N46.C and L76.CG other bump:3.01854 Ang L47.N and L76.CG other bump:1.95201 Ang E45.O and L76.CG other bump:2.84695 Ang E45.C and L76.CG other bump:2.03905 Ang L47.CG and L76.CB other bump:2.4301 Ang L47.CD1 and L76.CB other bump:2.31347 Ang L47.CD2 and L76.CB other bump:2.28694 Ang L47.CG and L76.CA other bump:1.65424 Ang L47.CD1 and L76.CA other bump:3.02711 Ang L47.CD2 and L76.CA other bump:2.47286 Ang E71.O and Y75.CD1 other bump:2.37889 Ang P67.CA and M73.CE other bump:0.346255 Ang P67.O and M73.CE other bump:1.18355 Ang P67.C and M73.CE other bump:2.16934 Ang H68.N and M73.CE other bump:2.74892 Ang H68.CA and M73.CE other bump:2.73975 Ang P67.N and M73.CE other bump:1.54438 Ang P67.O and M73.SD other bump:2.68438 Ang P67.C and M73.SD other bump:2.65776 Ang P67.CB and M73.CG other bump:2.65885 Ang P67.CG and M73.CG other bump:2.4478 Ang P67.O and M73.CG other bump:3.01227 Ang P67.C and M73.CG other bump:3.25508 Ang E16.CD and I72.CG2 other bump:2.56697 Ang E16.OE2 and I72.CG2 other bump:1.72582 Ang P14.CD and K69.NZ other bump:2.14694 Ang P14.CG and K69.NZ other bump:1.42343 Ang P14.CD and K69.CE other bump:2.15505 Ang P14.CG and K69.CE other bump:2.89144 Ang P14.CD and K69.CD other bump:2.99319 Ang P44.CG and P67.N other bump:2.27726 Ang P44.CG and I66.C other bump:2.49857 Ang P44.CD and I66.C other bump:2.028 Ang P44.CG and I66.O other bump:1.54629 Ang P44.CD and I66.O other bump:2.87652 Ang F40.CE1 and I66.CG2 other bump:3.07801 Ang F40.CZ and I66.CG2 other bump:2.92363 Ang P44.CG and I66.CA other bump:2.60645 Ang P44.CG and I66.N other bump:3.06021 Ang P44.CG and T65.C other bump:2.27434 Ang V50.CG2 and T65.OG1 other bump:2.87399 Ang P44.CA and T65.CG2 other bump:2.26825 Ang P44.CB and T65.CG2 other bump:2.36814 Ang P44.CG and T65.CG2 other bump:3.04294 Ang D41.OD2 and T65.CG2 other bump:2.94302 Ang F62.CZ and V64.CG2 other bump:2.88874 Ang F62.CD2 and V64.CG2 other bump:1.99187 Ang F62.CE2 and V64.CG2 other bump:2.71235 Ang A54.CA and N63.ND2 other bump:2.48756 Ang Y37.O and L57.CD2 other bump:2.79002 Ang L33.CD1 and L57.CD1 other bump:2.66508 Ang D41.OD2 and V50.CG2 other bump:2.62382 Ang F28.CG and Y49.OH other bump:1.76498 Ang F28.CD1 and Y49.OH other bump:1.32034 Ang F28.CE1 and Y49.OH other bump:2.79851 Ang F28.CE2 and Y49.OH other bump:2.02665 Ang F28.CZ and Y49.OH other bump:2.9775 Ang H24.ND1 and Y49.CZ other bump:1.8034 Ang F28.CE1 and Y49.CZ other bump:2.75713 Ang F28.CE2 and Y49.CZ other bump:1.70492 Ang F28.CZ and Y49.CZ other bump:2.15623 Ang F28.CE1 and Y49.CE2 other bump:2.15759 Ang F28.CZ and Y49.CE2 other bump:2.50693 Ang H24.CB and Y49.CE1 other bump:2.6895 Ang H24.CG and Y49.CE1 other bump:2.21061 Ang H24.ND1 and Y49.CE1 other bump:3.01171 Ang F28.CE1 and Y49.CE1 other bump:2.94243 Ang F28.CE2 and Y49.CE1 other bump:2.39965 Ang F28.CZ and Y49.CE1 other bump:3.01702 Ang F28.CZ and Y49.CD2 other bump:2.01884 Ang H24.ND1 and Y49.CD1 neighbor-bump: 2.6735 Ang N46.O and L47.CD1 neighbor-bump: 2.20769 Ang N46.O and L47.CG neighbor-bump: 2.61795 Ang N46.C and L47.CG neighbor-bump: 1.82484 Ang N46.O and L47.CB neighbor-bump: 2.31819 Ang N46.C and L47.CB other bump:2.52485 Ang I8.CD1 and N46.OD1 other bump:2.61465 Ang I8.CD1 and N46.CG other bump:3.09296 Ang I8.CD1 and N46.CB other bump:2.76505 Ang E16.OE1 and N46.CB other bump:2.63237 Ang E16.CD and N46.N other bump:2.27582 Ang E16.OE2 and N46.N other bump:2.98758 Ang E16.CD and E45.C other bump:2.0636 Ang E16.OE2 and E45.C other bump:2.786 Ang E16.CA and E45.OE2 other bump:2.60153 Ang E16.C and E45.OE1 other bump:1.90329 Ang E16.CA and E45.OE1 other bump:0.963982 Ang E16.CG and E45.OE1 other bump:2.26663 Ang E16.CD and E45.OE1 other bump:1.17636 Ang E16.CB and E45.OE1 other bump:2.65608 Ang E16.CA and E45.CD other bump:1.92151 Ang E16.CG and E45.CD other bump:2.87261 Ang E16.CD and E45.CD other bump:2.29419 Ang E16.CB and E45.CD other bump:2.59124 Ang E16.CG and E45.CG other bump:2.76792 Ang E16.CD and E45.CG other bump:2.20008 Ang E16.OE2 and E45.CG other bump:2.46728 Ang E16.CG and E45.CB other bump:1.96135 Ang E16.CD and E45.CB other bump:1.20791 Ang E16.OE2 and E45.CB self-bump: 1.25601 Ang E45.CA and E45.CB other bump:2.907 Ang E16.CD and E45.CA other bump:1.88673 Ang E16.OE2 and E45.CA self-bump: 1.32748 Ang P44.N and P44.CD neighbor-bump: 2.5325 Ang L43.N and P44.CD self-bump: 2.19717 Ang P44.N and P44.CG neighbor-bump: 2.53999 Ang V42.C and L43.CB neighbor-bump: 2.25913 Ang V42.O and L43.CB other bump:2.67598 Ang N34.CB and Y37.CE2 other bump:2.47929 Ang N34.O and Y37.CD2 other bump:3.05107 Ang N34.C and Y37.CD2 neighbor-bump: 2.20027 Ang Y35.O and V36.CB neighbor-bump: 2.49905 Ang Y35.C and V36.CB other bump:1.97978 Ang A26.O and D30.OD2 other bump:2.7039 Ang A26.C and D30.OD2 other bump:2.06335 Ang F19.CB and H24.NE2 other bump:2.22916 Ang F19.CG and H24.NE2 other bump:2.60075 Ang F19.CD2 and H24.NE2 other bump:2.94194 Ang F19.CD2 and H24.CE1 other bump:2.51453 Ang F19.CB and H24.CD2 other bump:2.42018 Ang I8.CG1 and E16.OE1 other bump:1.89522 Ang I8.CD1 and E16.OE1 other bump:3.0744 Ang I8.CG1 and E16.CD other bump:2.47201 Ang I8.CD1 and E16.CD other bump:3.01406 Ang I8.CG1 and E16.CG T0191 82 :KDAQLIGAVNTIKIEDGK 1dl5A 118 :RNVERLGIENVIFVCGDG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 108 :IG 1dl5A 315 :CS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 5 total=248 Number of alignments=78 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 13 :GHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 52 :GEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 131 clashes (null) has 131 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 67 residues other bump:2.88741 Ang L37.CG and L66.C other bump:1.84821 Ang L37.CD1 and L66.C other bump:3.12638 Ang L37.CD2 and L66.C other bump:1.69168 Ang L37.CD1 and L66.O other bump:2.90966 Ang L37.CG and L66.CD2 other bump:1.96333 Ang L37.CD2 and L66.CD2 other bump:2.54346 Ang N36.O and L66.CD1 other bump:1.39099 Ang L37.CB and L66.CD1 other bump:0.877304 Ang L37.CG and L66.CD1 other bump:2.34478 Ang L37.CD1 and L66.CD1 other bump:1.26848 Ang L37.CD2 and L66.CD1 other bump:2.66744 Ang N36.C and L66.CD1 other bump:2.54403 Ang L37.N and L66.CD1 other bump:2.14776 Ang L37.CA and L66.CD1 other bump:2.86835 Ang L37.CB and L66.CG other bump:1.58786 Ang L37.CG and L66.CG other bump:2.55716 Ang L37.CD1 and L66.CG other bump:0.931064 Ang L37.CD2 and L66.CG other bump:2.09646 Ang L37.CG and L66.CB other bump:2.48671 Ang L37.CD1 and L66.CB other bump:2.35977 Ang L37.CD2 and L66.CB other bump:2.28694 Ang L37.CG and L66.CA other bump:1.65424 Ang L37.CD1 and L66.CA other bump:3.02711 Ang L37.CD2 and L66.CA other bump:2.47286 Ang E61.O and Y65.CD1 other bump:2.37889 Ang P57.CA and M63.CE other bump:0.346255 Ang P57.O and M63.CE other bump:1.18355 Ang P57.C and M63.CE other bump:2.16934 Ang H58.N and M63.CE other bump:2.74892 Ang H58.CA and M63.CE other bump:2.73975 Ang P57.N and M63.CE other bump:1.54438 Ang P57.O and M63.SD other bump:2.68438 Ang P57.C and M63.SD other bump:2.65776 Ang P57.CB and M63.CG other bump:2.65885 Ang P57.CG and M63.CG other bump:2.4478 Ang P57.O and M63.CG other bump:3.01227 Ang P57.C and M63.CG other bump:3.25508 Ang E6.CD and I62.CG2 other bump:2.56697 Ang E6.OE2 and I62.CG2 other bump:1.72582 Ang P4.CD and K59.NZ other bump:2.14694 Ang P4.CG and K59.NZ other bump:1.42343 Ang P4.CD and K59.CE other bump:2.15505 Ang P4.CG and K59.CE other bump:2.89144 Ang P4.CD and K59.CD other bump:2.99319 Ang P34.CG and P57.N other bump:2.27726 Ang P34.CG and I56.C other bump:2.49857 Ang P34.CD and I56.C other bump:2.028 Ang P34.CG and I56.O other bump:1.54629 Ang P34.CD and I56.O other bump:2.87652 Ang F30.CE1 and I56.CG2 other bump:3.07801 Ang F30.CZ and I56.CG2 other bump:2.92363 Ang P34.CG and I56.CA other bump:2.60645 Ang P34.CG and I56.N other bump:3.06021 Ang P34.CG and T55.C other bump:2.27434 Ang V40.CG2 and T55.OG1 other bump:2.87399 Ang P34.CA and T55.CG2 other bump:2.26825 Ang P34.CB and T55.CG2 other bump:2.36814 Ang P34.CG and T55.CG2 other bump:3.04294 Ang D31.OD2 and T55.CG2 other bump:2.94302 Ang F52.CZ and V54.CG2 other bump:2.88874 Ang F52.CD2 and V54.CG2 other bump:1.99187 Ang F52.CE2 and V54.CG2 other bump:2.71235 Ang A44.CA and N53.ND2 other bump:2.48756 Ang Y27.O and L47.CD2 other bump:2.79002 Ang L23.CD1 and L47.CD1 other bump:2.66508 Ang D31.OD2 and V40.CG2 other bump:2.62382 Ang F18.CG and Y39.OH other bump:1.76498 Ang F18.CD1 and Y39.OH other bump:1.32034 Ang F18.CE1 and Y39.OH other bump:2.79851 Ang F18.CE2 and Y39.OH other bump:2.02665 Ang F18.CZ and Y39.OH other bump:2.9775 Ang H14.ND1 and Y39.CZ other bump:1.8034 Ang F18.CE1 and Y39.CZ other bump:2.75713 Ang F18.CE2 and Y39.CZ other bump:1.70492 Ang F18.CZ and Y39.CZ other bump:2.15623 Ang F18.CE1 and Y39.CE2 other bump:2.15759 Ang F18.CZ and Y39.CE2 other bump:2.50693 Ang H14.CB and Y39.CE1 other bump:2.6895 Ang H14.CG and Y39.CE1 other bump:2.21061 Ang H14.ND1 and Y39.CE1 other bump:3.01171 Ang F18.CE1 and Y39.CE1 other bump:2.94243 Ang F18.CE2 and Y39.CE1 other bump:2.39965 Ang F18.CZ and Y39.CE1 other bump:3.01702 Ang F18.CZ and Y39.CD2 other bump:2.01884 Ang H14.ND1 and Y39.CD1 neighbor-bump: 2.6735 Ang N36.O and L37.CD1 neighbor-bump: 2.20769 Ang N36.O and L37.CG neighbor-bump: 2.61795 Ang N36.C and L37.CG neighbor-bump: 1.82484 Ang N36.O and L37.CB neighbor-bump: 2.31819 Ang N36.C and L37.CB other bump:2.76505 Ang E6.OE1 and N36.CB other bump:2.63237 Ang E6.CD and N36.N other bump:2.27582 Ang E6.OE2 and N36.N other bump:2.98758 Ang E6.CD and E35.C other bump:2.0636 Ang E6.OE2 and E35.C other bump:2.786 Ang E6.CA and E35.OE2 other bump:2.60153 Ang E6.C and E35.OE1 other bump:1.90329 Ang E6.CA and E35.OE1 other bump:0.963982 Ang E6.CG and E35.OE1 other bump:2.26663 Ang E6.CD and E35.OE1 other bump:1.17636 Ang E6.CB and E35.OE1 other bump:2.65608 Ang E6.CA and E35.CD other bump:1.92151 Ang E6.CG and E35.CD other bump:2.87261 Ang E6.CD and E35.CD other bump:2.29419 Ang E6.CB and E35.CD other bump:2.59124 Ang E6.CG and E35.CG other bump:2.76792 Ang E6.CD and E35.CG other bump:2.20008 Ang E6.OE2 and E35.CG other bump:2.46728 Ang E6.CG and E35.CB other bump:1.96135 Ang E6.CD and E35.CB other bump:1.20791 Ang E6.OE2 and E35.CB self-bump: 1.25601 Ang E35.CA and E35.CB other bump:2.907 Ang E6.CD and E35.CA other bump:1.88673 Ang E6.OE2 and E35.CA self-bump: 1.32748 Ang P34.N and P34.CD neighbor-bump: 2.5325 Ang L33.N and P34.CD self-bump: 2.19717 Ang P34.N and P34.CG neighbor-bump: 2.53999 Ang V32.C and L33.CB neighbor-bump: 2.25913 Ang V32.O and L33.CB other bump:2.67598 Ang N24.CB and Y27.CE2 other bump:2.47929 Ang N24.O and Y27.CD2 other bump:3.05107 Ang N24.C and Y27.CD2 neighbor-bump: 2.20027 Ang Y25.O and V26.CB neighbor-bump: 2.49905 Ang Y25.C and V26.CB other bump:1.97978 Ang A16.O and D20.OD2 other bump:2.7039 Ang A16.C and D20.OD2 other bump:2.06335 Ang F9.CB and H14.NE2 other bump:2.22916 Ang F9.CG and H14.NE2 other bump:2.60075 Ang F9.CD2 and H14.NE2 other bump:2.94194 Ang F9.CD2 and H14.CE1 other bump:2.51453 Ang F9.CB and H14.CD2 T0191 81 :DKDAQLIGAVNTIKIEDGKAIG 1dl5A 117 :KRNVERLGIENVIFVCGDGYYG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=250 Number of alignments=79 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLD 1dl5A 45 :VLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK Fragment has 145 clashes (null) has 145 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 75 residues other bump:2.88741 Ang L44.CG and L73.C other bump:1.84821 Ang L44.CD1 and L73.C other bump:3.12638 Ang L44.CD2 and L73.C other bump:1.69168 Ang L44.CD1 and L73.O other bump:2.62631 Ang N43.N and L73.CD2 other bump:1.80807 Ang N43.CA and L73.CD2 other bump:3.11958 Ang N43.CB and L73.CD2 other bump:1.73488 Ang N43.O and L73.CD2 other bump:2.39583 Ang L44.CB and L73.CD2 other bump:2.05517 Ang L44.CG and L73.CD2 other bump:1.08916 Ang N43.C and L73.CD2 other bump:1.70473 Ang L44.N and L73.CD2 other bump:2.64451 Ang L44.CA and L73.CD2 other bump:2.59853 Ang E42.O and L73.CD2 other bump:2.89934 Ang E42.C and L73.CD2 other bump:1.32115 Ang E42.O and L73.CD1 other bump:2.41674 Ang E42.C and L73.CD1 other bump:3.14713 Ang N43.N and L73.CG other bump:2.62505 Ang N43.CA and L73.CG other bump:2.48792 Ang L44.CG and L73.CG other bump:2.57713 Ang N43.C and L73.CG other bump:3.01854 Ang L44.N and L73.CG other bump:1.95201 Ang E42.O and L73.CG other bump:2.84695 Ang E42.C and L73.CG other bump:2.03905 Ang L44.CG and L73.CB other bump:2.4301 Ang L44.CD1 and L73.CB other bump:2.31347 Ang L44.CD2 and L73.CB other bump:2.28694 Ang L44.CG and L73.CA other bump:1.65424 Ang L44.CD1 and L73.CA other bump:3.02711 Ang L44.CD2 and L73.CA other bump:2.47286 Ang E68.O and Y72.CD1 other bump:2.37889 Ang P64.CA and M70.CE other bump:0.346255 Ang P64.O and M70.CE other bump:1.18355 Ang P64.C and M70.CE other bump:2.16934 Ang H65.N and M70.CE other bump:2.74892 Ang H65.CA and M70.CE other bump:2.73975 Ang P64.N and M70.CE other bump:1.54438 Ang P64.O and M70.SD other bump:2.68438 Ang P64.C and M70.SD other bump:2.65776 Ang P64.CB and M70.CG other bump:2.65885 Ang P64.CG and M70.CG other bump:2.4478 Ang P64.O and M70.CG other bump:3.01227 Ang P64.C and M70.CG other bump:3.25508 Ang E13.CD and I69.CG2 other bump:2.56697 Ang E13.OE2 and I69.CG2 other bump:1.72582 Ang P11.CD and K66.NZ other bump:2.14694 Ang P11.CG and K66.NZ other bump:1.42343 Ang P11.CD and K66.CE other bump:2.15505 Ang P11.CG and K66.CE other bump:2.89144 Ang P11.CD and K66.CD other bump:2.99319 Ang P41.CG and P64.N other bump:2.27726 Ang P41.CG and I63.C other bump:2.49857 Ang P41.CD and I63.C other bump:2.028 Ang P41.CG and I63.O other bump:1.54629 Ang P41.CD and I63.O other bump:2.87652 Ang F37.CE1 and I63.CG2 other bump:3.07801 Ang F37.CZ and I63.CG2 other bump:2.92363 Ang P41.CG and I63.CA other bump:2.60645 Ang P41.CG and I63.N other bump:3.06021 Ang P41.CG and T62.C other bump:2.27434 Ang V47.CG2 and T62.OG1 other bump:2.87399 Ang P41.CA and T62.CG2 other bump:2.26825 Ang P41.CB and T62.CG2 other bump:2.36814 Ang P41.CG and T62.CG2 other bump:3.04294 Ang D38.OD2 and T62.CG2 other bump:2.94302 Ang F59.CZ and V61.CG2 other bump:2.88874 Ang F59.CD2 and V61.CG2 other bump:1.99187 Ang F59.CE2 and V61.CG2 other bump:2.71235 Ang A51.CA and N60.ND2 other bump:2.48756 Ang Y34.O and L54.CD2 other bump:2.79002 Ang L30.CD1 and L54.CD1 other bump:2.66508 Ang D38.OD2 and V47.CG2 other bump:2.62382 Ang F25.CG and Y46.OH other bump:1.76498 Ang F25.CD1 and Y46.OH other bump:1.32034 Ang F25.CE1 and Y46.OH other bump:2.79851 Ang F25.CE2 and Y46.OH other bump:2.02665 Ang F25.CZ and Y46.OH other bump:2.9775 Ang H21.ND1 and Y46.CZ other bump:1.8034 Ang F25.CE1 and Y46.CZ other bump:2.75713 Ang F25.CE2 and Y46.CZ other bump:1.70492 Ang F25.CZ and Y46.CZ other bump:2.15623 Ang F25.CE1 and Y46.CE2 other bump:2.15759 Ang F25.CZ and Y46.CE2 other bump:2.50693 Ang H21.CB and Y46.CE1 other bump:2.6895 Ang H21.CG and Y46.CE1 other bump:2.21061 Ang H21.ND1 and Y46.CE1 other bump:3.01171 Ang F25.CE1 and Y46.CE1 other bump:2.94243 Ang F25.CE2 and Y46.CE1 other bump:2.39965 Ang F25.CZ and Y46.CE1 other bump:3.01702 Ang F25.CZ and Y46.CD2 other bump:2.01884 Ang H21.ND1 and Y46.CD1 neighbor-bump: 2.6735 Ang N43.O and L44.CD1 neighbor-bump: 2.20769 Ang N43.O and L44.CG neighbor-bump: 2.61795 Ang N43.C and L44.CG neighbor-bump: 1.82484 Ang N43.O and L44.CB neighbor-bump: 2.31819 Ang N43.C and L44.CB other bump:2.52485 Ang I5.CD1 and N43.OD1 other bump:2.61465 Ang I5.CD1 and N43.CG other bump:3.09296 Ang I5.CD1 and N43.CB other bump:2.76505 Ang E13.OE1 and N43.CB other bump:2.63237 Ang E13.CD and N43.N other bump:2.27582 Ang E13.OE2 and N43.N other bump:2.98758 Ang E13.CD and E42.C other bump:2.0636 Ang E13.OE2 and E42.C other bump:2.786 Ang E13.CA and E42.OE2 other bump:2.60153 Ang E13.C and E42.OE1 other bump:1.90329 Ang E13.CA and E42.OE1 other bump:0.963982 Ang E13.CG and E42.OE1 other bump:2.26663 Ang E13.CD and E42.OE1 other bump:1.17636 Ang E13.CB and E42.OE1 other bump:2.65608 Ang E13.CA and E42.CD other bump:1.92151 Ang E13.CG and E42.CD other bump:2.87261 Ang E13.CD and E42.CD other bump:2.29419 Ang E13.CB and E42.CD other bump:2.59124 Ang E13.CG and E42.CG other bump:2.76792 Ang E13.CD and E42.CG other bump:2.20008 Ang E13.OE2 and E42.CG other bump:2.46728 Ang E13.CG and E42.CB other bump:1.96135 Ang E13.CD and E42.CB other bump:1.20791 Ang E13.OE2 and E42.CB self-bump: 1.25601 Ang E42.CA and E42.CB other bump:2.907 Ang E13.CD and E42.CA other bump:1.88673 Ang E13.OE2 and E42.CA self-bump: 1.32748 Ang P41.N and P41.CD neighbor-bump: 2.5325 Ang L40.N and P41.CD self-bump: 2.19717 Ang P41.N and P41.CG neighbor-bump: 2.53999 Ang V39.C and L40.CB neighbor-bump: 2.25913 Ang V39.O and L40.CB other bump:2.67598 Ang N31.CB and Y34.CE2 other bump:2.47929 Ang N31.O and Y34.CD2 other bump:3.05107 Ang N31.C and Y34.CD2 neighbor-bump: 2.20027 Ang Y32.O and V33.CB neighbor-bump: 2.49905 Ang Y32.C and V33.CB other bump:1.97978 Ang A23.O and D27.OD2 other bump:2.7039 Ang A23.C and D27.OD2 other bump:2.06335 Ang F16.CB and H21.NE2 other bump:2.22916 Ang F16.CG and H21.NE2 other bump:2.60075 Ang F16.CD2 and H21.NE2 other bump:2.94194 Ang F16.CD2 and H21.CE1 other bump:2.51453 Ang F16.CB and H21.CD2 other bump:2.42018 Ang I5.CG1 and E13.OE1 other bump:1.89522 Ang I5.CD1 and E13.OE1 other bump:3.0744 Ang I5.CG1 and E13.CD other bump:2.47201 Ang I5.CD1 and E13.CD other bump:3.01406 Ang I5.CG1 and E13.CG T0191 82 :KDAQLIGAVNTIKIEDGK 1dl5A 118 :RNVERLGIENVIFVCGDG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues Number of specific fragments= 2 total=252 Number of alignments=80 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 2 :INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 41 :YEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 143 clashes (null) has 143 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L48.CG and L77.C other bump:1.84821 Ang L48.CD1 and L77.C other bump:3.12638 Ang L48.CD2 and L77.C other bump:1.69168 Ang L48.CD1 and L77.O other bump:2.90966 Ang L48.CG and L77.CD2 other bump:1.96333 Ang L48.CD2 and L77.CD2 other bump:2.54346 Ang N47.O and L77.CD1 other bump:1.39099 Ang L48.CB and L77.CD1 other bump:0.877304 Ang L48.CG and L77.CD1 other bump:2.34478 Ang L48.CD1 and L77.CD1 other bump:1.26848 Ang L48.CD2 and L77.CD1 other bump:2.66744 Ang N47.C and L77.CD1 other bump:2.54403 Ang L48.N and L77.CD1 other bump:2.14776 Ang L48.CA and L77.CD1 other bump:2.86835 Ang L48.CB and L77.CG other bump:1.58786 Ang L48.CG and L77.CG other bump:2.55716 Ang L48.CD1 and L77.CG other bump:0.931064 Ang L48.CD2 and L77.CG other bump:2.09646 Ang L48.CG and L77.CB other bump:2.48671 Ang L48.CD1 and L77.CB other bump:2.35977 Ang L48.CD2 and L77.CB other bump:2.28694 Ang L48.CG and L77.CA other bump:1.65424 Ang L48.CD1 and L77.CA other bump:3.02711 Ang L48.CD2 and L77.CA other bump:2.47286 Ang E72.O and Y76.CD1 other bump:2.37889 Ang P68.CA and M74.CE other bump:0.346255 Ang P68.O and M74.CE other bump:1.18355 Ang P68.C and M74.CE other bump:2.16934 Ang H69.N and M74.CE other bump:2.74892 Ang H69.CA and M74.CE other bump:2.73975 Ang P68.N and M74.CE other bump:1.54438 Ang P68.O and M74.SD other bump:2.68438 Ang P68.C and M74.SD other bump:2.65776 Ang P68.CB and M74.CG other bump:2.65885 Ang P68.CG and M74.CG other bump:2.4478 Ang P68.O and M74.CG other bump:3.01227 Ang P68.C and M74.CG other bump:3.25508 Ang E17.CD and I73.CG2 other bump:2.56697 Ang E17.OE2 and I73.CG2 other bump:1.72582 Ang P15.CD and K70.NZ other bump:2.14694 Ang P15.CG and K70.NZ other bump:1.42343 Ang P15.CD and K70.CE other bump:2.15505 Ang P15.CG and K70.CE other bump:2.89144 Ang P15.CD and K70.CD other bump:2.99319 Ang P45.CG and P68.N other bump:2.27726 Ang P45.CG and I67.C other bump:2.49857 Ang P45.CD and I67.C other bump:2.028 Ang P45.CG and I67.O other bump:1.54629 Ang P45.CD and I67.O other bump:2.87652 Ang F41.CE1 and I67.CG2 other bump:3.07801 Ang F41.CZ and I67.CG2 other bump:2.92363 Ang P45.CG and I67.CA other bump:2.60645 Ang P45.CG and I67.N other bump:3.06021 Ang P45.CG and T66.C other bump:2.27434 Ang V51.CG2 and T66.OG1 other bump:2.87399 Ang P45.CA and T66.CG2 other bump:2.26825 Ang P45.CB and T66.CG2 other bump:2.36814 Ang P45.CG and T66.CG2 other bump:3.04294 Ang D42.OD2 and T66.CG2 other bump:2.94302 Ang F63.CZ and V65.CG2 other bump:2.88874 Ang F63.CD2 and V65.CG2 other bump:1.99187 Ang F63.CE2 and V65.CG2 other bump:2.71235 Ang A55.CA and N64.ND2 other bump:2.48756 Ang Y38.O and L58.CD2 other bump:2.79002 Ang L34.CD1 and L58.CD1 other bump:2.66508 Ang D42.OD2 and V51.CG2 other bump:2.62382 Ang F29.CG and Y50.OH other bump:1.76498 Ang F29.CD1 and Y50.OH other bump:1.32034 Ang F29.CE1 and Y50.OH other bump:2.79851 Ang F29.CE2 and Y50.OH other bump:2.02665 Ang F29.CZ and Y50.OH other bump:2.9775 Ang H25.ND1 and Y50.CZ other bump:1.8034 Ang F29.CE1 and Y50.CZ other bump:2.75713 Ang F29.CE2 and Y50.CZ other bump:1.70492 Ang F29.CZ and Y50.CZ other bump:2.15623 Ang F29.CE1 and Y50.CE2 other bump:2.15759 Ang F29.CZ and Y50.CE2 other bump:2.50693 Ang H25.CB and Y50.CE1 other bump:2.6895 Ang H25.CG and Y50.CE1 other bump:2.21061 Ang H25.ND1 and Y50.CE1 other bump:3.01171 Ang F29.CE1 and Y50.CE1 other bump:2.94243 Ang F29.CE2 and Y50.CE1 other bump:2.39965 Ang F29.CZ and Y50.CE1 other bump:3.01702 Ang F29.CZ and Y50.CD2 other bump:2.01884 Ang H25.ND1 and Y50.CD1 neighbor-bump: 2.6735 Ang N47.O and L48.CD1 neighbor-bump: 2.20769 Ang N47.O and L48.CG neighbor-bump: 2.61795 Ang N47.C and L48.CG neighbor-bump: 1.82484 Ang N47.O and L48.CB neighbor-bump: 2.31819 Ang N47.C and L48.CB other bump:2.52485 Ang I9.CD1 and N47.OD1 other bump:2.61465 Ang I9.CD1 and N47.CG other bump:3.09296 Ang I9.CD1 and N47.CB other bump:2.76505 Ang E17.OE1 and N47.CB other bump:2.63237 Ang E17.CD and N47.N other bump:2.27582 Ang E17.OE2 and N47.N other bump:2.98758 Ang E17.CD and E46.C other bump:2.0636 Ang E17.OE2 and E46.C other bump:2.786 Ang E17.CA and E46.OE2 other bump:2.60153 Ang E17.C and E46.OE1 other bump:1.90329 Ang E17.CA and E46.OE1 other bump:0.963982 Ang E17.CG and E46.OE1 other bump:2.26663 Ang E17.CD and E46.OE1 other bump:1.17636 Ang E17.CB and E46.OE1 other bump:2.65608 Ang E17.CA and E46.CD other bump:1.92151 Ang E17.CG and E46.CD other bump:2.87261 Ang E17.CD and E46.CD other bump:2.29419 Ang E17.CB and E46.CD other bump:2.59124 Ang E17.CG and E46.CG other bump:2.76792 Ang E17.CD and E46.CG other bump:2.20008 Ang E17.OE2 and E46.CG other bump:2.46728 Ang E17.CG and E46.CB other bump:1.96135 Ang E17.CD and E46.CB other bump:1.20791 Ang E17.OE2 and E46.CB self-bump: 1.25601 Ang E46.CA and E46.CB other bump:2.907 Ang E17.CD and E46.CA other bump:1.88673 Ang E17.OE2 and E46.CA self-bump: 1.32748 Ang P45.N and P45.CD neighbor-bump: 2.5325 Ang L44.N and P45.CD self-bump: 2.19717 Ang P45.N and P45.CG neighbor-bump: 2.53999 Ang V43.C and L44.CB neighbor-bump: 2.25913 Ang V43.O and L44.CB other bump:2.67598 Ang N35.CB and Y38.CE2 other bump:2.47929 Ang N35.O and Y38.CD2 other bump:3.05107 Ang N35.C and Y38.CD2 neighbor-bump: 2.20027 Ang Y36.O and V37.CB neighbor-bump: 2.49905 Ang Y36.C and V37.CB other bump:1.97978 Ang A27.O and D31.OD2 other bump:2.7039 Ang A27.C and D31.OD2 other bump:2.06335 Ang F20.CB and H25.NE2 other bump:2.22916 Ang F20.CG and H25.NE2 other bump:2.60075 Ang F20.CD2 and H25.NE2 other bump:2.94194 Ang F20.CD2 and H25.CE1 other bump:2.51453 Ang F20.CB and H25.CD2 other bump:2.42018 Ang I9.CG1 and E17.OE1 other bump:1.89522 Ang I9.CD1 and E17.OE1 other bump:3.0744 Ang I9.CG1 and E17.CD other bump:2.47201 Ang I9.CD1 and E17.CD other bump:3.01406 Ang I9.CG1 and E17.CG other bump:2.06622 Ang G1.O and K7.NZ other bump:2.87276 Ang G1.C and K7.NZ other bump:2.43982 Ang G1.O and K7.CE other bump:3.09508 Ang G1.C and K7.CE T0191 81 :DKDAQLIGAVNTIKI 1dl5A 117 :KRNVERLGIENVIFV Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 96 :EDGK 1dl5A 133 :GDGY Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues neighbor-bump: 2.33088 Ang G1.O and E2.CG T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues Number of specific fragments= 5 total=257 Number of alignments=81 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 1 :M 1dl5A 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 2 :INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 41 :YEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 143 clashes (null) has 143 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 78 residues other bump:2.88741 Ang L48.CG and L77.C other bump:1.84821 Ang L48.CD1 and L77.C other bump:3.12638 Ang L48.CD2 and L77.C other bump:1.69168 Ang L48.CD1 and L77.O other bump:2.90966 Ang L48.CG and L77.CD2 other bump:1.96333 Ang L48.CD2 and L77.CD2 other bump:2.54346 Ang N47.O and L77.CD1 other bump:1.39099 Ang L48.CB and L77.CD1 other bump:0.877304 Ang L48.CG and L77.CD1 other bump:2.34478 Ang L48.CD1 and L77.CD1 other bump:1.26848 Ang L48.CD2 and L77.CD1 other bump:2.66744 Ang N47.C and L77.CD1 other bump:2.54403 Ang L48.N and L77.CD1 other bump:2.14776 Ang L48.CA and L77.CD1 other bump:2.86835 Ang L48.CB and L77.CG other bump:1.58786 Ang L48.CG and L77.CG other bump:2.55716 Ang L48.CD1 and L77.CG other bump:0.931064 Ang L48.CD2 and L77.CG other bump:2.09646 Ang L48.CG and L77.CB other bump:2.48671 Ang L48.CD1 and L77.CB other bump:2.35977 Ang L48.CD2 and L77.CB other bump:2.28694 Ang L48.CG and L77.CA other bump:1.65424 Ang L48.CD1 and L77.CA other bump:3.02711 Ang L48.CD2 and L77.CA other bump:2.47286 Ang E72.O and Y76.CD1 other bump:2.37889 Ang P68.CA and M74.CE other bump:0.346255 Ang P68.O and M74.CE other bump:1.18355 Ang P68.C and M74.CE other bump:2.16934 Ang H69.N and M74.CE other bump:2.74892 Ang H69.CA and M74.CE other bump:2.73975 Ang P68.N and M74.CE other bump:1.54438 Ang P68.O and M74.SD other bump:2.68438 Ang P68.C and M74.SD other bump:2.65776 Ang P68.CB and M74.CG other bump:2.65885 Ang P68.CG and M74.CG other bump:2.4478 Ang P68.O and M74.CG other bump:3.01227 Ang P68.C and M74.CG other bump:3.25508 Ang E17.CD and I73.CG2 other bump:2.56697 Ang E17.OE2 and I73.CG2 other bump:1.72582 Ang P15.CD and K70.NZ other bump:2.14694 Ang P15.CG and K70.NZ other bump:1.42343 Ang P15.CD and K70.CE other bump:2.15505 Ang P15.CG and K70.CE other bump:2.89144 Ang P15.CD and K70.CD other bump:2.99319 Ang P45.CG and P68.N other bump:2.27726 Ang P45.CG and I67.C other bump:2.49857 Ang P45.CD and I67.C other bump:2.028 Ang P45.CG and I67.O other bump:1.54629 Ang P45.CD and I67.O other bump:2.87652 Ang F41.CE1 and I67.CG2 other bump:3.07801 Ang F41.CZ and I67.CG2 other bump:2.92363 Ang P45.CG and I67.CA other bump:2.60645 Ang P45.CG and I67.N other bump:3.06021 Ang P45.CG and T66.C other bump:2.27434 Ang V51.CG2 and T66.OG1 other bump:2.87399 Ang P45.CA and T66.CG2 other bump:2.26825 Ang P45.CB and T66.CG2 other bump:2.36814 Ang P45.CG and T66.CG2 other bump:3.04294 Ang D42.OD2 and T66.CG2 other bump:2.94302 Ang F63.CZ and V65.CG2 other bump:2.88874 Ang F63.CD2 and V65.CG2 other bump:1.99187 Ang F63.CE2 and V65.CG2 other bump:2.71235 Ang A55.CA and N64.ND2 other bump:2.48756 Ang Y38.O and L58.CD2 other bump:2.79002 Ang L34.CD1 and L58.CD1 other bump:2.66508 Ang D42.OD2 and V51.CG2 other bump:2.62382 Ang F29.CG and Y50.OH other bump:1.76498 Ang F29.CD1 and Y50.OH other bump:1.32034 Ang F29.CE1 and Y50.OH other bump:2.79851 Ang F29.CE2 and Y50.OH other bump:2.02665 Ang F29.CZ and Y50.OH other bump:2.9775 Ang H25.ND1 and Y50.CZ other bump:1.8034 Ang F29.CE1 and Y50.CZ other bump:2.75713 Ang F29.CE2 and Y50.CZ other bump:1.70492 Ang F29.CZ and Y50.CZ other bump:2.15623 Ang F29.CE1 and Y50.CE2 other bump:2.15759 Ang F29.CZ and Y50.CE2 other bump:2.50693 Ang H25.CB and Y50.CE1 other bump:2.6895 Ang H25.CG and Y50.CE1 other bump:2.21061 Ang H25.ND1 and Y50.CE1 other bump:3.01171 Ang F29.CE1 and Y50.CE1 other bump:2.94243 Ang F29.CE2 and Y50.CE1 other bump:2.39965 Ang F29.CZ and Y50.CE1 other bump:3.01702 Ang F29.CZ and Y50.CD2 other bump:2.01884 Ang H25.ND1 and Y50.CD1 neighbor-bump: 2.6735 Ang N47.O and L48.CD1 neighbor-bump: 2.20769 Ang N47.O and L48.CG neighbor-bump: 2.61795 Ang N47.C and L48.CG neighbor-bump: 1.82484 Ang N47.O and L48.CB neighbor-bump: 2.31819 Ang N47.C and L48.CB other bump:2.52485 Ang I9.CD1 and N47.OD1 other bump:2.61465 Ang I9.CD1 and N47.CG other bump:3.09296 Ang I9.CD1 and N47.CB other bump:2.76505 Ang E17.OE1 and N47.CB other bump:2.63237 Ang E17.CD and N47.N other bump:2.27582 Ang E17.OE2 and N47.N other bump:2.98758 Ang E17.CD and E46.C other bump:2.0636 Ang E17.OE2 and E46.C other bump:2.786 Ang E17.CA and E46.OE2 other bump:2.60153 Ang E17.C and E46.OE1 other bump:1.90329 Ang E17.CA and E46.OE1 other bump:0.963982 Ang E17.CG and E46.OE1 other bump:2.26663 Ang E17.CD and E46.OE1 other bump:1.17636 Ang E17.CB and E46.OE1 other bump:2.65608 Ang E17.CA and E46.CD other bump:1.92151 Ang E17.CG and E46.CD other bump:2.87261 Ang E17.CD and E46.CD other bump:2.29419 Ang E17.CB and E46.CD other bump:2.59124 Ang E17.CG and E46.CG other bump:2.76792 Ang E17.CD and E46.CG other bump:2.20008 Ang E17.OE2 and E46.CG other bump:2.46728 Ang E17.CG and E46.CB other bump:1.96135 Ang E17.CD and E46.CB other bump:1.20791 Ang E17.OE2 and E46.CB self-bump: 1.25601 Ang E46.CA and E46.CB other bump:2.907 Ang E17.CD and E46.CA other bump:1.88673 Ang E17.OE2 and E46.CA self-bump: 1.32748 Ang P45.N and P45.CD neighbor-bump: 2.5325 Ang L44.N and P45.CD self-bump: 2.19717 Ang P45.N and P45.CG neighbor-bump: 2.53999 Ang V43.C and L44.CB neighbor-bump: 2.25913 Ang V43.O and L44.CB other bump:2.67598 Ang N35.CB and Y38.CE2 other bump:2.47929 Ang N35.O and Y38.CD2 other bump:3.05107 Ang N35.C and Y38.CD2 neighbor-bump: 2.20027 Ang Y36.O and V37.CB neighbor-bump: 2.49905 Ang Y36.C and V37.CB other bump:1.97978 Ang A27.O and D31.OD2 other bump:2.7039 Ang A27.C and D31.OD2 other bump:2.06335 Ang F20.CB and H25.NE2 other bump:2.22916 Ang F20.CG and H25.NE2 other bump:2.60075 Ang F20.CD2 and H25.NE2 other bump:2.94194 Ang F20.CD2 and H25.CE1 other bump:2.51453 Ang F20.CB and H25.CD2 other bump:2.42018 Ang I9.CG1 and E17.OE1 other bump:1.89522 Ang I9.CD1 and E17.OE1 other bump:3.0744 Ang I9.CG1 and E17.CD other bump:2.47201 Ang I9.CD1 and E17.CD other bump:3.01406 Ang I9.CG1 and E17.CG other bump:2.06622 Ang G1.O and K7.NZ other bump:2.87276 Ang G1.C and K7.NZ other bump:2.43982 Ang G1.O and K7.CE other bump:3.09508 Ang G1.C and K7.CE T0191 81 :DKDAQLIGAVNTIKI 1dl5A 117 :KRNVERLGIENVIFV Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB T0191 96 :EDG 1dl5A 133 :GDG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues neighbor-bump: 2.33088 Ang G1.O and E2.CG T0191 100 :AIGYNT 1dl5A 304 :HVGYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 108 :IG 1dl5A 315 :CS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 6 total=263 Number of alignments=82 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 13 :GHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDE 1dl5A 52 :GEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR Fragment has 137 clashes (null) has 137 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 69 residues other bump:2.88741 Ang L37.CG and L66.C other bump:1.84821 Ang L37.CD1 and L66.C other bump:3.12638 Ang L37.CD2 and L66.C other bump:1.69168 Ang L37.CD1 and L66.O other bump:1.80807 Ang N36.CA and L66.CD2 other bump:3.11958 Ang N36.CB and L66.CD2 other bump:2.62631 Ang N36.N and L66.CD2 other bump:1.73488 Ang N36.O and L66.CD2 other bump:1.08916 Ang N36.C and L66.CD2 other bump:2.39583 Ang L37.CB and L66.CD2 other bump:2.05517 Ang L37.CG and L66.CD2 other bump:1.70473 Ang L37.N and L66.CD2 other bump:2.64451 Ang L37.CA and L66.CD2 other bump:2.59853 Ang E35.O and L66.CD2 other bump:2.89934 Ang E35.C and L66.CD2 other bump:1.32115 Ang E35.O and L66.CD1 other bump:2.41674 Ang E35.C and L66.CD1 other bump:2.62505 Ang N36.CA and L66.CG other bump:3.14713 Ang N36.N and L66.CG other bump:2.57713 Ang N36.C and L66.CG other bump:2.48792 Ang L37.CG and L66.CG other bump:3.01854 Ang L37.N and L66.CG other bump:1.95201 Ang E35.O and L66.CG other bump:2.84695 Ang E35.C and L66.CG other bump:2.03905 Ang L37.CG and L66.CB other bump:2.4301 Ang L37.CD1 and L66.CB other bump:2.31347 Ang L37.CD2 and L66.CB other bump:2.28694 Ang L37.CG and L66.CA other bump:1.65424 Ang L37.CD1 and L66.CA other bump:3.02711 Ang L37.CD2 and L66.CA other bump:2.47286 Ang E61.O and Y65.CD1 other bump:0.346255 Ang P57.O and M63.CE other bump:2.37889 Ang P57.CA and M63.CE other bump:1.18355 Ang P57.C and M63.CE other bump:2.16934 Ang H58.N and M63.CE other bump:2.74892 Ang H58.CA and M63.CE other bump:2.73975 Ang P57.N and M63.CE other bump:1.54438 Ang P57.O and M63.SD other bump:2.68438 Ang P57.C and M63.SD other bump:2.4478 Ang P57.O and M63.CG other bump:2.65776 Ang P57.CB and M63.CG other bump:2.65885 Ang P57.CG and M63.CG other bump:3.01227 Ang P57.C and M63.CG other bump:3.25508 Ang E6.CD and I62.CG2 other bump:2.56697 Ang E6.OE2 and I62.CG2 other bump:2.14694 Ang P4.CG and K59.NZ other bump:1.72582 Ang P4.CD and K59.NZ other bump:2.15505 Ang P4.CG and K59.CE other bump:1.42343 Ang P4.CD and K59.CE other bump:2.89144 Ang P4.CD and K59.CD other bump:2.99319 Ang P34.CG and P57.N other bump:2.27726 Ang P34.CG and I56.C other bump:2.49857 Ang P34.CD and I56.C other bump:2.028 Ang P34.CG and I56.O other bump:1.54629 Ang P34.CD and I56.O other bump:2.87652 Ang F30.CE1 and I56.CG2 other bump:3.07801 Ang F30.CZ and I56.CG2 other bump:2.92363 Ang P34.CG and I56.CA other bump:2.60645 Ang P34.CG and I56.N other bump:3.06021 Ang P34.CG and T55.C other bump:2.27434 Ang V40.CG2 and T55.OG1 other bump:2.87399 Ang P34.CA and T55.CG2 other bump:2.26825 Ang P34.CB and T55.CG2 other bump:2.36814 Ang P34.CG and T55.CG2 other bump:3.04294 Ang D31.OD2 and T55.CG2 other bump:1.99187 Ang F52.CE2 and V54.CG2 other bump:2.94302 Ang F52.CZ and V54.CG2 other bump:2.88874 Ang F52.CD2 and V54.CG2 other bump:2.71235 Ang A44.CA and N53.ND2 other bump:2.48756 Ang Y27.O and L47.CD2 other bump:2.79002 Ang L23.CD1 and L47.CD1 other bump:2.66508 Ang D31.OD2 and V40.CG2 other bump:2.62382 Ang F18.CG and Y39.OH other bump:1.76498 Ang F18.CD1 and Y39.OH other bump:1.32034 Ang F18.CE1 and Y39.OH other bump:2.79851 Ang F18.CE2 and Y39.OH other bump:2.02665 Ang F18.CZ and Y39.OH other bump:2.9775 Ang H14.ND1 and Y39.CZ other bump:1.8034 Ang F18.CE1 and Y39.CZ other bump:2.75713 Ang F18.CE2 and Y39.CZ other bump:1.70492 Ang F18.CZ and Y39.CZ other bump:2.15623 Ang F18.CE1 and Y39.CE2 other bump:2.15759 Ang F18.CZ and Y39.CE2 other bump:2.50693 Ang H14.CB and Y39.CE1 other bump:2.6895 Ang H14.CG and Y39.CE1 other bump:2.21061 Ang H14.ND1 and Y39.CE1 other bump:3.01171 Ang F18.CE1 and Y39.CE1 other bump:2.94243 Ang F18.CE2 and Y39.CE1 other bump:2.39965 Ang F18.CZ and Y39.CE1 other bump:3.01702 Ang F18.CZ and Y39.CD2 other bump:2.01884 Ang H14.ND1 and Y39.CD1 neighbor-bump: 2.6735 Ang N36.O and L37.CD1 neighbor-bump: 2.20769 Ang N36.O and L37.CG neighbor-bump: 2.61795 Ang N36.C and L37.CG neighbor-bump: 1.82484 Ang N36.O and L37.CB neighbor-bump: 2.31819 Ang N36.C and L37.CB other bump:2.76505 Ang E6.OE1 and N36.CB other bump:2.63237 Ang E6.CD and N36.N other bump:2.27582 Ang E6.OE2 and N36.N other bump:2.98758 Ang E6.CD and E35.C other bump:2.0636 Ang E6.OE2 and E35.C other bump:2.786 Ang E6.CA and E35.OE2 other bump:1.90329 Ang E6.CA and E35.OE1 other bump:2.60153 Ang E6.C and E35.OE1 other bump:0.963982 Ang E6.CG and E35.OE1 other bump:2.26663 Ang E6.CD and E35.OE1 other bump:1.17636 Ang E6.CB and E35.OE1 other bump:2.65608 Ang E6.CA and E35.CD other bump:1.92151 Ang E6.CG and E35.CD other bump:2.87261 Ang E6.CD and E35.CD other bump:2.29419 Ang E6.CB and E35.CD other bump:2.59124 Ang E6.CG and E35.CG other bump:2.76792 Ang E6.CD and E35.CG other bump:2.20008 Ang E6.OE2 and E35.CG other bump:2.46728 Ang E6.CG and E35.CB other bump:1.96135 Ang E6.CD and E35.CB other bump:1.20791 Ang E6.OE2 and E35.CB self-bump: 1.25601 Ang E35.CA and E35.CB other bump:2.907 Ang E6.CD and E35.CA other bump:1.88673 Ang E6.OE2 and E35.CA self-bump: 1.32748 Ang P34.N and P34.CD neighbor-bump: 2.5325 Ang L33.N and P34.CD self-bump: 2.19717 Ang P34.N and P34.CG neighbor-bump: 2.25913 Ang V32.O and L33.CB neighbor-bump: 2.53999 Ang V32.C and L33.CB other bump:2.67598 Ang N24.CB and Y27.CE2 other bump:2.47929 Ang N24.O and Y27.CD2 other bump:3.05107 Ang N24.C and Y27.CD2 neighbor-bump: 2.20027 Ang Y25.O and V26.CB neighbor-bump: 2.49905 Ang Y25.C and V26.CB other bump:1.97978 Ang A16.O and D20.OD2 other bump:2.7039 Ang A16.C and D20.OD2 other bump:2.06335 Ang F9.CB and H14.NE2 other bump:2.22916 Ang F9.CG and H14.NE2 other bump:2.60075 Ang F9.CD2 and H14.NE2 other bump:2.94194 Ang F9.CD2 and H14.CE1 other bump:2.51453 Ang F9.CB and H14.CD2 Number of specific fragments= 1 total=264 Number of alignments=83 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 9 :IGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLD 1dl5A 48 :SYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK Fragment has 145 clashes (null) has 145 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 72 residues other bump:2.88741 Ang L41.CG and L70.C other bump:1.84821 Ang L41.CD1 and L70.C other bump:3.12638 Ang L41.CD2 and L70.C other bump:1.69168 Ang L41.CD1 and L70.O other bump:2.62631 Ang N40.N and L70.CD2 other bump:1.80807 Ang N40.CA and L70.CD2 other bump:3.11958 Ang N40.CB and L70.CD2 other bump:1.73488 Ang N40.O and L70.CD2 other bump:2.39583 Ang L41.CB and L70.CD2 other bump:2.05517 Ang L41.CG and L70.CD2 other bump:1.08916 Ang N40.C and L70.CD2 other bump:1.70473 Ang L41.N and L70.CD2 other bump:2.64451 Ang L41.CA and L70.CD2 other bump:2.59853 Ang E39.O and L70.CD2 other bump:2.89934 Ang E39.C and L70.CD2 other bump:1.32115 Ang E39.O and L70.CD1 other bump:2.41674 Ang E39.C and L70.CD1 other bump:3.14713 Ang N40.N and L70.CG other bump:2.62505 Ang N40.CA and L70.CG other bump:2.48792 Ang L41.CG and L70.CG other bump:2.57713 Ang N40.C and L70.CG other bump:3.01854 Ang L41.N and L70.CG other bump:1.95201 Ang E39.O and L70.CG other bump:2.84695 Ang E39.C and L70.CG other bump:2.03905 Ang L41.CG and L70.CB other bump:2.4301 Ang L41.CD1 and L70.CB other bump:2.31347 Ang L41.CD2 and L70.CB other bump:2.28694 Ang L41.CG and L70.CA other bump:1.65424 Ang L41.CD1 and L70.CA other bump:3.02711 Ang L41.CD2 and L70.CA other bump:2.47286 Ang E65.O and Y69.CD1 other bump:2.37889 Ang P61.CA and M67.CE other bump:0.346255 Ang P61.O and M67.CE other bump:1.18355 Ang P61.C and M67.CE other bump:2.16934 Ang H62.N and M67.CE other bump:2.74892 Ang H62.CA and M67.CE other bump:2.73975 Ang P61.N and M67.CE other bump:1.54438 Ang P61.O and M67.SD other bump:2.68438 Ang P61.C and M67.SD other bump:2.65776 Ang P61.CB and M67.CG other bump:2.65885 Ang P61.CG and M67.CG other bump:2.4478 Ang P61.O and M67.CG other bump:3.01227 Ang P61.C and M67.CG other bump:3.25508 Ang E10.CD and I66.CG2 other bump:2.56697 Ang E10.OE2 and I66.CG2 other bump:1.72582 Ang P8.CD and K63.NZ other bump:2.14694 Ang P8.CG and K63.NZ other bump:1.42343 Ang P8.CD and K63.CE other bump:2.15505 Ang P8.CG and K63.CE other bump:2.89144 Ang P8.CD and K63.CD other bump:2.99319 Ang P38.CG and P61.N other bump:2.27726 Ang P38.CG and I60.C other bump:2.49857 Ang P38.CD and I60.C other bump:2.028 Ang P38.CG and I60.O other bump:1.54629 Ang P38.CD and I60.O other bump:2.87652 Ang F34.CE1 and I60.CG2 other bump:3.07801 Ang F34.CZ and I60.CG2 other bump:2.92363 Ang P38.CG and I60.CA other bump:2.60645 Ang P38.CG and I60.N other bump:3.06021 Ang P38.CG and T59.C other bump:2.27434 Ang V44.CG2 and T59.OG1 other bump:2.87399 Ang P38.CA and T59.CG2 other bump:2.26825 Ang P38.CB and T59.CG2 other bump:2.36814 Ang P38.CG and T59.CG2 other bump:3.04294 Ang D35.OD2 and T59.CG2 other bump:2.94302 Ang F56.CZ and V58.CG2 other bump:2.88874 Ang F56.CD2 and V58.CG2 other bump:1.99187 Ang F56.CE2 and V58.CG2 other bump:2.71235 Ang A48.CA and N57.ND2 other bump:2.48756 Ang Y31.O and L51.CD2 other bump:2.79002 Ang L27.CD1 and L51.CD1 other bump:2.66508 Ang D35.OD2 and V44.CG2 other bump:2.62382 Ang F22.CG and Y43.OH other bump:1.76498 Ang F22.CD1 and Y43.OH other bump:1.32034 Ang F22.CE1 and Y43.OH other bump:2.79851 Ang F22.CE2 and Y43.OH other bump:2.02665 Ang F22.CZ and Y43.OH other bump:2.9775 Ang H18.ND1 and Y43.CZ other bump:1.8034 Ang F22.CE1 and Y43.CZ other bump:2.75713 Ang F22.CE2 and Y43.CZ other bump:1.70492 Ang F22.CZ and Y43.CZ other bump:2.15623 Ang F22.CE1 and Y43.CE2 other bump:2.15759 Ang F22.CZ and Y43.CE2 other bump:2.50693 Ang H18.CB and Y43.CE1 other bump:2.6895 Ang H18.CG and Y43.CE1 other bump:2.21061 Ang H18.ND1 and Y43.CE1 other bump:3.01171 Ang F22.CE1 and Y43.CE1 other bump:2.94243 Ang F22.CE2 and Y43.CE1 other bump:2.39965 Ang F22.CZ and Y43.CE1 other bump:3.01702 Ang F22.CZ and Y43.CD2 other bump:2.01884 Ang H18.ND1 and Y43.CD1 neighbor-bump: 2.6735 Ang N40.O and L41.CD1 neighbor-bump: 2.20769 Ang N40.O and L41.CG neighbor-bump: 2.61795 Ang N40.C and L41.CG neighbor-bump: 1.82484 Ang N40.O and L41.CB neighbor-bump: 2.31819 Ang N40.C and L41.CB other bump:2.52486 Ang I2.CD1 and N40.OD1 other bump:2.61466 Ang I2.CD1 and N40.CG other bump:3.09297 Ang I2.CD1 and N40.CB other bump:2.76505 Ang E10.OE1 and N40.CB other bump:2.63237 Ang E10.CD and N40.N other bump:2.27582 Ang E10.OE2 and N40.N other bump:2.98758 Ang E10.CD and E39.C other bump:2.0636 Ang E10.OE2 and E39.C other bump:2.786 Ang E10.CA and E39.OE2 other bump:2.60153 Ang E10.C and E39.OE1 other bump:1.90329 Ang E10.CA and E39.OE1 other bump:0.963982 Ang E10.CG and E39.OE1 other bump:2.26663 Ang E10.CD and E39.OE1 other bump:1.17636 Ang E10.CB and E39.OE1 other bump:2.65608 Ang E10.CA and E39.CD other bump:1.92151 Ang E10.CG and E39.CD other bump:2.87261 Ang E10.CD and E39.CD other bump:2.29419 Ang E10.CB and E39.CD other bump:2.59124 Ang E10.CG and E39.CG other bump:2.76792 Ang E10.CD and E39.CG other bump:2.20008 Ang E10.OE2 and E39.CG other bump:2.46728 Ang E10.CG and E39.CB other bump:1.96135 Ang E10.CD and E39.CB other bump:1.20791 Ang E10.OE2 and E39.CB self-bump: 1.25601 Ang E39.CA and E39.CB other bump:2.907 Ang E10.CD and E39.CA other bump:1.88673 Ang E10.OE2 and E39.CA self-bump: 1.32748 Ang P38.N and P38.CD neighbor-bump: 2.5325 Ang L37.N and P38.CD self-bump: 2.19717 Ang P38.N and P38.CG neighbor-bump: 2.53999 Ang V36.C and L37.CB neighbor-bump: 2.25913 Ang V36.O and L37.CB other bump:2.67598 Ang N28.CB and Y31.CE2 other bump:2.47929 Ang N28.O and Y31.CD2 other bump:3.05107 Ang N28.C and Y31.CD2 neighbor-bump: 2.20027 Ang Y29.O and V30.CB neighbor-bump: 2.49905 Ang Y29.C and V30.CB other bump:1.97978 Ang A20.O and D24.OD2 other bump:2.7039 Ang A20.C and D24.OD2 other bump:2.06335 Ang F13.CB and H18.NE2 other bump:2.22916 Ang F13.CG and H18.NE2 other bump:2.60075 Ang F13.CD2 and H18.NE2 other bump:2.94194 Ang F13.CD2 and H18.CE1 other bump:2.51453 Ang F13.CB and H18.CD2 other bump:2.42018 Ang I2.CG1 and E10.OE1 other bump:1.89522 Ang I2.CD1 and E10.OE1 other bump:3.0744 Ang I2.CG1 and E10.CD other bump:2.472 Ang I2.CD1 and E10.CD other bump:3.01406 Ang I2.CG1 and E10.CG T0191 82 :KDAQLIGAVNTI 1dl5A 118 :RNVERLGIENVI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues Number of specific fragments= 2 total=266 Number of alignments=84 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-local-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-local-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 13 :GHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 52 :GEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 131 clashes (null) has 131 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 67 residues other bump:2.88741 Ang L37.CG and L66.C other bump:1.84821 Ang L37.CD1 and L66.C other bump:3.12638 Ang L37.CD2 and L66.C other bump:1.69168 Ang L37.CD1 and L66.O other bump:2.90966 Ang L37.CG and L66.CD2 other bump:1.96333 Ang L37.CD2 and L66.CD2 other bump:2.54346 Ang N36.O and L66.CD1 other bump:1.39099 Ang L37.CB and L66.CD1 other bump:0.877304 Ang L37.CG and L66.CD1 other bump:2.34478 Ang L37.CD1 and L66.CD1 other bump:1.26848 Ang L37.CD2 and L66.CD1 other bump:2.66744 Ang N36.C and L66.CD1 other bump:2.54403 Ang L37.N and L66.CD1 other bump:2.14776 Ang L37.CA and L66.CD1 other bump:2.86835 Ang L37.CB and L66.CG other bump:1.58786 Ang L37.CG and L66.CG other bump:2.55716 Ang L37.CD1 and L66.CG other bump:0.931064 Ang L37.CD2 and L66.CG other bump:2.09646 Ang L37.CG and L66.CB other bump:2.48671 Ang L37.CD1 and L66.CB other bump:2.35977 Ang L37.CD2 and L66.CB other bump:2.28694 Ang L37.CG and L66.CA other bump:1.65424 Ang L37.CD1 and L66.CA other bump:3.02711 Ang L37.CD2 and L66.CA other bump:2.47286 Ang E61.O and Y65.CD1 other bump:2.37889 Ang P57.CA and M63.CE other bump:0.346255 Ang P57.O and M63.CE other bump:1.18355 Ang P57.C and M63.CE other bump:2.16934 Ang H58.N and M63.CE other bump:2.74892 Ang H58.CA and M63.CE other bump:2.73975 Ang P57.N and M63.CE other bump:1.54438 Ang P57.O and M63.SD other bump:2.68438 Ang P57.C and M63.SD other bump:2.65776 Ang P57.CB and M63.CG other bump:2.65885 Ang P57.CG and M63.CG other bump:2.4478 Ang P57.O and M63.CG other bump:3.01227 Ang P57.C and M63.CG other bump:3.25508 Ang E6.CD and I62.CG2 other bump:2.56697 Ang E6.OE2 and I62.CG2 other bump:1.72582 Ang P4.CD and K59.NZ other bump:2.14694 Ang P4.CG and K59.NZ other bump:1.42343 Ang P4.CD and K59.CE other bump:2.15505 Ang P4.CG and K59.CE other bump:2.89144 Ang P4.CD and K59.CD other bump:2.99319 Ang P34.CG and P57.N other bump:2.27726 Ang P34.CG and I56.C other bump:2.49857 Ang P34.CD and I56.C other bump:2.028 Ang P34.CG and I56.O other bump:1.54629 Ang P34.CD and I56.O other bump:2.87652 Ang F30.CE1 and I56.CG2 other bump:3.07801 Ang F30.CZ and I56.CG2 other bump:2.92363 Ang P34.CG and I56.CA other bump:2.60645 Ang P34.CG and I56.N other bump:3.06021 Ang P34.CG and T55.C other bump:2.27434 Ang V40.CG2 and T55.OG1 other bump:2.87399 Ang P34.CA and T55.CG2 other bump:2.26825 Ang P34.CB and T55.CG2 other bump:2.36814 Ang P34.CG and T55.CG2 other bump:3.04294 Ang D31.OD2 and T55.CG2 other bump:2.94302 Ang F52.CZ and V54.CG2 other bump:2.88874 Ang F52.CD2 and V54.CG2 other bump:1.99187 Ang F52.CE2 and V54.CG2 other bump:2.71235 Ang A44.CA and N53.ND2 other bump:2.48756 Ang Y27.O and L47.CD2 other bump:2.79002 Ang L23.CD1 and L47.CD1 other bump:2.66508 Ang D31.OD2 and V40.CG2 other bump:2.62382 Ang F18.CG and Y39.OH other bump:1.76498 Ang F18.CD1 and Y39.OH other bump:1.32034 Ang F18.CE1 and Y39.OH other bump:2.79851 Ang F18.CE2 and Y39.OH other bump:2.02665 Ang F18.CZ and Y39.OH other bump:2.9775 Ang H14.ND1 and Y39.CZ other bump:1.8034 Ang F18.CE1 and Y39.CZ other bump:2.75713 Ang F18.CE2 and Y39.CZ other bump:1.70492 Ang F18.CZ and Y39.CZ other bump:2.15623 Ang F18.CE1 and Y39.CE2 other bump:2.15759 Ang F18.CZ and Y39.CE2 other bump:2.50693 Ang H14.CB and Y39.CE1 other bump:2.6895 Ang H14.CG and Y39.CE1 other bump:2.21061 Ang H14.ND1 and Y39.CE1 other bump:3.01171 Ang F18.CE1 and Y39.CE1 other bump:2.94243 Ang F18.CE2 and Y39.CE1 other bump:2.39965 Ang F18.CZ and Y39.CE1 other bump:3.01702 Ang F18.CZ and Y39.CD2 other bump:2.01884 Ang H14.ND1 and Y39.CD1 neighbor-bump: 2.6735 Ang N36.O and L37.CD1 neighbor-bump: 2.20769 Ang N36.O and L37.CG neighbor-bump: 2.61795 Ang N36.C and L37.CG neighbor-bump: 1.82484 Ang N36.O and L37.CB neighbor-bump: 2.31819 Ang N36.C and L37.CB other bump:2.76505 Ang E6.OE1 and N36.CB other bump:2.63237 Ang E6.CD and N36.N other bump:2.27582 Ang E6.OE2 and N36.N other bump:2.98758 Ang E6.CD and E35.C other bump:2.0636 Ang E6.OE2 and E35.C other bump:2.786 Ang E6.CA and E35.OE2 other bump:2.60153 Ang E6.C and E35.OE1 other bump:1.90329 Ang E6.CA and E35.OE1 other bump:0.963982 Ang E6.CG and E35.OE1 other bump:2.26663 Ang E6.CD and E35.OE1 other bump:1.17636 Ang E6.CB and E35.OE1 other bump:2.65608 Ang E6.CA and E35.CD other bump:1.92151 Ang E6.CG and E35.CD other bump:2.87261 Ang E6.CD and E35.CD other bump:2.29419 Ang E6.CB and E35.CD other bump:2.59124 Ang E6.CG and E35.CG other bump:2.76792 Ang E6.CD and E35.CG other bump:2.20008 Ang E6.OE2 and E35.CG other bump:2.46728 Ang E6.CG and E35.CB other bump:1.96135 Ang E6.CD and E35.CB other bump:1.20791 Ang E6.OE2 and E35.CB self-bump: 1.25601 Ang E35.CA and E35.CB other bump:2.907 Ang E6.CD and E35.CA other bump:1.88673 Ang E6.OE2 and E35.CA self-bump: 1.32748 Ang P34.N and P34.CD neighbor-bump: 2.5325 Ang L33.N and P34.CD self-bump: 2.19717 Ang P34.N and P34.CG neighbor-bump: 2.53999 Ang V32.C and L33.CB neighbor-bump: 2.25913 Ang V32.O and L33.CB other bump:2.67598 Ang N24.CB and Y27.CE2 other bump:2.47929 Ang N24.O and Y27.CD2 other bump:3.05107 Ang N24.C and Y27.CD2 neighbor-bump: 2.20027 Ang Y25.O and V26.CB neighbor-bump: 2.49905 Ang Y25.C and V26.CB other bump:1.97978 Ang A16.O and D20.OD2 other bump:2.7039 Ang A16.C and D20.OD2 other bump:2.06335 Ang F9.CB and H14.NE2 other bump:2.22916 Ang F9.CG and H14.NE2 other bump:2.60075 Ang F9.CD2 and H14.NE2 other bump:2.94194 Ang F9.CD2 and H14.CE1 other bump:2.51453 Ang F9.CB and H14.CD2 T0191 81 :DKDAQLIGAVNTIKIEDGKAIG 1dl5A 117 :KRNVERLGIENVIFVCGDGYYG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=268 Number of alignments=85 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-local-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-local-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 12 :IGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 51 :DGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 131 clashes (null) has 131 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 68 residues other bump:2.88741 Ang L38.CG and L67.C other bump:1.84821 Ang L38.CD1 and L67.C other bump:3.12638 Ang L38.CD2 and L67.C other bump:1.69168 Ang L38.CD1 and L67.O other bump:2.90966 Ang L38.CG and L67.CD2 other bump:1.96333 Ang L38.CD2 and L67.CD2 other bump:2.54346 Ang N37.O and L67.CD1 other bump:1.39099 Ang L38.CB and L67.CD1 other bump:0.877304 Ang L38.CG and L67.CD1 other bump:2.34478 Ang L38.CD1 and L67.CD1 other bump:1.26848 Ang L38.CD2 and L67.CD1 other bump:2.66744 Ang N37.C and L67.CD1 other bump:2.54403 Ang L38.N and L67.CD1 other bump:2.14776 Ang L38.CA and L67.CD1 other bump:2.86835 Ang L38.CB and L67.CG other bump:1.58786 Ang L38.CG and L67.CG other bump:2.55716 Ang L38.CD1 and L67.CG other bump:0.931064 Ang L38.CD2 and L67.CG other bump:2.09646 Ang L38.CG and L67.CB other bump:2.48671 Ang L38.CD1 and L67.CB other bump:2.35977 Ang L38.CD2 and L67.CB other bump:2.28694 Ang L38.CG and L67.CA other bump:1.65424 Ang L38.CD1 and L67.CA other bump:3.02711 Ang L38.CD2 and L67.CA other bump:2.47286 Ang E62.O and Y66.CD1 other bump:2.37889 Ang P58.CA and M64.CE other bump:0.346255 Ang P58.O and M64.CE other bump:1.18355 Ang P58.C and M64.CE other bump:2.16934 Ang H59.N and M64.CE other bump:2.74892 Ang H59.CA and M64.CE other bump:2.73975 Ang P58.N and M64.CE other bump:1.54438 Ang P58.O and M64.SD other bump:2.68438 Ang P58.C and M64.SD other bump:2.65776 Ang P58.CB and M64.CG other bump:2.65885 Ang P58.CG and M64.CG other bump:2.4478 Ang P58.O and M64.CG other bump:3.01227 Ang P58.C and M64.CG other bump:3.25508 Ang E7.CD and I63.CG2 other bump:2.56697 Ang E7.OE2 and I63.CG2 other bump:1.72582 Ang P5.CD and K60.NZ other bump:2.14694 Ang P5.CG and K60.NZ other bump:1.42343 Ang P5.CD and K60.CE other bump:2.15505 Ang P5.CG and K60.CE other bump:2.89144 Ang P5.CD and K60.CD other bump:2.99319 Ang P35.CG and P58.N other bump:2.27726 Ang P35.CG and I57.C other bump:2.49857 Ang P35.CD and I57.C other bump:2.028 Ang P35.CG and I57.O other bump:1.54629 Ang P35.CD and I57.O other bump:2.87652 Ang F31.CE1 and I57.CG2 other bump:3.07801 Ang F31.CZ and I57.CG2 other bump:2.92363 Ang P35.CG and I57.CA other bump:2.60645 Ang P35.CG and I57.N other bump:3.06021 Ang P35.CG and T56.C other bump:2.27434 Ang V41.CG2 and T56.OG1 other bump:2.87399 Ang P35.CA and T56.CG2 other bump:2.26825 Ang P35.CB and T56.CG2 other bump:2.36814 Ang P35.CG and T56.CG2 other bump:3.04294 Ang D32.OD2 and T56.CG2 other bump:2.94302 Ang F53.CZ and V55.CG2 other bump:2.88874 Ang F53.CD2 and V55.CG2 other bump:1.99187 Ang F53.CE2 and V55.CG2 other bump:2.71235 Ang A45.CA and N54.ND2 other bump:2.48756 Ang Y28.O and L48.CD2 other bump:2.79002 Ang L24.CD1 and L48.CD1 other bump:2.66508 Ang D32.OD2 and V41.CG2 other bump:2.62382 Ang F19.CG and Y40.OH other bump:1.76498 Ang F19.CD1 and Y40.OH other bump:1.32034 Ang F19.CE1 and Y40.OH other bump:2.79851 Ang F19.CE2 and Y40.OH other bump:2.02665 Ang F19.CZ and Y40.OH other bump:2.9775 Ang H15.ND1 and Y40.CZ other bump:1.8034 Ang F19.CE1 and Y40.CZ other bump:2.75713 Ang F19.CE2 and Y40.CZ other bump:1.70492 Ang F19.CZ and Y40.CZ other bump:2.15623 Ang F19.CE1 and Y40.CE2 other bump:2.15759 Ang F19.CZ and Y40.CE2 other bump:2.50693 Ang H15.CB and Y40.CE1 other bump:2.6895 Ang H15.CG and Y40.CE1 other bump:2.21061 Ang H15.ND1 and Y40.CE1 other bump:3.01171 Ang F19.CE1 and Y40.CE1 other bump:2.94243 Ang F19.CE2 and Y40.CE1 other bump:2.39965 Ang F19.CZ and Y40.CE1 other bump:3.01702 Ang F19.CZ and Y40.CD2 other bump:2.01884 Ang H15.ND1 and Y40.CD1 neighbor-bump: 2.6735 Ang N37.O and L38.CD1 neighbor-bump: 2.20769 Ang N37.O and L38.CG neighbor-bump: 2.61795 Ang N37.C and L38.CG neighbor-bump: 1.82484 Ang N37.O and L38.CB neighbor-bump: 2.31819 Ang N37.C and L38.CB other bump:2.76505 Ang E7.OE1 and N37.CB other bump:2.63237 Ang E7.CD and N37.N other bump:2.27582 Ang E7.OE2 and N37.N other bump:2.98758 Ang E7.CD and E36.C other bump:2.0636 Ang E7.OE2 and E36.C other bump:2.786 Ang E7.CA and E36.OE2 other bump:2.60153 Ang E7.C and E36.OE1 other bump:1.90329 Ang E7.CA and E36.OE1 other bump:0.963982 Ang E7.CG and E36.OE1 other bump:2.26663 Ang E7.CD and E36.OE1 other bump:1.17636 Ang E7.CB and E36.OE1 other bump:2.65608 Ang E7.CA and E36.CD other bump:1.92151 Ang E7.CG and E36.CD other bump:2.87261 Ang E7.CD and E36.CD other bump:2.29419 Ang E7.CB and E36.CD other bump:2.59124 Ang E7.CG and E36.CG other bump:2.76792 Ang E7.CD and E36.CG other bump:2.20008 Ang E7.OE2 and E36.CG other bump:2.46728 Ang E7.CG and E36.CB other bump:1.96135 Ang E7.CD and E36.CB other bump:1.20791 Ang E7.OE2 and E36.CB self-bump: 1.25601 Ang E36.CA and E36.CB other bump:2.907 Ang E7.CD and E36.CA other bump:1.88673 Ang E7.OE2 and E36.CA self-bump: 1.32748 Ang P35.N and P35.CD neighbor-bump: 2.5325 Ang L34.N and P35.CD self-bump: 2.19717 Ang P35.N and P35.CG neighbor-bump: 2.53999 Ang V33.C and L34.CB neighbor-bump: 2.25913 Ang V33.O and L34.CB other bump:2.67598 Ang N25.CB and Y28.CE2 other bump:2.47929 Ang N25.O and Y28.CD2 other bump:3.05107 Ang N25.C and Y28.CD2 neighbor-bump: 2.20027 Ang Y26.O and V27.CB neighbor-bump: 2.49905 Ang Y26.C and V27.CB other bump:1.97978 Ang A17.O and D21.OD2 other bump:2.7039 Ang A17.C and D21.OD2 other bump:2.06335 Ang F10.CB and H15.NE2 other bump:2.22916 Ang F10.CG and H15.NE2 other bump:2.60075 Ang F10.CD2 and H15.NE2 other bump:2.94194 Ang F10.CD2 and H15.CE1 other bump:2.51453 Ang F10.CB and H15.CD2 T0191 81 :DKDAQLIGAVNTIKIEDGKAIG 1dl5A 117 :KRNVERLGIENVIFVCGDGYYG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=270 Number of alignments=86 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-simpleSW-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-simpleSW-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 29 :FKDKGLNYVYVAFDVLPE 1dl5A 142 :FSPYDVIFVTVGVDEVPE Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues neighbor-bump: 3.21837 Ang V16.CG1 and L17.C other bump:1.90206 Ang V12.CG1 and F14.CZ other bump:2.77214 Ang V12.CG1 and F14.CE2 other bump:2.29875 Ang V12.CG1 and F14.CE1 other bump:2.5369 Ang V12.O and F14.CE1 other bump:2.14511 Ang V10.CG1 and F14.CE1 other bump:2.44079 Ang V12.O and F14.CD1 other bump:2.46113 Ang V10.CG1 and F14.CD1 Number of specific fragments= 1 total=271 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-simpleSW-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-simpleSW-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set Number of specific fragments= 0 total=271 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-vit-adpstyle1.pw.a2m.gz # 1dl5A read from T0191-1dl5A-vit-adpstyle1.pw.a2m.gz # found chain 1dl5A in template set T0191 13 :GHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 52 :GEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 131 clashes (null) has 131 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 67 residues other bump:2.88741 Ang L37.CG and L66.C other bump:1.84821 Ang L37.CD1 and L66.C other bump:3.12638 Ang L37.CD2 and L66.C other bump:1.69168 Ang L37.CD1 and L66.O other bump:2.90966 Ang L37.CG and L66.CD2 other bump:1.96333 Ang L37.CD2 and L66.CD2 other bump:2.54346 Ang N36.O and L66.CD1 other bump:1.39099 Ang L37.CB and L66.CD1 other bump:0.877304 Ang L37.CG and L66.CD1 other bump:2.34478 Ang L37.CD1 and L66.CD1 other bump:1.26848 Ang L37.CD2 and L66.CD1 other bump:2.66744 Ang N36.C and L66.CD1 other bump:2.54403 Ang L37.N and L66.CD1 other bump:2.14776 Ang L37.CA and L66.CD1 other bump:2.86835 Ang L37.CB and L66.CG other bump:1.58786 Ang L37.CG and L66.CG other bump:2.55716 Ang L37.CD1 and L66.CG other bump:0.931064 Ang L37.CD2 and L66.CG other bump:2.09646 Ang L37.CG and L66.CB other bump:2.48671 Ang L37.CD1 and L66.CB other bump:2.35977 Ang L37.CD2 and L66.CB other bump:2.28694 Ang L37.CG and L66.CA other bump:1.65424 Ang L37.CD1 and L66.CA other bump:3.02711 Ang L37.CD2 and L66.CA other bump:2.47286 Ang E61.O and Y65.CD1 other bump:2.37889 Ang P57.CA and M63.CE other bump:0.346255 Ang P57.O and M63.CE other bump:1.18355 Ang P57.C and M63.CE other bump:2.16934 Ang H58.N and M63.CE other bump:2.74892 Ang H58.CA and M63.CE other bump:2.73975 Ang P57.N and M63.CE other bump:1.54438 Ang P57.O and M63.SD other bump:2.68438 Ang P57.C and M63.SD other bump:2.65776 Ang P57.CB and M63.CG other bump:2.65885 Ang P57.CG and M63.CG other bump:2.4478 Ang P57.O and M63.CG other bump:3.01227 Ang P57.C and M63.CG other bump:3.25508 Ang E6.CD and I62.CG2 other bump:2.56697 Ang E6.OE2 and I62.CG2 other bump:1.72582 Ang P4.CD and K59.NZ other bump:2.14694 Ang P4.CG and K59.NZ other bump:1.42343 Ang P4.CD and K59.CE other bump:2.15505 Ang P4.CG and K59.CE other bump:2.89144 Ang P4.CD and K59.CD other bump:2.99319 Ang P34.CG and P57.N other bump:2.27726 Ang P34.CG and I56.C other bump:2.49857 Ang P34.CD and I56.C other bump:2.028 Ang P34.CG and I56.O other bump:1.54629 Ang P34.CD and I56.O other bump:2.87652 Ang F30.CE1 and I56.CG2 other bump:3.07801 Ang F30.CZ and I56.CG2 other bump:2.92363 Ang P34.CG and I56.CA other bump:2.60645 Ang P34.CG and I56.N other bump:3.06021 Ang P34.CG and T55.C other bump:2.27434 Ang V40.CG2 and T55.OG1 other bump:2.87399 Ang P34.CA and T55.CG2 other bump:2.26825 Ang P34.CB and T55.CG2 other bump:2.36814 Ang P34.CG and T55.CG2 other bump:3.04294 Ang D31.OD2 and T55.CG2 other bump:2.94302 Ang F52.CZ and V54.CG2 other bump:2.88874 Ang F52.CD2 and V54.CG2 other bump:1.99187 Ang F52.CE2 and V54.CG2 other bump:2.71235 Ang A44.CA and N53.ND2 other bump:2.48756 Ang Y27.O and L47.CD2 other bump:2.79002 Ang L23.CD1 and L47.CD1 other bump:2.66508 Ang D31.OD2 and V40.CG2 other bump:2.62382 Ang F18.CG and Y39.OH other bump:1.76498 Ang F18.CD1 and Y39.OH other bump:1.32034 Ang F18.CE1 and Y39.OH other bump:2.79851 Ang F18.CE2 and Y39.OH other bump:2.02665 Ang F18.CZ and Y39.OH other bump:2.9775 Ang H14.ND1 and Y39.CZ other bump:1.8034 Ang F18.CE1 and Y39.CZ other bump:2.75713 Ang F18.CE2 and Y39.CZ other bump:1.70492 Ang F18.CZ and Y39.CZ other bump:2.15623 Ang F18.CE1 and Y39.CE2 other bump:2.15759 Ang F18.CZ and Y39.CE2 other bump:2.50693 Ang H14.CB and Y39.CE1 other bump:2.6895 Ang H14.CG and Y39.CE1 other bump:2.21061 Ang H14.ND1 and Y39.CE1 other bump:3.01171 Ang F18.CE1 and Y39.CE1 other bump:2.94243 Ang F18.CE2 and Y39.CE1 other bump:2.39965 Ang F18.CZ and Y39.CE1 other bump:3.01702 Ang F18.CZ and Y39.CD2 other bump:2.01884 Ang H14.ND1 and Y39.CD1 neighbor-bump: 2.6735 Ang N36.O and L37.CD1 neighbor-bump: 2.20769 Ang N36.O and L37.CG neighbor-bump: 2.61795 Ang N36.C and L37.CG neighbor-bump: 1.82484 Ang N36.O and L37.CB neighbor-bump: 2.31819 Ang N36.C and L37.CB other bump:2.76505 Ang E6.OE1 and N36.CB other bump:2.63237 Ang E6.CD and N36.N other bump:2.27582 Ang E6.OE2 and N36.N other bump:2.98758 Ang E6.CD and E35.C other bump:2.0636 Ang E6.OE2 and E35.C other bump:2.786 Ang E6.CA and E35.OE2 other bump:2.60153 Ang E6.C and E35.OE1 other bump:1.90329 Ang E6.CA and E35.OE1 other bump:0.963982 Ang E6.CG and E35.OE1 other bump:2.26663 Ang E6.CD and E35.OE1 other bump:1.17636 Ang E6.CB and E35.OE1 other bump:2.65608 Ang E6.CA and E35.CD other bump:1.92151 Ang E6.CG and E35.CD other bump:2.87261 Ang E6.CD and E35.CD other bump:2.29419 Ang E6.CB and E35.CD other bump:2.59124 Ang E6.CG and E35.CG other bump:2.76792 Ang E6.CD and E35.CG other bump:2.20008 Ang E6.OE2 and E35.CG other bump:2.46728 Ang E6.CG and E35.CB other bump:1.96135 Ang E6.CD and E35.CB other bump:1.20791 Ang E6.OE2 and E35.CB self-bump: 1.25601 Ang E35.CA and E35.CB other bump:2.907 Ang E6.CD and E35.CA other bump:1.88673 Ang E6.OE2 and E35.CA self-bump: 1.32748 Ang P34.N and P34.CD neighbor-bump: 2.5325 Ang L33.N and P34.CD self-bump: 2.19717 Ang P34.N and P34.CG neighbor-bump: 2.53999 Ang V32.C and L33.CB neighbor-bump: 2.25913 Ang V32.O and L33.CB other bump:2.67598 Ang N24.CB and Y27.CE2 other bump:2.47929 Ang N24.O and Y27.CD2 other bump:3.05107 Ang N24.C and Y27.CD2 neighbor-bump: 2.20027 Ang Y25.O and V26.CB neighbor-bump: 2.49905 Ang Y25.C and V26.CB other bump:1.97978 Ang A16.O and D20.OD2 other bump:2.7039 Ang A16.C and D20.OD2 other bump:2.06335 Ang F9.CB and H14.NE2 other bump:2.22916 Ang F9.CG and H14.NE2 other bump:2.60075 Ang F9.CD2 and H14.NE2 other bump:2.94194 Ang F9.CD2 and H14.CE1 other bump:2.51453 Ang F9.CB and H14.CD2 T0191 81 :DKDAQLIGAVNTIKIEDGKAIG 1dl5A 117 :KRNVERLGIENVIFVCGDGYYG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=273 Number of alignments=87 # Reading fragments from alignment file # T0191 read from T0191-1dl5A-vit-adpstyle5.pw.a2m.gz # 1dl5A read from T0191-1dl5A-vit-adpstyle5.pw.a2m.gz # found chain 1dl5A in template set T0191 12 :IGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYL 1dl5A 51 :DGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIA Fragment has 131 clashes (null) has 131 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 68 residues other bump:2.88741 Ang L38.CG and L67.C other bump:1.84821 Ang L38.CD1 and L67.C other bump:3.12638 Ang L38.CD2 and L67.C other bump:1.69168 Ang L38.CD1 and L67.O other bump:2.90966 Ang L38.CG and L67.CD2 other bump:1.96333 Ang L38.CD2 and L67.CD2 other bump:2.54346 Ang N37.O and L67.CD1 other bump:1.39099 Ang L38.CB and L67.CD1 other bump:0.877304 Ang L38.CG and L67.CD1 other bump:2.34478 Ang L38.CD1 and L67.CD1 other bump:1.26848 Ang L38.CD2 and L67.CD1 other bump:2.66744 Ang N37.C and L67.CD1 other bump:2.54403 Ang L38.N and L67.CD1 other bump:2.14776 Ang L38.CA and L67.CD1 other bump:2.86835 Ang L38.CB and L67.CG other bump:1.58786 Ang L38.CG and L67.CG other bump:2.55716 Ang L38.CD1 and L67.CG other bump:0.931064 Ang L38.CD2 and L67.CG other bump:2.09646 Ang L38.CG and L67.CB other bump:2.48671 Ang L38.CD1 and L67.CB other bump:2.35977 Ang L38.CD2 and L67.CB other bump:2.28694 Ang L38.CG and L67.CA other bump:1.65424 Ang L38.CD1 and L67.CA other bump:3.02711 Ang L38.CD2 and L67.CA other bump:2.47286 Ang E62.O and Y66.CD1 other bump:2.37889 Ang P58.CA and M64.CE other bump:0.346255 Ang P58.O and M64.CE other bump:1.18355 Ang P58.C and M64.CE other bump:2.16934 Ang H59.N and M64.CE other bump:2.74892 Ang H59.CA and M64.CE other bump:2.73975 Ang P58.N and M64.CE other bump:1.54438 Ang P58.O and M64.SD other bump:2.68438 Ang P58.C and M64.SD other bump:2.65776 Ang P58.CB and M64.CG other bump:2.65885 Ang P58.CG and M64.CG other bump:2.4478 Ang P58.O and M64.CG other bump:3.01227 Ang P58.C and M64.CG other bump:3.25508 Ang E7.CD and I63.CG2 other bump:2.56697 Ang E7.OE2 and I63.CG2 other bump:1.72582 Ang P5.CD and K60.NZ other bump:2.14694 Ang P5.CG and K60.NZ other bump:1.42343 Ang P5.CD and K60.CE other bump:2.15505 Ang P5.CG and K60.CE other bump:2.89144 Ang P5.CD and K60.CD other bump:2.99319 Ang P35.CG and P58.N other bump:2.27726 Ang P35.CG and I57.C other bump:2.49857 Ang P35.CD and I57.C other bump:2.028 Ang P35.CG and I57.O other bump:1.54629 Ang P35.CD and I57.O other bump:2.87652 Ang F31.CE1 and I57.CG2 other bump:3.07801 Ang F31.CZ and I57.CG2 other bump:2.92363 Ang P35.CG and I57.CA other bump:2.60645 Ang P35.CG and I57.N other bump:3.06021 Ang P35.CG and T56.C other bump:2.27434 Ang V41.CG2 and T56.OG1 other bump:2.87399 Ang P35.CA and T56.CG2 other bump:2.26825 Ang P35.CB and T56.CG2 other bump:2.36814 Ang P35.CG and T56.CG2 other bump:3.04294 Ang D32.OD2 and T56.CG2 other bump:2.94302 Ang F53.CZ and V55.CG2 other bump:2.88874 Ang F53.CD2 and V55.CG2 other bump:1.99187 Ang F53.CE2 and V55.CG2 other bump:2.71235 Ang A45.CA and N54.ND2 other bump:2.48756 Ang Y28.O and L48.CD2 other bump:2.79002 Ang L24.CD1 and L48.CD1 other bump:2.66508 Ang D32.OD2 and V41.CG2 other bump:2.62382 Ang F19.CG and Y40.OH other bump:1.76498 Ang F19.CD1 and Y40.OH other bump:1.32034 Ang F19.CE1 and Y40.OH other bump:2.79851 Ang F19.CE2 and Y40.OH other bump:2.02665 Ang F19.CZ and Y40.OH other bump:2.9775 Ang H15.ND1 and Y40.CZ other bump:1.8034 Ang F19.CE1 and Y40.CZ other bump:2.75713 Ang F19.CE2 and Y40.CZ other bump:1.70492 Ang F19.CZ and Y40.CZ other bump:2.15623 Ang F19.CE1 and Y40.CE2 other bump:2.15759 Ang F19.CZ and Y40.CE2 other bump:2.50693 Ang H15.CB and Y40.CE1 other bump:2.6895 Ang H15.CG and Y40.CE1 other bump:2.21061 Ang H15.ND1 and Y40.CE1 other bump:3.01171 Ang F19.CE1 and Y40.CE1 other bump:2.94243 Ang F19.CE2 and Y40.CE1 other bump:2.39965 Ang F19.CZ and Y40.CE1 other bump:3.01702 Ang F19.CZ and Y40.CD2 other bump:2.01884 Ang H15.ND1 and Y40.CD1 neighbor-bump: 2.6735 Ang N37.O and L38.CD1 neighbor-bump: 2.20769 Ang N37.O and L38.CG neighbor-bump: 2.61795 Ang N37.C and L38.CG neighbor-bump: 1.82484 Ang N37.O and L38.CB neighbor-bump: 2.31819 Ang N37.C and L38.CB other bump:2.76505 Ang E7.OE1 and N37.CB other bump:2.63237 Ang E7.CD and N37.N other bump:2.27582 Ang E7.OE2 and N37.N other bump:2.98758 Ang E7.CD and E36.C other bump:2.0636 Ang E7.OE2 and E36.C other bump:2.786 Ang E7.CA and E36.OE2 other bump:2.60153 Ang E7.C and E36.OE1 other bump:1.90329 Ang E7.CA and E36.OE1 other bump:0.963982 Ang E7.CG and E36.OE1 other bump:2.26663 Ang E7.CD and E36.OE1 other bump:1.17636 Ang E7.CB and E36.OE1 other bump:2.65608 Ang E7.CA and E36.CD other bump:1.92151 Ang E7.CG and E36.CD other bump:2.87261 Ang E7.CD and E36.CD other bump:2.29419 Ang E7.CB and E36.CD other bump:2.59124 Ang E7.CG and E36.CG other bump:2.76792 Ang E7.CD and E36.CG other bump:2.20008 Ang E7.OE2 and E36.CG other bump:2.46728 Ang E7.CG and E36.CB other bump:1.96135 Ang E7.CD and E36.CB other bump:1.20791 Ang E7.OE2 and E36.CB self-bump: 1.25601 Ang E36.CA and E36.CB other bump:2.907 Ang E7.CD and E36.CA other bump:1.88673 Ang E7.OE2 and E36.CA self-bump: 1.32748 Ang P35.N and P35.CD neighbor-bump: 2.5325 Ang L34.N and P35.CD self-bump: 2.19717 Ang P35.N and P35.CG neighbor-bump: 2.53999 Ang V33.C and L34.CB neighbor-bump: 2.25913 Ang V33.O and L34.CB other bump:2.67598 Ang N25.CB and Y28.CE2 other bump:2.47929 Ang N25.O and Y28.CD2 other bump:3.05107 Ang N25.C and Y28.CD2 neighbor-bump: 2.20027 Ang Y26.O and V27.CB neighbor-bump: 2.49905 Ang Y26.C and V27.CB other bump:1.97978 Ang A17.O and D21.OD2 other bump:2.7039 Ang A17.C and D21.OD2 other bump:2.06335 Ang F10.CB and H15.NE2 other bump:2.22916 Ang F10.CG and H15.NE2 other bump:2.60075 Ang F10.CD2 and H15.NE2 other bump:2.94194 Ang F10.CD2 and H15.CE1 other bump:2.51453 Ang F10.CB and H15.CD2 T0191 81 :DKDAQLIGAVNTIKIEDGKAIG 1dl5A 117 :KRNVERLGIENVIFVCGDGYYG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:1.71765 Ang G1.O and K15.NZ other bump:1.62045 Ang G1.C and K15.NZ other bump:2.79809 Ang G1.C and K15.CE other bump:3.14878 Ang G1.C and K15.CD other bump:2.84087 Ang D2.OD1 and K15.CD other bump:2.5915 Ang D2.OD1 and K15.CB Number of specific fragments= 2 total=275 Number of alignments=88 # command:# Prefix for input files set to 8abp/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 8abp-T0191-fssp-global-adpstyle1.pw.a2m.gz # 8abp read from 8abp-T0191-fssp-global-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 7 :KVIGLIGHPVEHSFSPIMHNAA 8abp 3 :LKLGFLVKQPEEPWFQTEWKFA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:3.38139 Ang F15.CE1 and M19.SD other bump:3.05173 Ang K2.NZ and I4.CG1 T0191 29 :FKDKGLNYVYVAFDVLPENLKYVIDGA 8abp 28 :GKDLGFEVIKIAVPDGEKTLNAIDSLA Fragment has 72 clashes (null) has 72 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.55855 Ang V12.CG2 and Y23.CE2 other bump:2.84913 Ang E19.CB and Y23.CE1 other bump:2.78033 Ang F14.CD2 and Y23.CE1 other bump:3.12134 Ang F14.CE2 and Y23.CE1 other bump:3.21127 Ang E19.C and Y23.CE1 other bump:2.1514 Ang V12.CG2 and Y23.CD2 other bump:2.47327 Ang F14.CE2 and Y23.CD2 other bump:2.72829 Ang F14.CZ and Y23.CD2 other bump:1.83984 Ang F14.CD2 and Y23.CD1 other bump:1.91548 Ang F14.CE2 and Y23.CD1 other bump:1.93601 Ang E19.O and Y23.CD1 other bump:2.73743 Ang E19.C and Y23.CD1 other bump:2.94782 Ang V12.CG2 and Y23.CG other bump:2.25822 Ang F14.CD2 and Y23.CG other bump:1.35831 Ang F14.CE2 and Y23.CG other bump:2.64927 Ang F14.CD2 and Y23.CB other bump:1.36392 Ang F14.CE2 and Y23.CB other bump:1.94687 Ang F14.CZ and Y23.CB other bump:2.81766 Ang F14.CE2 and Y23.CA other bump:2.61881 Ang F14.CG and N20.OD1 other bump:1.78557 Ang F14.CB and N20.OD1 other bump:3.00097 Ang F14.CB and N20.CG other bump:3.14467 Ang F14.CD2 and N20.CA other bump:2.96617 Ang F14.CE2 and E19.O other bump:2.46508 Ang V12.CG2 and F14.CZ other bump:2.89061 Ang V12.CB and F14.CE1 other bump:2.65639 Ang V12.CG2 and F14.CE1 other bump:2.78269 Ang Y9.CG and Y11.CZ other bump:2.21492 Ang Y9.CD1 and Y11.CZ other bump:2.71878 Ang Y9.CE1 and Y11.CZ other bump:2.64032 Ang Y9.CD1 and Y11.CE2 other bump:2.38399 Ang Y9.CE1 and Y11.CE2 other bump:3.12571 Ang Y9.CZ and Y11.CE2 other bump:2.96873 Ang Y9.CB and Y11.CE1 other bump:2.71897 Ang Y9.CG and Y11.CE1 other bump:2.02075 Ang Y9.CD1 and Y11.CE1 other bump:2.98008 Ang Y9.CE1 and Y11.CE1 other bump:2.84219 Ang Y9.CD1 and Y11.CD2 other bump:2.30145 Ang Y9.CE1 and Y11.CD2 other bump:2.28874 Ang Y9.CD1 and Y11.CD1 other bump:2.92548 Ang Y9.CE1 and Y11.CD1 other bump:2.67667 Ang Y9.CD1 and Y11.CG other bump:3.24403 Ang F2.CZ and N8.C other bump:2.90935 Ang F2.CE1 and N8.C other bump:2.29079 Ang F2.CE2 and N8.OD1 other bump:2.4927 Ang F2.CZ and N8.CB other bump:2.98964 Ang F2.CE1 and N8.CB other bump:2.60799 Ang F2.CE2 and N8.CA other bump:1.8003 Ang F2.CZ and N8.CA other bump:1.84265 Ang F2.CE1 and N8.CA other bump:2.68398 Ang F2.CD1 and N8.CA other bump:2.99994 Ang F2.CE2 and N8.N other bump:1.78669 Ang F2.CZ and N8.N other bump:0.940849 Ang F2.CE1 and N8.N other bump:2.10025 Ang F2.CD1 and N8.N other bump:2.85114 Ang F2.CE2 and L7.C other bump:1.90543 Ang F2.CZ and L7.C other bump:2.46148 Ang F2.CG and L7.C other bump:3.04973 Ang F2.CD2 and L7.C other bump:0.665013 Ang F2.CE1 and L7.C other bump:1.26346 Ang F2.CD1 and L7.C other bump:2.24654 Ang F2.CE2 and L7.O other bump:1.96424 Ang F2.CZ and L7.O other bump:2.67298 Ang F2.CB and L7.O other bump:1.38691 Ang F2.CG and L7.O other bump:2.00986 Ang F2.CD2 and L7.O other bump:1.36666 Ang F2.CE1 and L7.O other bump:0.881185 Ang F2.CD1 and L7.O other bump:2.74707 Ang F2.CD1 and L7.CD1 other bump:3.04713 Ang F2.CD1 and L7.CB other bump:2.12067 Ang F2.CE1 and L7.CA other bump:2.43275 Ang F2.CD1 and L7.CA T0191 56 :KALGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGA 8abp 57 :GAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD Fragment has 41 clashes (null) has 41 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 36 residues other bump:3.00194 Ang F9.CE1 and G34.CA other bump:2.30726 Ang F9.CE1 and G34.N other bump:3.0287 Ang F9.CZ and I33.C other bump:2.28055 Ang F9.CD1 and I33.C other bump:1.94114 Ang F9.CE1 and I33.C other bump:1.74692 Ang F9.CD1 and I33.O other bump:2.25123 Ang F9.CE1 and I33.O other bump:2.3463 Ang F9.CD2 and I33.CD1 other bump:1.37574 Ang F9.CE2 and I33.CD1 other bump:2.11002 Ang F9.CZ and I33.CD1 other bump:2.8206 Ang F9.CG and I33.CG1 other bump:2.32968 Ang F9.CD2 and I33.CG1 other bump:1.81182 Ang F9.CE2 and I33.CG1 other bump:1.88719 Ang F9.CZ and I33.CG1 other bump:2.85474 Ang F9.CD1 and I33.CG1 other bump:2.45224 Ang F9.CE1 and I33.CG1 other bump:2.85832 Ang F9.CE2 and I33.CB other bump:2.12344 Ang F9.CZ and I33.CB other bump:2.47702 Ang F9.CE1 and I33.CB other bump:3.01741 Ang F9.CZ and I33.CA other bump:2.6033 Ang F9.CE1 and I33.CA other bump:2.82765 Ang L23.CD2 and A30.CB other bump:2.9309 Ang L23.CD2 and A30.N other bump:3.0743 Ang L23.CD2 and D29.C other bump:3.05814 Ang L23.CG and K28.C other bump:2.36348 Ang L23.CG and K28.O other bump:2.5771 Ang I26.CG2 and K28.CE other bump:2.86616 Ang I26.CG2 and K28.CD other bump:2.94237 Ang I26.CG2 and K28.CG other bump:2.25309 Ang L23.CD1 and K28.CB other bump:3.08729 Ang L23.CD1 and K28.CA other bump:2.61314 Ang N10.ND2 and I19.CD1 other bump:2.18361 Ang T12.OG1 and H15.CD2 other bump:2.1765 Ang N10.OD1 and T12.C other bump:2.65787 Ang N10.CG and T12.O other bump:1.71161 Ang N10.OD1 and T12.O neighbor-bump: 2.80309 Ang V11.C and T12.CG2 neighbor-bump: 2.32733 Ang V11.O and T12.CG2 other bump:2.57525 Ang N10.OD1 and T12.CA other bump:3.17969 Ang N10.CG and T12.N other bump:2.15618 Ang N10.OD1 and T12.N T0191 90 :VNTIKI 8abp 103 :VPLVML Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 96 :EDGKAIGYNT 8abp 254 :PSPDVHGYKS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues T0191 106 :DG 8abp 273 :KD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 6 total=281 Number of alignments=89 # Reading fragments from alignment file # T0191 read from 8abp-T0191-fssp-global-adpstyle5.pw.a2m.gz # 8abp read from 8abp-T0191-fssp-global-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 7 :KVIGLIGH 8abp 3 :LKLGFLVK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:3.05173 Ang K2.NZ and I4.CG1 T0191 20 :FSPIMHNAA 8abp 16 :WFQTEWKFA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.38139 Ang F2.CE1 and M6.SD T0191 29 :FKDKGLNYVYVAFD 8abp 28 :GKDLGFEVIKIAVP Fragment has 48 clashes (null) has 48 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.46508 Ang V12.CG2 and F14.CZ other bump:2.89061 Ang V12.CB and F14.CE1 other bump:2.65639 Ang V12.CG2 and F14.CE1 other bump:2.78269 Ang Y9.CG and Y11.CZ other bump:2.21492 Ang Y9.CD1 and Y11.CZ other bump:2.71878 Ang Y9.CE1 and Y11.CZ other bump:2.64032 Ang Y9.CD1 and Y11.CE2 other bump:2.38399 Ang Y9.CE1 and Y11.CE2 other bump:3.12571 Ang Y9.CZ and Y11.CE2 other bump:2.96873 Ang Y9.CB and Y11.CE1 other bump:2.71897 Ang Y9.CG and Y11.CE1 other bump:2.02075 Ang Y9.CD1 and Y11.CE1 other bump:2.98008 Ang Y9.CE1 and Y11.CE1 other bump:2.84219 Ang Y9.CD1 and Y11.CD2 other bump:2.30145 Ang Y9.CE1 and Y11.CD2 other bump:2.28874 Ang Y9.CD1 and Y11.CD1 other bump:2.92548 Ang Y9.CE1 and Y11.CD1 other bump:2.67667 Ang Y9.CD1 and Y11.CG other bump:3.24403 Ang F2.CZ and N8.C other bump:2.90935 Ang F2.CE1 and N8.C other bump:2.29079 Ang F2.CE2 and N8.OD1 other bump:2.4927 Ang F2.CZ and N8.CB other bump:2.98964 Ang F2.CE1 and N8.CB other bump:2.60799 Ang F2.CE2 and N8.CA other bump:1.8003 Ang F2.CZ and N8.CA other bump:2.68398 Ang F2.CD1 and N8.CA other bump:1.84265 Ang F2.CE1 and N8.CA other bump:2.99994 Ang F2.CE2 and N8.N other bump:1.78669 Ang F2.CZ and N8.N other bump:2.10025 Ang F2.CD1 and N8.N other bump:0.940849 Ang F2.CE1 and N8.N other bump:3.04973 Ang F2.CD2 and L7.C other bump:2.85114 Ang F2.CE2 and L7.C other bump:1.90543 Ang F2.CZ and L7.C other bump:2.46148 Ang F2.CG and L7.C other bump:1.26346 Ang F2.CD1 and L7.C other bump:0.665013 Ang F2.CE1 and L7.C other bump:2.00986 Ang F2.CD2 and L7.O other bump:2.24654 Ang F2.CE2 and L7.O other bump:1.96424 Ang F2.CZ and L7.O other bump:2.67298 Ang F2.CB and L7.O other bump:1.38691 Ang F2.CG and L7.O other bump:0.881185 Ang F2.CD1 and L7.O other bump:1.36666 Ang F2.CE1 and L7.O other bump:2.74707 Ang F2.CD1 and L7.CD1 other bump:3.04713 Ang F2.CD1 and L7.CB other bump:2.43275 Ang F2.CD1 and L7.CA other bump:2.12067 Ang F2.CE1 and L7.CA T0191 43 :VLPENLKYVI 8abp 45 :KTLNAIDSLA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues T0191 53 :DGAKALGIVG 8abp 56 :SGAKGFVICT Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.30313 Ang A6.CB and L7.N self-bump: 2.16812 Ang A6.CB and A6.C self-bump: 1.18922 Ang A6.CA and A6.CB T0191 66 :TIPHKIEIMKYLDEIDKDAQLIGAV 8abp 67 :DPKLGSAIVAKARGYDMKVIAVDDQ Fragment has 17 clashes (null) has 17 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.95813 Ang K6.CD and G27.CA other bump:2.60844 Ang K6.CE and G27.CA other bump:2.70436 Ang I3.CD1 and V26.O other bump:2.39153 Ang I3.CG2 and V26.O other bump:2.82765 Ang L13.CD2 and A20.CB other bump:2.9309 Ang L13.CD2 and A20.N other bump:3.0743 Ang L13.CD2 and D19.C other bump:3.05814 Ang L13.CG and K18.C other bump:2.36348 Ang L13.CG and K18.O other bump:2.5771 Ang I16.CG2 and K18.CE other bump:2.86616 Ang I16.CG2 and K18.CD other bump:2.94237 Ang I16.CG2 and K18.CG other bump:2.25309 Ang L13.CD1 and K18.CB other bump:3.08729 Ang L13.CD1 and K18.CA other bump:2.18362 Ang T2.OG1 and H5.CD2 neighbor-bump: 2.8031 Ang G1.C and T2.CG2 neighbor-bump: 2.32733 Ang G1.O and T2.CG2 T0191 91 :NTIKI 8abp 104 :PLVML Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues T0191 96 :EDG 8abp 254 :PSP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues T0191 99 :KAIGYNTDGIG 8abp 262 :KSSEMLYNWVA Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues other bump:2.31783 Ang K2.CE and Y6.OH other bump:2.0421 Ang K2.NZ and Y6.OH other bump:3.05017 Ang K2.CE and Y6.CZ other bump:2.80653 Ang K2.NZ and Y6.CZ other bump:3.05594 Ang K2.CG and Y6.CE2 Number of specific fragments= 9 total=290 Number of alignments=90 # Reading fragments from alignment file # T0191 read from 8abp-T0191-local-adpstyle1.pw.a2m.gz # 8abp read from 8abp-T0191-local-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 28 :AFKDKGL 8abp 215 :ATEGQGF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 35 :NYVYVAFDVLP 8abp 225 :DIIGIGINGVD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues self-bump: 1.32592 Ang P12.N and P12.CD neighbor-bump: 2.47126 Ang L11.N and P12.CD self-bump: 2.19764 Ang P12.N and P12.CG other bump:2.86608 Ang D9.CB and P12.CG neighbor-bump: 2.28146 Ang F8.O and D9.CG T0191 46 :ENLKYVIDG 8abp 238 :SELSKAQAT Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.1432 Ang N3.CA and Y6.CE2 other bump:3.21915 Ang N3.CA and Y6.CD2 other bump:2.55968 Ang G1.O and K5.CG Number of specific fragments= 3 total=293 Number of alignments=91 # Reading fragments from alignment file # T0191 read from 8abp-T0191-local-adpstyle5.pw.a2m.gz # 8abp read from 8abp-T0191-local-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 8 :VIGLIGHPVEHSFSPIMHN 8abp 4 :KLGFLVKQPEEPWFQTEWK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:3.38139 Ang F14.CE1 and M18.SD T0191 27 :AAFKDKGLNYVYVAFD 8abp 26 :KAGKDLGFEVIKIAVP Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:2.46508 Ang V14.CG2 and F16.CZ other bump:2.89061 Ang V14.CB and F16.CE1 other bump:2.65639 Ang V14.CG2 and F16.CE1 other bump:2.78269 Ang Y11.CG and Y13.CZ other bump:2.21492 Ang Y11.CD1 and Y13.CZ other bump:2.71878 Ang Y11.CE1 and Y13.CZ other bump:2.64032 Ang Y11.CD1 and Y13.CE2 other bump:2.38399 Ang Y11.CE1 and Y13.CE2 other bump:3.12571 Ang Y11.CZ and Y13.CE2 other bump:2.96873 Ang Y11.CB and Y13.CE1 other bump:2.71897 Ang Y11.CG and Y13.CE1 other bump:2.02075 Ang Y11.CD1 and Y13.CE1 other bump:2.98008 Ang Y11.CE1 and Y13.CE1 other bump:2.84219 Ang Y11.CD1 and Y13.CD2 other bump:2.30145 Ang Y11.CE1 and Y13.CD2 other bump:2.28874 Ang Y11.CD1 and Y13.CD1 other bump:2.92548 Ang Y11.CE1 and Y13.CD1 other bump:2.67667 Ang Y11.CD1 and Y13.CG other bump:3.18917 Ang F4.CE2 and Y11.C other bump:2.71422 Ang F4.CZ and Y11.CD2 other bump:2.49561 Ang F4.CE2 and Y11.CG other bump:2.18021 Ang F4.CD2 and Y11.CB other bump:1.31813 Ang F4.CE2 and Y11.CB other bump:2.33674 Ang F4.CZ and Y11.CB other bump:2.7005 Ang F4.CD2 and Y11.CA other bump:1.71303 Ang F4.CE2 and Y11.CA other bump:2.573 Ang F4.CZ and Y11.CA other bump:2.36211 Ang F4.CD2 and Y11.N other bump:2.09734 Ang F4.CE2 and Y11.N other bump:3.10326 Ang F4.CZ and Y11.N other bump:3.05019 Ang F4.CD2 and N10.C other bump:2.82461 Ang F4.CE2 and N10.C other bump:2.64658 Ang F4.CB and L9.O other bump:3.02079 Ang F4.CZ and L9.CD1 other bump:1.76326 Ang F4.CD1 and L9.CD1 other bump:1.97337 Ang F4.CE1 and L9.CD1 T0191 44 :LPENLKYVI 8abp 121 :LYKEMQKRG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.5377 Ang V9.C and I10.CB T0191 53 :DGAKALGIVGFNVT 8abp 135 :SAVMAITANELDTA Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.00626 Ang I9.CD1 and T15.OG1 other bump:2.76827 Ang I9.CB and T15.CG2 other bump:1.38008 Ang I9.CG1 and T15.CG2 other bump:1.59587 Ang I9.CD1 and T15.CG2 other bump:2.60945 Ang I9.CG1 and T15.CB other bump:2.15151 Ang I9.CD1 and T15.CB Number of specific fragments= 4 total=297 Number of alignments=92 # Reading fragments from alignment file # T0191 read from 8abp-T0191-vit-adpstyle1.pw.a2m.gz # 8abp read from 8abp-T0191-vit-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 28 :AFKDKGL 8abp 215 :ATEGQGF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 35 :NYVYVAFDVLP 8abp 225 :DIIGIGINGVD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues self-bump: 1.32592 Ang P12.N and P12.CD neighbor-bump: 2.47126 Ang L11.N and P12.CD self-bump: 2.19764 Ang P12.N and P12.CG other bump:2.86608 Ang D9.CB and P12.CG neighbor-bump: 2.28146 Ang F8.O and D9.CG T0191 46 :ENLKYVIDG 8abp 238 :SELSKAQAT Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.1432 Ang N3.CA and Y6.CE2 other bump:3.21915 Ang N3.CA and Y6.CD2 other bump:2.55968 Ang G1.O and K5.CG Number of specific fragments= 3 total=300 Number of alignments=93 # Reading fragments from alignment file # T0191 read from 8abp-T0191-vit-adpstyle5.pw.a2m.gz # 8abp read from 8abp-T0191-vit-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 8 :VIGLIGHPVEHSFSPIMHN 8abp 4 :KLGFLVKQPEEPWFQTEWK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:3.38139 Ang F14.CE1 and M18.SD T0191 27 :AAFKDKGLNYVYVAFD 8abp 26 :KAGKDLGFEVIKIAVP Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:2.46508 Ang V14.CG2 and F16.CZ other bump:2.89061 Ang V14.CB and F16.CE1 other bump:2.65639 Ang V14.CG2 and F16.CE1 other bump:2.78269 Ang Y11.CG and Y13.CZ other bump:2.21492 Ang Y11.CD1 and Y13.CZ other bump:2.71878 Ang Y11.CE1 and Y13.CZ other bump:2.64032 Ang Y11.CD1 and Y13.CE2 other bump:2.38399 Ang Y11.CE1 and Y13.CE2 other bump:3.12571 Ang Y11.CZ and Y13.CE2 other bump:2.96873 Ang Y11.CB and Y13.CE1 other bump:2.71897 Ang Y11.CG and Y13.CE1 other bump:2.02075 Ang Y11.CD1 and Y13.CE1 other bump:2.98008 Ang Y11.CE1 and Y13.CE1 other bump:2.84219 Ang Y11.CD1 and Y13.CD2 other bump:2.30145 Ang Y11.CE1 and Y13.CD2 other bump:2.28874 Ang Y11.CD1 and Y13.CD1 other bump:2.92548 Ang Y11.CE1 and Y13.CD1 other bump:2.67667 Ang Y11.CD1 and Y13.CG other bump:3.18917 Ang F4.CE2 and Y11.C other bump:2.71422 Ang F4.CZ and Y11.CD2 other bump:2.49561 Ang F4.CE2 and Y11.CG other bump:2.18021 Ang F4.CD2 and Y11.CB other bump:1.31813 Ang F4.CE2 and Y11.CB other bump:2.33674 Ang F4.CZ and Y11.CB other bump:2.7005 Ang F4.CD2 and Y11.CA other bump:1.71303 Ang F4.CE2 and Y11.CA other bump:2.573 Ang F4.CZ and Y11.CA other bump:2.36211 Ang F4.CD2 and Y11.N other bump:2.09734 Ang F4.CE2 and Y11.N other bump:3.10326 Ang F4.CZ and Y11.N other bump:3.05019 Ang F4.CD2 and N10.C other bump:2.82461 Ang F4.CE2 and N10.C other bump:2.64658 Ang F4.CB and L9.O other bump:3.02079 Ang F4.CZ and L9.CD1 other bump:1.76326 Ang F4.CD1 and L9.CD1 other bump:1.97337 Ang F4.CE1 and L9.CD1 T0191 44 :LPENLKYVI 8abp 121 :LYKEMQKRG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.5377 Ang V9.C and I10.CB T0191 53 :DGAKALGIVGFNVT 8abp 135 :SAVMAITANELDTA Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.00626 Ang I9.CD1 and T15.OG1 other bump:2.76827 Ang I9.CB and T15.CG2 other bump:1.38008 Ang I9.CG1 and T15.CG2 other bump:1.59587 Ang I9.CD1 and T15.CG2 other bump:2.60945 Ang I9.CG1 and T15.CB other bump:2.15151 Ang I9.CD1 and T15.CB Number of specific fragments= 4 total=304 Number of alignments=94 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 8abp 3 :LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.18907 Ang V35.CG2 and F37.CZ other bump:2.9422 Ang V35.CB and F37.CE1 other bump:1.80264 Ang V35.CG2 and F37.CE1 other bump:1.77184 Ang G6.CA and Y34.OH other bump:2.56053 Ang G6.C and Y34.OH other bump:2.92897 Ang G6.N and Y34.CZ other bump:2.33569 Ang G6.CA and Y34.CZ other bump:3.08826 Ang I5.C and Y34.CE1 other bump:2.83511 Ang G6.N and Y34.CE1 other bump:2.71666 Ang G6.CA and Y34.CE1 other bump:2.4208 Ang D27.OD1 and Y34.CB other bump:2.63074 Ang D27.CB and Y32.O other bump:2.51701 Ang K26.CB and Y32.OH other bump:3.17418 Ang D27.CA and Y32.CZ other bump:2.56683 Ang D27.OD2 and Y32.CZ other bump:2.41692 Ang D27.CG and Y32.CE1 other bump:1.34273 Ang D27.OD2 and Y32.CE1 other bump:1.50163 Ang D27.OD2 and Y32.CD1 other bump:2.73754 Ang D27.OD2 and Y32.CG neighbor-bump: 2.27112 Ang L30.O and N31.CB neighbor-bump: 2.6169 Ang L30.C and N31.CB other bump:2.83215 Ang H21.CE1 and F25.CZ other bump:2.6895 Ang H21.NE2 and F25.CZ other bump:2.77221 Ang H21.CD2 and F25.CE1 other bump:2.66368 Ang H21.CE1 and F25.CE1 other bump:2.14058 Ang H21.NE2 and F25.CE1 other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79435 Ang H14.O and P18.CG other bump:2.92353 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPH 8abp 42 :DGEKTLNAIDSLAASGAKGFVICTPD Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.20284 Ang L6.CD1 and P26.CD neighbor-bump: 2.94794 Ang I25.CG1 and P26.CD other bump:2.53746 Ang L6.CD1 and P26.CG other bump:2.64379 Ang I18.CG2 and G20.O other bump:3.05624 Ang A13.CB and I18.CD1 other bump:2.48977 Ang N5.O and V9.CG2 other bump:2.8389 Ang E4.OE2 and Y8.CZ other bump:2.30477 Ang E4.OE2 and Y8.CE1 other bump:2.64155 Ang E4.O and Y8.CD1 self-bump: 1.38331 Ang P3.N and P3.CD T0191 74 :MKYLDEIDKDAQLIG 8abp 68 :PKLGSAIVAKARGYD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues T0191 90 :VNTIKIEDGK 8abp 83 :MKVIAVDDQF Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.29938 Ang K6.CE and K11.CE other bump:2.93036 Ang K6.CD and K11.CD other bump:1.47447 Ang K6.CE and K11.CD other bump:2.1259 Ang K6.NZ and K11.CD other bump:2.36023 Ang K6.CD and K11.CG other bump:1.31047 Ang K6.CE and K11.CG other bump:1.37384 Ang K6.NZ and K11.CG other bump:2.2721 Ang K6.CE and K11.CB other bump:0.968071 Ang K6.NZ and K11.CB other bump:2.14688 Ang K6.NZ and K11.CA T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 5 total=309 Number of alignments=95 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSP 8abp 3 :LKLGFLVKQPEEPWFQT Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79434 Ang H14.O and P18.CG other bump:2.92352 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIM 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPDPKLGS Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues neighbor-bump: 2.72325 Ang I30.CG2 and M31.N other bump:2.3619 Ang H26.CB and E29.OE2 other bump:2.28552 Ang H26.CA and E29.OE1 other bump:1.30524 Ang H26.O and E29.OE1 other bump:1.97864 Ang H26.C and E29.OE1 other bump:2.64681 Ang H26.CB and E29.OE1 other bump:3.04718 Ang H26.CA and E29.CD other bump:2.53966 Ang H26.O and E29.CD other bump:3.14082 Ang H26.C and E29.CD other bump:2.83555 Ang H26.CB and E29.CD other bump:2.53333 Ang I24.CD1 and E29.CB other bump:2.45805 Ang H26.CE1 and I28.CD1 other bump:2.94003 Ang H26.CE1 and I28.CG1 other bump:2.87603 Ang H26.ND1 and I28.CB other bump:2.83507 Ang H26.CE1 and I28.CB other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD T0191 79 :EIDKDAQLIGA 8abp 73 :AIVAKARGYDM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues T0191 91 :NTIKIEDGK 8abp 84 :KVIAVDDQF Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.29938 Ang K5.CE and K10.CE other bump:2.93036 Ang K5.CD and K10.CD other bump:1.47447 Ang K5.CE and K10.CD other bump:2.1259 Ang K5.NZ and K10.CD other bump:2.36023 Ang K5.CD and K10.CG other bump:1.31047 Ang K5.CE and K10.CG other bump:1.37384 Ang K5.NZ and K10.CG other bump:2.2721 Ang K5.CE and K10.CB other bump:0.968071 Ang K5.NZ and K10.CB other bump:2.14688 Ang K5.NZ and K10.CA T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 6 total=315 Number of alignments=96 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 24 :MHNAAFKDKGLNYVYVAFDV 8abp 23 :FADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.46508 Ang V17.CG2 and F19.CZ other bump:2.89061 Ang V17.CB and F19.CE1 other bump:2.65639 Ang V17.CG2 and F19.CE1 other bump:2.53841 Ang N4.N and Y16.OH other bump:2.86909 Ang H3.CB and Y16.OH other bump:2.57164 Ang H3.CD2 and Y16.OH other bump:2.66294 Ang N4.OD1 and Y16.CZ other bump:2.78269 Ang Y14.CG and Y16.CZ other bump:2.21492 Ang Y14.CD1 and Y16.CZ other bump:2.71878 Ang Y14.CE1 and Y16.CZ other bump:2.64032 Ang Y14.CD1 and Y16.CE2 other bump:2.38399 Ang Y14.CE1 and Y16.CE2 other bump:3.12571 Ang Y14.CZ and Y16.CE2 other bump:2.46254 Ang N4.OD1 and Y16.CE1 other bump:2.96873 Ang Y14.CB and Y16.CE1 other bump:2.71897 Ang Y14.CG and Y16.CE1 other bump:2.02075 Ang Y14.CD1 and Y16.CE1 other bump:2.98008 Ang Y14.CE1 and Y16.CE1 other bump:2.84219 Ang Y14.CD1 and Y16.CD2 other bump:2.30145 Ang Y14.CE1 and Y16.CD2 other bump:2.28874 Ang Y14.CD1 and Y16.CD1 other bump:2.92548 Ang Y14.CE1 and Y16.CD1 other bump:2.67667 Ang Y14.CD1 and Y16.CG other bump:3.18917 Ang F7.CE2 and Y14.C other bump:2.90845 Ang H3.CD2 and Y14.CZ other bump:2.34135 Ang H3.CG and Y14.CE2 other bump:2.10423 Ang H3.CD2 and Y14.CE2 other bump:2.25422 Ang H3.NE2 and Y14.CE2 other bump:2.58734 Ang H3.ND1 and Y14.CE2 other bump:2.55069 Ang H3.CE1 and Y14.CE2 other bump:2.71422 Ang F7.CZ and Y14.CD2 other bump:2.04448 Ang H3.CG and Y14.CD2 other bump:1.15929 Ang H3.CD2 and Y14.CD2 other bump:0.969526 Ang H3.NE2 and Y14.CD2 other bump:2.31831 Ang H3.ND1 and Y14.CD2 other bump:1.85998 Ang H3.CE1 and Y14.CD2 other bump:2.52381 Ang H3.CD2 and Y14.CD1 other bump:2.49561 Ang F7.CE2 and Y14.CG other bump:2.85885 Ang H3.CG and Y14.CG other bump:1.53125 Ang H3.CD2 and Y14.CG other bump:1.7542 Ang H3.NE2 and Y14.CG other bump:2.18021 Ang F7.CD2 and Y14.CB other bump:1.31813 Ang F7.CE2 and Y14.CB other bump:2.33674 Ang F7.CZ and Y14.CB other bump:2.35867 Ang H3.CD2 and Y14.CB other bump:2.26132 Ang H3.NE2 and Y14.CB other bump:2.7005 Ang F7.CD2 and Y14.CA other bump:1.71303 Ang F7.CE2 and Y14.CA other bump:2.573 Ang F7.CZ and Y14.CA other bump:2.36211 Ang F7.CD2 and Y14.N other bump:2.09734 Ang F7.CE2 and Y14.N other bump:3.10326 Ang F7.CZ and Y14.N other bump:3.05019 Ang F7.CD2 and N13.C other bump:2.82461 Ang F7.CE2 and N13.C other bump:2.64658 Ang F7.CB and L12.O other bump:3.02079 Ang F7.CZ and L12.CD1 other bump:1.76326 Ang F7.CD1 and L12.CD1 other bump:1.97337 Ang F7.CE1 and L12.CD1 other bump:1.8246 Ang H3.NE2 and F7.CZ other bump:2.32308 Ang H3.CE1 and F7.CZ other bump:2.88808 Ang H3.CD2 and F7.CE2 other bump:2.27832 Ang H3.NE2 and F7.CE2 other bump:2.64769 Ang H3.NE2 and F7.CE1 other bump:2.49456 Ang H3.CE1 and F7.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIP 8abp 43 :GEKTLNAIDSLAASGAKGFVICTP Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD Number of specific fragments= 2 total=317 Number of alignments=97 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPH 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPD Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD Number of specific fragments= 2 total=319 Number of alignments=98 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 8abp 3 :LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.18907 Ang V35.CG2 and F37.CZ other bump:2.9422 Ang V35.CB and F37.CE1 other bump:1.80264 Ang V35.CG2 and F37.CE1 other bump:1.77184 Ang G6.CA and Y34.OH other bump:2.56053 Ang G6.C and Y34.OH other bump:2.92897 Ang G6.N and Y34.CZ other bump:2.33569 Ang G6.CA and Y34.CZ other bump:3.08826 Ang I5.C and Y34.CE1 other bump:2.83511 Ang G6.N and Y34.CE1 other bump:2.71666 Ang G6.CA and Y34.CE1 other bump:2.4208 Ang D27.OD1 and Y34.CB other bump:2.63074 Ang D27.CB and Y32.O other bump:2.51701 Ang K26.CB and Y32.OH other bump:3.17418 Ang D27.CA and Y32.CZ other bump:2.56683 Ang D27.OD2 and Y32.CZ other bump:2.41692 Ang D27.CG and Y32.CE1 other bump:1.34273 Ang D27.OD2 and Y32.CE1 other bump:1.50163 Ang D27.OD2 and Y32.CD1 other bump:2.73754 Ang D27.OD2 and Y32.CG neighbor-bump: 2.27112 Ang L30.O and N31.CB neighbor-bump: 2.6169 Ang L30.C and N31.CB other bump:2.83215 Ang H21.CE1 and F25.CZ other bump:2.6895 Ang H21.NE2 and F25.CZ other bump:2.77221 Ang H21.CD2 and F25.CE1 other bump:2.66368 Ang H21.CE1 and F25.CE1 other bump:2.14058 Ang H21.NE2 and F25.CE1 other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79435 Ang H14.O and P18.CG other bump:2.92353 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIP 8abp 42 :DGEKTLNAIDSLAASGAKGFVICTP Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.20284 Ang L6.CD1 and P26.CD neighbor-bump: 2.94794 Ang I25.CG1 and P26.CD other bump:2.53746 Ang L6.CD1 and P26.CG other bump:2.64379 Ang I18.CG2 and G20.O other bump:3.05624 Ang A13.CB and I18.CD1 other bump:2.48977 Ang N5.O and V9.CG2 other bump:2.8389 Ang E4.OE2 and Y8.CZ other bump:2.30477 Ang E4.OE2 and Y8.CE1 other bump:2.64155 Ang E4.O and Y8.CD1 self-bump: 1.38331 Ang P3.N and P3.CD T0191 69 :HKIEIMKYLDEID 8abp 70 :LGSAIVAKARGYD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:3.08729 Ang L10.CD1 and G15.CA T0191 90 :VNTIKIEDGK 8abp 83 :MKVIAVDDQF Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.29938 Ang K6.CE and K11.CE other bump:2.93036 Ang K6.CD and K11.CD other bump:1.47447 Ang K6.CE and K11.CD other bump:2.1259 Ang K6.NZ and K11.CD other bump:2.36023 Ang K6.CD and K11.CG other bump:1.31047 Ang K6.CE and K11.CG other bump:1.37384 Ang K6.NZ and K11.CG other bump:2.2721 Ang K6.CE and K11.CB other bump:0.968071 Ang K6.NZ and K11.CB other bump:2.14688 Ang K6.NZ and K11.CA T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 5 total=324 Number of alignments=99 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSP 8abp 3 :LKLGFLVKQPEEPWFQT Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79434 Ang H14.O and P18.CG other bump:2.92352 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIP 8abp 43 :GEKTLNAIDSLAASGAKGFVICTP Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD T0191 69 :HKIEIMKYLDEID 8abp 70 :LGSAIVAKARGYD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:3.08729 Ang L10.CD1 and G15.CA T0191 90 :VNTIKIEDGK 8abp 83 :MKVIAVDDQF Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.29938 Ang K6.CE and K11.CE other bump:2.93036 Ang K6.CD and K11.CD other bump:1.47447 Ang K6.CE and K11.CD other bump:2.1259 Ang K6.NZ and K11.CD other bump:2.36023 Ang K6.CD and K11.CG other bump:1.31047 Ang K6.CE and K11.CG other bump:1.37384 Ang K6.NZ and K11.CG other bump:2.2721 Ang K6.CE and K11.CB other bump:0.968071 Ang K6.NZ and K11.CB other bump:2.14688 Ang K6.NZ and K11.CA T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 6 total=330 Number of alignments=100 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 24 :MHNAAFKDKGLNYVYVAFDV 8abp 23 :FADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.46508 Ang V17.CG2 and F19.CZ other bump:2.89061 Ang V17.CB and F19.CE1 other bump:2.65639 Ang V17.CG2 and F19.CE1 other bump:2.53841 Ang N4.N and Y16.OH other bump:2.86909 Ang H3.CB and Y16.OH other bump:2.57164 Ang H3.CD2 and Y16.OH other bump:2.66294 Ang N4.OD1 and Y16.CZ other bump:2.78269 Ang Y14.CG and Y16.CZ other bump:2.21492 Ang Y14.CD1 and Y16.CZ other bump:2.71878 Ang Y14.CE1 and Y16.CZ other bump:2.64032 Ang Y14.CD1 and Y16.CE2 other bump:2.38399 Ang Y14.CE1 and Y16.CE2 other bump:3.12571 Ang Y14.CZ and Y16.CE2 other bump:2.46254 Ang N4.OD1 and Y16.CE1 other bump:2.96873 Ang Y14.CB and Y16.CE1 other bump:2.71897 Ang Y14.CG and Y16.CE1 other bump:2.02075 Ang Y14.CD1 and Y16.CE1 other bump:2.98008 Ang Y14.CE1 and Y16.CE1 other bump:2.84219 Ang Y14.CD1 and Y16.CD2 other bump:2.30145 Ang Y14.CE1 and Y16.CD2 other bump:2.28874 Ang Y14.CD1 and Y16.CD1 other bump:2.92548 Ang Y14.CE1 and Y16.CD1 other bump:2.67667 Ang Y14.CD1 and Y16.CG other bump:3.18917 Ang F7.CE2 and Y14.C other bump:2.90845 Ang H3.CD2 and Y14.CZ other bump:2.34135 Ang H3.CG and Y14.CE2 other bump:2.10423 Ang H3.CD2 and Y14.CE2 other bump:2.25422 Ang H3.NE2 and Y14.CE2 other bump:2.58734 Ang H3.ND1 and Y14.CE2 other bump:2.55069 Ang H3.CE1 and Y14.CE2 other bump:2.71422 Ang F7.CZ and Y14.CD2 other bump:2.04448 Ang H3.CG and Y14.CD2 other bump:1.15929 Ang H3.CD2 and Y14.CD2 other bump:0.969526 Ang H3.NE2 and Y14.CD2 other bump:2.31831 Ang H3.ND1 and Y14.CD2 other bump:1.85998 Ang H3.CE1 and Y14.CD2 other bump:2.52381 Ang H3.CD2 and Y14.CD1 other bump:2.49561 Ang F7.CE2 and Y14.CG other bump:2.85885 Ang H3.CG and Y14.CG other bump:1.53125 Ang H3.CD2 and Y14.CG other bump:1.7542 Ang H3.NE2 and Y14.CG other bump:2.18021 Ang F7.CD2 and Y14.CB other bump:1.31813 Ang F7.CE2 and Y14.CB other bump:2.33674 Ang F7.CZ and Y14.CB other bump:2.35867 Ang H3.CD2 and Y14.CB other bump:2.26132 Ang H3.NE2 and Y14.CB other bump:2.7005 Ang F7.CD2 and Y14.CA other bump:1.71303 Ang F7.CE2 and Y14.CA other bump:2.573 Ang F7.CZ and Y14.CA other bump:2.36211 Ang F7.CD2 and Y14.N other bump:2.09734 Ang F7.CE2 and Y14.N other bump:3.10326 Ang F7.CZ and Y14.N other bump:3.05019 Ang F7.CD2 and N13.C other bump:2.82461 Ang F7.CE2 and N13.C other bump:2.64658 Ang F7.CB and L12.O other bump:3.02079 Ang F7.CZ and L12.CD1 other bump:1.76326 Ang F7.CD1 and L12.CD1 other bump:1.97337 Ang F7.CE1 and L12.CD1 other bump:1.8246 Ang H3.NE2 and F7.CZ other bump:2.32308 Ang H3.CE1 and F7.CZ other bump:2.88808 Ang H3.CD2 and F7.CE2 other bump:2.27832 Ang H3.NE2 and F7.CE2 other bump:2.64769 Ang H3.NE2 and F7.CE1 other bump:2.49456 Ang H3.CE1 and F7.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIP 8abp 43 :GEKTLNAIDSLAASGAKGFVICTP Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD Number of specific fragments= 2 total=332 Number of alignments=101 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPH 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPD Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD Number of specific fragments= 2 total=334 Number of alignments=102 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 8abp 3 :LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.18907 Ang V35.CG2 and F37.CZ other bump:2.9422 Ang V35.CB and F37.CE1 other bump:1.80264 Ang V35.CG2 and F37.CE1 other bump:1.77184 Ang G6.CA and Y34.OH other bump:2.56053 Ang G6.C and Y34.OH other bump:2.92897 Ang G6.N and Y34.CZ other bump:2.33569 Ang G6.CA and Y34.CZ other bump:3.08826 Ang I5.C and Y34.CE1 other bump:2.83511 Ang G6.N and Y34.CE1 other bump:2.71666 Ang G6.CA and Y34.CE1 other bump:2.4208 Ang D27.OD1 and Y34.CB other bump:2.63074 Ang D27.CB and Y32.O other bump:2.51701 Ang K26.CB and Y32.OH other bump:3.17418 Ang D27.CA and Y32.CZ other bump:2.56683 Ang D27.OD2 and Y32.CZ other bump:2.41692 Ang D27.CG and Y32.CE1 other bump:1.34273 Ang D27.OD2 and Y32.CE1 other bump:1.50163 Ang D27.OD2 and Y32.CD1 other bump:2.73754 Ang D27.OD2 and Y32.CG neighbor-bump: 2.27112 Ang L30.O and N31.CB neighbor-bump: 2.6169 Ang L30.C and N31.CB other bump:2.83215 Ang H21.CE1 and F25.CZ other bump:2.6895 Ang H21.NE2 and F25.CZ other bump:2.77221 Ang H21.CD2 and F25.CE1 other bump:2.66368 Ang H21.CE1 and F25.CE1 other bump:2.14058 Ang H21.NE2 and F25.CE1 other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79435 Ang H14.O and P18.CG other bump:2.92353 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDK 8abp 42 :DGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARG Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.46951 Ang F21.CZ and I38.CD1 other bump:2.92979 Ang F21.CE1 and I38.CG1 other bump:2.73556 Ang F21.CZ and I38.CG1 other bump:2.69437 Ang I10.CB and E37.OE2 other bump:1.96453 Ang L6.CD1 and Y34.OH other bump:3.00472 Ang I25.CD1 and Y34.OH other bump:3.15217 Ang I25.CG1 and Y34.CZ other bump:2.63588 Ang I25.CD1 and Y34.CZ other bump:2.92171 Ang E30.CB and Y34.CZ other bump:3.1157 Ang L6.CB and Y34.CE2 other bump:2.85321 Ang I25.CG1 and Y34.CE1 other bump:1.73098 Ang I25.CD1 and Y34.CE1 other bump:2.19221 Ang E30.CB and Y34.CE1 other bump:2.57349 Ang E30.O and Y34.CD1 other bump:2.60608 Ang I25.CD1 and Y34.CD1 other bump:2.70918 Ang K7.CE and K33.CD other bump:2.30475 Ang K7.NZ and K33.CD neighbor-bump: 2.72325 Ang I31.CG2 and M32.N other bump:2.3619 Ang H27.CB and E30.OE2 other bump:2.28552 Ang H27.CA and E30.OE1 other bump:1.30524 Ang H27.O and E30.OE1 other bump:1.97864 Ang H27.C and E30.OE1 other bump:2.64681 Ang H27.CB and E30.OE1 other bump:3.04718 Ang H27.CA and E30.CD other bump:2.53966 Ang H27.O and E30.CD other bump:3.14082 Ang H27.C and E30.CD other bump:2.83555 Ang H27.CB and E30.CD other bump:2.53333 Ang I25.CD1 and E30.CB other bump:2.45805 Ang H27.CE1 and I29.CD1 other bump:2.94003 Ang H27.CE1 and I29.CG1 other bump:2.87603 Ang H27.ND1 and I29.CB other bump:2.83507 Ang H27.CE1 and I29.CB other bump:2.20284 Ang L6.CD1 and P26.CD neighbor-bump: 2.94794 Ang I25.CG1 and P26.CD other bump:2.53746 Ang L6.CD1 and P26.CG other bump:2.64379 Ang I18.CG2 and G20.O other bump:3.05624 Ang A13.CB and I18.CD1 other bump:2.48977 Ang N5.O and V9.CG2 other bump:2.8389 Ang E4.OE2 and Y8.CZ other bump:2.30477 Ang E4.OE2 and Y8.CE1 other bump:2.64155 Ang E4.O and Y8.CD1 self-bump: 1.38331 Ang P3.N and P3.CD T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 3 total=337 Number of alignments=103 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSP 8abp 3 :LKLGFLVKQPEEPWFQT Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79434 Ang H14.O and P18.CG other bump:2.92352 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIMKY 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPDPKLGSAI Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 34 residues other bump:2.14621 Ang L5.CG and Y33.OH other bump:1.93329 Ang L5.CB and Y33.OH other bump:1.65662 Ang L5.CD1 and Y33.OH other bump:2.83104 Ang L5.CB and Y33.CZ other bump:2.99609 Ang L5.CB and Y33.CE2 other bump:2.2937 Ang I24.CD1 and Y33.CE1 other bump:2.69115 Ang E29.CB and Y33.CE1 other bump:2.87987 Ang I9.CD1 and Y33.CD2 other bump:2.81548 Ang I24.CD1 and Y33.CD1 other bump:2.70918 Ang K6.CE and K32.CD other bump:2.30475 Ang K6.NZ and K32.CD neighbor-bump: 2.72325 Ang I30.CG2 and M31.N other bump:2.3619 Ang H26.CB and E29.OE2 other bump:2.28552 Ang H26.CA and E29.OE1 other bump:1.30524 Ang H26.O and E29.OE1 other bump:1.97864 Ang H26.C and E29.OE1 other bump:2.64681 Ang H26.CB and E29.OE1 other bump:3.04718 Ang H26.CA and E29.CD other bump:2.53966 Ang H26.O and E29.CD other bump:3.14082 Ang H26.C and E29.CD other bump:2.83555 Ang H26.CB and E29.CD other bump:2.53333 Ang I24.CD1 and E29.CB other bump:2.45805 Ang H26.CE1 and I28.CD1 other bump:2.94003 Ang H26.CE1 and I28.CG1 other bump:2.87603 Ang H26.ND1 and I28.CB other bump:2.83507 Ang H26.CE1 and I28.CB other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD T0191 81 :DKDAQLIGA 8abp 75 :VAKARGYDM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 107 :GIG 8abp 303 :LGG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 5 total=342 Number of alignments=104 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 8abp 3 :LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.18907 Ang V35.CG2 and F37.CZ other bump:2.9422 Ang V35.CB and F37.CE1 other bump:1.80264 Ang V35.CG2 and F37.CE1 other bump:1.77184 Ang G6.CA and Y34.OH other bump:2.56053 Ang G6.C and Y34.OH other bump:2.92897 Ang G6.N and Y34.CZ other bump:2.33569 Ang G6.CA and Y34.CZ other bump:3.08826 Ang I5.C and Y34.CE1 other bump:2.83511 Ang G6.N and Y34.CE1 other bump:2.71666 Ang G6.CA and Y34.CE1 other bump:2.4208 Ang D27.OD1 and Y34.CB other bump:2.63074 Ang D27.CB and Y32.O other bump:2.51701 Ang K26.CB and Y32.OH other bump:3.17418 Ang D27.CA and Y32.CZ other bump:2.56683 Ang D27.OD2 and Y32.CZ other bump:2.41692 Ang D27.CG and Y32.CE1 other bump:1.34273 Ang D27.OD2 and Y32.CE1 other bump:1.50163 Ang D27.OD2 and Y32.CD1 other bump:2.73754 Ang D27.OD2 and Y32.CG neighbor-bump: 2.27112 Ang L30.O and N31.CB neighbor-bump: 2.6169 Ang L30.C and N31.CB other bump:2.83215 Ang H21.CE1 and F25.CZ other bump:2.6895 Ang H21.NE2 and F25.CZ other bump:2.77221 Ang H21.CD2 and F25.CE1 other bump:2.66368 Ang H21.CE1 and F25.CE1 other bump:2.14058 Ang H21.NE2 and F25.CE1 other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79435 Ang H14.O and P18.CG other bump:2.92353 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIP 8abp 42 :DGEKTLNAIDSLAASGAKGFVICTP Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.20284 Ang L6.CD1 and P26.CD neighbor-bump: 2.94794 Ang I25.CG1 and P26.CD other bump:2.53746 Ang L6.CD1 and P26.CG other bump:2.64379 Ang I18.CG2 and G20.O other bump:3.05624 Ang A13.CB and I18.CD1 other bump:2.48977 Ang N5.O and V9.CG2 other bump:2.8389 Ang E4.OE2 and Y8.CZ other bump:2.30477 Ang E4.OE2 and Y8.CE1 other bump:2.64155 Ang E4.O and Y8.CD1 self-bump: 1.38331 Ang P3.N and P3.CD Number of specific fragments= 2 total=344 Number of alignments=105 # Reading fragments from alignment file # T0191 read from T0191-8abp-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 6 :TKVIGLIGHPVEHSFSP 8abp 3 :LKLGFLVKQPEEPWFQT Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:1.31505 Ang H14.O and P18.CD other bump:2.49251 Ang H14.C and P18.CD other bump:2.9737 Ang S15.C and P18.CD other bump:1.79434 Ang H14.O and P18.CG other bump:2.92352 Ang H14.C and P18.CG other bump:2.88339 Ang I8.CG2 and F16.CD2 other bump:2.73503 Ang I8.CG2 and F16.CG T0191 23 :IMHNAAFKDKGLNYVYVAFDV 8abp 22 :KFADKAGKDLGFEVIKIAVPD Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.46508 Ang V18.CG2 and F20.CZ other bump:2.89061 Ang V18.CB and F20.CE1 other bump:2.65639 Ang V18.CG2 and F20.CE1 other bump:2.53841 Ang N5.N and Y17.OH other bump:2.86909 Ang H4.CB and Y17.OH other bump:2.57163 Ang H4.CD2 and Y17.OH other bump:2.66293 Ang N5.OD1 and Y17.CZ other bump:2.78269 Ang Y15.CG and Y17.CZ other bump:2.21492 Ang Y15.CD1 and Y17.CZ other bump:2.71878 Ang Y15.CE1 and Y17.CZ other bump:2.64032 Ang Y15.CD1 and Y17.CE2 other bump:2.38399 Ang Y15.CE1 and Y17.CE2 other bump:3.12571 Ang Y15.CZ and Y17.CE2 other bump:2.46252 Ang N5.OD1 and Y17.CE1 other bump:2.96873 Ang Y15.CB and Y17.CE1 other bump:2.71897 Ang Y15.CG and Y17.CE1 other bump:2.02075 Ang Y15.CD1 and Y17.CE1 other bump:2.98008 Ang Y15.CE1 and Y17.CE1 other bump:2.84219 Ang Y15.CD1 and Y17.CD2 other bump:2.30145 Ang Y15.CE1 and Y17.CD2 other bump:2.28874 Ang Y15.CD1 and Y17.CD1 other bump:2.92548 Ang Y15.CE1 and Y17.CD1 other bump:2.67667 Ang Y15.CD1 and Y17.CG other bump:3.18917 Ang F8.CE2 and Y15.C other bump:2.90845 Ang H4.CD2 and Y15.CZ other bump:2.34135 Ang H4.CG and Y15.CE2 other bump:2.10423 Ang H4.CD2 and Y15.CE2 other bump:2.25423 Ang H4.NE2 and Y15.CE2 other bump:2.58733 Ang H4.ND1 and Y15.CE2 other bump:2.55068 Ang H4.CE1 and Y15.CE2 other bump:2.71422 Ang F8.CZ and Y15.CD2 other bump:2.04448 Ang H4.CG and Y15.CD2 other bump:1.15929 Ang H4.CD2 and Y15.CD2 other bump:0.969522 Ang H4.NE2 and Y15.CD2 other bump:2.3183 Ang H4.ND1 and Y15.CD2 other bump:1.85997 Ang H4.CE1 and Y15.CD2 other bump:2.5238 Ang H4.CD2 and Y15.CD1 other bump:2.49561 Ang F8.CE2 and Y15.CG other bump:2.85884 Ang H4.CG and Y15.CG other bump:1.53124 Ang H4.CD2 and Y15.CG other bump:1.75419 Ang H4.NE2 and Y15.CG other bump:2.18021 Ang F8.CD2 and Y15.CB other bump:1.31813 Ang F8.CE2 and Y15.CB other bump:2.33674 Ang F8.CZ and Y15.CB other bump:2.35866 Ang H4.CD2 and Y15.CB other bump:2.2613 Ang H4.NE2 and Y15.CB other bump:2.7005 Ang F8.CD2 and Y15.CA other bump:1.71303 Ang F8.CE2 and Y15.CA other bump:2.573 Ang F8.CZ and Y15.CA other bump:2.36211 Ang F8.CD2 and Y15.N other bump:2.09734 Ang F8.CE2 and Y15.N other bump:3.10326 Ang F8.CZ and Y15.N other bump:3.05019 Ang F8.CD2 and N14.C other bump:2.82461 Ang F8.CE2 and N14.C other bump:2.64658 Ang F8.CB and L13.O other bump:3.02079 Ang F8.CZ and L13.CD1 other bump:1.76326 Ang F8.CD1 and L13.CD1 other bump:1.97337 Ang F8.CE1 and L13.CD1 other bump:1.8246 Ang H4.NE2 and F8.CZ other bump:2.32307 Ang H4.CE1 and F8.CZ other bump:2.88808 Ang H4.CD2 and F8.CE2 other bump:2.27831 Ang H4.NE2 and F8.CE2 other bump:2.6477 Ang H4.NE2 and F8.CE1 other bump:2.49456 Ang H4.CE1 and F8.CE1 T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKI 8abp 43 :GEKTLNAIDSLAASGAKGFVICTPDPK Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.63966 Ang H26.ND1 and I28.CD1 other bump:2.08157 Ang H26.CE1 and I28.CD1 other bump:1.93494 Ang H26.ND1 and I28.CG1 other bump:2.0338 Ang H26.CE1 and I28.CG1 other bump:2.20284 Ang L5.CD1 and P25.CD neighbor-bump: 2.94794 Ang I24.CG1 and P25.CD other bump:2.53746 Ang L5.CD1 and P25.CG other bump:2.64379 Ang I17.CG2 and G19.O other bump:3.05624 Ang A12.CB and I17.CD1 other bump:2.48977 Ang N4.O and V8.CG2 other bump:2.8389 Ang E3.OE2 and Y7.CZ other bump:2.30477 Ang E3.OE2 and Y7.CE1 other bump:2.64155 Ang E3.O and Y7.CD1 self-bump: 1.3931 Ang P2.N and P2.CD Number of specific fragments= 3 total=347 Number of alignments=106 # Reading fragments from alignment file # T0191 read from T0191-8abp-local-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-local-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVG 8abp 260 :GYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGG Fragment has 45 clashes (null) has 45 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 48 residues other bump:2.68053 Ang K41.CD and V46.CG2 other bump:2.98463 Ang K41.CD and V46.CG1 other bump:2.29392 Ang E31.CD and V36.CG2 other bump:2.25213 Ang E31.OE2 and V36.CG2 other bump:2.51914 Ang N32.O and V36.CG2 other bump:1.99922 Ang E31.CG and V36.CG2 other bump:2.10711 Ang E31.CD and V36.CG1 other bump:0.863651 Ang E31.OE2 and V36.CG1 other bump:2.55018 Ang E31.CD and V36.CB other bump:1.78192 Ang E31.OE2 and V36.CB other bump:2.71248 Ang E31.CG and V36.CB other bump:3.21763 Ang E31.CD and V36.CA other bump:2.69515 Ang E31.OE2 and V36.CA other bump:2.89991 Ang E31.CG and V36.CA other bump:2.00451 Ang N20.CG and Y23.OH other bump:2.30858 Ang N20.ND2 and Y23.OH other bump:2.62948 Ang N20.CB and Y23.OH other bump:1.51402 Ang N20.CG and Y23.CZ other bump:1.76453 Ang N20.ND2 and Y23.CZ other bump:2.84685 Ang N20.CB and Y23.CZ other bump:1.43606 Ang N20.OD1 and Y23.CZ other bump:2.49637 Ang N20.CG and Y23.CE2 other bump:1.94707 Ang N20.ND2 and Y23.CE2 other bump:2.51836 Ang N20.OD1 and Y23.CE2 other bump:1.55521 Ang N20.CG and Y23.CE1 other bump:2.44257 Ang N20.ND2 and Y23.CE1 other bump:3.05446 Ang N20.CA and Y23.CE1 other bump:2.77962 Ang N20.CB and Y23.CE1 other bump:0.378865 Ang N20.OD1 and Y23.CE1 other bump:3.22622 Ang N20.C and Y23.CE1 other bump:2.68664 Ang N20.ND2 and Y23.CD2 other bump:2.54792 Ang N20.CG and Y23.CD1 other bump:1.5658 Ang N20.OD1 and Y23.CD1 other bump:2.56604 Ang N20.OD1 and Y23.CG other bump:2.94922 Ang I8.CA and L19.CD2 other bump:2.25201 Ang I8.CB and L19.CD2 other bump:2.75253 Ang I8.CG1 and L19.CD2 other bump:2.68238 Ang I8.CD1 and L19.CD2 other bump:1.13245 Ang I8.CG2 and L19.CD2 other bump:2.85758 Ang I8.CB and L19.CD1 other bump:1.74706 Ang I8.CG2 and L19.CD1 other bump:3.06858 Ang I8.CB and L19.CG other bump:1.56724 Ang I8.CG2 and L19.CG other bump:2.7494 Ang I8.CG2 and L19.CB other bump:2.59116 Ang G1.O and F5.CD1 Number of specific fragments= 1 total=348 Number of alignments=107 # Reading fragments from alignment file # T0191 read from T0191-8abp-local-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-local-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 57 :ALGIVGFNVTIP 8abp 55 :ASGAKGFVICTP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues neighbor-bump: 2.94794 Ang I12.CG1 and P13.CD other bump:2.64379 Ang I5.CG2 and G7.O Number of specific fragments= 1 total=349 # Reading fragments from alignment file # T0191 read from T0191-8abp-simpleSW-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-simpleSW-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVID 8abp 260 :GYKSSEMLYNWVAKDVEPPKFTEVTD Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.17505 Ang K4.CG and K23.NZ other bump:2.05567 Ang K4.CD and K23.NZ other bump:1.56734 Ang K4.CE and K23.NZ other bump:2.31575 Ang K4.NZ and K23.NZ other bump:1.96327 Ang K4.CE and K23.CE other bump:2.93152 Ang K4.CD and K23.CD other bump:2.76279 Ang K4.CE and K23.CD other bump:3.0546 Ang V11.CG1 and V17.CG1 other bump:2.75627 Ang V11.CG1 and V17.CB Number of specific fragments= 1 total=350 Number of alignments=108 # Reading fragments from alignment file # T0191 read from T0191-8abp-simpleSW-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-simpleSW-adpstyle5.pw.a2m.gz # found chain 8abp in training set Number of specific fragments= 0 total=350 # Reading fragments from alignment file # T0191 read from T0191-8abp-vit-adpstyle1.pw.a2m.gz # 8abp read from T0191-8abp-vit-adpstyle1.pw.a2m.gz # found chain 8abp in training set T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVG 8abp 260 :GYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGG Fragment has 45 clashes (null) has 45 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 48 residues other bump:2.68053 Ang K41.CD and V46.CG2 other bump:2.98463 Ang K41.CD and V46.CG1 other bump:2.29392 Ang E31.CD and V36.CG2 other bump:2.25213 Ang E31.OE2 and V36.CG2 other bump:2.51914 Ang N32.O and V36.CG2 other bump:1.99922 Ang E31.CG and V36.CG2 other bump:2.10711 Ang E31.CD and V36.CG1 other bump:0.863651 Ang E31.OE2 and V36.CG1 other bump:2.55018 Ang E31.CD and V36.CB other bump:1.78192 Ang E31.OE2 and V36.CB other bump:2.71248 Ang E31.CG and V36.CB other bump:3.21763 Ang E31.CD and V36.CA other bump:2.69515 Ang E31.OE2 and V36.CA other bump:2.89991 Ang E31.CG and V36.CA other bump:2.00451 Ang N20.CG and Y23.OH other bump:2.30858 Ang N20.ND2 and Y23.OH other bump:2.62948 Ang N20.CB and Y23.OH other bump:1.51402 Ang N20.CG and Y23.CZ other bump:1.76453 Ang N20.ND2 and Y23.CZ other bump:2.84685 Ang N20.CB and Y23.CZ other bump:1.43606 Ang N20.OD1 and Y23.CZ other bump:2.49637 Ang N20.CG and Y23.CE2 other bump:1.94707 Ang N20.ND2 and Y23.CE2 other bump:2.51836 Ang N20.OD1 and Y23.CE2 other bump:1.55521 Ang N20.CG and Y23.CE1 other bump:2.44257 Ang N20.ND2 and Y23.CE1 other bump:3.05446 Ang N20.CA and Y23.CE1 other bump:2.77962 Ang N20.CB and Y23.CE1 other bump:0.378865 Ang N20.OD1 and Y23.CE1 other bump:3.22622 Ang N20.C and Y23.CE1 other bump:2.68664 Ang N20.ND2 and Y23.CD2 other bump:2.54792 Ang N20.CG and Y23.CD1 other bump:1.5658 Ang N20.OD1 and Y23.CD1 other bump:2.56604 Ang N20.OD1 and Y23.CG other bump:2.94922 Ang I8.CA and L19.CD2 other bump:2.25201 Ang I8.CB and L19.CD2 other bump:2.75253 Ang I8.CG1 and L19.CD2 other bump:2.68238 Ang I8.CD1 and L19.CD2 other bump:1.13245 Ang I8.CG2 and L19.CD2 other bump:2.85758 Ang I8.CB and L19.CD1 other bump:1.74706 Ang I8.CG2 and L19.CD1 other bump:3.06858 Ang I8.CB and L19.CG other bump:1.56724 Ang I8.CG2 and L19.CG other bump:2.7494 Ang I8.CG2 and L19.CB other bump:2.59116 Ang G1.O and F5.CD1 Number of specific fragments= 1 total=351 Number of alignments=109 # Reading fragments from alignment file # T0191 read from T0191-8abp-vit-adpstyle5.pw.a2m.gz # 8abp read from T0191-8abp-vit-adpstyle5.pw.a2m.gz # found chain 8abp in training set T0191 57 :ALGIVGFNVTIP 8abp 55 :ASGAKGFVICTP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues neighbor-bump: 2.94794 Ang I12.CG1 and P13.CD other bump:2.64379 Ang I5.CG2 and G7.O Number of specific fragments= 1 total=352 # command:# Prefix for input files set to 1ccwA/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1ccwA-T0191-local-adpstyle1.pw.a2m.gz # 1ccwA read from 1ccwA-T0191-local-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDK 1ccwA 26 :AFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDE Fragment has 82 clashes (null) has 82 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 57 residues other bump:2.29888 Ang K23.NZ and G57.CA other bump:2.64632 Ang K23.CE and G57.CA other bump:2.30771 Ang K23.NZ and G57.N other bump:2.65756 Ang Y50.CD2 and I54.CD1 other bump:2.55288 Ang Y50.CE2 and I54.CD1 other bump:2.13884 Ang K23.NZ and E53.O other bump:2.58217 Ang L22.CB and Y50.OH other bump:2.7827 Ang I34.CD1 and Y50.OH other bump:3.08383 Ang H43.ND1 and I47.CD1 other bump:2.85881 Ang H43.CB and I47.CD1 other bump:1.44781 Ang N38.CA and H43.NE2 other bump:1.46424 Ang N38.CB and H43.NE2 other bump:1.55326 Ang N38.CG and H43.NE2 other bump:1.49053 Ang N38.OD1 and H43.NE2 other bump:2.15035 Ang N38.O and H43.NE2 other bump:1.55982 Ang N38.C and H43.NE2 other bump:3.0581 Ang F37.C and H43.CE1 other bump:2.11552 Ang N38.N and H43.CE1 other bump:1.20921 Ang N38.CA and H43.CE1 other bump:0.433619 Ang N38.CB and H43.CE1 other bump:1.78685 Ang N38.CG and H43.CE1 other bump:2.81289 Ang N38.ND2 and H43.CE1 other bump:2.47629 Ang N38.OD1 and H43.CE1 other bump:2.58788 Ang N38.O and H43.CE1 other bump:2.20532 Ang N38.C and H43.CE1 other bump:2.552 Ang N38.CA and H43.ND1 other bump:1.081 Ang N38.CB and H43.ND1 other bump:1.604 Ang N38.CG and H43.ND1 other bump:2.07926 Ang N38.ND2 and H43.ND1 other bump:2.79396 Ang N38.CA and H43.CD2 other bump:2.13122 Ang N38.CB and H43.CD2 other bump:1.1332 Ang N38.CG and H43.CD2 other bump:2.18933 Ang N38.ND2 and H43.CD2 other bump:0.664105 Ang N38.OD1 and H43.CD2 other bump:2.69556 Ang N38.C and H43.CD2 other bump:3.23871 Ang N38.CA and H43.CG other bump:1.97218 Ang N38.CB and H43.CG other bump:1.18974 Ang N38.CG and H43.CG other bump:1.55355 Ang N38.ND2 and H43.CG other bump:1.8525 Ang N38.OD1 and H43.CG other bump:2.5216 Ang N38.CG and H43.CB other bump:2.04639 Ang N38.ND2 and H43.CB other bump:3.06398 Ang N38.CG and H43.CA other bump:1.98984 Ang N38.ND2 and H43.CA neighbor-bump: 2.70165 Ang T40.C and I41.CG1 neighbor-bump: 2.27408 Ang T40.O and I41.CG1 neighbor-bump: 2.53027 Ang T40.C and I41.CB neighbor-bump: 2.08888 Ang T40.O and I41.CB other bump:1.54692 Ang I26.CD1 and I34.CD1 other bump:2.84537 Ang I26.CG1 and I34.CG1 other bump:1.79447 Ang I26.CD1 and I34.CG1 other bump:2.83392 Ang V11.CG1 and V25.CG1 other bump:2.91193 Ang V17.CG1 and N21.CB neighbor-bump: 2.35541 Ang A14.CB and F15.N self-bump: 2.18913 Ang A14.CB and A14.C other bump:3.05696 Ang Y12.CE2 and A14.CB self-bump: 1.27466 Ang A14.CA and A14.CB other bump:2.02305 Ang F3.O and Y10.OH other bump:1.99305 Ang F3.CA and Y10.OH other bump:1.92953 Ang F3.CB and Y10.OH other bump:2.16742 Ang F3.C and Y10.OH other bump:2.44797 Ang L8.CD2 and Y10.OH other bump:2.97082 Ang K4.N and Y10.CZ other bump:2.3322 Ang F3.O and Y10.CZ other bump:2.70833 Ang L8.CB and Y10.CZ other bump:2.31184 Ang F3.CA and Y10.CZ other bump:1.76023 Ang F3.CB and Y10.CZ other bump:2.97593 Ang F3.CG and Y10.CZ other bump:2.16154 Ang F3.C and Y10.CZ other bump:2.06887 Ang K4.N and Y10.CE2 other bump:2.63129 Ang K4.CA and Y10.CE2 other bump:2.06226 Ang F3.O and Y10.CE2 other bump:3.02859 Ang L8.CB and Y10.CE2 other bump:2.73532 Ang F3.CA and Y10.CE2 other bump:2.70186 Ang F3.CB and Y10.CE2 other bump:1.82098 Ang F3.C and Y10.CE2 other bump:1.97573 Ang F3.CB and Y10.CE1 other bump:2.75797 Ang F3.CG and Y10.CE1 other bump:2.72101 Ang K4.N and Y10.CD2 other bump:2.99175 Ang K4.CA and Y10.CD2 other bump:3.02171 Ang F3.C and Y10.CD2 other bump:2.97463 Ang F3.CB and Y10.CD1 Number of specific fragments= 1 total=353 Number of alignments=110 # Reading fragments from alignment file # T0191 read from 1ccwA-T0191-local-adpstyle5.pw.a2m.gz # 1ccwA read from 1ccwA-T0191-local-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 27 :AAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1ccwA 25 :HAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCD Fragment has 79 clashes (null) has 79 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 57 residues other bump:2.65756 Ang Y51.CD2 and I55.CD1 other bump:2.55288 Ang Y51.CE2 and I55.CD1 other bump:2.13884 Ang K24.NZ and E54.O other bump:2.58217 Ang L23.CB and Y51.OH other bump:2.7827 Ang I35.CD1 and Y51.OH other bump:3.08383 Ang H44.ND1 and I48.CD1 other bump:2.85881 Ang H44.CB and I48.CD1 other bump:1.44781 Ang N39.CA and H44.NE2 other bump:1.46424 Ang N39.CB and H44.NE2 other bump:1.55326 Ang N39.CG and H44.NE2 other bump:1.49053 Ang N39.OD1 and H44.NE2 other bump:2.15035 Ang N39.O and H44.NE2 other bump:1.55982 Ang N39.C and H44.NE2 other bump:3.0581 Ang F38.C and H44.CE1 other bump:2.11552 Ang N39.N and H44.CE1 other bump:1.20921 Ang N39.CA and H44.CE1 other bump:0.433619 Ang N39.CB and H44.CE1 other bump:1.78685 Ang N39.CG and H44.CE1 other bump:2.81289 Ang N39.ND2 and H44.CE1 other bump:2.47629 Ang N39.OD1 and H44.CE1 other bump:2.58788 Ang N39.O and H44.CE1 other bump:2.20532 Ang N39.C and H44.CE1 other bump:2.552 Ang N39.CA and H44.ND1 other bump:1.081 Ang N39.CB and H44.ND1 other bump:1.604 Ang N39.CG and H44.ND1 other bump:2.07926 Ang N39.ND2 and H44.ND1 other bump:2.79396 Ang N39.CA and H44.CD2 other bump:2.13122 Ang N39.CB and H44.CD2 other bump:1.1332 Ang N39.CG and H44.CD2 other bump:2.18933 Ang N39.ND2 and H44.CD2 other bump:0.664105 Ang N39.OD1 and H44.CD2 other bump:2.69556 Ang N39.C and H44.CD2 other bump:3.23871 Ang N39.CA and H44.CG other bump:1.97218 Ang N39.CB and H44.CG other bump:1.18974 Ang N39.CG and H44.CG other bump:1.55355 Ang N39.ND2 and H44.CG other bump:1.8525 Ang N39.OD1 and H44.CG other bump:2.5216 Ang N39.CG and H44.CB other bump:2.04639 Ang N39.ND2 and H44.CB other bump:3.06398 Ang N39.CG and H44.CA other bump:1.98984 Ang N39.ND2 and H44.CA neighbor-bump: 2.70165 Ang T41.C and I42.CG1 neighbor-bump: 2.27408 Ang T41.O and I42.CG1 neighbor-bump: 2.53027 Ang T41.C and I42.CB neighbor-bump: 2.08888 Ang T41.O and I42.CB other bump:1.54692 Ang I27.CD1 and I35.CD1 other bump:2.84537 Ang I27.CG1 and I35.CG1 other bump:1.79447 Ang I27.CD1 and I35.CG1 other bump:2.83392 Ang V12.CG1 and V26.CG1 other bump:2.91193 Ang V18.CG1 and N22.CB neighbor-bump: 2.35541 Ang A15.CB and F16.N self-bump: 2.18913 Ang A15.CB and A15.C other bump:3.05696 Ang Y13.CE2 and A15.CB self-bump: 1.27466 Ang A15.CA and A15.CB other bump:2.02305 Ang F4.O and Y11.OH other bump:1.99305 Ang F4.CA and Y11.OH other bump:1.92953 Ang F4.CB and Y11.OH other bump:2.16742 Ang F4.C and Y11.OH other bump:2.44797 Ang L9.CD2 and Y11.OH other bump:2.3322 Ang F4.O and Y11.CZ other bump:2.70833 Ang L9.CB and Y11.CZ other bump:2.31184 Ang F4.CA and Y11.CZ other bump:1.76023 Ang F4.CB and Y11.CZ other bump:2.97593 Ang F4.CG and Y11.CZ other bump:2.16154 Ang F4.C and Y11.CZ other bump:2.97082 Ang K5.N and Y11.CZ other bump:2.63129 Ang K5.CA and Y11.CE2 other bump:2.06226 Ang F4.O and Y11.CE2 other bump:3.02859 Ang L9.CB and Y11.CE2 other bump:2.73532 Ang F4.CA and Y11.CE2 other bump:2.70186 Ang F4.CB and Y11.CE2 other bump:1.82098 Ang F4.C and Y11.CE2 other bump:2.06887 Ang K5.N and Y11.CE2 other bump:1.97573 Ang F4.CB and Y11.CE1 other bump:2.75797 Ang F4.CG and Y11.CE1 other bump:2.99175 Ang K5.CA and Y11.CD2 other bump:3.02171 Ang F4.C and Y11.CD2 other bump:2.72101 Ang K5.N and Y11.CD2 other bump:2.97463 Ang F4.CB and Y11.CD1 Number of specific fragments= 1 total=354 Number of alignments=111 # Reading fragments from alignment file # T0191 read from 1ccwA-T0191-vit-adpstyle1.pw.a2m.gz # 1ccwA read from 1ccwA-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDK 1ccwA 26 :AFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDE Fragment has 82 clashes (null) has 82 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 57 residues other bump:2.29888 Ang K23.NZ and G57.CA other bump:2.64632 Ang K23.CE and G57.CA other bump:2.30771 Ang K23.NZ and G57.N other bump:2.65756 Ang Y50.CD2 and I54.CD1 other bump:2.55288 Ang Y50.CE2 and I54.CD1 other bump:2.13884 Ang K23.NZ and E53.O other bump:2.58217 Ang L22.CB and Y50.OH other bump:2.7827 Ang I34.CD1 and Y50.OH other bump:3.08383 Ang H43.ND1 and I47.CD1 other bump:2.85881 Ang H43.CB and I47.CD1 other bump:1.44781 Ang N38.CA and H43.NE2 other bump:1.46424 Ang N38.CB and H43.NE2 other bump:1.55326 Ang N38.CG and H43.NE2 other bump:1.49053 Ang N38.OD1 and H43.NE2 other bump:2.15035 Ang N38.O and H43.NE2 other bump:1.55982 Ang N38.C and H43.NE2 other bump:3.0581 Ang F37.C and H43.CE1 other bump:2.11552 Ang N38.N and H43.CE1 other bump:1.20921 Ang N38.CA and H43.CE1 other bump:0.433619 Ang N38.CB and H43.CE1 other bump:1.78685 Ang N38.CG and H43.CE1 other bump:2.81289 Ang N38.ND2 and H43.CE1 other bump:2.47629 Ang N38.OD1 and H43.CE1 other bump:2.58788 Ang N38.O and H43.CE1 other bump:2.20532 Ang N38.C and H43.CE1 other bump:2.552 Ang N38.CA and H43.ND1 other bump:1.081 Ang N38.CB and H43.ND1 other bump:1.604 Ang N38.CG and H43.ND1 other bump:2.07926 Ang N38.ND2 and H43.ND1 other bump:2.79396 Ang N38.CA and H43.CD2 other bump:2.13122 Ang N38.CB and H43.CD2 other bump:1.1332 Ang N38.CG and H43.CD2 other bump:2.18933 Ang N38.ND2 and H43.CD2 other bump:0.664105 Ang N38.OD1 and H43.CD2 other bump:2.69556 Ang N38.C and H43.CD2 other bump:3.23871 Ang N38.CA and H43.CG other bump:1.97218 Ang N38.CB and H43.CG other bump:1.18974 Ang N38.CG and H43.CG other bump:1.55355 Ang N38.ND2 and H43.CG other bump:1.8525 Ang N38.OD1 and H43.CG other bump:2.5216 Ang N38.CG and H43.CB other bump:2.04639 Ang N38.ND2 and H43.CB other bump:3.06398 Ang N38.CG and H43.CA other bump:1.98984 Ang N38.ND2 and H43.CA neighbor-bump: 2.70165 Ang T40.C and I41.CG1 neighbor-bump: 2.27408 Ang T40.O and I41.CG1 neighbor-bump: 2.53027 Ang T40.C and I41.CB neighbor-bump: 2.08888 Ang T40.O and I41.CB other bump:1.54692 Ang I26.CD1 and I34.CD1 other bump:2.84537 Ang I26.CG1 and I34.CG1 other bump:1.79447 Ang I26.CD1 and I34.CG1 other bump:2.83392 Ang V11.CG1 and V25.CG1 other bump:2.91193 Ang V17.CG1 and N21.CB neighbor-bump: 2.35541 Ang A14.CB and F15.N self-bump: 2.18913 Ang A14.CB and A14.C other bump:3.05696 Ang Y12.CE2 and A14.CB self-bump: 1.27466 Ang A14.CA and A14.CB other bump:2.02305 Ang F3.O and Y10.OH other bump:1.99305 Ang F3.CA and Y10.OH other bump:1.92953 Ang F3.CB and Y10.OH other bump:2.16742 Ang F3.C and Y10.OH other bump:2.44797 Ang L8.CD2 and Y10.OH other bump:2.97082 Ang K4.N and Y10.CZ other bump:2.3322 Ang F3.O and Y10.CZ other bump:2.70833 Ang L8.CB and Y10.CZ other bump:2.31184 Ang F3.CA and Y10.CZ other bump:1.76023 Ang F3.CB and Y10.CZ other bump:2.97593 Ang F3.CG and Y10.CZ other bump:2.16154 Ang F3.C and Y10.CZ other bump:2.06887 Ang K4.N and Y10.CE2 other bump:2.63129 Ang K4.CA and Y10.CE2 other bump:2.06226 Ang F3.O and Y10.CE2 other bump:3.02859 Ang L8.CB and Y10.CE2 other bump:2.73532 Ang F3.CA and Y10.CE2 other bump:2.70186 Ang F3.CB and Y10.CE2 other bump:1.82098 Ang F3.C and Y10.CE2 other bump:1.97573 Ang F3.CB and Y10.CE1 other bump:2.75797 Ang F3.CG and Y10.CE1 other bump:2.72101 Ang K4.N and Y10.CD2 other bump:2.99175 Ang K4.CA and Y10.CD2 other bump:3.02171 Ang F3.C and Y10.CD2 other bump:2.97463 Ang F3.CB and Y10.CD1 Number of specific fragments= 1 total=355 Number of alignments=112 # Reading fragments from alignment file # T0191 read from 1ccwA-T0191-vit-adpstyle5.pw.a2m.gz # 1ccwA read from 1ccwA-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 27 :AAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1ccwA 25 :HAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCD Fragment has 79 clashes (null) has 79 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 57 residues other bump:2.65756 Ang Y51.CD2 and I55.CD1 other bump:2.55288 Ang Y51.CE2 and I55.CD1 other bump:2.13884 Ang K24.NZ and E54.O other bump:2.58217 Ang L23.CB and Y51.OH other bump:2.7827 Ang I35.CD1 and Y51.OH other bump:3.08383 Ang H44.ND1 and I48.CD1 other bump:2.85881 Ang H44.CB and I48.CD1 other bump:1.44781 Ang N39.CA and H44.NE2 other bump:1.46424 Ang N39.CB and H44.NE2 other bump:1.55326 Ang N39.CG and H44.NE2 other bump:1.49053 Ang N39.OD1 and H44.NE2 other bump:2.15035 Ang N39.O and H44.NE2 other bump:1.55982 Ang N39.C and H44.NE2 other bump:3.0581 Ang F38.C and H44.CE1 other bump:2.11552 Ang N39.N and H44.CE1 other bump:1.20921 Ang N39.CA and H44.CE1 other bump:0.433619 Ang N39.CB and H44.CE1 other bump:1.78685 Ang N39.CG and H44.CE1 other bump:2.81289 Ang N39.ND2 and H44.CE1 other bump:2.47629 Ang N39.OD1 and H44.CE1 other bump:2.58788 Ang N39.O and H44.CE1 other bump:2.20532 Ang N39.C and H44.CE1 other bump:2.552 Ang N39.CA and H44.ND1 other bump:1.081 Ang N39.CB and H44.ND1 other bump:1.604 Ang N39.CG and H44.ND1 other bump:2.07926 Ang N39.ND2 and H44.ND1 other bump:2.79396 Ang N39.CA and H44.CD2 other bump:2.13122 Ang N39.CB and H44.CD2 other bump:1.1332 Ang N39.CG and H44.CD2 other bump:2.18933 Ang N39.ND2 and H44.CD2 other bump:0.664105 Ang N39.OD1 and H44.CD2 other bump:2.69556 Ang N39.C and H44.CD2 other bump:3.23871 Ang N39.CA and H44.CG other bump:1.97218 Ang N39.CB and H44.CG other bump:1.18974 Ang N39.CG and H44.CG other bump:1.55355 Ang N39.ND2 and H44.CG other bump:1.8525 Ang N39.OD1 and H44.CG other bump:2.5216 Ang N39.CG and H44.CB other bump:2.04639 Ang N39.ND2 and H44.CB other bump:3.06398 Ang N39.CG and H44.CA other bump:1.98984 Ang N39.ND2 and H44.CA neighbor-bump: 2.70165 Ang T41.C and I42.CG1 neighbor-bump: 2.27408 Ang T41.O and I42.CG1 neighbor-bump: 2.53027 Ang T41.C and I42.CB neighbor-bump: 2.08888 Ang T41.O and I42.CB other bump:1.54692 Ang I27.CD1 and I35.CD1 other bump:2.84537 Ang I27.CG1 and I35.CG1 other bump:1.79447 Ang I27.CD1 and I35.CG1 other bump:2.83392 Ang V12.CG1 and V26.CG1 other bump:2.91193 Ang V18.CG1 and N22.CB neighbor-bump: 2.35541 Ang A15.CB and F16.N self-bump: 2.18913 Ang A15.CB and A15.C other bump:3.05696 Ang Y13.CE2 and A15.CB self-bump: 1.27466 Ang A15.CA and A15.CB other bump:2.02305 Ang F4.O and Y11.OH other bump:1.99305 Ang F4.CA and Y11.OH other bump:1.92953 Ang F4.CB and Y11.OH other bump:2.16742 Ang F4.C and Y11.OH other bump:2.44797 Ang L9.CD2 and Y11.OH other bump:2.3322 Ang F4.O and Y11.CZ other bump:2.70833 Ang L9.CB and Y11.CZ other bump:2.31184 Ang F4.CA and Y11.CZ other bump:1.76023 Ang F4.CB and Y11.CZ other bump:2.97593 Ang F4.CG and Y11.CZ other bump:2.16154 Ang F4.C and Y11.CZ other bump:2.97082 Ang K5.N and Y11.CZ other bump:2.63129 Ang K5.CA and Y11.CE2 other bump:2.06226 Ang F4.O and Y11.CE2 other bump:3.02859 Ang L9.CB and Y11.CE2 other bump:2.73532 Ang F4.CA and Y11.CE2 other bump:2.70186 Ang F4.CB and Y11.CE2 other bump:1.82098 Ang F4.C and Y11.CE2 other bump:2.06887 Ang K5.N and Y11.CE2 other bump:1.97573 Ang F4.CB and Y11.CE1 other bump:2.75797 Ang F4.CG and Y11.CE1 other bump:2.99175 Ang K5.CA and Y11.CD2 other bump:3.02171 Ang F4.C and Y11.CD2 other bump:2.72101 Ang K5.N and Y11.CD2 other bump:2.97463 Ang F4.CB and Y11.CD1 Number of specific fragments= 1 total=356 Number of alignments=113 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIGAVNTIKIEDGK 1ccwA 71 :CKGLRQKCDEAGLEGILLYVGGN Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:1.51427 Ang L2.CD1 and E21.OE2 other bump:2.49188 Ang L2.CD1 and E21.CD other bump:2.19292 Ang I5.CG2 and K19.NZ other bump:2.27151 Ang I5.CG2 and K19.CE neighbor-bump: 3.04767 Ang V15.CG1 and N16.OD1 neighbor-bump: 2.89315 Ang V15.CG1 and N16.CA neighbor-bump: 2.43108 Ang V15.CB and N16.N neighbor-bump: 1.78862 Ang V15.CG1 and N16.N self-bump: 2.33528 Ang V15.CG1 and V15.C other bump:3.06379 Ang Q10.CA and V15.CG2 other bump:2.19809 Ang Q10.CG and V15.CG2 other bump:3.27224 Ang Q10.CD and V15.CG2 self-bump: 1.31675 Ang V15.CA and V15.CB other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=360 Number of alignments=114 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIGAVNTIKIEDGK 1ccwA 71 :CKGLRQKCDEAGLEGILLYVGGN Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:1.51427 Ang L2.CD1 and E21.OE2 other bump:2.49188 Ang L2.CD1 and E21.CD other bump:2.19292 Ang I5.CG2 and K19.NZ other bump:2.27151 Ang I5.CG2 and K19.CE neighbor-bump: 3.04767 Ang V15.CG1 and N16.OD1 neighbor-bump: 2.89315 Ang V15.CG1 and N16.CA neighbor-bump: 2.43108 Ang V15.CB and N16.N neighbor-bump: 1.78862 Ang V15.CG1 and N16.N self-bump: 2.33528 Ang V15.CG1 and V15.C other bump:3.06379 Ang Q10.CA and V15.CG2 other bump:2.19809 Ang Q10.CG and V15.CG2 other bump:3.27224 Ang Q10.CD and V15.CG2 self-bump: 1.31675 Ang V15.CA and V15.CB other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=364 Number of alignments=115 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=368 Number of alignments=116 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIGA 1ccwA 71 :CKGLRQKCDEAGL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=372 Number of alignments=117 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHP 1ccwA 2 :EKKTIVLGVIGSD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.31315 Ang I11.O and P14.CD other bump:3.12796 Ang G12.CA and P14.CD other bump:2.49042 Ang G12.C and P14.CD neighbor-bump: 2.159 Ang H13.N and P14.CD other bump:2.54446 Ang I11.O and P14.CG T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 15 :CHAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 62 clashes (null) has 62 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.85949 Ang G1.C and D27.OD1 other bump:1.34786 Ang S4.CA and F26.CZ other bump:1.9037 Ang S4.CB and F26.CZ other bump:1.83741 Ang S4.OG and F26.CZ other bump:2.81963 Ang S4.C and F26.CZ other bump:2.31646 Ang H3.O and F26.CZ other bump:2.19455 Ang H3.C and F26.CZ other bump:1.82076 Ang S4.N and F26.CZ other bump:2.49746 Ang S4.CA and F26.CE2 other bump:3.07124 Ang S4.CB and F26.CE2 other bump:2.27913 Ang E2.O and F26.CE2 other bump:2.55251 Ang S4.OG and F26.CE2 other bump:2.61426 Ang E2.C and F26.CE2 other bump:2.73425 Ang H3.N and F26.CE2 other bump:1.55853 Ang H3.O and F26.CE2 other bump:1.61934 Ang H3.C and F26.CE2 other bump:2.13753 Ang S4.N and F26.CE2 other bump:2.63438 Ang H3.CA and F26.CE2 other bump:2.22884 Ang S4.CA and F26.CE1 other bump:2.10405 Ang S4.CB and F26.CE1 other bump:1.76845 Ang S4.OG and F26.CE1 other bump:2.48373 Ang E2.O and F26.CD2 other bump:2.56143 Ang E2.C and F26.CD2 other bump:2.51295 Ang H3.O and F26.CD2 other bump:2.88479 Ang H3.C and F26.CD2 other bump:3.17432 Ang E2.CA and F26.CD2 other bump:2.45041 Ang S4.OG and F26.CD1 neighbor-bump: 2.35541 Ang A25.CB and F26.N self-bump: 2.18913 Ang A25.CB and A25.C other bump:3.05696 Ang Y23.CE2 and A25.CB self-bump: 1.27466 Ang A25.CA and A25.CB other bump:2.59165 Ang P7.CA and Y23.OH other bump:1.50721 Ang P7.CB and Y23.OH other bump:2.73637 Ang P7.CB and Y23.CZ other bump:2.02305 Ang F14.O and Y21.OH other bump:1.92953 Ang F14.CB and Y21.OH other bump:2.16742 Ang F14.C and Y21.OH other bump:1.99305 Ang F14.CA and Y21.OH other bump:2.44797 Ang L19.CD2 and Y21.OH other bump:2.3322 Ang F14.O and Y21.CZ other bump:1.76023 Ang F14.CB and Y21.CZ other bump:2.16154 Ang F14.C and Y21.CZ other bump:2.97082 Ang K15.N and Y21.CZ other bump:2.31184 Ang F14.CA and Y21.CZ other bump:2.70833 Ang L19.CB and Y21.CZ other bump:2.97593 Ang F14.CG and Y21.CZ other bump:2.63129 Ang K15.CA and Y21.CE2 other bump:2.06226 Ang F14.O and Y21.CE2 other bump:2.70186 Ang F14.CB and Y21.CE2 other bump:1.82098 Ang F14.C and Y21.CE2 other bump:2.06887 Ang K15.N and Y21.CE2 other bump:2.73532 Ang F14.CA and Y21.CE2 other bump:3.02859 Ang L19.CB and Y21.CE2 other bump:1.97573 Ang F14.CB and Y21.CE1 other bump:2.75797 Ang F14.CG and Y21.CE1 other bump:2.99175 Ang K15.CA and Y21.CD2 other bump:3.02171 Ang F14.C and Y21.CD2 other bump:2.72101 Ang K15.N and Y21.CD2 other bump:2.97463 Ang F14.CB and Y21.CD1 other bump:2.85394 Ang F5.CE2 and M9.SD other bump:2.91934 Ang S4.C and P7.CD neighbor-bump: 2.67106 Ang S6.N and P7.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIGAVNTIKIEDGK 1ccwA 71 :CKGLRQKCDEAGLEGILLYVGGN Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:1.51427 Ang L2.CD1 and E21.OE2 other bump:2.49188 Ang L2.CD1 and E21.CD other bump:2.19292 Ang I5.CG2 and K19.NZ other bump:2.27151 Ang I5.CG2 and K19.CE neighbor-bump: 3.04767 Ang V15.CG1 and N16.OD1 neighbor-bump: 2.89315 Ang V15.CG1 and N16.CA neighbor-bump: 2.43108 Ang V15.CB and N16.N neighbor-bump: 1.78862 Ang V15.CG1 and N16.N self-bump: 2.33528 Ang V15.CG1 and V15.C other bump:3.06379 Ang Q10.CA and V15.CG2 other bump:2.19809 Ang Q10.CG and V15.CG2 other bump:3.27224 Ang Q10.CD and V15.CG2 self-bump: 1.31675 Ang V15.CA and V15.CB other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=376 Number of alignments=118 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIGAVNTIKIEDGK 1ccwA 71 :CKGLRQKCDEAGLEGILLYVGGN Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:1.51427 Ang L2.CD1 and E21.OE2 other bump:2.49188 Ang L2.CD1 and E21.CD other bump:2.19292 Ang I5.CG2 and K19.NZ other bump:2.27151 Ang I5.CG2 and K19.CE neighbor-bump: 3.04767 Ang V15.CG1 and N16.OD1 neighbor-bump: 2.89315 Ang V15.CG1 and N16.CA neighbor-bump: 2.43108 Ang V15.CB and N16.N neighbor-bump: 1.78862 Ang V15.CG1 and N16.N self-bump: 2.33528 Ang V15.CG1 and V15.C other bump:3.06379 Ang Q10.CA and V15.CG2 other bump:2.19809 Ang Q10.CG and V15.CG2 other bump:3.27224 Ang Q10.CD and V15.CG2 self-bump: 1.31675 Ang V15.CA and V15.CB other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=380 Number of alignments=119 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHP 1ccwA 2 :EKKTIVLGVIGSD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.31315 Ang I11.O and P14.CD other bump:3.12796 Ang G12.CA and P14.CD other bump:2.49042 Ang G12.C and P14.CD neighbor-bump: 2.159 Ang H13.N and P14.CD other bump:2.54446 Ang I11.O and P14.CG T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 15 :CHAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 62 clashes (null) has 62 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.85949 Ang G1.C and D27.OD1 other bump:1.34786 Ang S4.CA and F26.CZ other bump:1.9037 Ang S4.CB and F26.CZ other bump:1.83741 Ang S4.OG and F26.CZ other bump:2.81963 Ang S4.C and F26.CZ other bump:2.31646 Ang H3.O and F26.CZ other bump:2.19455 Ang H3.C and F26.CZ other bump:1.82076 Ang S4.N and F26.CZ other bump:2.49746 Ang S4.CA and F26.CE2 other bump:3.07124 Ang S4.CB and F26.CE2 other bump:2.27913 Ang E2.O and F26.CE2 other bump:2.55251 Ang S4.OG and F26.CE2 other bump:2.61426 Ang E2.C and F26.CE2 other bump:2.73425 Ang H3.N and F26.CE2 other bump:1.55853 Ang H3.O and F26.CE2 other bump:1.61934 Ang H3.C and F26.CE2 other bump:2.13753 Ang S4.N and F26.CE2 other bump:2.63438 Ang H3.CA and F26.CE2 other bump:2.22884 Ang S4.CA and F26.CE1 other bump:2.10405 Ang S4.CB and F26.CE1 other bump:1.76845 Ang S4.OG and F26.CE1 other bump:2.48373 Ang E2.O and F26.CD2 other bump:2.56143 Ang E2.C and F26.CD2 other bump:2.51295 Ang H3.O and F26.CD2 other bump:2.88479 Ang H3.C and F26.CD2 other bump:3.17432 Ang E2.CA and F26.CD2 other bump:2.45041 Ang S4.OG and F26.CD1 neighbor-bump: 2.35541 Ang A25.CB and F26.N self-bump: 2.18913 Ang A25.CB and A25.C other bump:3.05696 Ang Y23.CE2 and A25.CB self-bump: 1.27466 Ang A25.CA and A25.CB other bump:2.59165 Ang P7.CA and Y23.OH other bump:1.50721 Ang P7.CB and Y23.OH other bump:2.73637 Ang P7.CB and Y23.CZ other bump:2.02305 Ang F14.O and Y21.OH other bump:1.92953 Ang F14.CB and Y21.OH other bump:2.16742 Ang F14.C and Y21.OH other bump:1.99305 Ang F14.CA and Y21.OH other bump:2.44797 Ang L19.CD2 and Y21.OH other bump:2.3322 Ang F14.O and Y21.CZ other bump:1.76023 Ang F14.CB and Y21.CZ other bump:2.16154 Ang F14.C and Y21.CZ other bump:2.97082 Ang K15.N and Y21.CZ other bump:2.31184 Ang F14.CA and Y21.CZ other bump:2.70833 Ang L19.CB and Y21.CZ other bump:2.97593 Ang F14.CG and Y21.CZ other bump:2.63129 Ang K15.CA and Y21.CE2 other bump:2.06226 Ang F14.O and Y21.CE2 other bump:2.70186 Ang F14.CB and Y21.CE2 other bump:1.82098 Ang F14.C and Y21.CE2 other bump:2.06887 Ang K15.N and Y21.CE2 other bump:2.73532 Ang F14.CA and Y21.CE2 other bump:3.02859 Ang L19.CB and Y21.CE2 other bump:1.97573 Ang F14.CB and Y21.CE1 other bump:2.75797 Ang F14.CG and Y21.CE1 other bump:2.99175 Ang K15.CA and Y21.CD2 other bump:3.02171 Ang F14.C and Y21.CD2 other bump:2.72101 Ang K15.N and Y21.CD2 other bump:2.97463 Ang F14.CB and Y21.CD1 other bump:2.85394 Ang F5.CE2 and M9.SD other bump:2.91934 Ang S4.C and P7.CD neighbor-bump: 2.67106 Ang S6.N and P7.CD T0191 47 :NLKYVIDGAKALGIVGFNVT 1ccwA 42 :PQELFIKAAIETKADAILVS Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 Number of specific fragments= 3 total=383 Number of alignments=120 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKY 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEIDC Fragment has 46 clashes (null) has 46 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.7296 Ang I20.CG1 and Y29.OH other bump:2.1372 Ang I20.CD1 and Y29.OH other bump:2.34848 Ang I20.CA and Y29.OH other bump:1.02219 Ang I20.CB and Y29.OH other bump:2.0134 Ang I20.CG2 and Y29.OH other bump:2.88539 Ang E25.CD and Y29.OH other bump:2.83955 Ang E25.CB and Y29.OH other bump:1.9947 Ang I20.CG1 and Y29.CZ other bump:1.26144 Ang I20.CD1 and Y29.CZ other bump:2.21981 Ang I20.CB and Y29.CZ other bump:2.81968 Ang I20.CG2 and Y29.CZ other bump:2.03484 Ang E25.CG and Y29.CZ other bump:2.61809 Ang E25.CD and Y29.CZ other bump:2.33009 Ang E25.OE2 and Y29.CZ other bump:3.22042 Ang E25.CA and Y29.CZ other bump:2.56465 Ang E25.CB and Y29.CZ other bump:2.38737 Ang I20.CD1 and Y29.CE2 other bump:0.976539 Ang E25.CG and Y29.CE2 other bump:1.68014 Ang E25.CD and Y29.CE2 other bump:2.81396 Ang E25.OE1 and Y29.CE2 other bump:1.77419 Ang E25.OE2 and Y29.CE2 other bump:3.19475 Ang E25.CA and Y29.CE2 other bump:2.26473 Ang E25.CB and Y29.CE2 other bump:1.84816 Ang I20.CG1 and Y29.CE1 other bump:0.395008 Ang I20.CD1 and Y29.CE1 other bump:2.83092 Ang I20.CB and Y29.CE1 other bump:2.89169 Ang I20.CD1 and Y29.CD2 other bump:1.77077 Ang E25.CG and Y29.CD2 other bump:2.68113 Ang E25.CD and Y29.CD2 other bump:2.77653 Ang E25.OE2 and Y29.CD2 other bump:3.07789 Ang E25.CB and Y29.CD2 other bump:1.67684 Ang I20.CD1 and Y29.CD1 other bump:2.6718 Ang I20.CD1 and Y29.CG other bump:2.95033 Ang E25.CG and Y29.CG other bump:2.5212 Ang H22.NE2 and K28.NZ other bump:2.61287 Ang I24.CG2 and K28.NZ neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 78 :DEIDKDAQLIG 1ccwA 72 :KGLRQKCDEAG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues other bump:2.57996 Ang D7.O and I11.CD1 neighbor-bump: 2.53579 Ang D2.OD1 and E3.CG neighbor-bump: 1.98697 Ang D2.O and E3.CB neighbor-bump: 2.47808 Ang D2.C and E3.CB Number of specific fragments= 4 total=387 Number of alignments=121 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 T0191 96 :EDGK 1ccwA 83 :LEGI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues neighbor-bump: 2.41029 Ang D3.CB and G4.N self-bump: 2.19632 Ang D3.CB and D3.C self-bump: 1.2993 Ang D3.CA and D3.CB Number of specific fragments= 5 total=392 Number of alignments=122 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIGA 1ccwA 71 :CKGLRQKCDEAGL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.57996 Ang D8.O and I12.CD1 T0191 97 :DGK 1ccwA 84 :EGI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 5 total=397 Number of alignments=123 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 47 :NLKYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 42 :PQELFIKAAIETKADAILVSSLYGQGEID Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.67958 Ang H24.CE1 and K30.NZ other bump:0.909723 Ang H24.NE2 and K30.NZ other bump:2.08328 Ang H24.CD2 and K30.NZ other bump:2.7155 Ang H24.ND1 and K30.NZ other bump:2.94014 Ang H24.CE1 and K30.CE other bump:2.23172 Ang H24.NE2 and K30.CE neighbor-bump: 2.12248 Ang I22.C and P23.CD other bump:2.52547 Ang A10.CA and F18.CZ other bump:1.23613 Ang A10.CB and F18.CZ other bump:2.40966 Ang A10.CB and F18.CE2 other bump:2.79786 Ang A10.CA and F18.CE1 other bump:2.06026 Ang A10.CB and F18.CE1 other bump:2.64121 Ang I15.CD1 and F18.CE1 other bump:3.17981 Ang I15.CG2 and G17.C other bump:2.24929 Ang I15.CG2 and G17.O other bump:2.85723 Ang A10.CA and I15.CD1 other bump:2.47949 Ang N2.OD1 and Y5.CE1 other bump:2.47812 Ang N2.OD1 and Y5.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=401 Number of alignments=124 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLP 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQ Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:1.34786 Ang S3.CA and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:2.49746 Ang S3.CA and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C self-bump: 1.27466 Ang A24.CA and A24.CB other bump:3.05696 Ang Y22.CE2 and A24.CB other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.59165 Ang P6.CA and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMK 1ccwA 44 :ELFIKAAIETKADAILVSSLYGQGEID Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:1.67958 Ang H22.CE1 and K28.NZ other bump:0.909723 Ang H22.NE2 and K28.NZ other bump:2.08328 Ang H22.CD2 and K28.NZ other bump:2.7155 Ang H22.ND1 and K28.NZ other bump:2.94014 Ang H22.CE1 and K28.CE other bump:2.23172 Ang H22.NE2 and K28.CE neighbor-bump: 2.12248 Ang I20.C and P21.CD other bump:2.52547 Ang A8.CA and F16.CZ other bump:1.23613 Ang A8.CB and F16.CZ other bump:2.40966 Ang A8.CB and F16.CE2 other bump:2.79786 Ang A8.CA and F16.CE1 other bump:2.06026 Ang A8.CB and F16.CE1 other bump:2.64121 Ang I13.CD1 and F16.CE1 other bump:3.17981 Ang I13.CG2 and G15.C other bump:2.24929 Ang I13.CG2 and G15.O other bump:2.85723 Ang A8.CA and I13.CD1 T0191 77 :LDEIDKDAQLIG 1ccwA 71 :CKGLRQKCDEAG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.57996 Ang D8.O and I12.CD1 Number of specific fragments= 4 total=405 Number of alignments=125 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-local-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-local-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHP 1ccwA 2 :EKKTIVLGVIGSD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.31315 Ang I11.O and P14.CD other bump:3.12796 Ang G12.CA and P14.CD other bump:2.49042 Ang G12.C and P14.CD neighbor-bump: 2.159 Ang H13.N and P14.CD other bump:2.54446 Ang I11.O and P14.CG T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDVLPENL 1ccwA 15 :CHAVGNKILDHAFTNAGFNVVNIGVLSPQELF Fragment has 63 clashes (null) has 63 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 34 residues other bump:2.91193 Ang V28.CG1 and N32.CB other bump:2.85949 Ang G1.C and D27.OD1 other bump:1.34786 Ang S4.CA and F26.CZ other bump:1.9037 Ang S4.CB and F26.CZ other bump:1.83741 Ang S4.OG and F26.CZ other bump:2.81963 Ang S4.C and F26.CZ other bump:1.82076 Ang S4.N and F26.CZ other bump:2.31646 Ang H3.O and F26.CZ other bump:2.19455 Ang H3.C and F26.CZ other bump:2.49746 Ang S4.CA and F26.CE2 other bump:3.07124 Ang S4.CB and F26.CE2 other bump:2.27913 Ang E2.O and F26.CE2 other bump:2.55251 Ang S4.OG and F26.CE2 other bump:2.13753 Ang S4.N and F26.CE2 other bump:2.61426 Ang E2.C and F26.CE2 other bump:2.73425 Ang H3.N and F26.CE2 other bump:1.55853 Ang H3.O and F26.CE2 other bump:2.63438 Ang H3.CA and F26.CE2 other bump:1.61934 Ang H3.C and F26.CE2 other bump:2.22884 Ang S4.CA and F26.CE1 other bump:2.10405 Ang S4.CB and F26.CE1 other bump:1.76845 Ang S4.OG and F26.CE1 other bump:2.48373 Ang E2.O and F26.CD2 other bump:2.56143 Ang E2.C and F26.CD2 other bump:2.51295 Ang H3.O and F26.CD2 other bump:3.17432 Ang E2.CA and F26.CD2 other bump:2.88479 Ang H3.C and F26.CD2 other bump:2.45041 Ang S4.OG and F26.CD1 neighbor-bump: 2.35541 Ang A25.CB and F26.N self-bump: 2.18913 Ang A25.CB and A25.C other bump:3.05696 Ang Y23.CE2 and A25.CB self-bump: 1.27466 Ang A25.CA and A25.CB other bump:2.59165 Ang P7.CA and Y23.OH other bump:1.50721 Ang P7.CB and Y23.OH other bump:2.73637 Ang P7.CB and Y23.CZ other bump:2.02305 Ang F14.O and Y21.OH other bump:1.99305 Ang F14.CA and Y21.OH other bump:1.92953 Ang F14.CB and Y21.OH other bump:2.16742 Ang F14.C and Y21.OH other bump:2.44797 Ang L19.CD2 and Y21.OH other bump:2.97082 Ang K15.N and Y21.CZ other bump:2.3322 Ang F14.O and Y21.CZ other bump:2.70833 Ang L19.CB and Y21.CZ other bump:2.31184 Ang F14.CA and Y21.CZ other bump:1.76023 Ang F14.CB and Y21.CZ other bump:2.97593 Ang F14.CG and Y21.CZ other bump:2.16154 Ang F14.C and Y21.CZ other bump:2.06887 Ang K15.N and Y21.CE2 other bump:2.63129 Ang K15.CA and Y21.CE2 other bump:2.06226 Ang F14.O and Y21.CE2 other bump:3.02859 Ang L19.CB and Y21.CE2 other bump:2.73532 Ang F14.CA and Y21.CE2 other bump:2.70186 Ang F14.CB and Y21.CE2 other bump:1.82098 Ang F14.C and Y21.CE2 other bump:1.97573 Ang F14.CB and Y21.CE1 other bump:2.75797 Ang F14.CG and Y21.CE1 other bump:2.72101 Ang K15.N and Y21.CD2 other bump:2.99175 Ang K15.CA and Y21.CD2 other bump:3.02171 Ang F14.C and Y21.CD2 other bump:2.97463 Ang F14.CB and Y21.CD1 other bump:2.85394 Ang F5.CE2 and M9.SD other bump:2.91934 Ang S4.C and P7.CD neighbor-bump: 2.67106 Ang S6.N and P7.CD Number of specific fragments= 2 total=407 Number of alignments=126 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-local-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-local-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 5 :KTKVIGLIGHPV 1ccwA 4 :KTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.5046 Ang G10.C and P12.CD neighbor-bump: 2.29408 Ang H11.N and P12.CD other bump:3.11524 Ang G10.CA and P12.CD other bump:2.16029 Ang I9.O and P12.CD other bump:3.09989 Ang I9.C and P12.CD other bump:1.96482 Ang I9.O and P12.CG other bump:3.09699 Ang I9.C and P12.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPE 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQE Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD Number of specific fragments= 2 total=409 Number of alignments=127 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-simpleSW-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-simpleSW-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 5 :KTKVIGLIGHPV 1ccwA 4 :KTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.5046 Ang G10.C and P12.CD neighbor-bump: 2.29408 Ang H11.N and P12.CD other bump:3.11524 Ang G10.CA and P12.CD other bump:2.16029 Ang I9.O and P12.CD other bump:3.09989 Ang I9.C and P12.CD other bump:1.96482 Ang I9.O and P12.CG other bump:3.09699 Ang I9.C and P12.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVA 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIG Fragment has 35 clashes (null) has 35 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues neighbor-bump: 2.3554 Ang A24.CB and G25.N self-bump: 2.18912 Ang A24.CB and A24.C other bump:3.05697 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD Number of specific fragments= 2 total=411 Number of alignments=128 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-simpleSW-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-simpleSW-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHPV 1ccwA 2 :EKKTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.5046 Ang G12.C and P14.CD neighbor-bump: 2.29408 Ang H13.N and P14.CD other bump:3.11524 Ang G12.CA and P14.CD other bump:2.16029 Ang I11.O and P14.CD other bump:3.09989 Ang I11.C and P14.CD other bump:1.96482 Ang I11.O and P14.CG other bump:3.09699 Ang I11.C and P14.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVA 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIG Fragment has 35 clashes (null) has 35 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues neighbor-bump: 2.3554 Ang A24.CB and G25.N self-bump: 2.18912 Ang A24.CB and A24.C other bump:3.05697 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.3322 Ang F13.O and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD Number of specific fragments= 2 total=413 Number of alignments=129 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-vit-adpstyle1.pw.a2m.gz # 1ccwA read from T0191-1ccwA-vit-adpstyle1.pw.a2m.gz # found chain 1ccwA in template set T0191 3 :NAKTKVIGLIGHP 1ccwA 2 :EKKTIVLGVIGSD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.31315 Ang I11.O and P14.CD other bump:3.12796 Ang G12.CA and P14.CD other bump:2.49042 Ang G12.C and P14.CD neighbor-bump: 2.159 Ang H13.N and P14.CD other bump:2.54446 Ang I11.O and P14.CG T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDVLPENL 1ccwA 15 :CHAVGNKILDHAFTNAGFNVVNIGVLSPQELF Fragment has 63 clashes (null) has 63 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 34 residues other bump:2.91193 Ang V28.CG1 and N32.CB other bump:2.85949 Ang G1.C and D27.OD1 other bump:1.34786 Ang S4.CA and F26.CZ other bump:1.9037 Ang S4.CB and F26.CZ other bump:1.83741 Ang S4.OG and F26.CZ other bump:2.81963 Ang S4.C and F26.CZ other bump:1.82076 Ang S4.N and F26.CZ other bump:2.31646 Ang H3.O and F26.CZ other bump:2.19455 Ang H3.C and F26.CZ other bump:2.49746 Ang S4.CA and F26.CE2 other bump:3.07124 Ang S4.CB and F26.CE2 other bump:2.27913 Ang E2.O and F26.CE2 other bump:2.55251 Ang S4.OG and F26.CE2 other bump:2.13753 Ang S4.N and F26.CE2 other bump:2.61426 Ang E2.C and F26.CE2 other bump:2.73425 Ang H3.N and F26.CE2 other bump:1.55853 Ang H3.O and F26.CE2 other bump:2.63438 Ang H3.CA and F26.CE2 other bump:1.61934 Ang H3.C and F26.CE2 other bump:2.22884 Ang S4.CA and F26.CE1 other bump:2.10405 Ang S4.CB and F26.CE1 other bump:1.76845 Ang S4.OG and F26.CE1 other bump:2.48373 Ang E2.O and F26.CD2 other bump:2.56143 Ang E2.C and F26.CD2 other bump:2.51295 Ang H3.O and F26.CD2 other bump:3.17432 Ang E2.CA and F26.CD2 other bump:2.88479 Ang H3.C and F26.CD2 other bump:2.45041 Ang S4.OG and F26.CD1 neighbor-bump: 2.35541 Ang A25.CB and F26.N self-bump: 2.18913 Ang A25.CB and A25.C other bump:3.05696 Ang Y23.CE2 and A25.CB self-bump: 1.27466 Ang A25.CA and A25.CB other bump:2.59165 Ang P7.CA and Y23.OH other bump:1.50721 Ang P7.CB and Y23.OH other bump:2.73637 Ang P7.CB and Y23.CZ other bump:2.02305 Ang F14.O and Y21.OH other bump:1.99305 Ang F14.CA and Y21.OH other bump:1.92953 Ang F14.CB and Y21.OH other bump:2.16742 Ang F14.C and Y21.OH other bump:2.44797 Ang L19.CD2 and Y21.OH other bump:2.97082 Ang K15.N and Y21.CZ other bump:2.3322 Ang F14.O and Y21.CZ other bump:2.70833 Ang L19.CB and Y21.CZ other bump:2.31184 Ang F14.CA and Y21.CZ other bump:1.76023 Ang F14.CB and Y21.CZ other bump:2.97593 Ang F14.CG and Y21.CZ other bump:2.16154 Ang F14.C and Y21.CZ other bump:2.06887 Ang K15.N and Y21.CE2 other bump:2.63129 Ang K15.CA and Y21.CE2 other bump:2.06226 Ang F14.O and Y21.CE2 other bump:3.02859 Ang L19.CB and Y21.CE2 other bump:2.73532 Ang F14.CA and Y21.CE2 other bump:2.70186 Ang F14.CB and Y21.CE2 other bump:1.82098 Ang F14.C and Y21.CE2 other bump:1.97573 Ang F14.CB and Y21.CE1 other bump:2.75797 Ang F14.CG and Y21.CE1 other bump:2.72101 Ang K15.N and Y21.CD2 other bump:2.99175 Ang K15.CA and Y21.CD2 other bump:3.02171 Ang F14.C and Y21.CD2 other bump:2.97463 Ang F14.CB and Y21.CD1 other bump:2.85394 Ang F5.CE2 and M9.SD other bump:2.91934 Ang S4.C and P7.CD neighbor-bump: 2.67106 Ang S6.N and P7.CD Number of specific fragments= 2 total=415 Number of alignments=130 # Reading fragments from alignment file # T0191 read from T0191-1ccwA-vit-adpstyle5.pw.a2m.gz # 1ccwA read from T0191-1ccwA-vit-adpstyle5.pw.a2m.gz # found chain 1ccwA in template set T0191 5 :KTKVIGLIGHPV 1ccwA 4 :KTIVLGVIGSDC Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.5046 Ang G10.C and P12.CD neighbor-bump: 2.29408 Ang H11.N and P12.CD other bump:3.11524 Ang G10.CA and P12.CD other bump:2.16029 Ang I9.O and P12.CD other bump:3.09989 Ang I9.C and P12.CD other bump:1.96482 Ang I9.O and P12.CG other bump:3.09699 Ang I9.C and P12.CG T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPE 1ccwA 16 :HAVGNKILDHAFTNAGFNVVNIGVLSPQE Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:1.34786 Ang S3.CA and F25.CZ other bump:1.9037 Ang S3.CB and F25.CZ other bump:1.83741 Ang S3.OG and F25.CZ other bump:1.82076 Ang S3.N and F25.CZ other bump:2.81963 Ang S3.C and F25.CZ other bump:2.31646 Ang H2.O and F25.CZ other bump:2.19455 Ang H2.C and F25.CZ other bump:2.49746 Ang S3.CA and F25.CE2 other bump:3.07124 Ang S3.CB and F25.CE2 other bump:2.55251 Ang S3.OG and F25.CE2 other bump:2.27913 Ang G1.O and F25.CE2 other bump:2.13753 Ang S3.N and F25.CE2 other bump:1.55853 Ang H2.O and F25.CE2 other bump:2.61426 Ang G1.C and F25.CE2 other bump:2.73425 Ang H2.N and F25.CE2 other bump:1.61934 Ang H2.C and F25.CE2 other bump:2.63438 Ang H2.CA and F25.CE2 other bump:2.22884 Ang S3.CA and F25.CE1 other bump:2.10405 Ang S3.CB and F25.CE1 other bump:1.76845 Ang S3.OG and F25.CE1 other bump:2.48373 Ang G1.O and F25.CD2 other bump:2.51295 Ang H2.O and F25.CD2 other bump:2.56143 Ang G1.C and F25.CD2 other bump:2.88479 Ang H2.C and F25.CD2 other bump:2.45041 Ang S3.OG and F25.CD1 neighbor-bump: 2.35541 Ang A24.CB and F25.N self-bump: 2.18913 Ang A24.CB and A24.C other bump:3.05696 Ang Y22.CE2 and A24.CB self-bump: 1.27466 Ang A24.CA and A24.CB other bump:2.59165 Ang P6.CA and Y22.OH other bump:1.50721 Ang P6.CB and Y22.OH other bump:2.73637 Ang P6.CB and Y22.CZ other bump:2.02305 Ang F13.O and Y20.OH other bump:1.99305 Ang F13.CA and Y20.OH other bump:1.92953 Ang F13.CB and Y20.OH other bump:2.16742 Ang F13.C and Y20.OH other bump:2.44797 Ang L18.CD2 and Y20.OH other bump:2.97082 Ang K14.N and Y20.CZ other bump:2.3322 Ang F13.O and Y20.CZ other bump:2.70833 Ang L18.CB and Y20.CZ other bump:2.31184 Ang F13.CA and Y20.CZ other bump:1.76023 Ang F13.CB and Y20.CZ other bump:2.97593 Ang F13.CG and Y20.CZ other bump:2.16154 Ang F13.C and Y20.CZ other bump:2.63129 Ang K14.CA and Y20.CE2 other bump:2.06887 Ang K14.N and Y20.CE2 other bump:2.06226 Ang F13.O and Y20.CE2 other bump:3.02859 Ang L18.CB and Y20.CE2 other bump:2.73532 Ang F13.CA and Y20.CE2 other bump:2.70186 Ang F13.CB and Y20.CE2 other bump:1.82098 Ang F13.C and Y20.CE2 other bump:1.97573 Ang F13.CB and Y20.CE1 other bump:2.75797 Ang F13.CG and Y20.CE1 other bump:2.99175 Ang K14.CA and Y20.CD2 other bump:2.72101 Ang K14.N and Y20.CD2 other bump:3.02171 Ang F13.C and Y20.CD2 other bump:2.97463 Ang F13.CB and Y20.CD1 other bump:2.85394 Ang F4.CE2 and M8.SD other bump:2.91934 Ang S3.C and P6.CD neighbor-bump: 2.67106 Ang S5.N and P6.CD Number of specific fragments= 2 total=417 Number of alignments=131 # command:# Prefix for input files set to 1qnf/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1qnf-T0191-fssp-global-adpstyle1.pw.a2m.gz # 1qnf read from 1qnf-T0191-fssp-global-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIG 1qnf 2 :AAPILFWHR Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 16 :VEHSFSPIMH 1qnf 33 :GLFCLDPQIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues T0191 26 :NAAFKDKGLNYVYVAFDVLPENLKYV 1qnf 44 :SADMAPARVAYLQGCLQELQQRYQQA Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.61316 Ang V13.CG1 and F17.CZ other bump:2.79371 Ang V13.CG1 and F17.CE1 other bump:2.2961 Ang N2.OD1 and A4.CB other bump:2.59531 Ang N2.OD1 and A4.CA other bump:3.11697 Ang N2.CG and A4.N other bump:2.08472 Ang N2.OD1 and A4.N T0191 54 :GAKALGIVGF 1qnf 70 :GSRLLLLQGD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues T0191 64 :NVTIPHKIEIMKYLDE 1qnf 86 :QLAQQLQAEAVYWNQD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:2.52613 Ang I9.CG2 and I11.O neighbor-bump: 2.51689 Ang E10.O and I11.CG2 other bump:2.57701 Ang T4.CA and I9.CD1 other bump:2.87545 Ang T4.CB and I9.CD1 other bump:2.69706 Ang T4.OG1 and I9.CD1 T0191 80 :IDKDAQLIGAVNTIKIE 1qnf 107 :RDRDGQVAAALKTAGIR Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.97059 Ang V12.CG1 and I17.C other bump:2.23314 Ang V12.CG1 and I17.O T0191 97 :DGKA 1qnf 159 :QPKP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 104 :NTDGIGA 1qnf 239 :GTSGLSP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues other bump:2.76099 Ang D4.CB and I6.CD1 Number of specific fragments= 8 total=425 Number of alignments=132 # Reading fragments from alignment file # T0191 read from 1qnf-T0191-fssp-global-adpstyle5.pw.a2m.gz # 1qnf read from 1qnf-T0191-fssp-global-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIG 1qnf 2 :AAPILFWHR Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 15 :P 1qnf 13 :L Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues self-bump: 2.2449 Ang P2.CA and P2.CD T0191 16 :VEHSFSPIMH 1qnf 33 :GLFCLDPQIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues T0191 26 :NAAFKDKGLNYVYVAFDVLPENLKYV 1qnf 44 :SADMAPARVAYLQGCLQELQQRYQQA Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.61316 Ang V13.CG1 and F17.CZ other bump:2.79371 Ang V13.CG1 and F17.CE1 other bump:2.2961 Ang N2.OD1 and A4.CB other bump:2.59531 Ang N2.OD1 and A4.CA other bump:3.11697 Ang N2.CG and A4.N other bump:2.08472 Ang N2.OD1 and A4.N T0191 54 :GAKALGIVGF 1qnf 70 :GSRLLLLQGD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues T0191 64 :NVTIPHKIEIMKYL 1qnf 86 :QLAQQLQAEAVYWN Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.52613 Ang I9.CG2 and I11.O neighbor-bump: 2.51689 Ang E10.O and I11.CG2 other bump:2.87545 Ang T4.CB and I9.CD1 other bump:2.69706 Ang T4.OG1 and I9.CD1 other bump:2.57701 Ang T4.CA and I9.CD1 T0191 78 :DEIDKDAQLIGAVNTIKIE 1qnf 105 :YGRDRDGQVAAALKTAGIR Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:2.97059 Ang V14.CG1 and I19.C other bump:2.23314 Ang V14.CG1 and I19.O T0191 97 :DGKA 1qnf 159 :QPKP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 105 :TDGIGA 1qnf 470 :QLKAAI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues Number of specific fragments= 9 total=434 Number of alignments=133 # Reading fragments from alignment file # T0191 read from 1qnf-T0191-local-adpstyle1.pw.a2m.gz # 1qnf read from 1qnf-T0191-local-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 29 :FKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPH 1qnf 88 :AQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLW Fragment has 43 clashes (null) has 43 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:2.90287 Ang F14.CB and H42.CD2 other bump:3.11579 Ang F14.CD2 and P41.C other bump:2.5259 Ang V12.O and P41.CD other bump:3.08289 Ang F14.CZ and I40.C other bump:3.13144 Ang F14.CD2 and I40.C other bump:2.52592 Ang F14.CE2 and I40.C other bump:2.458 Ang F14.CZ and I40.O other bump:1.90823 Ang F14.CE2 and I40.O other bump:2.56072 Ang V12.CG2 and I40.CD1 other bump:2.87751 Ang F14.CZ and I40.CG2 other bump:2.94746 Ang F14.CD2 and I40.CG2 other bump:3.06895 Ang F14.CE2 and I40.CG2 other bump:2.62447 Ang F14.CG and I40.CG2 other bump:2.52785 Ang F14.CE1 and I40.CG2 other bump:2.38076 Ang F14.CD1 and I40.CG2 other bump:2.62587 Ang F14.CZ and I40.CB other bump:3.12368 Ang F14.CE2 and I40.CB other bump:2.72887 Ang F14.CE1 and I40.CB other bump:2.28759 Ang L31.CD1 and V38.CG2 other bump:2.74431 Ang Y9.CE2 and N37.ND2 other bump:2.10678 Ang Y9.CD2 and N37.ND2 other bump:2.95872 Ang Y9.CE2 and N37.CG other bump:2.59539 Ang Y9.CD2 and N37.CG other bump:2.70433 Ang Y9.CE2 and N37.CB other bump:2.37514 Ang Y9.CD2 and N37.CB other bump:2.33403 Ang V34.CG1 and F36.CE2 other bump:2.92238 Ang V34.O and F36.CE2 other bump:2.16522 Ang V34.CG1 and F36.CD2 other bump:3.05418 Ang N20.CA and Y23.CE2 other bump:2.88367 Ang N20.O and Y23.CE2 other bump:2.89124 Ang N20.CA and Y23.CD2 other bump:2.53449 Ang N20.O and Y23.CD2 other bump:3.05863 Ang N20.C and Y23.CD2 other bump:2.03014 Ang D15.OD2 and N20.ND2 other bump:2.8844 Ang F2.CG and V10.CG2 other bump:2.14112 Ang F2.CD2 and V10.CG2 other bump:1.93996 Ang F2.CE2 and V10.CG2 other bump:2.57845 Ang F2.CZ and V10.CG2 other bump:2.50955 Ang F2.CE2 and V10.CG1 other bump:2.38361 Ang F2.CZ and V10.CG1 other bump:2.58474 Ang F2.CE2 and V10.CB neighbor-bump: 2.55087 Ang N8.OD1 and Y9.CD1 other bump:2.44249 Ang F2.CD1 and L7.CD1 Number of specific fragments= 1 total=435 Number of alignments=134 # Reading fragments from alignment file # T0191 read from 1qnf-T0191-local-adpstyle5.pw.a2m.gz # 1qnf read from 1qnf-T0191-local-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMK 1qnf 87 :LAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHS Fragment has 56 clashes (null) has 56 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 50 residues other bump:1.45989 Ang H43.ND1 and K49.NZ other bump:2.02603 Ang H43.CE1 and K49.NZ other bump:1.25319 Ang H43.ND1 and K49.CE other bump:2.28183 Ang H43.CE1 and K49.CE other bump:1.79648 Ang H43.CG and K49.CE other bump:2.39671 Ang H43.CB and K49.CE other bump:2.81626 Ang H43.CD2 and K49.CE other bump:2.07381 Ang H43.ND1 and K49.CD other bump:2.34038 Ang H43.CE1 and K49.CD other bump:2.23613 Ang H43.CG and K49.CD other bump:2.56434 Ang H43.CD2 and K49.CD other bump:2.59116 Ang H43.CG and K49.CG other bump:2.9646 Ang H43.CB and K49.CG other bump:2.76129 Ang H43.CD2 and K49.CG other bump:3.11579 Ang F15.CD2 and P42.C other bump:2.5259 Ang V13.O and P42.CD other bump:3.08289 Ang F15.CZ and I41.C other bump:3.13144 Ang F15.CD2 and I41.C other bump:2.52592 Ang F15.CE2 and I41.C other bump:2.458 Ang F15.CZ and I41.O other bump:1.90823 Ang F15.CE2 and I41.O other bump:2.56072 Ang V13.CG2 and I41.CD1 other bump:2.87751 Ang F15.CZ and I41.CG2 other bump:2.62447 Ang F15.CG and I41.CG2 other bump:2.94746 Ang F15.CD2 and I41.CG2 other bump:3.06895 Ang F15.CE2 and I41.CG2 other bump:2.52785 Ang F15.CE1 and I41.CG2 other bump:2.38076 Ang F15.CD1 and I41.CG2 other bump:2.62587 Ang F15.CZ and I41.CB other bump:3.12368 Ang F15.CE2 and I41.CB other bump:2.72887 Ang F15.CE1 and I41.CB other bump:2.28759 Ang L32.CD1 and V39.CG2 other bump:2.10678 Ang Y10.CD2 and N38.ND2 other bump:2.74431 Ang Y10.CE2 and N38.ND2 other bump:2.59539 Ang Y10.CD2 and N38.CG other bump:2.95872 Ang Y10.CE2 and N38.CG other bump:2.37514 Ang Y10.CD2 and N38.CB other bump:2.70433 Ang Y10.CE2 and N38.CB other bump:2.92238 Ang V35.O and F37.CE2 other bump:2.33403 Ang V35.CG1 and F37.CE2 other bump:2.16522 Ang V35.CG1 and F37.CD2 other bump:3.05418 Ang N21.CA and Y24.CE2 other bump:2.88367 Ang N21.O and Y24.CE2 other bump:2.89124 Ang N21.CA and Y24.CD2 other bump:2.53449 Ang N21.O and Y24.CD2 other bump:3.05863 Ang N21.C and Y24.CD2 other bump:2.03014 Ang D16.OD2 and N21.ND2 other bump:2.8844 Ang F3.CG and V11.CG2 other bump:2.14112 Ang F3.CD2 and V11.CG2 other bump:1.93996 Ang F3.CE2 and V11.CG2 other bump:2.57845 Ang F3.CZ and V11.CG2 other bump:2.50954 Ang F3.CE2 and V11.CG1 other bump:2.38361 Ang F3.CZ and V11.CG1 other bump:2.58474 Ang F3.CE2 and V11.CB neighbor-bump: 2.55087 Ang N9.OD1 and Y10.CD1 other bump:2.44249 Ang F3.CD1 and L8.CD1 Number of specific fragments= 1 total=436 Number of alignments=135 # Reading fragments from alignment file # T0191 read from 1qnf-T0191-vit-adpstyle1.pw.a2m.gz # 1qnf read from 1qnf-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 29 :FKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPH 1qnf 88 :AQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLW Fragment has 43 clashes (null) has 43 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:2.90287 Ang F14.CB and H42.CD2 other bump:3.11579 Ang F14.CD2 and P41.C other bump:2.5259 Ang V12.O and P41.CD other bump:3.08289 Ang F14.CZ and I40.C other bump:3.13144 Ang F14.CD2 and I40.C other bump:2.52592 Ang F14.CE2 and I40.C other bump:2.458 Ang F14.CZ and I40.O other bump:1.90823 Ang F14.CE2 and I40.O other bump:2.56072 Ang V12.CG2 and I40.CD1 other bump:2.87751 Ang F14.CZ and I40.CG2 other bump:2.94746 Ang F14.CD2 and I40.CG2 other bump:3.06895 Ang F14.CE2 and I40.CG2 other bump:2.62447 Ang F14.CG and I40.CG2 other bump:2.52785 Ang F14.CE1 and I40.CG2 other bump:2.38076 Ang F14.CD1 and I40.CG2 other bump:2.62587 Ang F14.CZ and I40.CB other bump:3.12368 Ang F14.CE2 and I40.CB other bump:2.72887 Ang F14.CE1 and I40.CB other bump:2.28759 Ang L31.CD1 and V38.CG2 other bump:2.74431 Ang Y9.CE2 and N37.ND2 other bump:2.10678 Ang Y9.CD2 and N37.ND2 other bump:2.95872 Ang Y9.CE2 and N37.CG other bump:2.59539 Ang Y9.CD2 and N37.CG other bump:2.70433 Ang Y9.CE2 and N37.CB other bump:2.37514 Ang Y9.CD2 and N37.CB other bump:2.33403 Ang V34.CG1 and F36.CE2 other bump:2.92238 Ang V34.O and F36.CE2 other bump:2.16522 Ang V34.CG1 and F36.CD2 other bump:3.05418 Ang N20.CA and Y23.CE2 other bump:2.88367 Ang N20.O and Y23.CE2 other bump:2.89124 Ang N20.CA and Y23.CD2 other bump:2.53449 Ang N20.O and Y23.CD2 other bump:3.05863 Ang N20.C and Y23.CD2 other bump:2.03014 Ang D15.OD2 and N20.ND2 other bump:2.8844 Ang F2.CG and V10.CG2 other bump:2.14112 Ang F2.CD2 and V10.CG2 other bump:1.93996 Ang F2.CE2 and V10.CG2 other bump:2.57845 Ang F2.CZ and V10.CG2 other bump:2.50955 Ang F2.CE2 and V10.CG1 other bump:2.38361 Ang F2.CZ and V10.CG1 other bump:2.58474 Ang F2.CE2 and V10.CB neighbor-bump: 2.55087 Ang N8.OD1 and Y9.CD1 other bump:2.44249 Ang F2.CD1 and L7.CD1 Number of specific fragments= 1 total=437 Number of alignments=136 # Reading fragments from alignment file # T0191 read from 1qnf-T0191-vit-adpstyle5.pw.a2m.gz # 1qnf read from 1qnf-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMK 1qnf 87 :LAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHS Fragment has 56 clashes (null) has 56 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 50 residues other bump:1.45989 Ang H43.ND1 and K49.NZ other bump:2.02603 Ang H43.CE1 and K49.NZ other bump:1.25319 Ang H43.ND1 and K49.CE other bump:2.28183 Ang H43.CE1 and K49.CE other bump:1.79648 Ang H43.CG and K49.CE other bump:2.39671 Ang H43.CB and K49.CE other bump:2.81626 Ang H43.CD2 and K49.CE other bump:2.07381 Ang H43.ND1 and K49.CD other bump:2.34038 Ang H43.CE1 and K49.CD other bump:2.23613 Ang H43.CG and K49.CD other bump:2.56434 Ang H43.CD2 and K49.CD other bump:2.59116 Ang H43.CG and K49.CG other bump:2.9646 Ang H43.CB and K49.CG other bump:2.76129 Ang H43.CD2 and K49.CG other bump:3.11579 Ang F15.CD2 and P42.C other bump:2.5259 Ang V13.O and P42.CD other bump:3.08289 Ang F15.CZ and I41.C other bump:3.13144 Ang F15.CD2 and I41.C other bump:2.52592 Ang F15.CE2 and I41.C other bump:2.458 Ang F15.CZ and I41.O other bump:1.90823 Ang F15.CE2 and I41.O other bump:2.56072 Ang V13.CG2 and I41.CD1 other bump:2.87751 Ang F15.CZ and I41.CG2 other bump:2.62447 Ang F15.CG and I41.CG2 other bump:2.94746 Ang F15.CD2 and I41.CG2 other bump:3.06895 Ang F15.CE2 and I41.CG2 other bump:2.52785 Ang F15.CE1 and I41.CG2 other bump:2.38076 Ang F15.CD1 and I41.CG2 other bump:2.62587 Ang F15.CZ and I41.CB other bump:3.12368 Ang F15.CE2 and I41.CB other bump:2.72887 Ang F15.CE1 and I41.CB other bump:2.28759 Ang L32.CD1 and V39.CG2 other bump:2.10678 Ang Y10.CD2 and N38.ND2 other bump:2.74431 Ang Y10.CE2 and N38.ND2 other bump:2.59539 Ang Y10.CD2 and N38.CG other bump:2.95872 Ang Y10.CE2 and N38.CG other bump:2.37514 Ang Y10.CD2 and N38.CB other bump:2.70433 Ang Y10.CE2 and N38.CB other bump:2.92238 Ang V35.O and F37.CE2 other bump:2.33403 Ang V35.CG1 and F37.CE2 other bump:2.16522 Ang V35.CG1 and F37.CD2 other bump:3.05418 Ang N21.CA and Y24.CE2 other bump:2.88367 Ang N21.O and Y24.CE2 other bump:2.89124 Ang N21.CA and Y24.CD2 other bump:2.53449 Ang N21.O and Y24.CD2 other bump:3.05863 Ang N21.C and Y24.CD2 other bump:2.03014 Ang D16.OD2 and N21.ND2 other bump:2.8844 Ang F3.CG and V11.CG2 other bump:2.14112 Ang F3.CD2 and V11.CG2 other bump:1.93996 Ang F3.CE2 and V11.CG2 other bump:2.57845 Ang F3.CZ and V11.CG2 other bump:2.50954 Ang F3.CE2 and V11.CG1 other bump:2.38361 Ang F3.CZ and V11.CG1 other bump:2.58474 Ang F3.CE2 and V11.CB neighbor-bump: 2.55087 Ang N9.OD1 and Y10.CD1 other bump:2.44249 Ang F3.CD1 and L8.CD1 Number of specific fragments= 1 total=438 Number of alignments=137 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIGHPVEHSFS 1qnf 2 :AAPILFWHRRDLRLSDN Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.9605 Ang I9.CG1 and V13.CG2 other bump:2.40865 Ang I9.CD1 and V13.CG2 other bump:3.09421 Ang I9.CD1 and V13.CA neighbor-bump: 2.23252 Ang H11.N and P12.CD neighbor-bump: 1.70559 Ang H11.O and P12.CD neighbor-bump: 1.84181 Ang H11.CA and P12.CD neighbor-bump: 2.60452 Ang H11.CB and P12.CD neighbor-bump: 0.957255 Ang H11.C and P12.CD neighbor-bump: 2.15771 Ang H11.O and P12.CG neighbor-bump: 2.18665 Ang H11.C and P12.CG neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 25 :HNAAFKDKGLNYVYVAFDVLPENL 1qnf 19 :IGLAAARAQSAQLIGLFCLDPQIL Fragment has 15 clashes (null) has 15 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.43401 Ang V20.CG1 and L25.CD1 other bump:2.24959 Ang Y13.CE1 and Y15.OH other bump:2.19762 Ang Y13.CZ and Y15.OH other bump:3.00208 Ang Y13.CE2 and Y15.OH other bump:2.85307 Ang L11.CD2 and Y13.C other bump:2.15589 Ang L11.CD2 and Y13.O other bump:2.27812 Ang H2.CE1 and F6.CZ other bump:2.32562 Ang H2.NE2 and F6.CZ other bump:2.87298 Ang H2.CG and F6.CE1 other bump:2.81058 Ang H2.CD2 and F6.CE1 other bump:1.30514 Ang H2.CE1 and F6.CE1 other bump:1.94223 Ang H2.NE2 and F6.CE1 other bump:2.07064 Ang H2.ND1 and F6.CE1 other bump:2.35525 Ang H2.CE1 and F6.CD1 other bump:2.4803 Ang H2.ND1 and F6.CD1 T0191 49 :KYVIDGAKA 1qnf 49 :PARVAYLQG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 76 :YLDEIDKDAQLIGAVNTIKIED 1qnf 58 :CLQELQQRYQQAGSRLLLLQGD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues Number of specific fragments= 4 total=442 Number of alignments=138 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 1 :M 1qnf 1 :M Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues T0191 5 :KTKVIGLIGHP 1qnf 2 :AAPILFWHRRD Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues other bump:3.09421 Ang I9.CD1 and G13.CA neighbor-bump: 2.60452 Ang H11.CB and P12.CD neighbor-bump: 1.70558 Ang H11.O and P12.CD neighbor-bump: 0.957254 Ang H11.C and P12.CD neighbor-bump: 2.23253 Ang H11.N and P12.CD neighbor-bump: 1.84181 Ang H11.CA and P12.CD neighbor-bump: 2.1577 Ang H11.O and P12.CG neighbor-bump: 2.18666 Ang H11.C and P12.CG neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 18 :HSFSPIM 1qnf 13 :LRLSDNI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues neighbor-bump: 2.62956 Ang S5.CB and P6.CD neighbor-bump: 1.94431 Ang S5.C and P6.CD self-bump: 2.21653 Ang P6.CA and P6.CD T0191 26 :NAAFKDKGLNYVYVAFDVLPEN 1qnf 20 :GLAAARAQSAQLIGLFCLDPQI Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.24959 Ang Y12.CE1 and Y14.OH other bump:2.19762 Ang Y12.CZ and Y14.OH other bump:3.00208 Ang Y12.CE2 and Y14.OH other bump:2.85307 Ang L10.CD2 and Y12.C other bump:2.15589 Ang L10.CD2 and Y12.O T0191 55 :AKALGI 1qnf 42 :LQSADM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 67 :IPHKIEIM 1qnf 48 :APARVAYL Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:2.76776 Ang H4.NE2 and I8.CD1 other bump:2.381 Ang P3.O and E7.OE2 other bump:0.729307 Ang P3.O and E7.OE1 other bump:1.77994 Ang P3.C and E7.OE1 other bump:2.6919 Ang H4.CA and E7.OE1 other bump:1.74366 Ang P3.O and E7.CD other bump:2.69734 Ang P3.C and E7.CD T0191 75 :KYLDEIDKDAQLIGAVNTIKIED 1qnf 57 :GCLQELQQRYQQAGSRLLLLQGD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues Number of specific fragments= 7 total=449 Number of alignments=139 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRA Fragment has 46 clashes (null) has 46 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 46 residues other bump:2.53727 Ang L38.CD1 and V45.CG2 other bump:2.74431 Ang Y16.CE2 and N44.ND2 other bump:2.10678 Ang Y16.CD2 and N44.ND2 other bump:2.95872 Ang Y16.CE2 and N44.CG other bump:2.59539 Ang Y16.CD2 and N44.CG other bump:2.70433 Ang Y16.CE2 and N44.CB other bump:2.37514 Ang Y16.CD2 and N44.CB other bump:2.33403 Ang V41.CG1 and F43.CE2 other bump:2.92238 Ang V41.O and F43.CE2 other bump:2.16522 Ang V41.CG1 and F43.CD2 other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=451 Number of alignments=140 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALK Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=453 Number of alignments=141 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 7 :KVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1qnf 2 :AAPILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLD Fragment has 44 clashes (null) has 44 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 39 residues other bump:3.1774 Ang V34.CG1 and F36.CZ other bump:2.53803 Ang V34.CG1 and F36.CE2 other bump:3.08844 Ang V34.CG1 and F36.CD2 other bump:3.0374 Ang Y31.CE2 and Y33.CZ other bump:3.03843 Ang F15.CE1 and Y33.CZ other bump:2.77884 Ang F15.CE1 and Y33.CE2 other bump:2.48858 Ang Y31.CE2 and Y33.CE1 other bump:2.70243 Ang N21.OD1 and Y33.CE1 other bump:2.96132 Ang Y31.CE2 and Y33.CD1 other bump:2.51241 Ang I7.CG2 and Y33.CD1 other bump:2.83854 Ang H9.CE1 and Y33.CD1 other bump:2.72202 Ang I7.CA and Y31.OH other bump:1.22788 Ang I7.CB and Y31.OH other bump:1.7558 Ang I7.CG1 and Y31.OH other bump:1.48154 Ang I7.CG2 and Y31.OH other bump:1.83065 Ang I7.CD1 and Y31.OH other bump:2.12456 Ang I7.CB and Y31.CZ other bump:3.07337 Ang I7.CG1 and Y31.CZ other bump:2.00088 Ang I7.CG2 and Y31.CZ other bump:2.45887 Ang N21.OD1 and Y31.CE2 other bump:2.50727 Ang I7.CG2 and Y31.CE2 other bump:2.64608 Ang I7.CB and Y31.CE1 other bump:2.93084 Ang H20.ND1 and F24.CZ other bump:1.89723 Ang H20.CE1 and F24.CZ other bump:2.50132 Ang H20.NE2 and F24.CZ other bump:2.76009 Ang H20.CG and F24.CE1 other bump:2.2463 Ang H20.ND1 and F24.CE1 other bump:1.47955 Ang H20.CE1 and F24.CE1 other bump:2.46743 Ang H20.CD2 and F24.CE1 other bump:1.64221 Ang H20.NE2 and F24.CE1 other bump:3.18261 Ang H20.ND1 and F24.CD1 other bump:2.79798 Ang H20.CE1 and F24.CD1 other bump:2.64465 Ang H20.O and F24.CD1 other bump:2.67028 Ang H20.NE2 and F24.CD1 other bump:3.05309 Ang I7.CD1 and N21.CA other bump:3.02773 Ang I7.CG1 and H20.NE2 other bump:2.74877 Ang I7.CG1 and H20.CD2 other bump:2.91849 Ang I7.CD1 and H20.CD2 neighbor-bump: 2.62956 Ang S16.CB and P17.CD neighbor-bump: 1.94431 Ang S16.C and P17.CD self-bump: 2.21653 Ang P17.CA and P17.CD neighbor-bump: 2.44726 Ang K2.CB and V3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 44 :LPENLKYVIDGAKA 1qnf 44 :SADMAPARVAYLQG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues T0191 76 :YLDEIDKDAQLIGAVNTIKIEDGK 1qnf 58 :CLQELQQRYQQAGSRLLLLQGDPQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues Number of specific fragments= 3 total=456 Number of alignments=142 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 1 :MIN 1qnf 1 :MAA Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues neighbor-bump: 3.10236 Ang I2.CG2 and N3.ND2 neighbor-bump: 3.10008 Ang I2.CG2 and N3.CA neighbor-bump: 1.94172 Ang I2.CG2 and N3.N self-bump: 2.38264 Ang I2.CG2 and I2.C self-bump: 1.31407 Ang I2.CA and I2.CB T0191 9 :IGLIGHPVEHSFSPIMHNAAFKDKGLNYV 1qnf 4 :PILFWHRRDLRLSDNIGLAAARAQSAQLI Fragment has 32 clashes (null) has 32 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:2.72202 Ang I5.CA and Y29.OH other bump:1.22788 Ang I5.CB and Y29.OH other bump:1.7558 Ang I5.CG1 and Y29.OH other bump:1.83065 Ang I5.CD1 and Y29.OH other bump:1.48154 Ang I5.CG2 and Y29.OH other bump:2.12456 Ang I5.CB and Y29.CZ other bump:3.07337 Ang I5.CG1 and Y29.CZ other bump:2.00088 Ang I5.CG2 and Y29.CZ other bump:2.45887 Ang N19.OD1 and Y29.CE2 other bump:2.50727 Ang I5.CG2 and Y29.CE2 other bump:2.64608 Ang I5.CB and Y29.CE1 other bump:2.66993 Ang I2.CG2 and N28.ND2 other bump:2.92056 Ang I2.CG2 and N28.CG other bump:2.93084 Ang H18.ND1 and F22.CZ other bump:1.89723 Ang H18.CE1 and F22.CZ other bump:2.50132 Ang H18.NE2 and F22.CZ other bump:2.2463 Ang H18.ND1 and F22.CE1 other bump:1.47955 Ang H18.CE1 and F22.CE1 other bump:1.64221 Ang H18.NE2 and F22.CE1 other bump:2.76009 Ang H18.CG and F22.CE1 other bump:2.46743 Ang H18.CD2 and F22.CE1 other bump:3.18261 Ang H18.ND1 and F22.CD1 other bump:2.79798 Ang H18.CE1 and F22.CD1 other bump:2.67028 Ang H18.NE2 and F22.CD1 other bump:2.64465 Ang H18.O and F22.CD1 other bump:3.05309 Ang I5.CD1 and N19.CA other bump:3.02773 Ang I5.CG1 and H18.NE2 other bump:2.74877 Ang I5.CG1 and H18.CD2 other bump:2.91849 Ang I5.CD1 and H18.CD2 neighbor-bump: 2.62956 Ang S14.CB and P15.CD neighbor-bump: 1.94431 Ang S14.C and P15.CD self-bump: 2.21653 Ang P15.CA and P15.CD T0191 39 :VAFDVLPENLK 1qnf 33 :GLFCLDPQILQ Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues other bump:2.43401 Ang V6.CG1 and L11.CD1 T0191 57 :ALGI 1qnf 44 :SADM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 67 :IPHKIEIM 1qnf 48 :APARVAYL Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:2.76776 Ang H4.NE2 and I8.CD1 other bump:2.381 Ang P3.O and E7.OE2 other bump:0.729307 Ang P3.O and E7.OE1 other bump:1.77994 Ang P3.C and E7.OE1 other bump:2.6919 Ang H4.CA and E7.OE1 other bump:1.74366 Ang P3.O and E7.CD other bump:2.69734 Ang P3.C and E7.CD T0191 75 :KYLDEIDKDAQLIGAVNTIKIED 1qnf 57 :GCLQELQQRYQQAGSRLLLLQGD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues Number of specific fragments= 6 total=462 Number of alignments=143 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIGHP 1qnf 70 :GSRLLLLQGDP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues neighbor-bump: 2.34716 Ang T3.CB and K4.N neighbor-bump: 2.19486 Ang T3.OG1 and K4.N neighbor-bump: 2.51718 Ang G1.O and K2.CG T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKAL 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAAL Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 39 residues other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=464 Number of alignments=144 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKA 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAA Fragment has 34 clashes (null) has 34 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=466 Number of alignments=145 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIGHPVEHSFS 1qnf 2 :AAPILFWHRRDLRLSDN Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.9605 Ang I9.CG1 and V13.CG2 other bump:2.40865 Ang I9.CD1 and V13.CG2 other bump:3.09421 Ang I9.CD1 and V13.CA neighbor-bump: 2.23252 Ang H11.N and P12.CD neighbor-bump: 1.70559 Ang H11.O and P12.CD neighbor-bump: 1.84181 Ang H11.CA and P12.CD neighbor-bump: 2.60452 Ang H11.CB and P12.CD neighbor-bump: 0.957255 Ang H11.C and P12.CD neighbor-bump: 2.15771 Ang H11.O and P12.CG neighbor-bump: 2.18665 Ang H11.C and P12.CG neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 25 :HNAAFKDKGLNYVYVAFDVLPENL 1qnf 19 :IGLAAARAQSAQLIGLFCLDPQIL Fragment has 15 clashes (null) has 15 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.43401 Ang V20.CG1 and L25.CD1 other bump:2.24959 Ang Y13.CE1 and Y15.OH other bump:2.19762 Ang Y13.CZ and Y15.OH other bump:3.00208 Ang Y13.CE2 and Y15.OH other bump:2.85307 Ang L11.CD2 and Y13.C other bump:2.15589 Ang L11.CD2 and Y13.O other bump:2.27812 Ang H2.CE1 and F6.CZ other bump:2.32562 Ang H2.NE2 and F6.CZ other bump:2.87298 Ang H2.CG and F6.CE1 other bump:2.81058 Ang H2.CD2 and F6.CE1 other bump:1.30514 Ang H2.CE1 and F6.CE1 other bump:1.94223 Ang H2.NE2 and F6.CE1 other bump:2.07064 Ang H2.ND1 and F6.CE1 other bump:2.35525 Ang H2.CE1 and F6.CD1 other bump:2.4803 Ang H2.ND1 and F6.CD1 T0191 49 :KYVIDGAKA 1qnf 49 :PARVAYLQG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 76 :YLDEIDKDAQLIGA 1qnf 58 :CLQELQQRYQQAGS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues Number of specific fragments= 4 total=470 Number of alignments=146 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 5 :KTKVIGLIGHPVEHSFS 1qnf 2 :AAPILFWHRRDLRLSDN Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.9605 Ang I9.CG1 and V13.CG2 other bump:2.40865 Ang I9.CD1 and V13.CG2 other bump:3.09421 Ang I9.CD1 and V13.CA neighbor-bump: 2.23252 Ang H11.N and P12.CD neighbor-bump: 1.70559 Ang H11.O and P12.CD neighbor-bump: 1.84181 Ang H11.CA and P12.CD neighbor-bump: 2.60452 Ang H11.CB and P12.CD neighbor-bump: 0.957255 Ang H11.C and P12.CD neighbor-bump: 2.15771 Ang H11.O and P12.CG neighbor-bump: 2.18665 Ang H11.C and P12.CG neighbor-bump: 2.44726 Ang K2.CB and T3.N self-bump: 2.21089 Ang K2.CB and K2.C self-bump: 1.28668 Ang K2.CA and K2.CB T0191 25 :HNAAFKDKGLNYVYVAFDVLPEN 1qnf 19 :IGLAAARAQSAQLIGLFCLDPQI Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.24959 Ang Y13.CE1 and Y15.OH other bump:2.19762 Ang Y13.CZ and Y15.OH other bump:3.00208 Ang Y13.CE2 and Y15.OH other bump:2.85307 Ang L11.CD2 and Y13.C other bump:2.15589 Ang L11.CD2 and Y13.O other bump:2.27812 Ang H2.CE1 and F6.CZ other bump:2.32562 Ang H2.NE2 and F6.CZ other bump:1.30514 Ang H2.CE1 and F6.CE1 other bump:2.87298 Ang H2.CG and F6.CE1 other bump:2.81058 Ang H2.CD2 and F6.CE1 other bump:1.94223 Ang H2.NE2 and F6.CE1 other bump:2.07064 Ang H2.ND1 and F6.CE1 other bump:2.35525 Ang H2.CE1 and F6.CD1 other bump:2.4803 Ang H2.ND1 and F6.CD1 T0191 55 :AKALGI 1qnf 42 :LQSADM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 67 :IPHKIEIMK 1qnf 48 :APARVAYLQ Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.76776 Ang H4.NE2 and I8.CD1 other bump:2.381 Ang P3.O and E7.OE2 other bump:0.729307 Ang P3.O and E7.OE1 other bump:1.77994 Ang P3.C and E7.OE1 other bump:2.6919 Ang H4.CA and E7.OE1 other bump:1.74366 Ang P3.O and E7.CD other bump:2.69734 Ang P3.C and E7.CD T0191 76 :YLDEIDKDAQLIGAV 1qnf 58 :CLQELQQRYQQAGSR Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues Number of specific fragments= 5 total=475 Number of alignments=147 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLP 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEP Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 T0191 46 :ENLKYVIDGAKALGIVGFNV 1qnf 108 :DRDGQVAAALKTAGIRAVQL Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.97158 Ang F19.CD1 and V21.CG1 other bump:2.08799 Ang F19.CE1 and V21.CG1 other bump:2.99565 Ang F19.CZ and V21.CG1 Number of specific fragments= 3 total=478 Number of alignments=148 # Reading fragments from alignment file # T0191 read from T0191-1qnf-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLP 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEP Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 T0191 46 :ENLKYVIDGAKALGIVGFNV 1qnf 108 :DRDGQVAAALKTAGIRAVQL Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.97158 Ang F19.CD1 and V21.CG1 other bump:2.08799 Ang F19.CE1 and V21.CG1 other bump:2.99565 Ang F19.CZ and V21.CG1 Number of specific fragments= 3 total=481 Number of alignments=149 # Reading fragments from alignment file # T0191 read from T0191-1qnf-local-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-local-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGF 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGI Fragment has 40 clashes (null) has 40 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.85794 Ang L14.O and F43.CE2 other bump:2.72002 Ang V41.CG1 and F43.CE1 other bump:2.62038 Ang L14.O and F43.CD2 other bump:2.37464 Ang V41.CG1 and F43.CD1 other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=483 Number of alignments=150 # Reading fragments from alignment file # T0191 read from T0191-1qnf-local-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-local-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGF 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGI Fragment has 40 clashes (null) has 40 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.85794 Ang L14.O and F43.CE2 other bump:2.72002 Ang V41.CG1 and F43.CE1 other bump:2.62038 Ang L14.O and F43.CD2 other bump:2.37464 Ang V41.CG1 and F43.CD1 other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=485 Number of alignments=151 # Reading fragments from alignment file # T0191 read from T0191-1qnf-simpleSW-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-simpleSW-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 81 :DKDAQLIGAVNTIKIE 1qnf 108 :DRDGQVAAALKTAGIR Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:2.97059 Ang V11.CG1 and I16.C other bump:2.23314 Ang V11.CG1 and I16.O Number of specific fragments= 1 total=486 # Reading fragments from alignment file # T0191 read from T0191-1qnf-simpleSW-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-simpleSW-adpstyle5.pw.a2m.gz # found chain 1qnf in training set Number of specific fragments= 0 total=486 # Reading fragments from alignment file # T0191 read from T0191-1qnf-vit-adpstyle1.pw.a2m.gz # 1qnf read from T0191-1qnf-vit-adpstyle1.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGF 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGI Fragment has 40 clashes (null) has 40 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.85794 Ang L14.O and F43.CE2 other bump:2.72002 Ang V41.CG1 and F43.CE1 other bump:2.62038 Ang L14.O and F43.CD2 other bump:2.37464 Ang V41.CG1 and F43.CD1 other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=488 Number of alignments=152 # Reading fragments from alignment file # T0191 read from T0191-1qnf-vit-adpstyle5.pw.a2m.gz # 1qnf read from T0191-1qnf-vit-adpstyle5.pw.a2m.gz # found chain 1qnf in training set T0191 6 :TKVIGLIGHP 1qnf 71 :SRLLLLQGDP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.35069 Ang T2.CB and K3.N neighbor-bump: 2.47966 Ang T2.OG1 and K3.N T0191 22 :PIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGF 1qnf 81 :QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGI Fragment has 40 clashes (null) has 40 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.85794 Ang L14.O and F43.CE2 other bump:2.72002 Ang V41.CG1 and F43.CE1 other bump:2.62038 Ang L14.O and F43.CD2 other bump:2.37464 Ang V41.CG1 and F43.CD1 other bump:2.23944 Ang N6.OD1 and L38.CD2 other bump:2.41356 Ang N6.OD1 and L38.CG other bump:3.31028 Ang N6.CG and A37.C other bump:2.58738 Ang N6.ND2 and A37.C other bump:1.85296 Ang N6.ND2 and A37.CB other bump:2.68235 Ang N6.ND2 and A37.CA other bump:2.88367 Ang N27.O and Y30.CE2 other bump:3.05418 Ang N27.CA and Y30.CE2 other bump:2.53449 Ang N27.O and Y30.CD2 other bump:3.05863 Ang N27.C and Y30.CD2 other bump:2.89124 Ang N27.CA and Y30.CD2 other bump:2.03014 Ang D22.OD2 and N27.ND2 other bump:2.8844 Ang F9.CG and V17.CG2 other bump:2.14112 Ang F9.CD2 and V17.CG2 other bump:1.93996 Ang F9.CE2 and V17.CG2 other bump:2.94014 Ang H5.NE2 and V17.CG2 other bump:2.57845 Ang F9.CZ and V17.CG2 other bump:2.50954 Ang F9.CE2 and V17.CG1 other bump:2.60215 Ang H5.CE1 and V17.CG1 other bump:2.48286 Ang H5.NE2 and V17.CG1 other bump:2.38361 Ang F9.CZ and V17.CG1 other bump:2.58474 Ang F9.CE2 and V17.CB neighbor-bump: 2.55087 Ang N15.OD1 and Y16.CD1 other bump:2.44249 Ang F9.CD1 and L14.CD1 other bump:2.86105 Ang H5.CD2 and F9.CZ other bump:1.38146 Ang H5.CE1 and F9.CZ other bump:1.74957 Ang H5.NE2 and F9.CZ other bump:2.46674 Ang H5.ND1 and F9.CZ other bump:2.18005 Ang H5.CD2 and F9.CE2 other bump:1.98779 Ang H5.CE1 and F9.CE2 other bump:1.2149 Ang H5.NE2 and F9.CE2 other bump:3.04762 Ang H5.CG and F9.CE2 other bump:2.94192 Ang H5.ND1 and F9.CE2 other bump:2.48301 Ang H5.CE1 and F9.CE1 other bump:3.14255 Ang H5.ND1 and F9.CE1 other bump:2.42486 Ang H5.NE2 and F9.CD2 Number of specific fragments= 2 total=490 Number of alignments=153 # command:# Prefix for input files set to 1dxeA/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1dxeA-T0191-fssp-global-adpstyle1.pw.a2m.gz # 1dxeA read from 1dxeA-T0191-fssp-global-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 1 :MINAKTKVIGLIGHP 1dxeA 14 :LAAKQVQIGCWSALS Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.97102 Ang G13.O and P15.CD other bump:2.55828 Ang G13.C and P15.CD neighbor-bump: 1.90764 Ang H14.C and P15.CD self-bump: 2.18079 Ang P15.CA and P15.CD other bump:3.05505 Ang G13.C and P15.CG T0191 22 :PIMHNAAFKDKGLNYVYVAF 1dxeA 29 :NPISTEVLGLAGFDWLVLDG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.89265 Ang F9.CD1 and K12.NZ other bump:2.1962 Ang F9.CE1 and K12.NZ neighbor-bump: 1.78827 Ang G1.C and P2.CD T0191 42 :DVLPENLKYVIDGAKA 1dxeA 52 :PNDISTFIPQLMALKG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues neighbor-bump: 2.06455 Ang K16.O and A17.CB neighbor-bump: 2.49632 Ang K16.C and A17.CB other bump:2.76841 Ang V3.CG1 and L8.CD1 T0191 58 :LGIVGFNVTIPHKIEIMKYLDEIDK 1dxeA 90 :IGFYNFLIPFVETKEEAELAVASTR Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.79653 Ang L21.CD2 and I24.CD1 other bump:2.96309 Ang V9.CG1 and L21.CD2 other bump:2.70668 Ang V9.CG1 and L21.CG other bump:2.63699 Ang E16.O and Y20.CD1 other bump:2.8242 Ang K14.CG and I17.CG1 other bump:2.90645 Ang K14.CE and I17.CG1 other bump:3.15768 Ang K14.CG and I17.N other bump:1.52177 Ang I11.CG2 and H13.NE2 other bump:2.82431 Ang I11.CG2 and H13.CE1 other bump:1.86834 Ang I11.CG2 and H13.CD2 neighbor-bump: 2.45519 Ang I11.CA and P12.CD other bump:2.89513 Ang T10.C and P12.CD neighbor-bump: 2.48558 Ang I11.N and P12.CD self-bump: 2.18549 Ang P12.N and P12.CG T0191 83 :DAQLIGAVN 1dxeA 145 :NITILVQIE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues T0191 92 :TIKIEDGK 1dxeA 161 :VDAIAATE Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:2.20793 Ang I3.O and D7.OD1 other bump:1.85417 Ang K4.O and D7.OD1 other bump:2.00146 Ang K4.C and D7.OD1 other bump:2.16929 Ang K4.CA and D7.OD1 other bump:3.15637 Ang K4.C and D7.CG other bump:3.15272 Ang K4.CA and D7.CG other bump:2.10459 Ang I3.CA and E6.OE2 other bump:0.981166 Ang T2.O and E6.OE1 other bump:1.88924 Ang T2.C and E6.OE1 other bump:2.52742 Ang I3.CA and E6.OE1 other bump:2.21919 Ang T2.O and E6.CD other bump:2.92191 Ang T2.C and E6.CD other bump:2.49088 Ang I3.CA and E6.CD other bump:2.90242 Ang I3.C and E6.CD T0191 100 :AIGYNT 1dxeA 170 :VDGIFV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 106 :DGIG 1dxeA 232 :TFVA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 110 :A 1dxeA 237 :G Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 2 residues Number of specific fragments= 9 total=499 Number of alignments=154 # Reading fragments from alignment file # T0191 read from 1dxeA-T0191-fssp-global-adpstyle5.pw.a2m.gz # 1dxeA read from 1dxeA-T0191-fssp-global-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 1 :MINAKTKVIGLIGHP 1dxeA 14 :LAAKQVQIGCWSALS Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.97102 Ang G13.O and P15.CD other bump:2.55828 Ang G13.C and P15.CD neighbor-bump: 1.90764 Ang H14.C and P15.CD self-bump: 2.18079 Ang P15.CA and P15.CD other bump:3.05505 Ang G13.C and P15.CG T0191 22 :PIMHNAAFKDKGLNYVYVAFD 1dxeA 29 :NPISTEVLGLAGFDWLVLDGE Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.89265 Ang F9.CD1 and K12.NZ other bump:2.1962 Ang F9.CE1 and K12.NZ neighbor-bump: 1.78827 Ang G1.C and P2.CD T0191 43 :VLPENLKYVIDGAKA 1dxeA 53 :NDISTFIPQLMALKG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues neighbor-bump: 2.06455 Ang K15.O and A16.CB neighbor-bump: 2.49632 Ang K15.C and A16.CB T0191 58 :LGIVGFNVTIPHKIEIMKYLDEIDK 1dxeA 90 :IGFYNFLIPFVETKEEAELAVASTR Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.79653 Ang L21.CD2 and I24.CD1 other bump:2.96309 Ang V9.CG1 and L21.CD2 other bump:2.70668 Ang V9.CG1 and L21.CG other bump:2.63699 Ang E16.O and Y20.CD1 other bump:2.8242 Ang K14.CG and I17.CG1 other bump:2.90645 Ang K14.CE and I17.CG1 other bump:3.15768 Ang K14.CG and I17.N other bump:1.52177 Ang I11.CG2 and H13.NE2 other bump:2.82431 Ang I11.CG2 and H13.CE1 other bump:1.86834 Ang I11.CG2 and H13.CD2 neighbor-bump: 2.45519 Ang I11.CA and P12.CD other bump:2.89513 Ang T10.C and P12.CD neighbor-bump: 2.48558 Ang I11.N and P12.CD self-bump: 2.18549 Ang P12.N and P12.CG T0191 83 :DAQLIGAV 1dxeA 145 :NITILVQI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues T0191 91 :NTIKIEDG 1dxeA 171 :DGIFVGPS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues T0191 99 :K 1dxeA 212 :P Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues T0191 100 :AIGYNTDG 1dxeA 231 :ATFVAVGS Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:1.97715 Ang A2.N and Y5.OH other bump:1.41656 Ang A2.CA and Y5.OH other bump:0.614331 Ang A2.CB and Y5.OH other bump:2.52565 Ang A2.C and Y5.OH other bump:2.23715 Ang A2.CA and Y5.CZ other bump:1.07541 Ang A2.CB and Y5.CZ other bump:2.62214 Ang A2.C and Y5.CZ other bump:2.57623 Ang A2.CA and Y5.CE2 other bump:2.183 Ang A2.CB and Y5.CE2 other bump:2.21153 Ang A2.O and Y5.CE2 other bump:2.06044 Ang A2.C and Y5.CE2 other bump:2.63885 Ang I3.N and Y5.CE2 other bump:2.05263 Ang A2.CB and Y5.CE1 T0191 109 :GA 1dxeA 240 :LG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues Number of specific fragments= 9 total=508 Number of alignments=155 # Reading fragments from alignment file # T0191 read from 1dxeA-T0191-local-adpstyle1.pw.a2m.gz # 1dxeA read from 1dxeA-T0191-local-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 29 :FKDKGLNYVYVAF 1dxeA 113 :TRYPPEGIRGVSV Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.45203 Ang G1.O and V10.CG2 other bump:2.87863 Ang G1.C and V10.CG2 other bump:3.01079 Ang F2.CA and V10.CG2 other bump:2.78357 Ang F2.C and V10.CG2 other bump:3.11495 Ang F2.N and V10.CG2 other bump:2.66594 Ang K3.N and V10.CG2 other bump:0.818996 Ang K3.O and N8.OD1 other bump:1.77529 Ang K3.C and N8.OD1 other bump:2.44274 Ang D4.CA and N8.OD1 other bump:2.67814 Ang D4.C and N8.OD1 other bump:2.41426 Ang K3.N and N8.ND2 other bump:1.19995 Ang K3.CA and N8.ND2 other bump:1.91537 Ang K3.CB and N8.ND2 other bump:1.61207 Ang K3.O and N8.ND2 other bump:0.665848 Ang K3.C and N8.ND2 other bump:1.61568 Ang D4.N and N8.ND2 other bump:2.82605 Ang D4.CA and N8.ND2 other bump:2.79991 Ang K3.N and N8.CG other bump:2.18172 Ang K3.CA and N8.CG other bump:2.84748 Ang K3.CB and N8.CG other bump:0.526035 Ang K3.O and N8.CG other bump:1.17462 Ang K3.C and N8.CG other bump:2.28187 Ang D4.N and N8.CG other bump:2.93447 Ang D4.CA and N8.CG other bump:3.07629 Ang D4.C and N8.CG other bump:3.08846 Ang K3.N and N8.CB other bump:2.87504 Ang K3.CA and N8.CB other bump:3.02296 Ang K3.CB and N8.CB other bump:1.83597 Ang K3.O and N8.CB other bump:2.54198 Ang K3.C and N8.CB T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDK 1dxeA 126 :SHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDA Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.75175 Ang L34.CA and I37.CD1 other bump:2.42447 Ang L34.CD1 and I37.CD1 other bump:2.94433 Ang L34.CA and I37.CG1 other bump:2.8399 Ang I28.CG1 and Y33.OH other bump:2.18483 Ang I28.CD1 and Y33.OH other bump:2.38152 Ang I28.CG1 and Y33.CZ other bump:1.20379 Ang I28.CD1 and Y33.CZ other bump:2.13242 Ang I28.CB and Y33.CE2 other bump:2.7683 Ang I28.CG2 and Y33.CE2 other bump:3.09679 Ang I28.N and Y33.CE2 other bump:2.52424 Ang I28.CA and Y33.CE2 other bump:1.25749 Ang I28.CG1 and Y33.CE2 other bump:0.51554 Ang I28.CD1 and Y33.CE2 other bump:2.2298 Ang I28.CD1 and Y33.CE1 other bump:2.12432 Ang I28.CB and Y33.CD2 other bump:2.06593 Ang I28.CG2 and Y33.CD2 other bump:2.29781 Ang I28.CA and Y33.CD2 other bump:2.17781 Ang I28.CG1 and Y33.CD2 other bump:1.59705 Ang I28.CD1 and Y33.CD2 other bump:2.68949 Ang I28.CD1 and Y33.CD1 other bump:3.12432 Ang I28.CA and Y33.CG other bump:2.47717 Ang I28.CD1 and Y33.CG other bump:2.81849 Ang I30.CG2 and Y33.N other bump:3.04812 Ang I17.CG2 and N21.ND2 other bump:2.71357 Ang Y7.CB and D10.OD2 other bump:2.20191 Ang Y7.CB and D10.OD1 other bump:2.75887 Ang Y7.CA and D10.OD1 other bump:1.36272 Ang Y7.O and D10.OD1 other bump:2.19687 Ang Y7.C and D10.OD1 other bump:2.77157 Ang Y7.CB and D10.CG other bump:2.49184 Ang Y7.O and D10.CG neighbor-bump: 2.90812 Ang V8.C and I9.CG1 neighbor-bump: 2.10481 Ang V8.O and I9.CB neighbor-bump: 2.44569 Ang V8.C and I9.CB other bump:2.80677 Ang G1.C and K6.NZ neighbor-bump: 1.6987 Ang G1.C and P2.CD neighbor-bump: 2.51177 Ang G1.O and P2.CG neighbor-bump: 2.4247 Ang G1.C and P2.CG Number of specific fragments= 2 total=510 Number of alignments=156 # Reading fragments from alignment file # T0191 read from 1dxeA-T0191-local-adpstyle5.pw.a2m.gz # 1dxeA read from 1dxeA-T0191-local-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 31 :DKGLNYVYVAF 1dxeA 115 :YPPEGIRGVSV Fragment has 15 clashes (null) has 15 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues other bump:1.77529 Ang G1.C and N6.OD1 other bump:0.818996 Ang G1.O and N6.OD1 other bump:2.44274 Ang D2.CA and N6.OD1 other bump:2.67814 Ang D2.C and N6.OD1 other bump:0.665848 Ang G1.C and N6.ND2 other bump:1.61207 Ang G1.O and N6.ND2 other bump:1.61568 Ang D2.N and N6.ND2 other bump:2.82605 Ang D2.CA and N6.ND2 other bump:1.17462 Ang G1.C and N6.CG other bump:0.526035 Ang G1.O and N6.CG other bump:2.28187 Ang D2.N and N6.CG other bump:2.93447 Ang D2.CA and N6.CG other bump:3.07629 Ang D2.C and N6.CG other bump:2.54198 Ang G1.C and N6.CB other bump:1.83597 Ang G1.O and N6.CB T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1dxeA 126 :SHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVD Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 39 residues other bump:2.75175 Ang L34.CA and I37.CD1 other bump:2.42447 Ang L34.CD1 and I37.CD1 other bump:2.94433 Ang L34.CA and I37.CG1 other bump:2.8399 Ang I28.CG1 and Y33.OH other bump:2.18483 Ang I28.CD1 and Y33.OH other bump:2.38152 Ang I28.CG1 and Y33.CZ other bump:1.20379 Ang I28.CD1 and Y33.CZ other bump:2.13242 Ang I28.CB and Y33.CE2 other bump:2.7683 Ang I28.CG2 and Y33.CE2 other bump:3.09679 Ang I28.N and Y33.CE2 other bump:2.52424 Ang I28.CA and Y33.CE2 other bump:1.25749 Ang I28.CG1 and Y33.CE2 other bump:0.51554 Ang I28.CD1 and Y33.CE2 other bump:2.2298 Ang I28.CD1 and Y33.CE1 other bump:2.12432 Ang I28.CB and Y33.CD2 other bump:2.06593 Ang I28.CG2 and Y33.CD2 other bump:2.29781 Ang I28.CA and Y33.CD2 other bump:2.17781 Ang I28.CG1 and Y33.CD2 other bump:1.59705 Ang I28.CD1 and Y33.CD2 other bump:2.68949 Ang I28.CD1 and Y33.CD1 other bump:3.12432 Ang I28.CA and Y33.CG other bump:2.47717 Ang I28.CD1 and Y33.CG other bump:2.81849 Ang I30.CG2 and Y33.N other bump:3.04812 Ang I17.CG2 and N21.ND2 other bump:2.71357 Ang Y7.CB and D10.OD2 other bump:2.20191 Ang Y7.CB and D10.OD1 other bump:2.75887 Ang Y7.CA and D10.OD1 other bump:1.36272 Ang Y7.O and D10.OD1 other bump:2.19687 Ang Y7.C and D10.OD1 other bump:2.77157 Ang Y7.CB and D10.CG other bump:2.49184 Ang Y7.O and D10.CG neighbor-bump: 2.90812 Ang V8.C and I9.CG1 neighbor-bump: 2.10481 Ang V8.O and I9.CB neighbor-bump: 2.44569 Ang V8.C and I9.CB other bump:2.80677 Ang G1.C and K6.NZ neighbor-bump: 1.6987 Ang G1.C and P2.CD neighbor-bump: 2.51177 Ang G1.O and P2.CG neighbor-bump: 2.4247 Ang G1.C and P2.CG Number of specific fragments= 2 total=512 Number of alignments=157 # Reading fragments from alignment file # T0191 read from 1dxeA-T0191-vit-adpstyle1.pw.a2m.gz # 1dxeA read from 1dxeA-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 29 :FKDKGLNYVYVAF 1dxeA 113 :TRYPPEGIRGVSV Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:2.45203 Ang G1.O and V10.CG2 other bump:2.87863 Ang G1.C and V10.CG2 other bump:3.01079 Ang F2.CA and V10.CG2 other bump:2.78357 Ang F2.C and V10.CG2 other bump:3.11495 Ang F2.N and V10.CG2 other bump:2.66594 Ang K3.N and V10.CG2 other bump:0.818996 Ang K3.O and N8.OD1 other bump:1.77529 Ang K3.C and N8.OD1 other bump:2.44274 Ang D4.CA and N8.OD1 other bump:2.67814 Ang D4.C and N8.OD1 other bump:2.41426 Ang K3.N and N8.ND2 other bump:1.19995 Ang K3.CA and N8.ND2 other bump:1.91537 Ang K3.CB and N8.ND2 other bump:1.61207 Ang K3.O and N8.ND2 other bump:0.665848 Ang K3.C and N8.ND2 other bump:1.61568 Ang D4.N and N8.ND2 other bump:2.82605 Ang D4.CA and N8.ND2 other bump:2.79991 Ang K3.N and N8.CG other bump:2.18172 Ang K3.CA and N8.CG other bump:2.84748 Ang K3.CB and N8.CG other bump:0.526035 Ang K3.O and N8.CG other bump:1.17462 Ang K3.C and N8.CG other bump:2.28187 Ang D4.N and N8.CG other bump:2.93447 Ang D4.CA and N8.CG other bump:3.07629 Ang D4.C and N8.CG other bump:3.08846 Ang K3.N and N8.CB other bump:2.87504 Ang K3.CA and N8.CB other bump:3.02296 Ang K3.CB and N8.CB other bump:1.83597 Ang K3.O and N8.CB other bump:2.54198 Ang K3.C and N8.CB T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDK 1dxeA 126 :SHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDA Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:2.75175 Ang L34.CA and I37.CD1 other bump:2.42447 Ang L34.CD1 and I37.CD1 other bump:2.94433 Ang L34.CA and I37.CG1 other bump:2.8399 Ang I28.CG1 and Y33.OH other bump:2.18483 Ang I28.CD1 and Y33.OH other bump:2.38152 Ang I28.CG1 and Y33.CZ other bump:1.20379 Ang I28.CD1 and Y33.CZ other bump:2.13242 Ang I28.CB and Y33.CE2 other bump:2.7683 Ang I28.CG2 and Y33.CE2 other bump:3.09679 Ang I28.N and Y33.CE2 other bump:2.52424 Ang I28.CA and Y33.CE2 other bump:1.25749 Ang I28.CG1 and Y33.CE2 other bump:0.51554 Ang I28.CD1 and Y33.CE2 other bump:2.2298 Ang I28.CD1 and Y33.CE1 other bump:2.12432 Ang I28.CB and Y33.CD2 other bump:2.06593 Ang I28.CG2 and Y33.CD2 other bump:2.29781 Ang I28.CA and Y33.CD2 other bump:2.17781 Ang I28.CG1 and Y33.CD2 other bump:1.59705 Ang I28.CD1 and Y33.CD2 other bump:2.68949 Ang I28.CD1 and Y33.CD1 other bump:3.12432 Ang I28.CA and Y33.CG other bump:2.47717 Ang I28.CD1 and Y33.CG other bump:2.81849 Ang I30.CG2 and Y33.N other bump:3.04812 Ang I17.CG2 and N21.ND2 other bump:2.71357 Ang Y7.CB and D10.OD2 other bump:2.20191 Ang Y7.CB and D10.OD1 other bump:2.75887 Ang Y7.CA and D10.OD1 other bump:1.36272 Ang Y7.O and D10.OD1 other bump:2.19687 Ang Y7.C and D10.OD1 other bump:2.77157 Ang Y7.CB and D10.CG other bump:2.49184 Ang Y7.O and D10.CG neighbor-bump: 2.90812 Ang V8.C and I9.CG1 neighbor-bump: 2.10481 Ang V8.O and I9.CB neighbor-bump: 2.44569 Ang V8.C and I9.CB other bump:2.80677 Ang G1.C and K6.NZ neighbor-bump: 1.6987 Ang G1.C and P2.CD neighbor-bump: 2.51177 Ang G1.O and P2.CG neighbor-bump: 2.4247 Ang G1.C and P2.CG Number of specific fragments= 2 total=514 Number of alignments=158 # Reading fragments from alignment file # T0191 read from 1dxeA-T0191-vit-adpstyle5.pw.a2m.gz # 1dxeA read from 1dxeA-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 31 :DKGLNYVYVAF 1dxeA 115 :YPPEGIRGVSV Fragment has 15 clashes (null) has 15 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 13 residues other bump:1.77529 Ang G1.C and N6.OD1 other bump:0.818996 Ang G1.O and N6.OD1 other bump:2.44274 Ang D2.CA and N6.OD1 other bump:2.67814 Ang D2.C and N6.OD1 other bump:0.665848 Ang G1.C and N6.ND2 other bump:1.61207 Ang G1.O and N6.ND2 other bump:1.61568 Ang D2.N and N6.ND2 other bump:2.82605 Ang D2.CA and N6.ND2 other bump:1.17462 Ang G1.C and N6.CG other bump:0.526035 Ang G1.O and N6.CG other bump:2.28187 Ang D2.N and N6.CG other bump:2.93447 Ang D2.CA and N6.CG other bump:3.07629 Ang D2.C and N6.CG other bump:2.54198 Ang G1.C and N6.CB other bump:1.83597 Ang G1.O and N6.CB T0191 45 :PENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1dxeA 126 :SHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVD Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 39 residues other bump:2.75175 Ang L34.CA and I37.CD1 other bump:2.42447 Ang L34.CD1 and I37.CD1 other bump:2.94433 Ang L34.CA and I37.CG1 other bump:2.8399 Ang I28.CG1 and Y33.OH other bump:2.18483 Ang I28.CD1 and Y33.OH other bump:2.38152 Ang I28.CG1 and Y33.CZ other bump:1.20379 Ang I28.CD1 and Y33.CZ other bump:2.13242 Ang I28.CB and Y33.CE2 other bump:2.7683 Ang I28.CG2 and Y33.CE2 other bump:3.09679 Ang I28.N and Y33.CE2 other bump:2.52424 Ang I28.CA and Y33.CE2 other bump:1.25749 Ang I28.CG1 and Y33.CE2 other bump:0.51554 Ang I28.CD1 and Y33.CE2 other bump:2.2298 Ang I28.CD1 and Y33.CE1 other bump:2.12432 Ang I28.CB and Y33.CD2 other bump:2.06593 Ang I28.CG2 and Y33.CD2 other bump:2.29781 Ang I28.CA and Y33.CD2 other bump:2.17781 Ang I28.CG1 and Y33.CD2 other bump:1.59705 Ang I28.CD1 and Y33.CD2 other bump:2.68949 Ang I28.CD1 and Y33.CD1 other bump:3.12432 Ang I28.CA and Y33.CG other bump:2.47717 Ang I28.CD1 and Y33.CG other bump:2.81849 Ang I30.CG2 and Y33.N other bump:3.04812 Ang I17.CG2 and N21.ND2 other bump:2.71357 Ang Y7.CB and D10.OD2 other bump:2.20191 Ang Y7.CB and D10.OD1 other bump:2.75887 Ang Y7.CA and D10.OD1 other bump:1.36272 Ang Y7.O and D10.OD1 other bump:2.19687 Ang Y7.C and D10.OD1 other bump:2.77157 Ang Y7.CB and D10.CG other bump:2.49184 Ang Y7.O and D10.CG neighbor-bump: 2.90812 Ang V8.C and I9.CG1 neighbor-bump: 2.10481 Ang V8.O and I9.CB neighbor-bump: 2.44569 Ang V8.C and I9.CB other bump:2.80677 Ang G1.C and K6.NZ neighbor-bump: 1.6987 Ang G1.C and P2.CD neighbor-bump: 2.51177 Ang G1.O and P2.CG neighbor-bump: 2.4247 Ang G1.C and P2.CG Number of specific fragments= 2 total=516 Number of alignments=159 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 4 :AKTKVIGLI 1dxeA 16 :AKQVQIGCW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.59069 Ang G8.O and L9.CD2 other bump:2.29123 Ang K5.CE and I7.CD1 T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 25 :SALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 104 clashes (null) has 104 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.63951 Ang K14.NZ and G43.C other bump:2.46236 Ang K14.NZ and G43.CA other bump:1.57552 Ang K14.NZ and G43.N other bump:2.7399 Ang K14.CD and L42.C other bump:1.58793 Ang K14.CE and L42.C other bump:0.540716 Ang K14.NZ and L42.C other bump:1.77479 Ang K14.CE and L42.O other bump:1.01578 Ang K14.NZ and L42.O other bump:2.71548 Ang K14.CB and L42.CD2 other bump:2.80309 Ang K14.CG and L42.CD2 other bump:2.93165 Ang K14.CD and L42.CD2 other bump:2.89363 Ang K14.CE and L42.CD2 other bump:2.91992 Ang K14.CE and L42.CG other bump:3.12498 Ang K14.CD and L42.CB other bump:1.93915 Ang K14.CE and L42.CB other bump:2.81091 Ang K14.NZ and L42.CB other bump:2.2086 Ang K14.CD and L42.CA other bump:1.23496 Ang K14.CE and L42.CA other bump:1.77282 Ang K14.NZ and L42.CA other bump:3.13991 Ang K14.CD and L42.N other bump:2.63739 Ang K14.CE and L42.N other bump:2.72765 Ang K14.CD and A41.O other bump:2.62026 Ang I7.CD1 and G38.CA other bump:1.87584 Ang I7.CD1 and G38.N other bump:2.85753 Ang I7.CG1 and D37.C other bump:1.7675 Ang I7.CD1 and D37.C other bump:2.31277 Ang I7.CD1 and D37.O other bump:2.25316 Ang I7.CG1 and D37.CB other bump:2.3076 Ang I7.CD1 and D37.CB other bump:3.07471 Ang I7.CG1 and D37.CA other bump:2.47981 Ang I7.CD1 and D37.CA other bump:2.1803 Ang F25.CE1 and V35.CG2 other bump:3.05466 Ang F25.CE2 and V35.CG2 other bump:1.76836 Ang F25.CZ and V35.CG2 other bump:2.53904 Ang P6.CA and Y34.OH other bump:2.31159 Ang S5.N and Y34.OH other bump:2.03042 Ang S5.CA and Y34.OH other bump:1.7556 Ang S5.C and Y34.OH other bump:1.18108 Ang P6.N and Y34.OH other bump:1.84275 Ang P6.CD and Y34.OH other bump:2.97336 Ang S5.CB and Y34.CZ other bump:2.69582 Ang P6.CA and Y34.CZ other bump:2.81066 Ang S5.N and Y34.CZ other bump:1.75006 Ang S5.CA and Y34.CZ other bump:1.30956 Ang S5.C and Y34.CZ other bump:1.55315 Ang P6.N and Y34.CZ other bump:2.60681 Ang P6.CD and Y34.CZ other bump:2.22117 Ang S5.O and Y34.CZ other bump:3.02483 Ang S5.CB and Y34.CE2 other bump:3.16446 Ang S5.N and Y34.CE2 other bump:2.1149 Ang S5.CA and Y34.CE2 other bump:2.46907 Ang S5.C and Y34.CE2 other bump:2.91315 Ang P6.N and Y34.CE2 other bump:2.20806 Ang P6.CA and Y34.CE1 other bump:2.52305 Ang S5.CA and Y34.CE1 other bump:1.30283 Ang S5.C and Y34.CE1 other bump:1.74705 Ang P6.N and Y34.CE1 other bump:1.33059 Ang S5.O and Y34.CE1 other bump:3.05008 Ang S5.CA and Y34.CD2 other bump:2.47699 Ang S5.C and Y34.CD1 other bump:1.96009 Ang S5.O and Y34.CD1 other bump:3.28759 Ang S5.C and Y34.CG other bump:2.54832 Ang V23.CB and E30.OE2 other bump:1.50398 Ang V23.CG1 and E30.OE2 other bump:2.70144 Ang F25.CE2 and E30.OE2 other bump:2.77194 Ang F25.CZ and E30.OE2 other bump:1.90936 Ang F25.CG and E30.OE1 other bump:2.43413 Ang F25.CD1 and E30.OE1 other bump:1.54904 Ang F25.CD2 and E30.OE1 other bump:1.88091 Ang F25.CE2 and E30.OE1 other bump:2.42143 Ang F25.CZ and E30.OE1 other bump:2.72913 Ang V23.CG1 and E30.CD other bump:2.88703 Ang F25.CG and E30.CD other bump:2.85528 Ang F25.CD1 and E30.CD other bump:2.60442 Ang F25.CD2 and E30.CD other bump:2.27686 Ang F25.CE2 and E30.CD other bump:2.25191 Ang F25.CZ and E30.CD other bump:2.65341 Ang F25.CD1 and E30.CG other bump:2.26467 Ang F25.CE1 and E30.CG other bump:2.24593 Ang S3.CB and L28.CD2 other bump:2.32056 Ang S3.CA and L28.CD1 other bump:2.39862 Ang S3.CB and L28.CD1 other bump:2.43599 Ang H2.O and L28.CD1 other bump:2.91035 Ang S3.N and L28.CD1 other bump:2.79549 Ang A24.CB and L28.CD1 other bump:3.16044 Ang S3.CA and L28.CG other bump:2.78089 Ang S3.CB and L28.CG other bump:2.89265 Ang F13.CD1 and K16.NZ other bump:2.1962 Ang F13.CE1 and K16.NZ other bump:2.33775 Ang H2.CD2 and N10.OD1 other bump:1.4628 Ang H2.NE2 and N10.OD1 other bump:2.36367 Ang H2.ND1 and N10.OD1 other bump:1.5295 Ang H2.CE1 and N10.OD1 other bump:2.24404 Ang H2.NE2 and N10.ND2 other bump:2.70125 Ang H2.ND1 and N10.ND2 other bump:1.50937 Ang H2.CE1 and N10.ND2 other bump:2.10675 Ang H2.NE2 and N10.CG other bump:1.54318 Ang H2.CE1 and N10.CG other bump:2.91586 Ang H2.CE1 and N10.CB other bump:1.75387 Ang F4.O and P6.CD other bump:2.19876 Ang F4.C and P6.CD neighbor-bump: 2.44741 Ang S5.N and P6.CD neighbor-bump: 2.43474 Ang S5.CA and P6.CD neighbor-bump: 1.78827 Ang S5.C and P6.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKIEDGK 1dxeA 85 :KRLLDIGFYNFLIPFVET Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues Number of specific fragments= 4 total=520 Number of alignments=160 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 4 :AKTKVIGLI 1dxeA 16 :AKQVQIGCW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.59069 Ang G8.O and L9.CD2 other bump:2.29123 Ang K5.CE and I7.CD1 T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 25 :SALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 104 clashes (null) has 104 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.63951 Ang K14.NZ and G43.C other bump:2.46236 Ang K14.NZ and G43.CA other bump:1.57552 Ang K14.NZ and G43.N other bump:2.7399 Ang K14.CD and L42.C other bump:1.58793 Ang K14.CE and L42.C other bump:0.540716 Ang K14.NZ and L42.C other bump:1.77479 Ang K14.CE and L42.O other bump:1.01578 Ang K14.NZ and L42.O other bump:2.71548 Ang K14.CB and L42.CD2 other bump:2.80309 Ang K14.CG and L42.CD2 other bump:2.93165 Ang K14.CD and L42.CD2 other bump:2.89363 Ang K14.CE and L42.CD2 other bump:2.91992 Ang K14.CE and L42.CG other bump:3.12498 Ang K14.CD and L42.CB other bump:1.93915 Ang K14.CE and L42.CB other bump:2.81091 Ang K14.NZ and L42.CB other bump:2.2086 Ang K14.CD and L42.CA other bump:1.23496 Ang K14.CE and L42.CA other bump:1.77282 Ang K14.NZ and L42.CA other bump:3.13991 Ang K14.CD and L42.N other bump:2.63739 Ang K14.CE and L42.N other bump:2.72765 Ang K14.CD and A41.O other bump:2.62026 Ang I7.CD1 and G38.CA other bump:1.87584 Ang I7.CD1 and G38.N other bump:2.85753 Ang I7.CG1 and D37.C other bump:1.7675 Ang I7.CD1 and D37.C other bump:2.31277 Ang I7.CD1 and D37.O other bump:2.25316 Ang I7.CG1 and D37.CB other bump:2.3076 Ang I7.CD1 and D37.CB other bump:3.07471 Ang I7.CG1 and D37.CA other bump:2.47981 Ang I7.CD1 and D37.CA other bump:2.1803 Ang F25.CE1 and V35.CG2 other bump:3.05466 Ang F25.CE2 and V35.CG2 other bump:1.76836 Ang F25.CZ and V35.CG2 other bump:2.53904 Ang P6.CA and Y34.OH other bump:2.31159 Ang S5.N and Y34.OH other bump:2.03042 Ang S5.CA and Y34.OH other bump:1.7556 Ang S5.C and Y34.OH other bump:1.18108 Ang P6.N and Y34.OH other bump:1.84275 Ang P6.CD and Y34.OH other bump:2.97336 Ang S5.CB and Y34.CZ other bump:2.69582 Ang P6.CA and Y34.CZ other bump:2.81066 Ang S5.N and Y34.CZ other bump:1.75006 Ang S5.CA and Y34.CZ other bump:1.30956 Ang S5.C and Y34.CZ other bump:1.55315 Ang P6.N and Y34.CZ other bump:2.60681 Ang P6.CD and Y34.CZ other bump:2.22117 Ang S5.O and Y34.CZ other bump:3.02483 Ang S5.CB and Y34.CE2 other bump:3.16446 Ang S5.N and Y34.CE2 other bump:2.1149 Ang S5.CA and Y34.CE2 other bump:2.46907 Ang S5.C and Y34.CE2 other bump:2.91315 Ang P6.N and Y34.CE2 other bump:2.20806 Ang P6.CA and Y34.CE1 other bump:2.52305 Ang S5.CA and Y34.CE1 other bump:1.30283 Ang S5.C and Y34.CE1 other bump:1.74705 Ang P6.N and Y34.CE1 other bump:1.33059 Ang S5.O and Y34.CE1 other bump:3.05008 Ang S5.CA and Y34.CD2 other bump:2.47699 Ang S5.C and Y34.CD1 other bump:1.96009 Ang S5.O and Y34.CD1 other bump:3.28759 Ang S5.C and Y34.CG other bump:2.54832 Ang V23.CB and E30.OE2 other bump:1.50398 Ang V23.CG1 and E30.OE2 other bump:2.70144 Ang F25.CE2 and E30.OE2 other bump:2.77194 Ang F25.CZ and E30.OE2 other bump:1.90936 Ang F25.CG and E30.OE1 other bump:2.43413 Ang F25.CD1 and E30.OE1 other bump:1.54904 Ang F25.CD2 and E30.OE1 other bump:1.88091 Ang F25.CE2 and E30.OE1 other bump:2.42143 Ang F25.CZ and E30.OE1 other bump:2.72913 Ang V23.CG1 and E30.CD other bump:2.88703 Ang F25.CG and E30.CD other bump:2.85528 Ang F25.CD1 and E30.CD other bump:2.60442 Ang F25.CD2 and E30.CD other bump:2.27686 Ang F25.CE2 and E30.CD other bump:2.25191 Ang F25.CZ and E30.CD other bump:2.65341 Ang F25.CD1 and E30.CG other bump:2.26467 Ang F25.CE1 and E30.CG other bump:2.24593 Ang S3.CB and L28.CD2 other bump:2.32056 Ang S3.CA and L28.CD1 other bump:2.39862 Ang S3.CB and L28.CD1 other bump:2.43599 Ang H2.O and L28.CD1 other bump:2.91035 Ang S3.N and L28.CD1 other bump:2.79549 Ang A24.CB and L28.CD1 other bump:3.16044 Ang S3.CA and L28.CG other bump:2.78089 Ang S3.CB and L28.CG other bump:2.89265 Ang F13.CD1 and K16.NZ other bump:2.1962 Ang F13.CE1 and K16.NZ other bump:2.33775 Ang H2.CD2 and N10.OD1 other bump:1.4628 Ang H2.NE2 and N10.OD1 other bump:2.36367 Ang H2.ND1 and N10.OD1 other bump:1.5295 Ang H2.CE1 and N10.OD1 other bump:2.24404 Ang H2.NE2 and N10.ND2 other bump:2.70125 Ang H2.ND1 and N10.ND2 other bump:1.50937 Ang H2.CE1 and N10.ND2 other bump:2.10675 Ang H2.NE2 and N10.CG other bump:1.54318 Ang H2.CE1 and N10.CG other bump:2.91586 Ang H2.CE1 and N10.CB other bump:1.75387 Ang F4.O and P6.CD other bump:2.19876 Ang F4.C and P6.CD neighbor-bump: 2.44741 Ang S5.N and P6.CD neighbor-bump: 2.43474 Ang S5.CA and P6.CD neighbor-bump: 1.78827 Ang S5.C and P6.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKI 1dxeA 85 :KRLLDIGFYNFLIP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues Number of specific fragments= 4 total=524 Number of alignments=161 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 43 :WLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.55229 Ang F35.CD2 and V37.C other bump:2.83109 Ang F35.CE2 and V37.C other bump:1.53479 Ang F35.CD2 and V37.O other bump:1.81821 Ang F35.CE2 and V37.O neighbor-bump: 2.66258 Ang D36.OD1 and V37.CG2 other bump:3.15164 Ang F35.CD2 and V37.CA other bump:2.62262 Ang F35.CD2 and V37.N other bump:3.05262 Ang F35.CE2 and V37.N self-bump: 1.26174 Ang D25.CA and D25.CB other bump:2.60616 Ang I3.CG2 and K24.NZ neighbor-bump: 2.23661 Ang S15.OG and P16.CD other bump:2.42359 Ang S13.OG and P16.CD other bump:2.47901 Ang V10.CG1 and H12.CE1 other bump:2.94667 Ang V10.CB and H12.ND1 other bump:2.24519 Ang V10.CG1 and H12.ND1 neighbor-bump: 2.60536 Ang H8.N and P9.CD neighbor-bump: 1.65074 Ang H8.C and P9.CD self-bump: 1.27382 Ang P9.N and P9.CD neighbor-bump: 2.06457 Ang H8.CA and P9.CD neighbor-bump: 2.16504 Ang H8.CB and P9.CD neighbor-bump: 2.71985 Ang H8.C and P9.CG self-bump: 2.1372 Ang P9.N and P9.CG neighbor-bump: 3.10009 Ang H8.CB and P9.CG T0191 47 :NLKYVIDGAKALGIVGFNV 1dxeA 79 :NEPVIIKRLLDIGFYNFLI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 Number of specific fragments= 2 total=526 Number of alignments=162 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 40 :GFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 28 clashes (null) has 28 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.55229 Ang F38.CD2 and V40.C other bump:2.83109 Ang F38.CE2 and V40.C other bump:1.53479 Ang F38.CD2 and V40.O other bump:1.81821 Ang F38.CE2 and V40.O neighbor-bump: 2.66258 Ang D39.OD1 and V40.CG2 other bump:3.15164 Ang F38.CD2 and V40.CA other bump:2.62262 Ang F38.CD2 and V40.N other bump:3.05262 Ang F38.CE2 and V40.N other bump:2.56212 Ang T3.CA and N32.OD1 other bump:1.02545 Ang T3.O and N32.OD1 other bump:1.92824 Ang T3.C and N32.OD1 other bump:2.17056 Ang T3.O and N32.CG other bump:3.14672 Ang T3.C and N32.CG self-bump: 1.26174 Ang D28.CA and D28.CB other bump:2.60616 Ang I6.CG2 and K27.NZ neighbor-bump: 2.23661 Ang S18.OG and P19.CD other bump:2.42359 Ang S16.OG and P19.CD other bump:2.47901 Ang V13.CG1 and H15.CE1 other bump:2.94667 Ang V13.CB and H15.ND1 other bump:2.24519 Ang V13.CG1 and H15.ND1 neighbor-bump: 2.60536 Ang H11.N and P12.CD neighbor-bump: 1.65074 Ang H11.C and P12.CD self-bump: 1.27382 Ang P12.N and P12.CD neighbor-bump: 2.06457 Ang H11.CA and P12.CD neighbor-bump: 2.16504 Ang H11.CB and P12.CD neighbor-bump: 2.71985 Ang H11.C and P12.CG self-bump: 2.1372 Ang P12.N and P12.CG neighbor-bump: 3.10009 Ang H11.CB and P12.CG T0191 47 :NLKYVIDGAKALGIVGFNVT 1dxeA 79 :NEPVIIKRLLDIGFYNFLIP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 Number of specific fragments= 2 total=528 Number of alignments=163 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 5 :KTKVIGLI 1dxeA 17 :KQVQIGCW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues neighbor-bump: 2.59069 Ang G7.O and L8.CD2 other bump:2.29123 Ang K4.CE and I6.CD1 T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 25 :SALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 104 clashes (null) has 104 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.63951 Ang K14.NZ and G43.C other bump:2.46236 Ang K14.NZ and G43.CA other bump:1.57552 Ang K14.NZ and G43.N other bump:2.7399 Ang K14.CD and L42.C other bump:1.58793 Ang K14.CE and L42.C other bump:0.540716 Ang K14.NZ and L42.C other bump:1.77479 Ang K14.CE and L42.O other bump:1.01578 Ang K14.NZ and L42.O other bump:2.71548 Ang K14.CB and L42.CD2 other bump:2.80309 Ang K14.CG and L42.CD2 other bump:2.93165 Ang K14.CD and L42.CD2 other bump:2.89363 Ang K14.CE and L42.CD2 other bump:2.91992 Ang K14.CE and L42.CG other bump:3.12498 Ang K14.CD and L42.CB other bump:1.93915 Ang K14.CE and L42.CB other bump:2.81091 Ang K14.NZ and L42.CB other bump:2.2086 Ang K14.CD and L42.CA other bump:1.23496 Ang K14.CE and L42.CA other bump:1.77282 Ang K14.NZ and L42.CA other bump:3.13991 Ang K14.CD and L42.N other bump:2.63739 Ang K14.CE and L42.N other bump:2.72765 Ang K14.CD and A41.O other bump:2.62026 Ang I7.CD1 and G38.CA other bump:1.87584 Ang I7.CD1 and G38.N other bump:2.85753 Ang I7.CG1 and D37.C other bump:1.7675 Ang I7.CD1 and D37.C other bump:2.31277 Ang I7.CD1 and D37.O other bump:2.25316 Ang I7.CG1 and D37.CB other bump:2.3076 Ang I7.CD1 and D37.CB other bump:3.07471 Ang I7.CG1 and D37.CA other bump:2.47981 Ang I7.CD1 and D37.CA other bump:2.1803 Ang F25.CE1 and V35.CG2 other bump:3.05466 Ang F25.CE2 and V35.CG2 other bump:1.76836 Ang F25.CZ and V35.CG2 other bump:2.53904 Ang P6.CA and Y34.OH other bump:2.31159 Ang S5.N and Y34.OH other bump:2.03042 Ang S5.CA and Y34.OH other bump:1.7556 Ang S5.C and Y34.OH other bump:1.18108 Ang P6.N and Y34.OH other bump:1.84275 Ang P6.CD and Y34.OH other bump:2.97336 Ang S5.CB and Y34.CZ other bump:2.69582 Ang P6.CA and Y34.CZ other bump:2.81066 Ang S5.N and Y34.CZ other bump:1.75006 Ang S5.CA and Y34.CZ other bump:1.30956 Ang S5.C and Y34.CZ other bump:1.55315 Ang P6.N and Y34.CZ other bump:2.60681 Ang P6.CD and Y34.CZ other bump:2.22117 Ang S5.O and Y34.CZ other bump:3.02483 Ang S5.CB and Y34.CE2 other bump:3.16446 Ang S5.N and Y34.CE2 other bump:2.1149 Ang S5.CA and Y34.CE2 other bump:2.46907 Ang S5.C and Y34.CE2 other bump:2.91315 Ang P6.N and Y34.CE2 other bump:2.20806 Ang P6.CA and Y34.CE1 other bump:2.52305 Ang S5.CA and Y34.CE1 other bump:1.30283 Ang S5.C and Y34.CE1 other bump:1.74705 Ang P6.N and Y34.CE1 other bump:1.33059 Ang S5.O and Y34.CE1 other bump:3.05008 Ang S5.CA and Y34.CD2 other bump:2.47699 Ang S5.C and Y34.CD1 other bump:1.96009 Ang S5.O and Y34.CD1 other bump:3.28759 Ang S5.C and Y34.CG other bump:2.54832 Ang V23.CB and E30.OE2 other bump:1.50398 Ang V23.CG1 and E30.OE2 other bump:2.70144 Ang F25.CE2 and E30.OE2 other bump:2.77194 Ang F25.CZ and E30.OE2 other bump:1.90936 Ang F25.CG and E30.OE1 other bump:2.43413 Ang F25.CD1 and E30.OE1 other bump:1.54904 Ang F25.CD2 and E30.OE1 other bump:1.88091 Ang F25.CE2 and E30.OE1 other bump:2.42143 Ang F25.CZ and E30.OE1 other bump:2.72913 Ang V23.CG1 and E30.CD other bump:2.88703 Ang F25.CG and E30.CD other bump:2.85528 Ang F25.CD1 and E30.CD other bump:2.60442 Ang F25.CD2 and E30.CD other bump:2.27686 Ang F25.CE2 and E30.CD other bump:2.25191 Ang F25.CZ and E30.CD other bump:2.65341 Ang F25.CD1 and E30.CG other bump:2.26467 Ang F25.CE1 and E30.CG other bump:2.24593 Ang S3.CB and L28.CD2 other bump:2.32056 Ang S3.CA and L28.CD1 other bump:2.39862 Ang S3.CB and L28.CD1 other bump:2.43599 Ang H2.O and L28.CD1 other bump:2.91035 Ang S3.N and L28.CD1 other bump:2.79549 Ang A24.CB and L28.CD1 other bump:3.16044 Ang S3.CA and L28.CG other bump:2.78089 Ang S3.CB and L28.CG other bump:2.89265 Ang F13.CD1 and K16.NZ other bump:2.1962 Ang F13.CE1 and K16.NZ other bump:2.33775 Ang H2.CD2 and N10.OD1 other bump:1.4628 Ang H2.NE2 and N10.OD1 other bump:2.36367 Ang H2.ND1 and N10.OD1 other bump:1.5295 Ang H2.CE1 and N10.OD1 other bump:2.24404 Ang H2.NE2 and N10.ND2 other bump:2.70125 Ang H2.ND1 and N10.ND2 other bump:1.50937 Ang H2.CE1 and N10.ND2 other bump:2.10675 Ang H2.NE2 and N10.CG other bump:1.54318 Ang H2.CE1 and N10.CG other bump:2.91586 Ang H2.CE1 and N10.CB other bump:1.75387 Ang F4.O and P6.CD other bump:2.19876 Ang F4.C and P6.CD neighbor-bump: 2.44741 Ang S5.N and P6.CD neighbor-bump: 2.43474 Ang S5.CA and P6.CD neighbor-bump: 1.78827 Ang S5.C and P6.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKIEDGK 1dxeA 85 :KRLLDIGFYNFLIPFVET Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues Number of specific fragments= 4 total=532 Number of alignments=164 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 5 :KTKVIGLI 1dxeA 17 :KQVQIGCW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues neighbor-bump: 2.59069 Ang G7.O and L8.CD2 other bump:2.29123 Ang K4.CE and I6.CD1 T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 25 :SALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 104 clashes (null) has 104 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.63951 Ang K14.NZ and G43.C other bump:2.46236 Ang K14.NZ and G43.CA other bump:1.57552 Ang K14.NZ and G43.N other bump:2.7399 Ang K14.CD and L42.C other bump:1.58793 Ang K14.CE and L42.C other bump:0.540716 Ang K14.NZ and L42.C other bump:1.77479 Ang K14.CE and L42.O other bump:1.01578 Ang K14.NZ and L42.O other bump:2.71548 Ang K14.CB and L42.CD2 other bump:2.80309 Ang K14.CG and L42.CD2 other bump:2.93165 Ang K14.CD and L42.CD2 other bump:2.89363 Ang K14.CE and L42.CD2 other bump:2.91992 Ang K14.CE and L42.CG other bump:3.12498 Ang K14.CD and L42.CB other bump:1.93915 Ang K14.CE and L42.CB other bump:2.81091 Ang K14.NZ and L42.CB other bump:2.2086 Ang K14.CD and L42.CA other bump:1.23496 Ang K14.CE and L42.CA other bump:1.77282 Ang K14.NZ and L42.CA other bump:3.13991 Ang K14.CD and L42.N other bump:2.63739 Ang K14.CE and L42.N other bump:2.72765 Ang K14.CD and A41.O other bump:2.62026 Ang I7.CD1 and G38.CA other bump:1.87584 Ang I7.CD1 and G38.N other bump:2.85753 Ang I7.CG1 and D37.C other bump:1.7675 Ang I7.CD1 and D37.C other bump:2.31277 Ang I7.CD1 and D37.O other bump:2.25316 Ang I7.CG1 and D37.CB other bump:2.3076 Ang I7.CD1 and D37.CB other bump:3.07471 Ang I7.CG1 and D37.CA other bump:2.47981 Ang I7.CD1 and D37.CA other bump:2.1803 Ang F25.CE1 and V35.CG2 other bump:3.05466 Ang F25.CE2 and V35.CG2 other bump:1.76836 Ang F25.CZ and V35.CG2 other bump:2.53904 Ang P6.CA and Y34.OH other bump:2.31159 Ang S5.N and Y34.OH other bump:2.03042 Ang S5.CA and Y34.OH other bump:1.7556 Ang S5.C and Y34.OH other bump:1.18108 Ang P6.N and Y34.OH other bump:1.84275 Ang P6.CD and Y34.OH other bump:2.97336 Ang S5.CB and Y34.CZ other bump:2.69582 Ang P6.CA and Y34.CZ other bump:2.81066 Ang S5.N and Y34.CZ other bump:1.75006 Ang S5.CA and Y34.CZ other bump:1.30956 Ang S5.C and Y34.CZ other bump:1.55315 Ang P6.N and Y34.CZ other bump:2.60681 Ang P6.CD and Y34.CZ other bump:2.22117 Ang S5.O and Y34.CZ other bump:3.02483 Ang S5.CB and Y34.CE2 other bump:3.16446 Ang S5.N and Y34.CE2 other bump:2.1149 Ang S5.CA and Y34.CE2 other bump:2.46907 Ang S5.C and Y34.CE2 other bump:2.91315 Ang P6.N and Y34.CE2 other bump:2.20806 Ang P6.CA and Y34.CE1 other bump:2.52305 Ang S5.CA and Y34.CE1 other bump:1.30283 Ang S5.C and Y34.CE1 other bump:1.74705 Ang P6.N and Y34.CE1 other bump:1.33059 Ang S5.O and Y34.CE1 other bump:3.05008 Ang S5.CA and Y34.CD2 other bump:2.47699 Ang S5.C and Y34.CD1 other bump:1.96009 Ang S5.O and Y34.CD1 other bump:3.28759 Ang S5.C and Y34.CG other bump:2.54832 Ang V23.CB and E30.OE2 other bump:1.50398 Ang V23.CG1 and E30.OE2 other bump:2.70144 Ang F25.CE2 and E30.OE2 other bump:2.77194 Ang F25.CZ and E30.OE2 other bump:1.90936 Ang F25.CG and E30.OE1 other bump:2.43413 Ang F25.CD1 and E30.OE1 other bump:1.54904 Ang F25.CD2 and E30.OE1 other bump:1.88091 Ang F25.CE2 and E30.OE1 other bump:2.42143 Ang F25.CZ and E30.OE1 other bump:2.72913 Ang V23.CG1 and E30.CD other bump:2.88703 Ang F25.CG and E30.CD other bump:2.85528 Ang F25.CD1 and E30.CD other bump:2.60442 Ang F25.CD2 and E30.CD other bump:2.27686 Ang F25.CE2 and E30.CD other bump:2.25191 Ang F25.CZ and E30.CD other bump:2.65341 Ang F25.CD1 and E30.CG other bump:2.26467 Ang F25.CE1 and E30.CG other bump:2.24593 Ang S3.CB and L28.CD2 other bump:2.32056 Ang S3.CA and L28.CD1 other bump:2.39862 Ang S3.CB and L28.CD1 other bump:2.43599 Ang H2.O and L28.CD1 other bump:2.91035 Ang S3.N and L28.CD1 other bump:2.79549 Ang A24.CB and L28.CD1 other bump:3.16044 Ang S3.CA and L28.CG other bump:2.78089 Ang S3.CB and L28.CG other bump:2.89265 Ang F13.CD1 and K16.NZ other bump:2.1962 Ang F13.CE1 and K16.NZ other bump:2.33775 Ang H2.CD2 and N10.OD1 other bump:1.4628 Ang H2.NE2 and N10.OD1 other bump:2.36367 Ang H2.ND1 and N10.OD1 other bump:1.5295 Ang H2.CE1 and N10.OD1 other bump:2.24404 Ang H2.NE2 and N10.ND2 other bump:2.70125 Ang H2.ND1 and N10.ND2 other bump:1.50937 Ang H2.CE1 and N10.ND2 other bump:2.10675 Ang H2.NE2 and N10.CG other bump:1.54318 Ang H2.CE1 and N10.CG other bump:2.91586 Ang H2.CE1 and N10.CB other bump:1.75387 Ang F4.O and P6.CD other bump:2.19876 Ang F4.C and P6.CD neighbor-bump: 2.44741 Ang S5.N and P6.CD neighbor-bump: 2.43474 Ang S5.CA and P6.CD neighbor-bump: 1.78827 Ang S5.C and P6.CD T0191 60 :IVGFNVTIPHKIEIMKY 1dxeA 69 :ASAPVVRVPTNEPVIIK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 83 :DAQLIGAVNTIKIEDG 1dxeA 86 :RLLDIGFYNFLIPFVE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues Number of specific fragments= 4 total=536 Number of alignments=165 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 43 :WLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.55229 Ang F35.CD2 and V37.C other bump:2.83109 Ang F35.CE2 and V37.C other bump:1.53479 Ang F35.CD2 and V37.O other bump:1.81821 Ang F35.CE2 and V37.O neighbor-bump: 2.66258 Ang D36.OD1 and V37.CG2 other bump:3.15164 Ang F35.CD2 and V37.CA other bump:2.62262 Ang F35.CD2 and V37.N other bump:3.05262 Ang F35.CE2 and V37.N self-bump: 1.26174 Ang D25.CA and D25.CB other bump:2.60616 Ang I3.CG2 and K24.NZ neighbor-bump: 2.23661 Ang S15.OG and P16.CD other bump:2.42359 Ang S13.OG and P16.CD other bump:2.47901 Ang V10.CG1 and H12.CE1 other bump:2.94667 Ang V10.CB and H12.ND1 other bump:2.24519 Ang V10.CG1 and H12.ND1 neighbor-bump: 2.60536 Ang H8.N and P9.CD neighbor-bump: 1.65074 Ang H8.C and P9.CD self-bump: 1.27382 Ang P9.N and P9.CD neighbor-bump: 2.06457 Ang H8.CA and P9.CD neighbor-bump: 2.16504 Ang H8.CB and P9.CD neighbor-bump: 2.71985 Ang H8.C and P9.CG self-bump: 2.1372 Ang P9.N and P9.CG neighbor-bump: 3.10009 Ang H8.CB and P9.CG T0191 47 :NLKYVIDGAKALGIVGFNV 1dxeA 79 :NEPVIIKRLLDIGFYNFLI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 Number of specific fragments= 2 total=538 Number of alignments=166 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 40 :GFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 28 clashes (null) has 28 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.55229 Ang F38.CD2 and V40.C other bump:2.83109 Ang F38.CE2 and V40.C other bump:1.53479 Ang F38.CD2 and V40.O other bump:1.81821 Ang F38.CE2 and V40.O neighbor-bump: 2.66258 Ang D39.OD1 and V40.CG2 other bump:3.15164 Ang F38.CD2 and V40.CA other bump:2.62262 Ang F38.CD2 and V40.N other bump:3.05262 Ang F38.CE2 and V40.N other bump:2.56212 Ang T3.CA and N32.OD1 other bump:1.02545 Ang T3.O and N32.OD1 other bump:1.92824 Ang T3.C and N32.OD1 other bump:2.17056 Ang T3.O and N32.CG other bump:3.14672 Ang T3.C and N32.CG self-bump: 1.26174 Ang D28.CA and D28.CB other bump:2.60616 Ang I6.CG2 and K27.NZ neighbor-bump: 2.23661 Ang S18.OG and P19.CD other bump:2.42359 Ang S16.OG and P19.CD other bump:2.47901 Ang V13.CG1 and H15.CE1 other bump:2.94667 Ang V13.CB and H15.ND1 other bump:2.24519 Ang V13.CG1 and H15.ND1 neighbor-bump: 2.60536 Ang H11.N and P12.CD neighbor-bump: 1.65074 Ang H11.C and P12.CD self-bump: 1.27382 Ang P12.N and P12.CD neighbor-bump: 2.06457 Ang H11.CA and P12.CD neighbor-bump: 2.16504 Ang H11.CB and P12.CD neighbor-bump: 2.71985 Ang H11.C and P12.CG self-bump: 2.1372 Ang P12.N and P12.CG neighbor-bump: 3.10009 Ang H11.CB and P12.CG T0191 47 :NLKYVIDGAKALGIVGFNV 1dxeA 79 :NEPVIIKRLLDIGFYNFLI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 Number of specific fragments= 2 total=540 Number of alignments=167 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 4 :AKTKVIGLI 1dxeA 16 :AKQVQIGCW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.59069 Ang G8.O and L9.CD2 other bump:2.29123 Ang K5.CE and I7.CD1 T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 25 :SALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 104 clashes (null) has 104 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 44 residues other bump:2.63951 Ang K14.NZ and G43.C other bump:2.46236 Ang K14.NZ and G43.CA other bump:1.57552 Ang K14.NZ and G43.N other bump:2.7399 Ang K14.CD and L42.C other bump:1.58793 Ang K14.CE and L42.C other bump:0.540716 Ang K14.NZ and L42.C other bump:1.77479 Ang K14.CE and L42.O other bump:1.01578 Ang K14.NZ and L42.O other bump:2.71548 Ang K14.CB and L42.CD2 other bump:2.80309 Ang K14.CG and L42.CD2 other bump:2.93165 Ang K14.CD and L42.CD2 other bump:2.89363 Ang K14.CE and L42.CD2 other bump:2.91992 Ang K14.CE and L42.CG other bump:3.12498 Ang K14.CD and L42.CB other bump:1.93915 Ang K14.CE and L42.CB other bump:2.81091 Ang K14.NZ and L42.CB other bump:2.2086 Ang K14.CD and L42.CA other bump:1.23496 Ang K14.CE and L42.CA other bump:1.77282 Ang K14.NZ and L42.CA other bump:3.13991 Ang K14.CD and L42.N other bump:2.63739 Ang K14.CE and L42.N other bump:2.72765 Ang K14.CD and A41.O other bump:2.62026 Ang I7.CD1 and G38.CA other bump:1.87584 Ang I7.CD1 and G38.N other bump:2.85753 Ang I7.CG1 and D37.C other bump:1.7675 Ang I7.CD1 and D37.C other bump:2.31277 Ang I7.CD1 and D37.O other bump:2.25316 Ang I7.CG1 and D37.CB other bump:2.3076 Ang I7.CD1 and D37.CB other bump:3.07471 Ang I7.CG1 and D37.CA other bump:2.47981 Ang I7.CD1 and D37.CA other bump:2.1803 Ang F25.CE1 and V35.CG2 other bump:3.05466 Ang F25.CE2 and V35.CG2 other bump:1.76836 Ang F25.CZ and V35.CG2 other bump:2.53904 Ang P6.CA and Y34.OH other bump:2.31159 Ang S5.N and Y34.OH other bump:2.03042 Ang S5.CA and Y34.OH other bump:1.7556 Ang S5.C and Y34.OH other bump:1.18108 Ang P6.N and Y34.OH other bump:1.84275 Ang P6.CD and Y34.OH other bump:2.97336 Ang S5.CB and Y34.CZ other bump:2.69582 Ang P6.CA and Y34.CZ other bump:2.81066 Ang S5.N and Y34.CZ other bump:1.75006 Ang S5.CA and Y34.CZ other bump:1.30956 Ang S5.C and Y34.CZ other bump:1.55315 Ang P6.N and Y34.CZ other bump:2.60681 Ang P6.CD and Y34.CZ other bump:2.22117 Ang S5.O and Y34.CZ other bump:3.02483 Ang S5.CB and Y34.CE2 other bump:3.16446 Ang S5.N and Y34.CE2 other bump:2.1149 Ang S5.CA and Y34.CE2 other bump:2.46907 Ang S5.C and Y34.CE2 other bump:2.91315 Ang P6.N and Y34.CE2 other bump:2.20806 Ang P6.CA and Y34.CE1 other bump:2.52305 Ang S5.CA and Y34.CE1 other bump:1.30283 Ang S5.C and Y34.CE1 other bump:1.74705 Ang P6.N and Y34.CE1 other bump:1.33059 Ang S5.O and Y34.CE1 other bump:3.05008 Ang S5.CA and Y34.CD2 other bump:2.47699 Ang S5.C and Y34.CD1 other bump:1.96009 Ang S5.O and Y34.CD1 other bump:3.28759 Ang S5.C and Y34.CG other bump:2.54832 Ang V23.CB and E30.OE2 other bump:1.50398 Ang V23.CG1 and E30.OE2 other bump:2.70144 Ang F25.CE2 and E30.OE2 other bump:2.77194 Ang F25.CZ and E30.OE2 other bump:1.90936 Ang F25.CG and E30.OE1 other bump:2.43413 Ang F25.CD1 and E30.OE1 other bump:1.54904 Ang F25.CD2 and E30.OE1 other bump:1.88091 Ang F25.CE2 and E30.OE1 other bump:2.42143 Ang F25.CZ and E30.OE1 other bump:2.72913 Ang V23.CG1 and E30.CD other bump:2.88703 Ang F25.CG and E30.CD other bump:2.85528 Ang F25.CD1 and E30.CD other bump:2.60442 Ang F25.CD2 and E30.CD other bump:2.27686 Ang F25.CE2 and E30.CD other bump:2.25191 Ang F25.CZ and E30.CD other bump:2.65341 Ang F25.CD1 and E30.CG other bump:2.26467 Ang F25.CE1 and E30.CG other bump:2.24593 Ang S3.CB and L28.CD2 other bump:2.32056 Ang S3.CA and L28.CD1 other bump:2.39862 Ang S3.CB and L28.CD1 other bump:2.43599 Ang H2.O and L28.CD1 other bump:2.91035 Ang S3.N and L28.CD1 other bump:2.79549 Ang A24.CB and L28.CD1 other bump:3.16044 Ang S3.CA and L28.CG other bump:2.78089 Ang S3.CB and L28.CG other bump:2.89265 Ang F13.CD1 and K16.NZ other bump:2.1962 Ang F13.CE1 and K16.NZ other bump:2.33775 Ang H2.CD2 and N10.OD1 other bump:1.4628 Ang H2.NE2 and N10.OD1 other bump:2.36367 Ang H2.ND1 and N10.OD1 other bump:1.5295 Ang H2.CE1 and N10.OD1 other bump:2.24404 Ang H2.NE2 and N10.ND2 other bump:2.70125 Ang H2.ND1 and N10.ND2 other bump:1.50937 Ang H2.CE1 and N10.ND2 other bump:2.10675 Ang H2.NE2 and N10.CG other bump:1.54318 Ang H2.CE1 and N10.CG other bump:2.91586 Ang H2.CE1 and N10.CB other bump:1.75387 Ang F4.O and P6.CD other bump:2.19876 Ang F4.C and P6.CD neighbor-bump: 2.44741 Ang S5.N and P6.CD neighbor-bump: 2.43474 Ang S5.CA and P6.CD neighbor-bump: 1.78827 Ang S5.C and P6.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKIEDGK 1dxeA 85 :KRLLDIGFYNFLIPFVET Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues Number of specific fragments= 4 total=544 Number of alignments=168 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 4 :AKTKVIGLIG 1dxeA 16 :AKQVQIGCWS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.59069 Ang G8.O and L9.CD2 other bump:2.29123 Ang K5.CE and I7.CD1 T0191 19 :SFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 26 :ALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 94 clashes (null) has 94 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 43 residues other bump:2.63951 Ang K13.NZ and G42.C other bump:2.46236 Ang K13.NZ and G42.CA other bump:1.57552 Ang K13.NZ and G42.N other bump:2.7399 Ang K13.CD and L41.C other bump:1.58793 Ang K13.CE and L41.C other bump:0.540716 Ang K13.NZ and L41.C other bump:1.77479 Ang K13.CE and L41.O other bump:1.01578 Ang K13.NZ and L41.O other bump:2.71548 Ang K13.CB and L41.CD2 other bump:2.80309 Ang K13.CG and L41.CD2 other bump:2.93165 Ang K13.CD and L41.CD2 other bump:2.89363 Ang K13.CE and L41.CD2 other bump:2.91992 Ang K13.CE and L41.CG other bump:3.12498 Ang K13.CD and L41.CB other bump:1.93915 Ang K13.CE and L41.CB other bump:2.81091 Ang K13.NZ and L41.CB other bump:2.2086 Ang K13.CD and L41.CA other bump:1.23496 Ang K13.CE and L41.CA other bump:1.77282 Ang K13.NZ and L41.CA other bump:3.13991 Ang K13.CD and L41.N other bump:2.63739 Ang K13.CE and L41.N other bump:2.72765 Ang K13.CD and A40.O other bump:2.62026 Ang I6.CD1 and G37.CA other bump:1.87584 Ang I6.CD1 and G37.N other bump:2.85753 Ang I6.CG1 and D36.C other bump:1.7675 Ang I6.CD1 and D36.C other bump:2.31277 Ang I6.CD1 and D36.O other bump:2.25316 Ang I6.CG1 and D36.CB other bump:2.3076 Ang I6.CD1 and D36.CB other bump:3.07471 Ang I6.CG1 and D36.CA other bump:2.47981 Ang I6.CD1 and D36.CA other bump:2.1803 Ang F24.CE1 and V34.CG2 other bump:3.05466 Ang F24.CE2 and V34.CG2 other bump:1.76836 Ang F24.CZ and V34.CG2 other bump:2.53904 Ang P5.CA and Y33.OH other bump:2.31159 Ang S4.N and Y33.OH other bump:2.03042 Ang S4.CA and Y33.OH other bump:1.7556 Ang S4.C and Y33.OH other bump:1.18108 Ang P5.N and Y33.OH other bump:1.84275 Ang P5.CD and Y33.OH other bump:2.97336 Ang S4.CB and Y33.CZ other bump:2.69582 Ang P5.CA and Y33.CZ other bump:2.81066 Ang S4.N and Y33.CZ other bump:1.75006 Ang S4.CA and Y33.CZ other bump:1.30956 Ang S4.C and Y33.CZ other bump:1.55315 Ang P5.N and Y33.CZ other bump:2.60681 Ang P5.CD and Y33.CZ other bump:2.22117 Ang S4.O and Y33.CZ other bump:3.02483 Ang S4.CB and Y33.CE2 other bump:3.16446 Ang S4.N and Y33.CE2 other bump:2.1149 Ang S4.CA and Y33.CE2 other bump:2.46907 Ang S4.C and Y33.CE2 other bump:2.91315 Ang P5.N and Y33.CE2 other bump:2.20806 Ang P5.CA and Y33.CE1 other bump:2.52305 Ang S4.CA and Y33.CE1 other bump:1.30283 Ang S4.C and Y33.CE1 other bump:1.74705 Ang P5.N and Y33.CE1 other bump:1.33059 Ang S4.O and Y33.CE1 other bump:3.05008 Ang S4.CA and Y33.CD2 other bump:2.47699 Ang S4.C and Y33.CD1 other bump:1.96009 Ang S4.O and Y33.CD1 other bump:3.28759 Ang S4.C and Y33.CG other bump:2.54832 Ang V22.CB and E29.OE2 other bump:1.50398 Ang V22.CG1 and E29.OE2 other bump:2.70144 Ang F24.CE2 and E29.OE2 other bump:2.77194 Ang F24.CZ and E29.OE2 other bump:1.90936 Ang F24.CG and E29.OE1 other bump:2.43413 Ang F24.CD1 and E29.OE1 other bump:1.54904 Ang F24.CD2 and E29.OE1 other bump:1.88091 Ang F24.CE2 and E29.OE1 other bump:2.42143 Ang F24.CZ and E29.OE1 other bump:2.72913 Ang V22.CG1 and E29.CD other bump:2.88703 Ang F24.CG and E29.CD other bump:2.85528 Ang F24.CD1 and E29.CD other bump:2.60442 Ang F24.CD2 and E29.CD other bump:2.27686 Ang F24.CE2 and E29.CD other bump:2.25191 Ang F24.CZ and E29.CD other bump:2.65341 Ang F24.CD1 and E29.CG other bump:2.26467 Ang F24.CE1 and E29.CG other bump:2.24593 Ang S2.CB and L27.CD2 other bump:2.32056 Ang S2.CA and L27.CD1 other bump:2.39862 Ang S2.CB and L27.CD1 other bump:2.43599 Ang G1.O and L27.CD1 other bump:2.91035 Ang S2.N and L27.CD1 other bump:2.79549 Ang A23.CB and L27.CD1 other bump:3.16044 Ang S2.CA and L27.CG other bump:2.7809 Ang S2.CB and L27.CG other bump:2.89265 Ang F12.CD1 and K15.NZ other bump:2.1962 Ang F12.CE1 and K15.NZ other bump:1.75387 Ang F3.O and P5.CD other bump:2.19876 Ang F3.C and P5.CD neighbor-bump: 2.44741 Ang S4.N and P5.CD neighbor-bump: 2.43474 Ang S4.CA and P5.CD neighbor-bump: 1.78827 Ang S4.C and P5.CD T0191 60 :IVGFNVTIPHKIEIMK 1dxeA 69 :ASAPVVRVPTNEPVII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:3.22819 Ang I9.CG2 and H11.C other bump:2.3334 Ang I9.CG2 and H11.O T0191 82 :KDAQLIGAVNTIKI 1dxeA 85 :KRLLDIGFYNFLIP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues Number of specific fragments= 4 total=548 Number of alignments=169 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 43 :WLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.55229 Ang F35.CD2 and V37.C other bump:2.83109 Ang F35.CE2 and V37.C other bump:1.53479 Ang F35.CD2 and V37.O other bump:1.81821 Ang F35.CE2 and V37.O neighbor-bump: 2.66258 Ang D36.OD1 and V37.CG2 other bump:3.15164 Ang F35.CD2 and V37.CA other bump:2.62262 Ang F35.CD2 and V37.N other bump:3.05262 Ang F35.CE2 and V37.N self-bump: 1.26174 Ang D25.CA and D25.CB other bump:2.60616 Ang I3.CG2 and K24.NZ neighbor-bump: 2.23661 Ang S15.OG and P16.CD other bump:2.42359 Ang S13.OG and P16.CD other bump:2.47901 Ang V10.CG1 and H12.CE1 other bump:2.94667 Ang V10.CB and H12.ND1 other bump:2.24519 Ang V10.CG1 and H12.ND1 neighbor-bump: 2.60536 Ang H8.N and P9.CD neighbor-bump: 1.65074 Ang H8.C and P9.CD self-bump: 1.27382 Ang P9.N and P9.CD neighbor-bump: 2.06457 Ang H8.CA and P9.CD neighbor-bump: 2.16504 Ang H8.CB and P9.CD neighbor-bump: 2.71985 Ang H8.C and P9.CG self-bump: 2.1372 Ang P9.N and P9.CG neighbor-bump: 3.10009 Ang H8.CB and P9.CG T0191 47 :NLKYVIDGAKALGIVGFNV 1dxeA 79 :NEPVIIKRLLDIGFYNFLI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 Number of specific fragments= 2 total=550 Number of alignments=170 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1dxeA 40 :GFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPT Fragment has 28 clashes (null) has 28 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.55229 Ang F38.CD2 and V40.C other bump:2.83109 Ang F38.CE2 and V40.C other bump:1.53479 Ang F38.CD2 and V40.O other bump:1.81821 Ang F38.CE2 and V40.O neighbor-bump: 2.66258 Ang D39.OD1 and V40.CG2 other bump:3.15164 Ang F38.CD2 and V40.CA other bump:2.62262 Ang F38.CD2 and V40.N other bump:3.05262 Ang F38.CE2 and V40.N other bump:2.56212 Ang T3.CA and N32.OD1 other bump:1.02545 Ang T3.O and N32.OD1 other bump:1.92824 Ang T3.C and N32.OD1 other bump:2.17056 Ang T3.O and N32.CG other bump:3.14672 Ang T3.C and N32.CG self-bump: 1.26174 Ang D28.CA and D28.CB other bump:2.60616 Ang I6.CG2 and K27.NZ neighbor-bump: 2.23661 Ang S18.OG and P19.CD other bump:2.42359 Ang S16.OG and P19.CD other bump:2.47901 Ang V13.CG1 and H15.CE1 other bump:2.94667 Ang V13.CB and H15.ND1 other bump:2.24519 Ang V13.CG1 and H15.ND1 neighbor-bump: 2.60536 Ang H11.N and P12.CD neighbor-bump: 1.65074 Ang H11.C and P12.CD self-bump: 1.27382 Ang P12.N and P12.CD neighbor-bump: 2.06457 Ang H11.CA and P12.CD neighbor-bump: 2.16504 Ang H11.CB and P12.CD neighbor-bump: 2.71985 Ang H11.C and P12.CG self-bump: 2.1372 Ang P12.N and P12.CG neighbor-bump: 3.10009 Ang H11.CB and P12.CG T0191 47 :NLKYVIDGAKALGIVGFNVTI 1dxeA 79 :NEPVIIKRLLDIGFYNFLIPF Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues neighbor-bump: 2.62737 Ang N2.O and L3.CD2 T0191 68 :PHKIEIM 1dxeA 101 :ETKEEAE Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues other bump:3.14493 Ang H3.ND1 and I5.CD1 other bump:2.59828 Ang H3.CE1 and I5.CD1 other bump:2.76294 Ang H3.ND1 and I5.CG1 other bump:2.5334 Ang H3.CE1 and I5.CG1 other bump:2.82097 Ang H3.ND1 and I5.CB other bump:3.16027 Ang H3.ND1 and I5.CA other bump:2.42326 Ang H3.ND1 and I5.N Number of specific fragments= 3 total=553 Number of alignments=171 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-local-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-local-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 27 :LSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 87 clashes (null) has 87 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 42 residues other bump:2.63951 Ang K12.NZ and G41.C other bump:2.46236 Ang K12.NZ and G41.CA other bump:1.57552 Ang K12.NZ and G41.N other bump:2.7399 Ang K12.CD and L40.C other bump:1.58793 Ang K12.CE and L40.C other bump:0.540716 Ang K12.NZ and L40.C other bump:1.77479 Ang K12.CE and L40.O other bump:1.01578 Ang K12.NZ and L40.O other bump:2.71548 Ang K12.CB and L40.CD2 other bump:2.80309 Ang K12.CG and L40.CD2 other bump:2.93165 Ang K12.CD and L40.CD2 other bump:2.89363 Ang K12.CE and L40.CD2 other bump:2.91992 Ang K12.CE and L40.CG other bump:3.12498 Ang K12.CD and L40.CB other bump:1.93915 Ang K12.CE and L40.CB other bump:2.81091 Ang K12.NZ and L40.CB other bump:2.2086 Ang K12.CD and L40.CA other bump:1.23496 Ang K12.CE and L40.CA other bump:1.77282 Ang K12.NZ and L40.CA other bump:3.13991 Ang K12.CD and L40.N other bump:2.63739 Ang K12.CE and L40.N other bump:2.72765 Ang K12.CD and A39.O other bump:2.62026 Ang I5.CD1 and G36.CA other bump:1.87584 Ang I5.CD1 and G36.N other bump:2.85753 Ang I5.CG1 and D35.C other bump:1.7675 Ang I5.CD1 and D35.C other bump:2.31277 Ang I5.CD1 and D35.O other bump:2.25316 Ang I5.CG1 and D35.CB other bump:2.3076 Ang I5.CD1 and D35.CB other bump:3.07471 Ang I5.CG1 and D35.CA other bump:2.47981 Ang I5.CD1 and D35.CA other bump:2.1803 Ang F23.CE1 and V33.CG2 other bump:3.05466 Ang F23.CE2 and V33.CG2 other bump:1.76836 Ang F23.CZ and V33.CG2 other bump:2.53904 Ang P4.CA and Y32.OH other bump:2.31159 Ang S3.N and Y32.OH other bump:2.03042 Ang S3.CA and Y32.OH other bump:1.7556 Ang S3.C and Y32.OH other bump:1.18108 Ang P4.N and Y32.OH other bump:1.84275 Ang P4.CD and Y32.OH other bump:2.97336 Ang S3.CB and Y32.CZ other bump:2.69582 Ang P4.CA and Y32.CZ other bump:2.81066 Ang S3.N and Y32.CZ other bump:1.75006 Ang S3.CA and Y32.CZ other bump:1.30956 Ang S3.C and Y32.CZ other bump:1.55315 Ang P4.N and Y32.CZ other bump:2.60681 Ang P4.CD and Y32.CZ other bump:2.22117 Ang S3.O and Y32.CZ other bump:3.02483 Ang S3.CB and Y32.CE2 other bump:3.16446 Ang S3.N and Y32.CE2 other bump:2.1149 Ang S3.CA and Y32.CE2 other bump:2.46907 Ang S3.C and Y32.CE2 other bump:2.91315 Ang P4.N and Y32.CE2 other bump:2.20806 Ang P4.CA and Y32.CE1 other bump:2.52305 Ang S3.CA and Y32.CE1 other bump:1.30283 Ang S3.C and Y32.CE1 other bump:1.74705 Ang P4.N and Y32.CE1 other bump:1.33059 Ang S3.O and Y32.CE1 other bump:3.05008 Ang S3.CA and Y32.CD2 other bump:2.47699 Ang S3.C and Y32.CD1 other bump:1.96009 Ang S3.O and Y32.CD1 other bump:3.28759 Ang S3.C and Y32.CG other bump:2.54832 Ang V21.CB and E28.OE2 other bump:1.50398 Ang V21.CG1 and E28.OE2 other bump:2.70144 Ang F23.CE2 and E28.OE2 other bump:2.77194 Ang F23.CZ and E28.OE2 other bump:1.90936 Ang F23.CG and E28.OE1 other bump:2.43413 Ang F23.CD1 and E28.OE1 other bump:1.54904 Ang F23.CD2 and E28.OE1 other bump:1.88091 Ang F23.CE2 and E28.OE1 other bump:2.42143 Ang F23.CZ and E28.OE1 other bump:2.72913 Ang V21.CG1 and E28.CD other bump:2.88703 Ang F23.CG and E28.CD other bump:2.85528 Ang F23.CD1 and E28.CD other bump:2.60442 Ang F23.CD2 and E28.CD other bump:2.27686 Ang F23.CE2 and E28.CD other bump:2.25191 Ang F23.CZ and E28.CD other bump:2.65341 Ang F23.CD1 and E28.CG other bump:2.26467 Ang F23.CE1 and E28.CG other bump:2.79549 Ang A22.CB and L26.CD1 other bump:2.89265 Ang F11.CD1 and K14.NZ other bump:2.1962 Ang F11.CE1 and K14.NZ other bump:1.75387 Ang F2.O and P4.CD other bump:2.19876 Ang F2.C and P4.CD neighbor-bump: 2.44741 Ang S3.N and P4.CD neighbor-bump: 2.43474 Ang S3.CA and P4.CD neighbor-bump: 1.78827 Ang S3.C and P4.CD Number of specific fragments= 1 total=554 Number of alignments=172 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-local-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-local-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 29 :FKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 36 :LGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 45 clashes (null) has 45 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 33 residues other bump:2.63949 Ang K3.NZ and G32.C other bump:2.46235 Ang K3.NZ and G32.CA other bump:1.57552 Ang K3.NZ and G32.N other bump:2.73991 Ang K3.CD and L31.C other bump:1.58792 Ang K3.CE and L31.C other bump:0.540735 Ang K3.NZ and L31.C other bump:1.77479 Ang K3.CE and L31.O other bump:1.0158 Ang K3.NZ and L31.O other bump:2.71548 Ang K3.CB and L31.CD2 other bump:2.8031 Ang K3.CG and L31.CD2 other bump:2.93167 Ang K3.CD and L31.CD2 other bump:2.89365 Ang K3.CE and L31.CD2 other bump:2.91994 Ang K3.CE and L31.CG other bump:3.125 Ang K3.CD and L31.CB other bump:1.93917 Ang K3.CE and L31.CB other bump:2.81094 Ang K3.NZ and L31.CB other bump:2.20861 Ang K3.CD and L31.CA other bump:1.23496 Ang K3.CE and L31.CA other bump:1.77283 Ang K3.NZ and L31.CA other bump:3.13992 Ang K3.CD and L31.N other bump:2.63739 Ang K3.CE and L31.N other bump:2.72764 Ang K3.CD and A30.O other bump:2.1803 Ang F14.CE1 and V24.CG2 other bump:1.76836 Ang F14.CZ and V24.CG2 other bump:3.05466 Ang F14.CE2 and V24.CG2 other bump:2.54832 Ang V12.CB and E19.OE2 other bump:1.50398 Ang V12.CG1 and E19.OE2 other bump:2.77194 Ang F14.CZ and E19.OE2 other bump:2.70144 Ang F14.CE2 and E19.OE2 other bump:1.90936 Ang F14.CG and E19.OE1 other bump:2.43413 Ang F14.CD1 and E19.OE1 other bump:2.42143 Ang F14.CZ and E19.OE1 other bump:1.54904 Ang F14.CD2 and E19.OE1 other bump:1.88091 Ang F14.CE2 and E19.OE1 other bump:2.72913 Ang V12.CG1 and E19.CD other bump:2.88703 Ang F14.CG and E19.CD other bump:2.85528 Ang F14.CD1 and E19.CD other bump:2.25191 Ang F14.CZ and E19.CD other bump:2.60442 Ang F14.CD2 and E19.CD other bump:2.27686 Ang F14.CE2 and E19.CD other bump:2.26467 Ang F14.CE1 and E19.CG other bump:2.65341 Ang F14.CD1 and E19.CG other bump:2.79549 Ang A13.CB and L17.CD1 other bump:2.89266 Ang F2.CD1 and K5.NZ other bump:2.1962 Ang F2.CE1 and K5.NZ Number of specific fragments= 1 total=555 Number of alignments=173 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-simpleSW-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-simpleSW-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 64 :NVTIPHKIEIMKYLDEID 1dxeA 145 :NITILVQIESQQGVDNVD Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.75175 Ang L15.CA and I18.CD1 other bump:2.42447 Ang L15.CD1 and I18.CD1 other bump:2.94433 Ang L15.CA and I18.CG1 other bump:2.8399 Ang I9.CG1 and Y14.OH other bump:2.18483 Ang I9.CD1 and Y14.OH other bump:2.38152 Ang I9.CG1 and Y14.CZ other bump:1.20379 Ang I9.CD1 and Y14.CZ other bump:2.7683 Ang I9.CG2 and Y14.CE2 other bump:2.52424 Ang I9.CA and Y14.CE2 other bump:3.09679 Ang I9.N and Y14.CE2 other bump:2.13242 Ang I9.CB and Y14.CE2 other bump:1.25749 Ang I9.CG1 and Y14.CE2 other bump:0.51554 Ang I9.CD1 and Y14.CE2 other bump:2.2298 Ang I9.CD1 and Y14.CE1 other bump:2.06593 Ang I9.CG2 and Y14.CD2 other bump:2.29781 Ang I9.CA and Y14.CD2 other bump:2.12432 Ang I9.CB and Y14.CD2 other bump:2.17781 Ang I9.CG1 and Y14.CD2 other bump:1.59705 Ang I9.CD1 and Y14.CD2 other bump:2.68949 Ang I9.CD1 and Y14.CD1 other bump:3.12432 Ang I9.CA and Y14.CG other bump:2.47717 Ang I9.CD1 and Y14.CG other bump:2.81849 Ang I11.CG2 and Y14.N Number of specific fragments= 1 total=556 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-simpleSW-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-simpleSW-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set Number of specific fragments= 0 total=556 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-vit-adpstyle1.pw.a2m.gz # 1dxeA read from T0191-1dxeA-vit-adpstyle1.pw.a2m.gz # found chain 1dxeA in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 27 :LSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 87 clashes (null) has 87 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 42 residues other bump:2.63951 Ang K12.NZ and G41.C other bump:2.46236 Ang K12.NZ and G41.CA other bump:1.57552 Ang K12.NZ and G41.N other bump:2.7399 Ang K12.CD and L40.C other bump:1.58793 Ang K12.CE and L40.C other bump:0.540716 Ang K12.NZ and L40.C other bump:1.77479 Ang K12.CE and L40.O other bump:1.01578 Ang K12.NZ and L40.O other bump:2.71548 Ang K12.CB and L40.CD2 other bump:2.80309 Ang K12.CG and L40.CD2 other bump:2.93165 Ang K12.CD and L40.CD2 other bump:2.89363 Ang K12.CE and L40.CD2 other bump:2.91992 Ang K12.CE and L40.CG other bump:3.12498 Ang K12.CD and L40.CB other bump:1.93915 Ang K12.CE and L40.CB other bump:2.81091 Ang K12.NZ and L40.CB other bump:2.2086 Ang K12.CD and L40.CA other bump:1.23496 Ang K12.CE and L40.CA other bump:1.77282 Ang K12.NZ and L40.CA other bump:3.13991 Ang K12.CD and L40.N other bump:2.63739 Ang K12.CE and L40.N other bump:2.72765 Ang K12.CD and A39.O other bump:2.62026 Ang I5.CD1 and G36.CA other bump:1.87584 Ang I5.CD1 and G36.N other bump:2.85753 Ang I5.CG1 and D35.C other bump:1.7675 Ang I5.CD1 and D35.C other bump:2.31277 Ang I5.CD1 and D35.O other bump:2.25316 Ang I5.CG1 and D35.CB other bump:2.3076 Ang I5.CD1 and D35.CB other bump:3.07471 Ang I5.CG1 and D35.CA other bump:2.47981 Ang I5.CD1 and D35.CA other bump:2.1803 Ang F23.CE1 and V33.CG2 other bump:3.05466 Ang F23.CE2 and V33.CG2 other bump:1.76836 Ang F23.CZ and V33.CG2 other bump:2.53904 Ang P4.CA and Y32.OH other bump:2.31159 Ang S3.N and Y32.OH other bump:2.03042 Ang S3.CA and Y32.OH other bump:1.7556 Ang S3.C and Y32.OH other bump:1.18108 Ang P4.N and Y32.OH other bump:1.84275 Ang P4.CD and Y32.OH other bump:2.97336 Ang S3.CB and Y32.CZ other bump:2.69582 Ang P4.CA and Y32.CZ other bump:2.81066 Ang S3.N and Y32.CZ other bump:1.75006 Ang S3.CA and Y32.CZ other bump:1.30956 Ang S3.C and Y32.CZ other bump:1.55315 Ang P4.N and Y32.CZ other bump:2.60681 Ang P4.CD and Y32.CZ other bump:2.22117 Ang S3.O and Y32.CZ other bump:3.02483 Ang S3.CB and Y32.CE2 other bump:3.16446 Ang S3.N and Y32.CE2 other bump:2.1149 Ang S3.CA and Y32.CE2 other bump:2.46907 Ang S3.C and Y32.CE2 other bump:2.91315 Ang P4.N and Y32.CE2 other bump:2.20806 Ang P4.CA and Y32.CE1 other bump:2.52305 Ang S3.CA and Y32.CE1 other bump:1.30283 Ang S3.C and Y32.CE1 other bump:1.74705 Ang P4.N and Y32.CE1 other bump:1.33059 Ang S3.O and Y32.CE1 other bump:3.05008 Ang S3.CA and Y32.CD2 other bump:2.47699 Ang S3.C and Y32.CD1 other bump:1.96009 Ang S3.O and Y32.CD1 other bump:3.28759 Ang S3.C and Y32.CG other bump:2.54832 Ang V21.CB and E28.OE2 other bump:1.50398 Ang V21.CG1 and E28.OE2 other bump:2.70144 Ang F23.CE2 and E28.OE2 other bump:2.77194 Ang F23.CZ and E28.OE2 other bump:1.90936 Ang F23.CG and E28.OE1 other bump:2.43413 Ang F23.CD1 and E28.OE1 other bump:1.54904 Ang F23.CD2 and E28.OE1 other bump:1.88091 Ang F23.CE2 and E28.OE1 other bump:2.42143 Ang F23.CZ and E28.OE1 other bump:2.72913 Ang V21.CG1 and E28.CD other bump:2.88703 Ang F23.CG and E28.CD other bump:2.85528 Ang F23.CD1 and E28.CD other bump:2.60442 Ang F23.CD2 and E28.CD other bump:2.27686 Ang F23.CE2 and E28.CD other bump:2.25191 Ang F23.CZ and E28.CD other bump:2.65341 Ang F23.CD1 and E28.CG other bump:2.26467 Ang F23.CE1 and E28.CG other bump:2.79549 Ang A22.CB and L26.CD1 other bump:2.89265 Ang F11.CD1 and K14.NZ other bump:2.1962 Ang F11.CE1 and K14.NZ other bump:1.75387 Ang F2.O and P4.CD other bump:2.19876 Ang F2.C and P4.CD neighbor-bump: 2.44741 Ang S3.N and P4.CD neighbor-bump: 2.43474 Ang S3.CA and P4.CD neighbor-bump: 1.78827 Ang S3.C and P4.CD Number of specific fragments= 1 total=557 Number of alignments=174 # Reading fragments from alignment file # T0191 read from T0191-1dxeA-vit-adpstyle5.pw.a2m.gz # 1dxeA read from T0191-1dxeA-vit-adpstyle5.pw.a2m.gz # found chain 1dxeA in template set T0191 29 :FKDKGLNYVYVAFDVLPENLKYVIDGAKALG 1dxeA 36 :LGLAGFDWLVLDGEHAPNDISTFIPQLMALK Fragment has 45 clashes (null) has 45 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 33 residues other bump:2.63949 Ang K3.NZ and G32.C other bump:2.46235 Ang K3.NZ and G32.CA other bump:1.57552 Ang K3.NZ and G32.N other bump:2.73991 Ang K3.CD and L31.C other bump:1.58792 Ang K3.CE and L31.C other bump:0.540735 Ang K3.NZ and L31.C other bump:1.77479 Ang K3.CE and L31.O other bump:1.0158 Ang K3.NZ and L31.O other bump:2.71548 Ang K3.CB and L31.CD2 other bump:2.8031 Ang K3.CG and L31.CD2 other bump:2.93167 Ang K3.CD and L31.CD2 other bump:2.89365 Ang K3.CE and L31.CD2 other bump:2.91994 Ang K3.CE and L31.CG other bump:3.125 Ang K3.CD and L31.CB other bump:1.93917 Ang K3.CE and L31.CB other bump:2.81094 Ang K3.NZ and L31.CB other bump:2.20861 Ang K3.CD and L31.CA other bump:1.23496 Ang K3.CE and L31.CA other bump:1.77283 Ang K3.NZ and L31.CA other bump:3.13992 Ang K3.CD and L31.N other bump:2.63739 Ang K3.CE and L31.N other bump:2.72764 Ang K3.CD and A30.O other bump:2.1803 Ang F14.CE1 and V24.CG2 other bump:1.76836 Ang F14.CZ and V24.CG2 other bump:3.05466 Ang F14.CE2 and V24.CG2 other bump:2.54832 Ang V12.CB and E19.OE2 other bump:1.50398 Ang V12.CG1 and E19.OE2 other bump:2.77194 Ang F14.CZ and E19.OE2 other bump:2.70144 Ang F14.CE2 and E19.OE2 other bump:1.90936 Ang F14.CG and E19.OE1 other bump:2.43413 Ang F14.CD1 and E19.OE1 other bump:2.42143 Ang F14.CZ and E19.OE1 other bump:1.54904 Ang F14.CD2 and E19.OE1 other bump:1.88091 Ang F14.CE2 and E19.OE1 other bump:2.72913 Ang V12.CG1 and E19.CD other bump:2.88703 Ang F14.CG and E19.CD other bump:2.85528 Ang F14.CD1 and E19.CD other bump:2.25191 Ang F14.CZ and E19.CD other bump:2.60442 Ang F14.CD2 and E19.CD other bump:2.27686 Ang F14.CE2 and E19.CD other bump:2.26467 Ang F14.CE1 and E19.CG other bump:2.65341 Ang F14.CD1 and E19.CG other bump:2.79549 Ang A13.CB and L17.CD1 other bump:2.89266 Ang F2.CD1 and K5.NZ other bump:2.1962 Ang F2.CE1 and K5.NZ Number of specific fragments= 1 total=558 Number of alignments=175 # command:# Prefix for input files set to 1jr2A/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1jr2A-T0191-local-adpstyle1.pw.a2m.gz # 1jr2A read from 1jr2A-T0191-local-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 26 :NAAFKDKGLNYVYVAFDVLPENL 1jr2A 229 :ARALAAQGLPVSCTAESPTPQAL Fragment has 32 clashes (null) has 32 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:1.70223 Ang D18.CG and N23.OD1 other bump:0.788221 Ang D18.OD1 and N23.OD1 other bump:2.30748 Ang D18.OD2 and N23.OD1 other bump:2.83487 Ang D18.CG and N23.CG other bump:1.90841 Ang D18.OD1 and N23.CG other bump:2.73625 Ang D18.OD1 and N23.CB other bump:3.00182 Ang Y12.CE2 and V15.CG1 other bump:2.28815 Ang Y12.CE2 and V15.CB other bump:2.87909 Ang Y12.CZ and V15.CB other bump:2.79361 Ang Y12.OH and V15.CB other bump:2.42839 Ang Y12.CE2 and V15.CA other bump:2.38569 Ang Y12.CZ and V15.CA other bump:1.73606 Ang Y12.OH and V15.CA other bump:2.3263 Ang Y12.CE2 and V15.N other bump:2.37719 Ang Y12.CZ and V15.N other bump:2.10513 Ang Y12.OH and V15.N other bump:2.3237 Ang Y12.CE2 and Y14.C other bump:1.92907 Ang Y12.CZ and Y14.C other bump:2.00024 Ang Y12.OH and Y14.C other bump:2.73272 Ang Y12.CE1 and Y14.C other bump:2.20143 Ang Y12.CE2 and Y14.O other bump:1.16658 Ang Y12.CZ and Y14.O other bump:1.5381 Ang Y12.OH and Y14.O other bump:2.66746 Ang Y12.CD1 and Y14.O other bump:1.59211 Ang Y12.CE1 and Y14.O neighbor-bump: 2.64101 Ang V13.O and Y14.CD1 neighbor-bump: 2.74075 Ang V13.CG2 and Y14.CD1 other bump:2.29174 Ang N2.ND2 and Y12.CD2 other bump:2.39125 Ang N2.ND2 and Y12.CG other bump:2.48737 Ang N2.ND2 and Y12.CB other bump:1.87405 Ang A3.O and D7.OD2 other bump:2.70655 Ang A3.C and D7.OD2 Number of specific fragments= 1 total=559 Number of alignments=176 # Reading fragments from alignment file # T0191 read from 1jr2A-T0191-local-adpstyle5.pw.a2m.gz # 1jr2A read from 1jr2A-T0191-local-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 52 :IDGAKALGIV 1jr2A 152 :PKALKDKGIA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.72825 Ang I2.CG2 and K6.NZ other bump:2.54419 Ang I2.CG2 and K6.CE Number of specific fragments= 1 total=560 # Reading fragments from alignment file # T0191 read from 1jr2A-T0191-vit-adpstyle1.pw.a2m.gz # 1jr2A read from 1jr2A-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 26 :NAAFKDKGLNYVYVAFDVLPENL 1jr2A 229 :ARALAAQGLPVSCTAESPTPQAL Fragment has 32 clashes (null) has 32 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:1.70223 Ang D18.CG and N23.OD1 other bump:0.788221 Ang D18.OD1 and N23.OD1 other bump:2.30748 Ang D18.OD2 and N23.OD1 other bump:2.83487 Ang D18.CG and N23.CG other bump:1.90841 Ang D18.OD1 and N23.CG other bump:2.73625 Ang D18.OD1 and N23.CB other bump:3.00182 Ang Y12.CE2 and V15.CG1 other bump:2.28815 Ang Y12.CE2 and V15.CB other bump:2.87909 Ang Y12.CZ and V15.CB other bump:2.79361 Ang Y12.OH and V15.CB other bump:2.42839 Ang Y12.CE2 and V15.CA other bump:2.38569 Ang Y12.CZ and V15.CA other bump:1.73606 Ang Y12.OH and V15.CA other bump:2.3263 Ang Y12.CE2 and V15.N other bump:2.37719 Ang Y12.CZ and V15.N other bump:2.10513 Ang Y12.OH and V15.N other bump:2.3237 Ang Y12.CE2 and Y14.C other bump:1.92907 Ang Y12.CZ and Y14.C other bump:2.00024 Ang Y12.OH and Y14.C other bump:2.73272 Ang Y12.CE1 and Y14.C other bump:2.20143 Ang Y12.CE2 and Y14.O other bump:1.16658 Ang Y12.CZ and Y14.O other bump:1.5381 Ang Y12.OH and Y14.O other bump:2.66746 Ang Y12.CD1 and Y14.O other bump:1.59211 Ang Y12.CE1 and Y14.O neighbor-bump: 2.64101 Ang V13.O and Y14.CD1 neighbor-bump: 2.74075 Ang V13.CG2 and Y14.CD1 other bump:2.29174 Ang N2.ND2 and Y12.CD2 other bump:2.39125 Ang N2.ND2 and Y12.CG other bump:2.48737 Ang N2.ND2 and Y12.CB other bump:1.87405 Ang A3.O and D7.OD2 other bump:2.70655 Ang A3.C and D7.OD2 Number of specific fragments= 1 total=561 Number of alignments=177 # Reading fragments from alignment file # T0191 read from 1jr2A-T0191-vit-adpstyle5.pw.a2m.gz # 1jr2A read from 1jr2A-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 52 :IDGAKALGIV 1jr2A 152 :PKALKDKGIA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.72825 Ang I2.CG2 and K6.NZ other bump:2.54419 Ang I2.CG2 and K6.CE Number of specific fragments= 1 total=562 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEI 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O T0191 97 :DGK 1jr2A 77 :NNK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 4 total=566 Number of alignments=178 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLI 1jr2A 2 :KVLLL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues T0191 13 :GHPVEHSFSPIM 1jr2A 9 :AKEDDCGQDPYI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues T0191 27 :AAFKDKGLNYVYVAFDV 1jr2A 21 :RELGLYGLEATLIPVLS Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.49057 Ang L9.CD2 and Y11.OH other bump:1.6913 Ang F4.CD2 and Y11.OH other bump:2.49858 Ang F4.CE2 and Y11.OH other bump:2.51118 Ang F4.CG and Y11.OH other bump:2.2424 Ang F4.CB and Y11.CZ other bump:2.04606 Ang F4.CD2 and Y11.CZ other bump:3.02932 Ang F4.CE2 and Y11.CZ other bump:1.97969 Ang F4.CG and Y11.CZ other bump:2.89253 Ang F4.CB and Y11.CE2 other bump:2.48912 Ang F4.CD2 and Y11.CE2 other bump:2.16973 Ang F4.CG and Y11.CE2 other bump:2.39837 Ang F4.CD1 and Y11.CE2 other bump:2.89378 Ang F4.CE1 and Y11.CE2 other bump:3.15031 Ang F4.CZ and Y11.CE2 other bump:2.9925 Ang F4.CA and Y11.CE1 other bump:2.50445 Ang L9.CB and Y11.CE1 other bump:1.87563 Ang F4.CB and Y11.CE1 other bump:3.23426 Ang F4.C and Y11.CE1 other bump:2.55745 Ang F4.CG and Y11.CE1 other bump:2.82791 Ang F4.CG and Y11.CD2 other bump:2.63249 Ang F4.CD1 and Y11.CD2 other bump:2.43791 Ang L9.O and Y11.CD1 other bump:2.30404 Ang F4.CB and Y11.CD1 other bump:2.90628 Ang F4.CB and Y11.CG T0191 45 :PENLKYVIDGAKAL 1jr2A 40 :FLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.60722 Ang Y7.O and D10.OD1 other bump:2.46644 Ang Y7.C and D10.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKD 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNK Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 5 total=571 Number of alignments=179 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYL 1jr2A 55 :DYGGLIFTSPRAVEAAELC Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=574 Number of alignments=180 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 6 :TKVIGLIGHPVEHSFSPIMH 1jr2A 2 :KVLLLKDAKEDDCGQDPYIR Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.68256 Ang I5.CD1 and I19.CG2 other bump:2.66446 Ang I5.CG2 and L7.CD1 other bump:2.58662 Ang I5.CG2 and L7.CG T0191 28 :AFKDKGLNYVYVAFDV 1jr2A 22 :ELGLYGLEATLIPVLS Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:2.49057 Ang L8.CD2 and Y10.OH other bump:1.6913 Ang F3.CD2 and Y10.OH other bump:2.49858 Ang F3.CE2 and Y10.OH other bump:2.51118 Ang F3.CG and Y10.OH other bump:2.2424 Ang F3.CB and Y10.CZ other bump:2.04606 Ang F3.CD2 and Y10.CZ other bump:3.02932 Ang F3.CE2 and Y10.CZ other bump:1.97969 Ang F3.CG and Y10.CZ other bump:2.89253 Ang F3.CB and Y10.CE2 other bump:2.48912 Ang F3.CD2 and Y10.CE2 other bump:2.16973 Ang F3.CG and Y10.CE2 other bump:2.39837 Ang F3.CD1 and Y10.CE2 other bump:2.89378 Ang F3.CE1 and Y10.CE2 other bump:3.15031 Ang F3.CZ and Y10.CE2 other bump:2.9925 Ang F3.CA and Y10.CE1 other bump:2.50445 Ang L8.CB and Y10.CE1 other bump:1.87563 Ang F3.CB and Y10.CE1 other bump:3.23426 Ang F3.C and Y10.CE1 other bump:2.55745 Ang F3.CG and Y10.CE1 other bump:2.82791 Ang F3.CG and Y10.CD2 other bump:2.63249 Ang F3.CD1 and Y10.CD2 other bump:2.43791 Ang L8.O and Y10.CD1 other bump:2.30404 Ang F3.CB and Y10.CD1 other bump:2.90628 Ang F3.CB and Y10.CG T0191 45 :PENLKYVIDGAKAL 1jr2A 40 :FLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.60722 Ang Y7.O and D10.OD1 other bump:2.46644 Ang Y7.C and D10.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDE 1jr2A 55 :DYGGLIFTSPRAVEAAELCLE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 23 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 4 total=578 Number of alignments=181 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDAQLIG 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKTEVWE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=581 Number of alignments=182 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 45 :PENLKYVIDGAKAL 1jr2A 40 :FLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.60722 Ang Y7.O and D10.OD1 other bump:2.46644 Ang Y7.C and D10.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDAQLIG 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKTEVWE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=584 Number of alignments=183 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDAQLIG 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKTEVWE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=587 Number of alignments=184 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 45 :PENLKYVIDGAKAL 1jr2A 40 :FLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.60722 Ang Y7.O and D10.OD1 other bump:2.46644 Ang Y7.C and D10.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDAQ 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKTE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=590 Number of alignments=185 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEI 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O T0191 97 :DGK 1jr2A 77 :NNK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 4 total=594 Number of alignments=186 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 46 :ENLKYVIDGAKAL 1jr2A 41 :LSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:1.60722 Ang Y6.O and D9.OD1 other bump:2.46644 Ang Y6.C and D9.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDA 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKT Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=597 Number of alignments=187 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 44 :LPENLKYVIDGAKAL 1jr2A 39 :EFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:1.60722 Ang Y8.O and D11.OD1 other bump:2.46644 Ang Y8.C and D11.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYL 1jr2A 55 :DYGGLIFTSPRAVEAAELC Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=600 Number of alignments=188 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 8 :VIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1jr2A 2 :KVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLS Fragment has 68 clashes (null) has 68 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.7398 Ang H8.CG and D36.OD2 other bump:1.44733 Ang H8.ND1 and D36.OD2 other bump:2.3249 Ang H8.ND1 and D36.CG other bump:2.13776 Ang I6.CG1 and F35.CZ other bump:3.04496 Ang I6.CA and F35.CZ other bump:1.93244 Ang I6.CB and F35.CZ other bump:1.10849 Ang I6.CG2 and F35.CZ other bump:2.54658 Ang I6.CD1 and F35.CZ other bump:2.50713 Ang I6.CG1 and F35.CE2 other bump:2.1097 Ang I6.CA and F35.CE2 other bump:1.36512 Ang I6.CB and F35.CE2 other bump:0.464115 Ang I6.CG2 and F35.CE2 other bump:2.62007 Ang I6.C and F35.CE2 other bump:2.06876 Ang I6.CG2 and F35.CE1 other bump:2.97946 Ang I6.CA and F35.CD2 other bump:2.66434 Ang I6.CB and F35.CD2 other bump:1.50779 Ang I6.CG2 and F35.CD2 other bump:2.80264 Ang I6.C and F35.CD2 other bump:2.51105 Ang I6.CG2 and F35.CD1 other bump:2.32291 Ang I6.CG2 and F35.CG other bump:2.21035 Ang P9.O and Y32.OH other bump:2.53264 Ang P9.C and Y32.OH other bump:2.6863 Ang G7.C and Y32.OH other bump:2.29785 Ang P9.N and Y32.OH other bump:2.79513 Ang P9.CA and Y32.OH other bump:2.94866 Ang P9.C and Y32.CZ other bump:2.93482 Ang P9.C and Y32.CE2 other bump:2.94282 Ang V10.N and Y32.CE2 other bump:2.89404 Ang V10.CG2 and Y32.CD2 other bump:2.49057 Ang L28.CD2 and Y30.OH other bump:2.49858 Ang F23.CE2 and Y30.OH other bump:2.51118 Ang F23.CG and Y30.OH other bump:1.6913 Ang F23.CD2 and Y30.OH other bump:2.55374 Ang I3.CD1 and Y30.OH other bump:2.2424 Ang F23.CB and Y30.CZ other bump:3.02932 Ang F23.CE2 and Y30.CZ other bump:1.97969 Ang F23.CG and Y30.CZ other bump:2.04606 Ang F23.CD2 and Y30.CZ other bump:2.61435 Ang I3.CD1 and Y30.CZ other bump:2.89253 Ang F23.CB and Y30.CE2 other bump:2.16973 Ang F23.CG and Y30.CE2 other bump:2.39837 Ang F23.CD1 and Y30.CE2 other bump:2.48912 Ang F23.CD2 and Y30.CE2 other bump:2.89378 Ang F23.CE1 and Y30.CE2 other bump:3.15031 Ang F23.CZ and Y30.CE2 other bump:2.79616 Ang I3.CD1 and Y30.CE2 other bump:2.50445 Ang L28.CB and Y30.CE1 other bump:2.9925 Ang F23.CA and Y30.CE1 other bump:1.87563 Ang F23.CB and Y30.CE1 other bump:3.23426 Ang F23.C and Y30.CE1 other bump:2.55745 Ang F23.CG and Y30.CE1 other bump:2.82791 Ang F23.CG and Y30.CD2 other bump:2.63249 Ang F23.CD1 and Y30.CD2 other bump:2.30404 Ang F23.CB and Y30.CD1 other bump:2.43791 Ang L28.O and Y30.CD1 other bump:2.90628 Ang F23.CB and Y30.CG other bump:2.98606 Ang S13.CB and M18.CG other bump:2.51437 Ang V10.CG1 and I17.CD1 other bump:2.71813 Ang V10.CG1 and I17.CG1 other bump:2.67535 Ang H12.CE1 and S15.C other bump:2.7931 Ang H12.ND1 and S15.C other bump:1.91574 Ang H12.CE1 and S15.CA other bump:2.70787 Ang H12.ND1 and S15.CA other bump:2.00028 Ang H12.CE1 and S15.N other bump:2.73039 Ang H12.ND1 and S15.N neighbor-bump: 2.42018 Ang H8.CA and P9.CD neighbor-bump: 1.87392 Ang H8.C and P9.CD neighbor-bump: 2.37803 Ang H8.CB and P9.CD T0191 46 :ENLKYVIDGAKAL 1jr2A 41 :LSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 15 residues other bump:1.60722 Ang Y6.O and D9.OD1 other bump:2.46644 Ang Y6.C and D9.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEI 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 3 total=603 Number of alignments=189 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-local-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-local-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDAQLIG 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKTEVWE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 1 total=604 Number of alignments=190 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-local-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-local-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 41 :FDVLPENLKYVIDGAKAL 1jr2A 36 :LSFEFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:1.60722 Ang Y11.O and D14.OD1 other bump:2.46644 Ang Y11.C and D14.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDK 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNN Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 2 total=606 Number of alignments=191 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-simpleSW-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-simpleSW-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 28 :AFKDKGL 1jr2A 154 :ALKDKGI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues Number of specific fragments= 1 total=607 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-simpleSW-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-simpleSW-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set Number of specific fragments= 0 total=607 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-vit-adpstyle1.pw.a2m.gz # 1jr2A read from T0191-1jr2A-vit-adpstyle1.pw.a2m.gz # found chain 1jr2A in template set T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDKDAQLIG 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNNKTEVWE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 1 total=608 Number of alignments=192 # Reading fragments from alignment file # T0191 read from T0191-1jr2A-vit-adpstyle5.pw.a2m.gz # 1jr2A read from T0191-1jr2A-vit-adpstyle5.pw.a2m.gz # found chain 1jr2A in template set T0191 41 :FDVLPENLKYVIDGAKAL 1jr2A 36 :LSFEFLSLPSFSEKLSHP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:1.60722 Ang Y11.O and D14.OD1 other bump:2.46644 Ang Y11.C and D14.OD1 T0191 59 :GIVGFNVTIPHKIEIMKYLDEIDK 1jr2A 55 :DYGGLIFTSPRAVEAAELCLEQNN Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.58434 Ang E15.O and Y19.CD1 other bump:3.02639 Ang V8.CG1 and I14.CG1 neighbor-bump: 3.02064 Ang I10.CG1 and P11.CD other bump:2.6613 Ang I3.CG2 and G5.O Number of specific fragments= 2 total=610 Number of alignments=193 # command:# Prefix for input files set to 1j97A/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1j97A-T0191-local-adpstyle1.pw.a2m.gz # 1j97A read from 1j97A-T0191-local-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGF 1j97A 174 :MFKKAGLKIAFCAKPILKEKADICIEKRDLREILKY Fragment has 32 clashes (null) has 32 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.39898 Ang Y10.OH and F37.CB other bump:2.92406 Ang Y10.CE2 and F37.CB other bump:2.31833 Ang Y12.OH and K30.C other bump:2.51272 Ang Y12.OH and K30.CA other bump:3.16119 Ang Y12.CZ and K30.N other bump:1.8154 Ang Y12.OH and K30.N other bump:2.62609 Ang Y12.OH and A29.C other bump:2.18518 Ang F3.CZ and L22.CD2 other bump:2.95379 Ang Y10.C and L22.CD2 other bump:2.42634 Ang V11.N and L22.CD2 other bump:2.80607 Ang V11.CA and L22.CD2 other bump:2.37262 Ang F3.CE2 and L22.CD2 other bump:2.62589 Ang V11.CB and L22.CD2 other bump:1.60925 Ang V11.CG2 and L22.CD2 other bump:2.99321 Ang V11.N and L22.CD1 other bump:2.61151 Ang V11.CA and L22.CD1 other bump:1.40061 Ang V11.CB and L22.CD1 other bump:2.52075 Ang V11.CG1 and L22.CD1 other bump:1.54046 Ang V11.CG2 and L22.CD1 other bump:2.38048 Ang V11.CB and L22.CG other bump:1.30663 Ang V11.CG2 and L22.CG other bump:2.82163 Ang V11.CG2 and L22.CB other bump:1.97936 Ang V11.CG1 and A14.CB other bump:3.08257 Ang F3.CZ and V11.CG2 other bump:3.09607 Ang F3.CE2 and V11.CG2 other bump:2.23901 Ang L8.CD2 and Y10.OH other bump:2.94903 Ang L8.CD1 and Y10.OH other bump:2.79548 Ang L8.CG and Y10.CZ other bump:2.40418 Ang L8.CD2 and Y10.CZ other bump:1.95909 Ang L8.CG and Y10.CE1 other bump:1.98214 Ang L8.CD2 and Y10.CE1 other bump:2.82354 Ang L8.CD1 and Y10.CE1 Number of specific fragments= 1 total=611 Number of alignments=194 # Reading fragments from alignment file # T0191 read from 1j97A-T0191-local-adpstyle5.pw.a2m.gz # 1j97A read from 1j97A-T0191-local-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI 1j97A 61 :KDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL Fragment has 29 clashes (null) has 29 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 55 residues other bump:2.76823 Ang Y50.CE1 and I54.CD1 other bump:2.05686 Ang Y50.CZ and I54.CD1 other bump:2.67869 Ang Y50.CG and I54.CD1 other bump:1.90423 Ang Y50.CD2 and I54.CD1 other bump:1.4964 Ang Y50.CE2 and I54.CD1 other bump:3.00223 Ang Y50.CE2 and I54.CG1 other bump:2.85211 Ang L18.CD2 and Y50.CE2 other bump:2.82169 Ang K44.CG and M48.SD other bump:2.49475 Ang T40.CB and P42.CD other bump:2.82886 Ang T40.CG2 and P42.CD self-bump: 1.36598 Ang P42.N and P42.CD neighbor-bump: 2.43281 Ang I41.CA and P42.CD other bump:2.59356 Ang T40.CA and P42.CD other bump:1.97193 Ang T40.OG1 and P42.CD other bump:1.91327 Ang T40.C and P42.CD neighbor-bump: 1.81917 Ang I41.N and P42.CD other bump:2.10094 Ang T40.CB and P42.CG other bump:1.74404 Ang T40.CG2 and P42.CG self-bump: 2.21251 Ang P42.N and P42.CG other bump:2.90704 Ang T40.CA and P42.CG other bump:1.84849 Ang T40.OG1 and P42.CG other bump:2.77337 Ang T40.C and P42.CG other bump:2.51088 Ang T40.OG1 and P42.CB other bump:3.18314 Ang V35.CG1 and F37.CZ other bump:2.99228 Ang V35.CG1 and F37.CE2 other bump:2.03011 Ang P19.CD and L22.CD1 other bump:2.68417 Ang P19.N and L22.CD1 other bump:3.02798 Ang P19.CD and L22.CG other bump:3.20443 Ang V11.CG1 and F15.CZ Number of specific fragments= 1 total=612 Number of alignments=195 # Reading fragments from alignment file # T0191 read from 1j97A-T0191-vit-adpstyle1.pw.a2m.gz # 1j97A read from 1j97A-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGF 1j97A 174 :MFKKAGLKIAFCAKPILKEKADICIEKRDLREILKY Fragment has 32 clashes (null) has 32 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 38 residues other bump:2.39898 Ang Y10.OH and F37.CB other bump:2.92406 Ang Y10.CE2 and F37.CB other bump:2.31833 Ang Y12.OH and K30.C other bump:2.51272 Ang Y12.OH and K30.CA other bump:3.16119 Ang Y12.CZ and K30.N other bump:1.8154 Ang Y12.OH and K30.N other bump:2.62609 Ang Y12.OH and A29.C other bump:2.18518 Ang F3.CZ and L22.CD2 other bump:2.95379 Ang Y10.C and L22.CD2 other bump:2.42634 Ang V11.N and L22.CD2 other bump:2.80607 Ang V11.CA and L22.CD2 other bump:2.37262 Ang F3.CE2 and L22.CD2 other bump:2.62589 Ang V11.CB and L22.CD2 other bump:1.60925 Ang V11.CG2 and L22.CD2 other bump:2.99321 Ang V11.N and L22.CD1 other bump:2.61151 Ang V11.CA and L22.CD1 other bump:1.40061 Ang V11.CB and L22.CD1 other bump:2.52075 Ang V11.CG1 and L22.CD1 other bump:1.54046 Ang V11.CG2 and L22.CD1 other bump:2.38048 Ang V11.CB and L22.CG other bump:1.30663 Ang V11.CG2 and L22.CG other bump:2.82163 Ang V11.CG2 and L22.CB other bump:1.97936 Ang V11.CG1 and A14.CB other bump:3.08257 Ang F3.CZ and V11.CG2 other bump:3.09607 Ang F3.CE2 and V11.CG2 other bump:2.23901 Ang L8.CD2 and Y10.OH other bump:2.94903 Ang L8.CD1 and Y10.OH other bump:2.79548 Ang L8.CG and Y10.CZ other bump:2.40418 Ang L8.CD2 and Y10.CZ other bump:1.95909 Ang L8.CG and Y10.CE1 other bump:1.98214 Ang L8.CD2 and Y10.CE1 other bump:2.82354 Ang L8.CD1 and Y10.CE1 Number of specific fragments= 1 total=613 Number of alignments=196 # Reading fragments from alignment file # T0191 read from 1j97A-T0191-vit-adpstyle5.pw.a2m.gz # 1j97A read from 1j97A-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 28 :AFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI 1j97A 61 :KDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL Fragment has 29 clashes (null) has 29 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 55 residues other bump:2.76823 Ang Y50.CE1 and I54.CD1 other bump:2.05686 Ang Y50.CZ and I54.CD1 other bump:2.67869 Ang Y50.CG and I54.CD1 other bump:1.90423 Ang Y50.CD2 and I54.CD1 other bump:1.4964 Ang Y50.CE2 and I54.CD1 other bump:3.00223 Ang Y50.CE2 and I54.CG1 other bump:2.85211 Ang L18.CD2 and Y50.CE2 other bump:2.82169 Ang K44.CG and M48.SD other bump:2.49475 Ang T40.CB and P42.CD other bump:2.82886 Ang T40.CG2 and P42.CD self-bump: 1.36598 Ang P42.N and P42.CD neighbor-bump: 2.43281 Ang I41.CA and P42.CD other bump:2.59356 Ang T40.CA and P42.CD other bump:1.97193 Ang T40.OG1 and P42.CD other bump:1.91327 Ang T40.C and P42.CD neighbor-bump: 1.81917 Ang I41.N and P42.CD other bump:2.10094 Ang T40.CB and P42.CG other bump:1.74404 Ang T40.CG2 and P42.CG self-bump: 2.21251 Ang P42.N and P42.CG other bump:2.90704 Ang T40.CA and P42.CG other bump:1.84849 Ang T40.OG1 and P42.CG other bump:2.77337 Ang T40.C and P42.CG other bump:2.51088 Ang T40.OG1 and P42.CB other bump:3.18314 Ang V35.CG1 and F37.CZ other bump:2.99228 Ang V35.CG1 and F37.CE2 other bump:2.03011 Ang P19.CD and L22.CD1 other bump:2.68417 Ang P19.N and L22.CD1 other bump:3.02798 Ang P19.CD and L22.CG other bump:3.20443 Ang V11.CG1 and F15.CZ Number of specific fragments= 1 total=614 Number of alignments=197 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 5 :KTKVIGL 1j97A 3 :KKKKLIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 15 :PVEHSFSPIMHNAAFKDK 1j97A 13 :DSTLVNNETIDEIAREAG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.71378 Ang A15.CA and D18.OD2 other bump:2.49746 Ang A15.C and D18.OD2 other bump:1.78255 Ang A15.O and D18.OD2 other bump:2.57819 Ang P9.CB and H12.CD2 other bump:3.01795 Ang P9.CG and H12.CD2 other bump:2.88711 Ang V3.CG2 and P9.CD T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 4 total=618 Number of alignments=198 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 3 :NAKTKVI 1j97A 3 :KKKKLIL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues other bump:2.75846 Ang K6.CE and I8.CD1 T0191 18 :HS 1j97A 16 :LV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 21 :SPIMHNAAFKDKGL 1j97A 18 :NNETIDEIAREAGV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.94254 Ang F10.CD1 and K13.NZ neighbor-bump: 2.2824 Ang S2.N and P3.CD T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 5 total=623 Number of alignments=199 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=625 Number of alignments=200 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGYN 1j97A 120 :ANRLIVKDGKLTGDV Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues neighbor-bump: 3.2798 Ang Y15.CE2 and N16.C other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=627 Number of alignments=201 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 5 :KTKVIGL 1j97A 3 :KKKKLIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 15 :PVEHSFSPIMHNAAFKD 1j97A 13 :DSTLVNNETIDEIAREA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.57819 Ang P9.CB and H12.CD2 other bump:3.01795 Ang P9.CG and H12.CD2 other bump:2.88711 Ang V3.CG2 and P9.CD T0191 42 :DV 1j97A 30 :GV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 5 total=632 Number of alignments=202 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 3 :NAKTKVI 1j97A 3 :KKKKLIL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues other bump:2.75846 Ang K6.CE and I8.CD1 T0191 18 :HSFSPIMHNAAFKDKGL 1j97A 15 :TLVNNETIDEIAREAGV Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:2.94254 Ang F13.CD1 and K16.NZ other bump:2.8753 Ang F4.CE2 and P6.C other bump:2.5841 Ang F4.CD2 and P6.O other bump:2.01158 Ang F4.CE2 and P6.O other bump:2.84693 Ang F4.CD2 and P6.CD neighbor-bump: 2.28239 Ang S5.N and P6.CD other bump:2.49612 Ang F4.CD2 and P6.CG T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 88 :GAVNTIKIEDGK 1j97A 118 :AFANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues other bump:2.10138 Ang K8.CE and E10.OE1 T0191 107 :GI 1j97A 209 :YI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 5 total=637 Number of alignments=203 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=639 Number of alignments=204 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 88 :GAVNTIKIEDGKAIGY 1j97A 118 :AFANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:1.77583 Ang K8.CD and I15.CD1 other bump:2.06494 Ang K8.CE and I15.CD1 other bump:2.32348 Ang K8.NZ and I15.CD1 other bump:2.66312 Ang K8.CD and I15.CG1 other bump:2.10138 Ang K8.CE and E10.OE1 Number of specific fragments= 2 total=641 Number of alignments=205 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 5 :KTKVIGL 1j97A 3 :KKKKLIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 15 :PVEHSFSPIMHNAAFKDK 1j97A 13 :DSTLVNNETIDEIAREAG Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.71378 Ang A15.CA and D18.OD2 other bump:2.49746 Ang A15.C and D18.OD2 other bump:1.78255 Ang A15.O and D18.OD2 other bump:2.57819 Ang P9.CB and H12.CD2 other bump:3.01795 Ang P9.CG and H12.CD2 other bump:2.88711 Ang V3.CG2 and P9.CD T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 4 total=645 Number of alignments=206 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 5 :KTKVIGL 1j97A 3 :KKKKLIL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 15 :PVEHSFSPIMHNAAF 1j97A 13 :DSTLVNNETIDEIAR Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:2.57819 Ang P9.CB and H12.CD2 other bump:3.01795 Ang P9.CG and H12.CD2 other bump:2.88711 Ang V3.CG2 and P9.CD T0191 31 :DKGL 1j97A 28 :EAGV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:1.99028 Ang K14.NZ and D39.OD2 other bump:2.54466 Ang K14.NZ and D39.CG other bump:2.46613 Ang K14.NZ and D39.CB other bump:2.67869 Ang Y34.CG and I38.CD1 other bump:1.90423 Ang Y34.CD2 and I38.CD1 other bump:2.76823 Ang Y34.CE1 and I38.CD1 other bump:1.49639 Ang Y34.CE2 and I38.CD1 other bump:2.05685 Ang Y34.CZ and I38.CD1 other bump:3.00223 Ang Y34.CE2 and I38.CG1 other bump:2.56596 Ang L2.CD2 and Y34.CE2 other bump:2.82169 Ang K28.CG and M32.SD self-bump: 1.36598 Ang P26.N and P26.CD other bump:2.82886 Ang T24.CG2 and P26.CD other bump:1.91327 Ang T24.C and P26.CD neighbor-bump: 1.81917 Ang I25.N and P26.CD neighbor-bump: 2.43281 Ang I25.CA and P26.CD other bump:2.59356 Ang T24.CA and P26.CD other bump:2.49475 Ang T24.CB and P26.CD other bump:1.97193 Ang T24.OG1 and P26.CD self-bump: 2.21251 Ang P26.N and P26.CG other bump:1.74404 Ang T24.CG2 and P26.CG other bump:2.77337 Ang T24.C and P26.CG other bump:2.90704 Ang T24.CA and P26.CG other bump:2.10094 Ang T24.CB and P26.CG other bump:1.84849 Ang T24.OG1 and P26.CG other bump:2.51088 Ang T24.OG1 and P26.CB other bump:3.18314 Ang V19.CG1 and F21.CZ other bump:2.99228 Ang V19.CG1 and F21.CE2 other bump:2.68417 Ang P3.N and L6.CD1 other bump:2.0301 Ang P3.CD and L6.CD1 other bump:3.02798 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1j97A 120 :ANRLIVKDGK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 5 total=650 Number of alignments=207 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=652 Number of alignments=208 # Reading fragments from alignment file # T0191 read from T0191-1j97A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1j97A 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 31 clashes (null) has 31 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:1.99028 Ang K15.NZ and D40.OD2 other bump:2.54466 Ang K15.NZ and D40.CG other bump:2.46613 Ang K15.NZ and D40.CB other bump:2.67869 Ang Y35.CG and I39.CD1 other bump:1.90423 Ang Y35.CD2 and I39.CD1 other bump:2.76823 Ang Y35.CE1 and I39.CD1 other bump:1.49639 Ang Y35.CE2 and I39.CD1 other bump:2.05685 Ang Y35.CZ and I39.CD1 other bump:3.00223 Ang Y35.CE2 and I39.CG1 other bump:2.85211 Ang L3.CD2 and Y35.CE2 other bump:2.82169 Ang K29.CG and M33.SD self-bump: 1.36598 Ang P27.N and P27.CD other bump:2.82886 Ang T25.CG2 and P27.CD other bump:1.91327 Ang T25.C and P27.CD neighbor-bump: 1.81917 Ang I26.N and P27.CD neighbor-bump: 2.43281 Ang I26.CA and P27.CD other bump:2.59356 Ang T25.CA and P27.CD other bump:2.49475 Ang T25.CB and P27.CD other bump:1.97193 Ang T25.OG1 and P27.CD self-bump: 2.21251 Ang P27.N and P27.CG other bump:1.74404 Ang T25.CG2 and P27.CG other bump:2.77337 Ang T25.C and P27.CG other bump:2.90704 Ang T25.CA and P27.CG other bump:2.10094 Ang T25.CB and P27.CG other bump:1.84849 Ang T25.OG1 and P27.CG other bump:2.51088 Ang T25.OG1 and P27.CB other bump:3.18314 Ang V20.CG1 and F22.CZ other bump:2.99228 Ang V20.CG1 and F22.CE2 other bump:2.68417 Ang P4.N and L7.CD1 other bump:2.0301 Ang P4.CD and L7.CD1 other bump:3.02798 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=654 Number of alignments=209 # Reading fragments from alignment file # T0191 read from T0191-1j97A-local-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-local-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 1 total=655 # Reading fragments from alignment file # T0191 read from T0191-1j97A-local-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-local-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 64 :NVTIPHKIEIMKYLDEID 1j97A 97 :VVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.67869 Ang Y14.CG and I18.CD1 other bump:1.90423 Ang Y14.CD2 and I18.CD1 other bump:2.76823 Ang Y14.CE1 and I18.CD1 other bump:1.49639 Ang Y14.CE2 and I18.CD1 other bump:2.05685 Ang Y14.CZ and I18.CD1 other bump:3.00223 Ang Y14.CE2 and I18.CG1 other bump:2.82169 Ang K8.CG and M12.SD other bump:2.82886 Ang T4.CG2 and P6.CD other bump:1.91327 Ang T4.C and P6.CD neighbor-bump: 1.81917 Ang I5.N and P6.CD neighbor-bump: 2.43281 Ang I5.CA and P6.CD self-bump: 1.36598 Ang P6.N and P6.CD other bump:2.59356 Ang T4.CA and P6.CD other bump:2.49475 Ang T4.CB and P6.CD other bump:1.97193 Ang T4.OG1 and P6.CD other bump:1.74404 Ang T4.CG2 and P6.CG other bump:2.77337 Ang T4.C and P6.CG self-bump: 2.21251 Ang P6.N and P6.CG other bump:2.90704 Ang T4.CA and P6.CG other bump:2.10094 Ang T4.CB and P6.CG other bump:1.84849 Ang T4.OG1 and P6.CG other bump:2.51088 Ang T4.OG1 and P6.CB T0191 85 :QLIGAVNTIKIEDGKAIGY 1j97A 115 :LDYAFANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.77583 Ang K11.CD and I18.CD1 other bump:2.06494 Ang K11.CE and I18.CD1 other bump:2.32348 Ang K11.NZ and I18.CD1 other bump:2.66312 Ang K11.CD and I18.CG1 other bump:2.10138 Ang K11.CE and E13.OE1 Number of specific fragments= 2 total=657 Number of alignments=210 # Reading fragments from alignment file # T0191 read from T0191-1j97A-simpleSW-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-simpleSW-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 29 :FKDKGLNYVYVAFDVLPENLKYVID 1j97A 175 :FKKAGLKIAFCAKPILKEKADICIE Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.37262 Ang F2.CE2 and L21.CD2 other bump:2.18518 Ang F2.CZ and L21.CD2 other bump:2.95379 Ang Y9.C and L21.CD2 other bump:2.42634 Ang V10.N and L21.CD2 other bump:2.80607 Ang V10.CA and L21.CD2 other bump:2.62589 Ang V10.CB and L21.CD2 other bump:1.60925 Ang V10.CG2 and L21.CD2 other bump:2.99321 Ang V10.N and L21.CD1 other bump:2.61151 Ang V10.CA and L21.CD1 other bump:1.40061 Ang V10.CB and L21.CD1 other bump:2.52075 Ang V10.CG1 and L21.CD1 other bump:1.54046 Ang V10.CG2 and L21.CD1 other bump:2.38048 Ang V10.CB and L21.CG other bump:1.30663 Ang V10.CG2 and L21.CG other bump:2.82163 Ang V10.CG2 and L21.CB other bump:1.97936 Ang V10.CG1 and A13.CB other bump:3.09607 Ang F2.CE2 and V10.CG2 other bump:3.08257 Ang F2.CZ and V10.CG2 other bump:2.23901 Ang L7.CD2 and Y9.OH other bump:2.94903 Ang L7.CD1 and Y9.OH other bump:2.79548 Ang L7.CG and Y9.CZ other bump:2.40418 Ang L7.CD2 and Y9.CZ other bump:1.95909 Ang L7.CG and Y9.CE1 other bump:1.98214 Ang L7.CD2 and Y9.CE1 other bump:2.82354 Ang L7.CD1 and Y9.CE1 Number of specific fragments= 1 total=658 Number of alignments=211 # Reading fragments from alignment file # T0191 read from T0191-1j97A-simpleSW-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-simpleSW-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 27 :AAFKDKGLNYVYVAFDVLPENL 1j97A 173 :SMFKKAGLKIAFCAKPILKEKA Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.37261 Ang F4.CE2 and L23.CD2 other bump:2.18517 Ang F4.CZ and L23.CD2 other bump:2.95378 Ang Y11.C and L23.CD2 other bump:2.42634 Ang V12.N and L23.CD2 other bump:2.80608 Ang V12.CA and L23.CD2 other bump:2.6259 Ang V12.CB and L23.CD2 other bump:1.60926 Ang V12.CG2 and L23.CD2 other bump:2.99321 Ang V12.N and L23.CD1 other bump:2.61151 Ang V12.CA and L23.CD1 other bump:1.40061 Ang V12.CB and L23.CD1 other bump:2.52076 Ang V12.CG1 and L23.CD1 other bump:1.54046 Ang V12.CG2 and L23.CD1 other bump:2.38048 Ang V12.CB and L23.CG other bump:1.30663 Ang V12.CG2 and L23.CG other bump:2.82162 Ang V12.CG2 and L23.CB other bump:1.97936 Ang V12.CG1 and A15.CB other bump:3.09607 Ang F4.CE2 and V12.CG2 other bump:3.08257 Ang F4.CZ and V12.CG2 other bump:2.23901 Ang L9.CD2 and Y11.OH other bump:2.94903 Ang L9.CD1 and Y11.OH other bump:2.79548 Ang L9.CG and Y11.CZ other bump:2.40418 Ang L9.CD2 and Y11.CZ other bump:1.95909 Ang L9.CG and Y11.CE1 other bump:1.98214 Ang L9.CD2 and Y11.CE1 other bump:2.82354 Ang L9.CD1 and Y11.CE1 Number of specific fragments= 1 total=659 Number of alignments=212 # Reading fragments from alignment file # T0191 read from T0191-1j97A-vit-adpstyle1.pw.a2m.gz # 1j97A read from T0191-1j97A-vit-adpstyle1.pw.a2m.gz # found chain 1j97A in training set T0191 90 :VNTIKIEDGKAIGY 1j97A 120 :ANRLIVKDGKLTGD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.77583 Ang K6.CD and I13.CD1 other bump:2.06494 Ang K6.CE and I13.CD1 other bump:2.32348 Ang K6.NZ and I13.CD1 other bump:2.66312 Ang K6.CD and I13.CG1 other bump:2.10138 Ang K6.CE and E8.OE1 neighbor-bump: 2.46031 Ang V2.CG1 and N3.O Number of specific fragments= 1 total=660 # Reading fragments from alignment file # T0191 read from T0191-1j97A-vit-adpstyle5.pw.a2m.gz # 1j97A read from T0191-1j97A-vit-adpstyle5.pw.a2m.gz # found chain 1j97A in training set T0191 64 :NVTIPHKIEIMKYLDEID 1j97A 97 :VVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.67869 Ang Y14.CG and I18.CD1 other bump:1.90423 Ang Y14.CD2 and I18.CD1 other bump:2.76823 Ang Y14.CE1 and I18.CD1 other bump:1.49639 Ang Y14.CE2 and I18.CD1 other bump:2.05685 Ang Y14.CZ and I18.CD1 other bump:3.00223 Ang Y14.CE2 and I18.CG1 other bump:2.82169 Ang K8.CG and M12.SD other bump:2.82886 Ang T4.CG2 and P6.CD other bump:1.91327 Ang T4.C and P6.CD neighbor-bump: 1.81917 Ang I5.N and P6.CD neighbor-bump: 2.43281 Ang I5.CA and P6.CD self-bump: 1.36598 Ang P6.N and P6.CD other bump:2.59356 Ang T4.CA and P6.CD other bump:2.49475 Ang T4.CB and P6.CD other bump:1.97193 Ang T4.OG1 and P6.CD other bump:1.74404 Ang T4.CG2 and P6.CG other bump:2.77337 Ang T4.C and P6.CG self-bump: 2.21251 Ang P6.N and P6.CG other bump:2.90704 Ang T4.CA and P6.CG other bump:2.10094 Ang T4.CB and P6.CG other bump:1.84849 Ang T4.OG1 and P6.CG other bump:2.51088 Ang T4.OG1 and P6.CB T0191 85 :QLIGAVNTIKIEDGKAIGY 1j97A 115 :LDYAFANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.77583 Ang K11.CD and I18.CD1 other bump:2.06494 Ang K11.CE and I18.CD1 other bump:2.32348 Ang K11.NZ and I18.CD1 other bump:2.66312 Ang K11.CD and I18.CG1 other bump:2.10138 Ang K11.CE and E13.OE1 Number of specific fragments= 2 total=662 Number of alignments=213 # command:# Prefix for input files set to 1f5sA/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1f5sA-T0191-fssp-global-adpstyle1.pw.a2m.gz # 1f5sA read from 1f5sA-T0191-fssp-global-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 2 :INAKTKVIGLIGHPVEHSFS 1f5sA 3 :KKKKLILFDFDSTLVNNETI Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.44457 Ang L11.CD2 and F20.CE2 other bump:2.77689 Ang I12.CD1 and F20.CE2 other bump:2.55976 Ang I12.CD1 and F20.CD2 other bump:2.42058 Ang I12.CG2 and H18.C other bump:2.6846 Ang I12.CG1 and H18.O other bump:2.37083 Ang I12.CB and H18.O other bump:1.33244 Ang I12.CG2 and H18.O other bump:2.74891 Ang I12.CD1 and H18.O other bump:2.31679 Ang I12.CG1 and V16.CG2 other bump:3.16361 Ang G10.C and P15.CD other bump:3.24322 Ang L11.CA and P15.CD other bump:2.42676 Ang L11.O and P15.CD other bump:3.11868 Ang L11.C and P15.CD other bump:2.13836 Ang G10.O and P15.CD neighbor-bump: 2.69019 Ang H14.CB and P15.CD self-bump: 1.37118 Ang P15.N and P15.CD other bump:3.26258 Ang G10.C and P15.CG other bump:2.19387 Ang G10.O and P15.CG other bump:2.58363 Ang I9.CG2 and P15.CG other bump:2.88213 Ang I9.CG2 and H14.CD2 neighbor-bump: 3.07914 Ang I12.CG2 and G13.CA neighbor-bump: 1.9682 Ang I12.CG2 and G13.N self-bump: 2.4012 Ang I12.CG2 and I12.C self-bump: 1.37207 Ang I12.CA and I12.CB neighbor-bump: 2.52688 Ang I9.CG2 and G10.O T0191 22 :PIMH 1f5sA 58 :SLLK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 27 :AAFKDKGLNYVYVA 1f5sA 86 :KELKNRGYVVAVVS Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.60279 Ang Y13.CE1 and A15.CB other bump:2.32054 Ang F4.C and Y11.OH other bump:2.63509 Ang F4.N and Y11.OH other bump:1.42443 Ang F4.CA and Y11.OH other bump:0.552704 Ang F4.CB and Y11.OH other bump:1.62158 Ang F4.CG and Y11.OH other bump:2.32392 Ang F4.CD2 and Y11.OH other bump:2.83564 Ang F4.CD1 and Y11.OH other bump:2.85647 Ang F4.C and Y11.CZ other bump:2.52047 Ang F4.CA and Y11.CZ other bump:1.26427 Ang F4.CB and Y11.CZ other bump:2.32408 Ang F4.CG and Y11.CZ other bump:2.07457 Ang F4.CB and Y11.CE2 other bump:2.37057 Ang F4.CG and Y11.CE2 other bump:2.57087 Ang F4.CD1 and Y11.CE2 other bump:2.73723 Ang F4.C and Y11.CE1 other bump:2.85816 Ang K5.N and Y11.CE1 other bump:2.41484 Ang F4.CB and Y11.CE1 T0191 41 :FDVLPEN 1f5sA 115 :LDYAFAN Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues neighbor-bump: 1.98281 Ang L5.C and P6.CD neighbor-bump: 2.85429 Ang L5.C and P6.CG T0191 49 :KYVIDGAKALGIVGFNVTIP 1f5sA 122 :RLIVKDGKLTGDVEGEVLKE Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.11319 Ang K2.O and F16.CZ other bump:2.63966 Ang K2.CB and F16.CZ other bump:1.40696 Ang K2.CA and F16.CZ other bump:1.88187 Ang K2.C and F16.CZ other bump:1.9159 Ang G1.C and F16.CZ other bump:0.741899 Ang K2.N and F16.CZ other bump:2.39423 Ang K2.CB and F16.CE2 other bump:1.76483 Ang K2.CA and F16.CE2 other bump:2.97133 Ang K2.C and F16.CE2 other bump:1.88065 Ang G1.O and F16.CE2 other bump:0.963921 Ang G1.C and F16.CE2 other bump:0.654445 Ang K2.N and F16.CE2 other bump:2.07899 Ang K2.O and F16.CE1 other bump:2.71532 Ang K2.CA and F16.CE1 other bump:2.59091 Ang K2.C and F16.CE1 neighbor-bump: 2.25425 Ang G15.O and F16.CE1 other bump:2.53126 Ang V14.CG2 and F16.CE1 other bump:2.85053 Ang G1.C and F16.CE1 other bump:1.88002 Ang K2.N and F16.CE1 other bump:3.10542 Ang K2.CA and F16.CD2 neighbor-bump: 2.45852 Ang G15.O and F16.CD2 other bump:1.61982 Ang G1.C and F16.CD2 other bump:1.81363 Ang K2.N and F16.CD2 neighbor-bump: 1.47168 Ang G15.O and F16.CD1 neighbor-bump: 2.31338 Ang G15.C and F16.CD1 neighbor-bump: 2.89463 Ang G15.N and F16.CD1 other bump:2.52643 Ang K2.N and F16.CD1 neighbor-bump: 1.64695 Ang G15.O and F16.CG neighbor-bump: 2.53327 Ang G15.C and F16.CG other bump:2.66598 Ang G1.C and F16.CG other bump:2.51764 Ang K2.N and F16.CG other bump:2.92498 Ang V4.CB and I13.CD1 other bump:2.76964 Ang V4.CG1 and I13.CD1 other bump:2.68461 Ang V4.CB and I13.CG1 other bump:2.72567 Ang V4.CG1 and I13.CG1 other bump:2.71864 Ang D6.CB and L11.CD2 neighbor-bump: 2.41092 Ang G7.C and A8.CB neighbor-bump: 2.16745 Ang G7.O and A8.CB T0191 69 :HKIEIMKYLD 1f5sA 143 :AKGEILEKIA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues other bump:2.56518 Ang H2.NE2 and I6.CD1 T0191 79 :EIDKDAQLIGAV 1f5sA 199 :EKRDLREILKYI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues Number of specific fragments= 7 total=669 Number of alignments=214 # Reading fragments from alignment file # T0191 read from 1f5sA-T0191-fssp-global-adpstyle5.pw.a2m.gz # 1f5sA read from 1f5sA-T0191-fssp-global-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 2 :INAKTKVIGLIGHPVEHSFS 1f5sA 3 :KKKKLILFDFDSTLVNNETI Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.44457 Ang L11.CD2 and F20.CE2 other bump:2.77689 Ang I12.CD1 and F20.CE2 other bump:2.55976 Ang I12.CD1 and F20.CD2 other bump:2.42058 Ang I12.CG2 and H18.C other bump:2.6846 Ang I12.CG1 and H18.O other bump:2.37083 Ang I12.CB and H18.O other bump:1.33244 Ang I12.CG2 and H18.O other bump:2.74891 Ang I12.CD1 and H18.O other bump:2.31679 Ang I12.CG1 and V16.CG2 other bump:3.16361 Ang G10.C and P15.CD other bump:3.24322 Ang L11.CA and P15.CD other bump:2.42676 Ang L11.O and P15.CD other bump:3.11868 Ang L11.C and P15.CD other bump:2.13836 Ang G10.O and P15.CD neighbor-bump: 2.69019 Ang H14.CB and P15.CD self-bump: 1.37118 Ang P15.N and P15.CD other bump:3.26258 Ang G10.C and P15.CG other bump:2.19387 Ang G10.O and P15.CG other bump:2.58363 Ang I9.CG2 and P15.CG other bump:2.88213 Ang I9.CG2 and H14.CD2 neighbor-bump: 3.07914 Ang I12.CG2 and G13.CA neighbor-bump: 1.9682 Ang I12.CG2 and G13.N self-bump: 2.4012 Ang I12.CG2 and I12.C self-bump: 1.37207 Ang I12.CA and I12.CB neighbor-bump: 2.52688 Ang I9.CG2 and G10.O T0191 22 :PIMH 1f5sA 58 :SLLK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 27 :AAFKDKGLNYVYVA 1f5sA 86 :KELKNRGYVVAVVS Fragment has 18 clashes (null) has 18 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:2.60279 Ang Y13.CE1 and A15.CB other bump:2.32054 Ang F4.C and Y11.OH other bump:2.63509 Ang F4.N and Y11.OH other bump:1.42443 Ang F4.CA and Y11.OH other bump:0.552704 Ang F4.CB and Y11.OH other bump:1.62158 Ang F4.CG and Y11.OH other bump:2.32392 Ang F4.CD2 and Y11.OH other bump:2.83564 Ang F4.CD1 and Y11.OH other bump:2.85647 Ang F4.C and Y11.CZ other bump:2.52047 Ang F4.CA and Y11.CZ other bump:1.26427 Ang F4.CB and Y11.CZ other bump:2.32408 Ang F4.CG and Y11.CZ other bump:2.07457 Ang F4.CB and Y11.CE2 other bump:2.37057 Ang F4.CG and Y11.CE2 other bump:2.57087 Ang F4.CD1 and Y11.CE2 other bump:2.73723 Ang F4.C and Y11.CE1 other bump:2.85816 Ang K5.N and Y11.CE1 other bump:2.41484 Ang F4.CB and Y11.CE1 T0191 41 :FDVLPEN 1f5sA 115 :LDYAFAN Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues neighbor-bump: 1.98281 Ang L5.C and P6.CD neighbor-bump: 2.85429 Ang L5.C and P6.CG T0191 49 :KYVIDGAKALGIVGFNVTIP 1f5sA 122 :RLIVKDGKLTGDVEGEVLKE Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.11319 Ang K2.O and F16.CZ other bump:2.63966 Ang K2.CB and F16.CZ other bump:1.40696 Ang K2.CA and F16.CZ other bump:1.88187 Ang K2.C and F16.CZ other bump:1.9159 Ang G1.C and F16.CZ other bump:0.741899 Ang K2.N and F16.CZ other bump:2.39423 Ang K2.CB and F16.CE2 other bump:1.76483 Ang K2.CA and F16.CE2 other bump:2.97133 Ang K2.C and F16.CE2 other bump:1.88065 Ang G1.O and F16.CE2 other bump:0.963921 Ang G1.C and F16.CE2 other bump:0.654445 Ang K2.N and F16.CE2 other bump:2.07899 Ang K2.O and F16.CE1 other bump:2.71532 Ang K2.CA and F16.CE1 other bump:2.59091 Ang K2.C and F16.CE1 neighbor-bump: 2.25425 Ang G15.O and F16.CE1 other bump:2.53126 Ang V14.CG2 and F16.CE1 other bump:2.85053 Ang G1.C and F16.CE1 other bump:1.88002 Ang K2.N and F16.CE1 other bump:3.10542 Ang K2.CA and F16.CD2 neighbor-bump: 2.45852 Ang G15.O and F16.CD2 other bump:1.61982 Ang G1.C and F16.CD2 other bump:1.81363 Ang K2.N and F16.CD2 neighbor-bump: 1.47168 Ang G15.O and F16.CD1 neighbor-bump: 2.31338 Ang G15.C and F16.CD1 neighbor-bump: 2.89463 Ang G15.N and F16.CD1 other bump:2.52643 Ang K2.N and F16.CD1 neighbor-bump: 1.64695 Ang G15.O and F16.CG neighbor-bump: 2.53327 Ang G15.C and F16.CG other bump:2.66598 Ang G1.C and F16.CG other bump:2.51764 Ang K2.N and F16.CG other bump:2.92498 Ang V4.CB and I13.CD1 other bump:2.76964 Ang V4.CG1 and I13.CD1 other bump:2.68461 Ang V4.CB and I13.CG1 other bump:2.72567 Ang V4.CG1 and I13.CG1 other bump:2.71864 Ang D6.CB and L11.CD2 neighbor-bump: 2.41092 Ang G7.C and A8.CB neighbor-bump: 2.16745 Ang G7.O and A8.CB T0191 69 :HKIEIMKY 1f5sA 143 :AKGEILEK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:2.56518 Ang H2.NE2 and I6.CD1 T0191 77 :LDEID 1f5sA 152 :AKIEG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues T0191 82 :KDAQLIG 1f5sA 172 :ISMFKKA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 90 :VNTIKIE 1f5sA 179 :GLKIAFC Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 104 :NTDGIGA 1f5sA 199 :EKRDLRE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues Number of specific fragments= 10 total=679 Number of alignments=215 # Reading fragments from alignment file # T0191 read from 1f5sA-T0191-local-adpstyle1.pw.a2m.gz # 1f5sA read from 1f5sA-T0191-local-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 30 :KDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVT 1f5sA 63 :LPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVS Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 39 residues other bump:2.90111 Ang F35.CD1 and V37.CG2 other bump:2.91323 Ang F35.CE1 and V37.CG2 other bump:1.73518 Ang P17.CD and L20.CD1 other bump:2.51892 Ang P17.N and L20.CD1 other bump:2.80604 Ang P17.CD and L20.CG Number of specific fragments= 1 total=680 Number of alignments=216 # Reading fragments from alignment file # T0191 read from 1f5sA-T0191-local-adpstyle5.pw.a2m.gz # 1f5sA read from 1f5sA-T0191-local-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 25 :HNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 58 :SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 59 residues other bump:2.94877 Ang L21.CD2 and I57.CD1 other bump:3.08887 Ang L21.CD1 and E56.OE2 other bump:2.60666 Ang D19.CB and Y53.OH other bump:2.81574 Ang K47.CG and M51.SD other bump:2.49279 Ang T43.O and P45.CD self-bump: 1.36504 Ang P45.N and P45.CD other bump:2.80021 Ang T43.CG2 and P45.CD other bump:1.88089 Ang T43.C and P45.CD neighbor-bump: 1.8344 Ang I44.N and P45.CD other bump:2.55345 Ang T43.CA and P45.CD other bump:2.45455 Ang T43.CB and P45.CD other bump:1.94324 Ang T43.OG1 and P45.CD self-bump: 2.21274 Ang P45.N and P45.CG other bump:1.73423 Ang T43.CG2 and P45.CG other bump:2.76508 Ang T43.C and P45.CG other bump:2.9113 Ang T43.CA and P45.CG other bump:2.1208 Ang T43.CB and P45.CG other bump:1.89311 Ang T43.OG1 and P45.CG other bump:2.59105 Ang T43.OG1 and P45.CB other bump:2.90111 Ang F40.CD1 and V42.CG2 other bump:2.91323 Ang F40.CE1 and V42.CG2 other bump:1.73518 Ang P22.CD and L25.CD1 other bump:2.51892 Ang P22.N and L25.CD1 other bump:2.80604 Ang P22.CD and L25.CG Number of specific fragments= 1 total=681 Number of alignments=217 # Reading fragments from alignment file # T0191 read from 1f5sA-T0191-vit-adpstyle1.pw.a2m.gz # 1f5sA read from 1f5sA-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 30 :KDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVT 1f5sA 63 :LPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVS Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 39 residues other bump:2.90111 Ang F35.CD1 and V37.CG2 other bump:2.91323 Ang F35.CE1 and V37.CG2 other bump:1.73518 Ang P17.CD and L20.CD1 other bump:2.51892 Ang P17.N and L20.CD1 other bump:2.80604 Ang P17.CD and L20.CG Number of specific fragments= 1 total=682 Number of alignments=218 # Reading fragments from alignment file # T0191 read from 1f5sA-T0191-vit-adpstyle5.pw.a2m.gz # 1f5sA read from 1f5sA-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 25 :HNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 58 :SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 24 clashes (null) has 24 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 59 residues other bump:2.94877 Ang L21.CD2 and I57.CD1 other bump:3.08887 Ang L21.CD1 and E56.OE2 other bump:2.60666 Ang D19.CB and Y53.OH other bump:2.81574 Ang K47.CG and M51.SD other bump:2.49279 Ang T43.O and P45.CD self-bump: 1.36504 Ang P45.N and P45.CD other bump:2.80021 Ang T43.CG2 and P45.CD other bump:1.88089 Ang T43.C and P45.CD neighbor-bump: 1.8344 Ang I44.N and P45.CD other bump:2.55345 Ang T43.CA and P45.CD other bump:2.45455 Ang T43.CB and P45.CD other bump:1.94324 Ang T43.OG1 and P45.CD self-bump: 2.21274 Ang P45.N and P45.CG other bump:1.73423 Ang T43.CG2 and P45.CG other bump:2.76508 Ang T43.C and P45.CG other bump:2.9113 Ang T43.CA and P45.CG other bump:2.1208 Ang T43.CB and P45.CG other bump:1.89311 Ang T43.OG1 and P45.CG other bump:2.59105 Ang T43.OG1 and P45.CB other bump:2.90111 Ang F40.CD1 and V42.CG2 other bump:2.91323 Ang F40.CE1 and V42.CG2 other bump:1.73518 Ang P22.CD and L25.CD1 other bump:2.51892 Ang P22.N and L25.CD1 other bump:2.80604 Ang P22.CD and L25.CG Number of specific fragments= 1 total=683 Number of alignments=219 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDK 1f5sA 3 :KKKKLILFDFDSTLVNNETIDEIAREAG Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:2.77157 Ang A25.CA and D28.OD2 other bump:2.58981 Ang A25.C and D28.OD2 other bump:1.88891 Ang A25.O and D28.OD2 other bump:2.62758 Ang P19.CB and H22.CD2 other bump:2.96198 Ang P19.CG and H22.CD2 other bump:1.52093 Ang I9.CB and H15.NE2 other bump:1.99895 Ang I9.CG1 and H15.NE2 other bump:1.48459 Ang I9.CG2 and H15.NE2 other bump:3.04311 Ang I9.CD1 and H15.NE2 other bump:2.66853 Ang I9.CB and H15.CE1 other bump:2.62617 Ang I9.CG1 and H15.CE1 other bump:2.75107 Ang I9.CG2 and H15.CE1 other bump:3.23375 Ang I9.CG2 and H15.ND1 other bump:2.36751 Ang I9.CB and H15.CD2 other bump:1.26652 Ang I9.CG2 and H15.CD2 other bump:2.58208 Ang G10.O and H15.CD2 other bump:2.6074 Ang I9.CG2 and H15.CG other bump:2.91333 Ang I9.CD1 and E14.OE2 neighbor-bump: 2.69112 Ang P12.C and V13.CB neighbor-bump: 2.52689 Ang I9.CG2 and G10.O T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 3 total=686 Number of alignments=220 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 3 :NAKTKVIG 1f5sA 3 :KKKKLILF Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:2.9426 Ang K6.CE and I8.CD1 T0191 18 :HS 1f5sA 16 :LV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 21 :SPIMHNAAFKDKGL 1f5sA 18 :NNETIDEIAREAGV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues neighbor-bump: 2.39063 Ang S2.N and P3.CD neighbor-bump: 2.79136 Ang S2.OG and P3.CD T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 5 total=691 Number of alignments=221 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=693 Number of alignments=222 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGYN 1f5sA 120 :ANRLIVKDGKLTGDV Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues neighbor-bump: 3.23129 Ang Y15.CE2 and N16.C other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=695 Number of alignments=223 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKD 1f5sA 3 :KKKKLILFDFDSTLVNNETIDEIAREA Fragment has 17 clashes (null) has 17 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:2.62758 Ang P19.CB and H22.CD2 other bump:2.96198 Ang P19.CG and H22.CD2 other bump:1.52093 Ang I9.CB and H15.NE2 other bump:1.99895 Ang I9.CG1 and H15.NE2 other bump:1.48459 Ang I9.CG2 and H15.NE2 other bump:3.04311 Ang I9.CD1 and H15.NE2 other bump:2.66853 Ang I9.CB and H15.CE1 other bump:2.62617 Ang I9.CG1 and H15.CE1 other bump:2.75107 Ang I9.CG2 and H15.CE1 other bump:3.23375 Ang I9.CG2 and H15.ND1 other bump:2.36751 Ang I9.CB and H15.CD2 other bump:1.26652 Ang I9.CG2 and H15.CD2 other bump:2.58208 Ang G10.O and H15.CD2 other bump:2.6074 Ang I9.CG2 and H15.CG other bump:2.91333 Ang I9.CD1 and E14.OE2 neighbor-bump: 2.69112 Ang P12.C and V13.CB neighbor-bump: 2.52689 Ang I9.CG2 and G10.O T0191 42 :DV 1f5sA 30 :GV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 4 total=699 Number of alignments=224 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 3 :NAKTKVIGLI 1f5sA 3 :KKKKLILFDF Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.67405 Ang I11.CG2 and G12.N other bump:2.9426 Ang K6.CE and I8.CD1 T0191 18 :HSFSPIMHNAAFKDKGL 1f5sA 15 :TLVNNETIDEIAREAGV Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 19 residues other bump:3.0617 Ang F4.CE2 and P6.C other bump:2.33445 Ang F4.CE2 and P6.O neighbor-bump: 2.39063 Ang S5.N and P6.CD neighbor-bump: 2.76517 Ang S5.OG and P6.CD T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 88 :GAVNTIKIEDGK 1f5sA 118 :AFANRLIVKDGK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 14 residues T0191 107 :GI 1f5sA 209 :YI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 5 total=704 Number of alignments=225 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=706 Number of alignments=226 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 88 :GAVNTIKIEDGKAIGY 1f5sA 118 :AFANRLIVKDGKLTGD Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:1.83316 Ang K8.CD and I15.CD1 other bump:2.18978 Ang K8.CE and I15.CD1 other bump:2.45083 Ang K8.NZ and I15.CD1 other bump:2.76137 Ang K8.CD and I15.CG1 Number of specific fragments= 2 total=708 Number of alignments=227 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAFKDK 1f5sA 3 :KKKKLILFDFDSTLVNNETIDEIAREAG Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:2.77157 Ang A25.CA and D28.OD2 other bump:2.58981 Ang A25.C and D28.OD2 other bump:1.88891 Ang A25.O and D28.OD2 other bump:2.62758 Ang P19.CB and H22.CD2 other bump:2.96198 Ang P19.CG and H22.CD2 other bump:1.52093 Ang I9.CB and H15.NE2 other bump:1.99895 Ang I9.CG1 and H15.NE2 other bump:1.48459 Ang I9.CG2 and H15.NE2 other bump:3.04311 Ang I9.CD1 and H15.NE2 other bump:2.66853 Ang I9.CB and H15.CE1 other bump:2.62617 Ang I9.CG1 and H15.CE1 other bump:2.75107 Ang I9.CG2 and H15.CE1 other bump:3.23375 Ang I9.CG2 and H15.ND1 other bump:2.36751 Ang I9.CB and H15.CD2 other bump:1.26652 Ang I9.CG2 and H15.CD2 other bump:2.58208 Ang G10.O and H15.CD2 other bump:2.6074 Ang I9.CG2 and H15.CG other bump:2.91333 Ang I9.CD1 and E14.OE2 neighbor-bump: 2.69112 Ang P12.C and V13.CB neighbor-bump: 2.52689 Ang I9.CG2 and G10.O T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 3 total=711 Number of alignments=228 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 5 :KTKVIGLIGHPVEHSFSPIMHNAAF 1f5sA 3 :KKKKLILFDFDSTLVNNETIDEIAR Fragment has 17 clashes (null) has 17 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.62758 Ang P19.CB and H22.CD2 other bump:2.96198 Ang P19.CG and H22.CD2 other bump:1.99895 Ang I9.CG1 and H15.NE2 other bump:1.52093 Ang I9.CB and H15.NE2 other bump:1.48459 Ang I9.CG2 and H15.NE2 other bump:3.04311 Ang I9.CD1 and H15.NE2 other bump:2.62617 Ang I9.CG1 and H15.CE1 other bump:2.66853 Ang I9.CB and H15.CE1 other bump:2.75107 Ang I9.CG2 and H15.CE1 other bump:3.23375 Ang I9.CG2 and H15.ND1 other bump:2.36751 Ang I9.CB and H15.CD2 other bump:1.26652 Ang I9.CG2 and H15.CD2 other bump:2.58208 Ang G10.O and H15.CD2 other bump:2.6074 Ang I9.CG2 and H15.CG other bump:2.91333 Ang I9.CD1 and E14.OE2 neighbor-bump: 2.69112 Ang P12.C and V13.CB neighbor-bump: 2.52689 Ang I9.CG2 and G10.O T0191 31 :DKGL 1f5sA 28 :EAGV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 44 :LPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 77 :PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 40 residues other bump:3.02994 Ang L2.CD1 and E37.OE2 other bump:2.81574 Ang K28.CG and M32.SD other bump:2.49279 Ang T24.O and P26.CD self-bump: 1.36504 Ang P26.N and P26.CD other bump:2.80021 Ang T24.CG2 and P26.CD other bump:1.88089 Ang T24.C and P26.CD neighbor-bump: 1.8344 Ang I25.N and P26.CD other bump:2.55345 Ang T24.CA and P26.CD other bump:2.45455 Ang T24.CB and P26.CD other bump:1.94324 Ang T24.OG1 and P26.CD self-bump: 2.21274 Ang P26.N and P26.CG other bump:1.73423 Ang T24.CG2 and P26.CG other bump:2.76508 Ang T24.C and P26.CG other bump:2.9113 Ang T24.CA and P26.CG other bump:2.1208 Ang T24.CB and P26.CG other bump:1.89311 Ang T24.OG1 and P26.CG other bump:2.59105 Ang T24.OG1 and P26.CB other bump:2.90111 Ang F21.CD1 and V23.CG2 other bump:2.91323 Ang F21.CE1 and V23.CG2 other bump:2.51892 Ang P3.N and L6.CD1 other bump:1.73519 Ang P3.CD and L6.CD1 other bump:2.80604 Ang P3.CD and L6.CG T0191 90 :VNTIKIEDGK 1f5sA 120 :ANRLIVKDGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 12 residues neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 4 total=715 Number of alignments=229 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=717 Number of alignments=230 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 43 :VLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 1f5sA 76 :TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 41 residues other bump:2.94877 Ang L3.CD2 and I39.CD1 other bump:3.08886 Ang L3.CD1 and E38.OE2 other bump:2.81574 Ang K29.CG and M33.SD other bump:2.49279 Ang T25.O and P27.CD self-bump: 1.36504 Ang P27.N and P27.CD other bump:2.80021 Ang T25.CG2 and P27.CD other bump:1.88089 Ang T25.C and P27.CD neighbor-bump: 1.8344 Ang I26.N and P27.CD other bump:2.55345 Ang T25.CA and P27.CD other bump:2.45455 Ang T25.CB and P27.CD other bump:1.94324 Ang T25.OG1 and P27.CD self-bump: 2.21274 Ang P27.N and P27.CG other bump:1.73423 Ang T25.CG2 and P27.CG other bump:2.76508 Ang T25.C and P27.CG other bump:2.9113 Ang T25.CA and P27.CG other bump:2.1208 Ang T25.CB and P27.CG other bump:1.89311 Ang T25.OG1 and P27.CG other bump:2.59105 Ang T25.OG1 and P27.CB other bump:2.90111 Ang F22.CD1 and V24.CG2 other bump:2.91323 Ang F22.CE1 and V24.CG2 other bump:2.51892 Ang P4.N and L7.CD1 other bump:1.73518 Ang P4.CD and L7.CD1 other bump:2.80604 Ang P4.CD and L7.CG T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 2 total=719 Number of alignments=231 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-local-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-local-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 1 total=720 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-local-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-local-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 64 :NVTIPHKIEIMKYLDEID 1f5sA 97 :VVSGGFDIAVNKIKEKLG Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.81574 Ang K8.CG and M12.SD other bump:2.49279 Ang T4.O and P6.CD other bump:2.80021 Ang T4.CG2 and P6.CD other bump:1.88089 Ang T4.C and P6.CD neighbor-bump: 1.8344 Ang I5.N and P6.CD self-bump: 1.36504 Ang P6.N and P6.CD other bump:2.55345 Ang T4.CA and P6.CD other bump:2.45455 Ang T4.CB and P6.CD other bump:1.94324 Ang T4.OG1 and P6.CD other bump:1.73423 Ang T4.CG2 and P6.CG other bump:2.76508 Ang T4.C and P6.CG self-bump: 2.21274 Ang P6.N and P6.CG other bump:2.9113 Ang T4.CA and P6.CG other bump:2.1208 Ang T4.CB and P6.CG other bump:1.89311 Ang T4.OG1 and P6.CG other bump:2.59105 Ang T4.OG1 and P6.CB T0191 85 :QLIGAVNTIKIEDGKAIGY 1f5sA 115 :LDYAFANRLIVKDGKLTGD Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.83316 Ang K11.CD and I18.CD1 other bump:2.18978 Ang K11.CE and I18.CD1 other bump:2.45083 Ang K11.NZ and I18.CD1 other bump:2.76137 Ang K11.CD and I18.CG1 Number of specific fragments= 2 total=722 Number of alignments=232 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-simpleSW-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-simpleSW-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 29 :FKDKGLNYVYVAFDVLPENLKYVID 1f5sA 175 :FKKAGLKIAFCAKPILKEKADICIE Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 27 residues other bump:2.31691 Ang F2.CE2 and L21.CD2 other bump:2.18259 Ang F2.CZ and L21.CD2 other bump:3.02492 Ang Y9.C and L21.CD2 other bump:2.65299 Ang V10.N and L21.CD2 other bump:2.93933 Ang V10.CA and L21.CD2 other bump:2.7004 Ang V10.CB and L21.CD2 other bump:1.56227 Ang V10.CG2 and L21.CD2 other bump:3.03541 Ang V10.N and L21.CD1 other bump:2.59605 Ang V10.CA and L21.CD1 other bump:1.34424 Ang V10.CB and L21.CD1 other bump:2.43437 Ang V10.CG1 and L21.CD1 other bump:1.36535 Ang V10.CG2 and L21.CD1 other bump:2.42699 Ang V10.CB and L21.CG other bump:1.24121 Ang V10.CG2 and L21.CG other bump:2.73471 Ang V10.CG2 and L21.CB other bump:2.07973 Ang V10.CG1 and A13.CB other bump:3.16765 Ang F2.CZ and V10.CG2 other bump:2.26901 Ang L7.CD2 and Y9.OH other bump:3.02214 Ang L7.CG and Y9.CZ other bump:2.44416 Ang L7.CD2 and Y9.CZ other bump:2.19867 Ang L7.CG and Y9.CE1 other bump:1.98832 Ang L7.CD2 and Y9.CE1 Number of specific fragments= 1 total=723 Number of alignments=233 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-simpleSW-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-simpleSW-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 27 :AAFKDKGLNYVYVAFDVLPENL 1f5sA 173 :SMFKKAGLKIAFCAKPILKEKA Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.75769 Ang V12.N and L23.CD2 other bump:2.29348 Ang V12.CA and L23.CD2 other bump:1.10794 Ang V12.CB and L23.CD2 other bump:2.32249 Ang V12.CG1 and L23.CD2 other bump:0.955466 Ang V12.CG2 and L23.CD2 other bump:2.92405 Ang F4.CD2 and L23.CD1 other bump:1.64929 Ang F4.CE2 and L23.CD1 other bump:2.17523 Ang F4.CZ and L23.CD1 other bump:1.6503 Ang V12.CG2 and L23.CD1 other bump:2.87839 Ang F4.CE2 and L23.CG other bump:2.87133 Ang V12.N and L23.CG other bump:3.03456 Ang V12.CA and L23.CG other bump:2.40602 Ang V12.CB and L23.CG other bump:1.2482 Ang V12.CG2 and L23.CG other bump:2.59604 Ang V12.CG2 and L23.CB other bump:2.07973 Ang V12.CG1 and A15.CB other bump:3.16765 Ang F4.CZ and V12.CG2 other bump:2.26901 Ang L9.CD2 and Y11.OH other bump:3.02214 Ang L9.CG and Y11.CZ other bump:2.44416 Ang L9.CD2 and Y11.CZ other bump:2.19867 Ang L9.CG and Y11.CE1 other bump:1.98832 Ang L9.CD2 and Y11.CE1 Number of specific fragments= 1 total=724 Number of alignments=234 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-vit-adpstyle1.pw.a2m.gz # 1f5sA read from T0191-1f5sA-vit-adpstyle1.pw.a2m.gz # found chain 1f5sA in template set T0191 90 :VNTIKIEDGKAIGY 1f5sA 120 :ANRLIVKDGKLTGD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues other bump:1.83316 Ang K6.CD and I13.CD1 other bump:2.18978 Ang K6.CE and I13.CD1 other bump:2.45083 Ang K6.NZ and I13.CD1 other bump:2.76137 Ang K6.CD and I13.CG1 neighbor-bump: 2.57019 Ang V2.CG1 and N3.O Number of specific fragments= 1 total=725 # Reading fragments from alignment file # T0191 read from T0191-1f5sA-vit-adpstyle5.pw.a2m.gz # 1f5sA read from T0191-1f5sA-vit-adpstyle5.pw.a2m.gz # found chain 1f5sA in template set T0191 64 :NVTIPHKIEIMKYLDEID 1f5sA 97 :VVSGGFDIAVNKIKEKLG Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 20 residues other bump:2.81574 Ang K8.CG and M12.SD other bump:2.49279 Ang T4.O and P6.CD other bump:2.80021 Ang T4.CG2 and P6.CD other bump:1.88089 Ang T4.C and P6.CD neighbor-bump: 1.8344 Ang I5.N and P6.CD self-bump: 1.36504 Ang P6.N and P6.CD other bump:2.55345 Ang T4.CA and P6.CD other bump:2.45455 Ang T4.CB and P6.CD other bump:1.94324 Ang T4.OG1 and P6.CD other bump:1.73423 Ang T4.CG2 and P6.CG other bump:2.76508 Ang T4.C and P6.CG self-bump: 2.21274 Ang P6.N and P6.CG other bump:2.9113 Ang T4.CA and P6.CG other bump:2.1208 Ang T4.CB and P6.CG other bump:1.89311 Ang T4.OG1 and P6.CG other bump:2.59105 Ang T4.OG1 and P6.CB T0191 85 :QLIGAVNTIKIEDGKAIGY 1f5sA 115 :LDYAFANRLIVKDGKLTGD Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 21 residues other bump:1.83316 Ang K11.CD and I18.CD1 other bump:2.18978 Ang K11.CE and I18.CD1 other bump:2.45083 Ang K11.NZ and I18.CD1 other bump:2.76137 Ang K11.CD and I18.CG1 Number of specific fragments= 2 total=727 Number of alignments=235 # command:# Prefix for input files set to 1a99A/ # command:# reading script from file read-alignments.under # Reading fragments from alignment file # T0191 read from 1a99A-T0191-local-adpstyle1.pw.a2m.gz # 1a99A read from 1a99A-T0191-local-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 100 :AIGYNTD 1a99A 139 :GIGYNVD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues Number of specific fragments= 1 total=728 # Reading fragments from alignment file # T0191 read from 1a99A-T0191-local-adpstyle5.pw.a2m.gz # 1a99A read from 1a99A-T0191-local-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 40 :AFDVLPENLKYVIDGA 1a99A 61 :VFDSNEVLEGKLMAGS Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:1.95449 Ang Y12.O and D15.OD1 other bump:2.64307 Ang E8.OE2 and Y12.CZ other bump:2.80301 Ang E8.CD and Y12.CE2 other bump:1.9557 Ang E8.OE2 and Y12.CE2 T0191 61 :VGFNVT 1a99A 77 :TGFDLV Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues other bump:2.60794 Ang V2.CG1 and F4.CE2 other bump:2.10186 Ang V2.CG1 and F4.CD2 other bump:2.94153 Ang V2.CG1 and F4.CG Number of specific fragments= 2 total=730 Number of alignments=236 # Reading fragments from alignment file # T0191 read from 1a99A-T0191-vit-adpstyle1.pw.a2m.gz # 1a99A read from 1a99A-T0191-vit-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 100 :AIGYNTD 1a99A 139 :GIGYNVD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues Number of specific fragments= 1 total=731 # Reading fragments from alignment file # T0191 read from 1a99A-T0191-vit-adpstyle5.pw.a2m.gz # 1a99A read from 1a99A-T0191-vit-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 40 :AFDVLPENLKYVIDGA 1a99A 61 :VFDSNEVLEGKLMAGS Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 18 residues other bump:1.95449 Ang Y12.O and D15.OD1 other bump:2.64307 Ang E8.OE2 and Y12.CZ other bump:2.80301 Ang E8.CD and Y12.CE2 other bump:1.9557 Ang E8.OE2 and Y12.CE2 T0191 61 :VGFNVT 1a99A 77 :TGFDLV Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues other bump:2.60794 Ang V2.CG1 and F4.CE2 other bump:2.10186 Ang V2.CG1 and F4.CD2 other bump:2.94153 Ang V2.CG1 and F4.CG Number of specific fragments= 2 total=733 Number of alignments=237 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 4 :AKTKVIGL 1a99A 30 :KTLHIYNW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYL 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQL Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 3 total=736 Number of alignments=238 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 4 :AKTKVI 1a99A 30 :KTLHIY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 15 :PVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 36 :NWSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:2.49181 Ang P2.CD and V26.O other bump:2.93725 Ang P2.CG and Y25.CZ other bump:3.09447 Ang F16.CZ and Y23.C other bump:2.89904 Ang F16.CD2 and Y23.CE2 other bump:2.93264 Ang F16.CG and Y23.CD2 other bump:2.29811 Ang F16.CD2 and Y23.CD2 other bump:1.91288 Ang F16.CE2 and Y23.CD2 other bump:2.30571 Ang F16.CZ and Y23.CD2 other bump:2.22132 Ang H12.CE1 and Y23.CG other bump:2.48312 Ang F16.CE2 and Y23.CG other bump:2.90643 Ang H12.ND1 and Y23.CB other bump:1.61187 Ang H12.CE1 and Y23.CB other bump:1.97413 Ang H12.NE2 and Y23.CB other bump:2.81027 Ang F16.CE1 and Y23.CB other bump:2.60979 Ang F16.CE2 and Y23.CB other bump:1.84125 Ang F16.CZ and Y23.CB other bump:2.89534 Ang H12.NE2 and Y23.CA other bump:2.6286 Ang F16.CE2 and Y23.CA other bump:2.21613 Ang F16.CZ and Y23.CA other bump:1.79891 Ang F16.CE2 and Y23.N other bump:2.0426 Ang F16.CZ and Y23.N other bump:2.49519 Ang F16.CE2 and N22.C other bump:3.236 Ang F16.CZ and N22.C other bump:2.90131 Ang F16.CE2 and N22.CA other bump:3.0095 Ang F16.CD2 and L21.C other bump:3.28467 Ang F16.CE2 and L21.C other bump:1.90272 Ang F16.CD2 and L21.O other bump:2.51584 Ang F16.CE2 and L21.O other bump:2.27138 Ang A14.O and D18.OD2 other bump:2.90917 Ang H12.CD2 and F16.CZ other bump:2.40639 Ang H12.CE1 and F16.CZ other bump:1.99186 Ang H12.NE2 and F16.CZ other bump:2.82281 Ang H12.CG and F16.CE1 other bump:2.0954 Ang H12.CD2 and F16.CE1 other bump:3.02144 Ang H12.ND1 and F16.CE1 other bump:2.52401 Ang H12.CE1 and F16.CE1 other bump:1.87048 Ang H12.NE2 and F16.CE1 other bump:2.77613 Ang F7.CE2 and H12.N other bump:3.23445 Ang F7.CZ and H12.N other bump:3.0576 Ang F7.CE2 and M11.C other bump:2.99218 Ang F7.CZ and M11.C other bump:2.74202 Ang S8.N and M11.CE other bump:1.93071 Ang F7.CG and M11.CE other bump:2.74293 Ang F7.CD2 and M11.CE other bump:2.51372 Ang F7.CZ and M11.CE other bump:1.08514 Ang F7.CD1 and M11.CE other bump:1.58421 Ang F7.CE1 and M11.CE other bump:2.74828 Ang F7.CG and M11.SD other bump:3.19275 Ang F7.CD2 and M11.SD other bump:2.8116 Ang F7.CE2 and M11.SD other bump:1.70162 Ang F7.CZ and M11.SD other bump:1.56886 Ang F7.CD1 and M11.SD other bump:0.43463 Ang F7.CE1 and M11.SD other bump:2.68878 Ang F7.CE2 and M11.CG other bump:1.40489 Ang F7.CZ and M11.CG other bump:1.73586 Ang F7.CE1 and M11.CG other bump:2.97084 Ang F7.CD2 and M11.CB other bump:1.91184 Ang F7.CE2 and M11.CB other bump:1.43951 Ang F7.CZ and M11.CB other bump:2.37401 Ang F7.CE1 and M11.CB other bump:2.86443 Ang F7.CE2 and M11.CA other bump:2.70625 Ang F7.CZ and M11.CA other bump:2.11573 Ang V3.O and S6.OG neighbor-bump: 2.04269 Ang G1.C and P2.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYLDE 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQLTA Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 33 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG T0191 88 :GA 1a99A 96 :GV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 108 :I 1a99A 368 :S Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues Number of specific fragments= 5 total=741 Number of alignments=239 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=743 Number of alignments=240 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 15 :PVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 36 :NWSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:2.49181 Ang P2.CD and V26.O other bump:2.93725 Ang P2.CG and Y25.CZ other bump:3.09447 Ang F16.CZ and Y23.C other bump:2.89904 Ang F16.CD2 and Y23.CE2 other bump:2.93264 Ang F16.CG and Y23.CD2 other bump:2.29811 Ang F16.CD2 and Y23.CD2 other bump:1.91288 Ang F16.CE2 and Y23.CD2 other bump:2.30571 Ang F16.CZ and Y23.CD2 other bump:2.22132 Ang H12.CE1 and Y23.CG other bump:2.48312 Ang F16.CE2 and Y23.CG other bump:2.90643 Ang H12.ND1 and Y23.CB other bump:1.61187 Ang H12.CE1 and Y23.CB other bump:1.97413 Ang H12.NE2 and Y23.CB other bump:2.81027 Ang F16.CE1 and Y23.CB other bump:2.60979 Ang F16.CE2 and Y23.CB other bump:1.84125 Ang F16.CZ and Y23.CB other bump:2.89534 Ang H12.NE2 and Y23.CA other bump:2.6286 Ang F16.CE2 and Y23.CA other bump:2.21613 Ang F16.CZ and Y23.CA other bump:1.79891 Ang F16.CE2 and Y23.N other bump:2.0426 Ang F16.CZ and Y23.N other bump:2.49519 Ang F16.CE2 and N22.C other bump:3.236 Ang F16.CZ and N22.C other bump:2.90131 Ang F16.CE2 and N22.CA other bump:3.0095 Ang F16.CD2 and L21.C other bump:3.28467 Ang F16.CE2 and L21.C other bump:1.90272 Ang F16.CD2 and L21.O other bump:2.51584 Ang F16.CE2 and L21.O other bump:2.27138 Ang A14.O and D18.OD2 other bump:2.90917 Ang H12.CD2 and F16.CZ other bump:2.40639 Ang H12.CE1 and F16.CZ other bump:1.99186 Ang H12.NE2 and F16.CZ other bump:2.82281 Ang H12.CG and F16.CE1 other bump:2.0954 Ang H12.CD2 and F16.CE1 other bump:3.02144 Ang H12.ND1 and F16.CE1 other bump:2.52401 Ang H12.CE1 and F16.CE1 other bump:1.87048 Ang H12.NE2 and F16.CE1 other bump:2.77613 Ang F7.CE2 and H12.N other bump:3.23445 Ang F7.CZ and H12.N other bump:3.0576 Ang F7.CE2 and M11.C other bump:2.99218 Ang F7.CZ and M11.C other bump:2.74202 Ang S8.N and M11.CE other bump:1.93071 Ang F7.CG and M11.CE other bump:2.74293 Ang F7.CD2 and M11.CE other bump:2.51372 Ang F7.CZ and M11.CE other bump:1.08514 Ang F7.CD1 and M11.CE other bump:1.58421 Ang F7.CE1 and M11.CE other bump:2.74828 Ang F7.CG and M11.SD other bump:3.19275 Ang F7.CD2 and M11.SD other bump:2.8116 Ang F7.CE2 and M11.SD other bump:1.70162 Ang F7.CZ and M11.SD other bump:1.56886 Ang F7.CD1 and M11.SD other bump:0.43463 Ang F7.CE1 and M11.SD other bump:2.68878 Ang F7.CE2 and M11.CG other bump:1.40489 Ang F7.CZ and M11.CG other bump:1.73586 Ang F7.CE1 and M11.CG other bump:2.97084 Ang F7.CD2 and M11.CB other bump:1.91184 Ang F7.CE2 and M11.CB other bump:1.43951 Ang F7.CZ and M11.CB other bump:2.37401 Ang F7.CE1 and M11.CB other bump:2.86443 Ang F7.CE2 and M11.CA other bump:2.70625 Ang F7.CZ and M11.CA other bump:2.11573 Ang V3.O and S6.OG neighbor-bump: 2.04269 Ang G1.C and P2.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKI 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSAS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 25 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=745 Number of alignments=241 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 9 :IGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 30 :KTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 69 clashes (null) has 69 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 37 residues other bump:3.01154 Ang H7.NE2 and F34.CE2 other bump:2.41992 Ang H7.CE1 and F34.CD2 other bump:2.24661 Ang H7.NE2 and F34.CD2 other bump:2.4918 Ang P8.CD and V32.O other bump:2.93728 Ang P8.CG and Y31.CZ other bump:3.09447 Ang F22.CZ and Y29.C other bump:2.89904 Ang F22.CD2 and Y29.CE2 other bump:2.73986 Ang L4.CD1 and Y29.CE1 other bump:2.93264 Ang F22.CG and Y29.CD2 other bump:2.29811 Ang F22.CD2 and Y29.CD2 other bump:1.91288 Ang F22.CE2 and Y29.CD2 other bump:2.30571 Ang F22.CZ and Y29.CD2 other bump:2.79259 Ang L4.CD1 and Y29.CD1 other bump:2.22132 Ang H18.CE1 and Y29.CG other bump:2.48312 Ang F22.CE2 and Y29.CG other bump:2.90643 Ang H18.ND1 and Y29.CB other bump:1.61187 Ang H18.CE1 and Y29.CB other bump:1.97413 Ang H18.NE2 and Y29.CB other bump:2.81027 Ang F22.CE1 and Y29.CB other bump:2.60979 Ang F22.CE2 and Y29.CB other bump:1.84125 Ang F22.CZ and Y29.CB other bump:2.89534 Ang H18.NE2 and Y29.CA other bump:2.6286 Ang F22.CE2 and Y29.CA other bump:2.21613 Ang F22.CZ and Y29.CA other bump:1.79891 Ang F22.CE2 and Y29.N other bump:2.0426 Ang F22.CZ and Y29.N other bump:2.49519 Ang F22.CE2 and N28.C other bump:3.236 Ang F22.CZ and N28.C other bump:2.90131 Ang F22.CE2 and N28.CA other bump:3.0095 Ang F22.CD2 and L27.C other bump:3.28467 Ang F22.CE2 and L27.C other bump:1.90272 Ang F22.CD2 and L27.O other bump:2.51584 Ang F22.CE2 and L27.O other bump:2.27138 Ang A20.O and D24.OD2 other bump:2.90917 Ang H18.CD2 and F22.CZ other bump:2.40639 Ang H18.CE1 and F22.CZ other bump:1.99186 Ang H18.NE2 and F22.CZ other bump:2.82281 Ang H18.CG and F22.CE1 other bump:2.0954 Ang H18.CD2 and F22.CE1 other bump:3.02144 Ang H18.ND1 and F22.CE1 other bump:2.52401 Ang H18.CE1 and F22.CE1 other bump:1.87048 Ang H18.NE2 and F22.CE1 other bump:2.77613 Ang F13.CE2 and H18.N other bump:3.23445 Ang F13.CZ and H18.N other bump:3.0576 Ang F13.CE2 and M17.C other bump:2.99218 Ang F13.CZ and M17.C other bump:2.74202 Ang S14.N and M17.CE other bump:1.93071 Ang F13.CG and M17.CE other bump:2.74293 Ang F13.CD2 and M17.CE other bump:2.51372 Ang F13.CZ and M17.CE other bump:1.08514 Ang F13.CD1 and M17.CE other bump:1.58421 Ang F13.CE1 and M17.CE other bump:2.74828 Ang F13.CG and M17.SD other bump:3.19275 Ang F13.CD2 and M17.SD other bump:2.8116 Ang F13.CE2 and M17.SD other bump:1.70162 Ang F13.CZ and M17.SD other bump:1.56886 Ang F13.CD1 and M17.SD other bump:0.43463 Ang F13.CE1 and M17.SD other bump:2.68878 Ang F13.CE2 and M17.CG other bump:1.40489 Ang F13.CZ and M17.CG other bump:1.73586 Ang F13.CE1 and M17.CG other bump:2.97084 Ang F13.CD2 and M17.CB other bump:1.91184 Ang F13.CE2 and M17.CB other bump:1.43951 Ang F13.CZ and M17.CB other bump:2.37401 Ang F13.CE1 and M17.CB other bump:2.86443 Ang F13.CE2 and M17.CA other bump:2.70625 Ang F13.CZ and M17.CA other bump:2.11573 Ang V9.O and S12.OG neighbor-bump: 2.04269 Ang H7.C and P8.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYL 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQL Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=747 Number of alignments=242 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 4 :AKTKVI 1a99A 30 :KTLHIY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues T0191 15 :PVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 36 :NWSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 64 clashes (null) has 64 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:2.49181 Ang P2.CD and V26.O other bump:2.93725 Ang P2.CG and Y25.CZ other bump:3.09447 Ang F16.CZ and Y23.C other bump:2.89904 Ang F16.CD2 and Y23.CE2 other bump:2.93264 Ang F16.CG and Y23.CD2 other bump:2.29811 Ang F16.CD2 and Y23.CD2 other bump:1.91288 Ang F16.CE2 and Y23.CD2 other bump:2.30571 Ang F16.CZ and Y23.CD2 other bump:2.22132 Ang H12.CE1 and Y23.CG other bump:2.48312 Ang F16.CE2 and Y23.CG other bump:2.90643 Ang H12.ND1 and Y23.CB other bump:1.61187 Ang H12.CE1 and Y23.CB other bump:1.97413 Ang H12.NE2 and Y23.CB other bump:2.81027 Ang F16.CE1 and Y23.CB other bump:2.60979 Ang F16.CE2 and Y23.CB other bump:1.84125 Ang F16.CZ and Y23.CB other bump:2.89534 Ang H12.NE2 and Y23.CA other bump:2.6286 Ang F16.CE2 and Y23.CA other bump:2.21613 Ang F16.CZ and Y23.CA other bump:1.79891 Ang F16.CE2 and Y23.N other bump:2.0426 Ang F16.CZ and Y23.N other bump:2.49519 Ang F16.CE2 and N22.C other bump:3.236 Ang F16.CZ and N22.C other bump:2.90131 Ang F16.CE2 and N22.CA other bump:3.0095 Ang F16.CD2 and L21.C other bump:3.28467 Ang F16.CE2 and L21.C other bump:1.90272 Ang F16.CD2 and L21.O other bump:2.51584 Ang F16.CE2 and L21.O other bump:2.27138 Ang A14.O and D18.OD2 other bump:2.90917 Ang H12.CD2 and F16.CZ other bump:2.40639 Ang H12.CE1 and F16.CZ other bump:1.99186 Ang H12.NE2 and F16.CZ other bump:2.82281 Ang H12.CG and F16.CE1 other bump:2.0954 Ang H12.CD2 and F16.CE1 other bump:3.02144 Ang H12.ND1 and F16.CE1 other bump:2.52401 Ang H12.CE1 and F16.CE1 other bump:1.87048 Ang H12.NE2 and F16.CE1 other bump:2.77613 Ang F7.CE2 and H12.N other bump:3.23445 Ang F7.CZ and H12.N other bump:3.0576 Ang F7.CE2 and M11.C other bump:2.99218 Ang F7.CZ and M11.C other bump:2.74202 Ang S8.N and M11.CE other bump:1.93071 Ang F7.CG and M11.CE other bump:2.74293 Ang F7.CD2 and M11.CE other bump:2.51372 Ang F7.CZ and M11.CE other bump:1.08514 Ang F7.CD1 and M11.CE other bump:1.58421 Ang F7.CE1 and M11.CE other bump:2.74828 Ang F7.CG and M11.SD other bump:3.19275 Ang F7.CD2 and M11.SD other bump:2.8116 Ang F7.CE2 and M11.SD other bump:1.70162 Ang F7.CZ and M11.SD other bump:1.56886 Ang F7.CD1 and M11.SD other bump:0.43463 Ang F7.CE1 and M11.SD other bump:2.68878 Ang F7.CE2 and M11.CG other bump:1.40489 Ang F7.CZ and M11.CG other bump:1.73586 Ang F7.CE1 and M11.CG other bump:2.97084 Ang F7.CD2 and M11.CB other bump:1.91184 Ang F7.CE2 and M11.CB other bump:1.43951 Ang F7.CZ and M11.CB other bump:2.37401 Ang F7.CE1 and M11.CB other bump:2.86443 Ang F7.CE2 and M11.CA other bump:2.70625 Ang F7.CZ and M11.CA other bump:2.11573 Ang V3.O and S6.OG neighbor-bump: 2.04269 Ang G1.C and P2.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQLTAG Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 34 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 3 total=750 Number of alignments=243 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=752 Number of alignments=244 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 14 :HPVEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 35 :YNWSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 67 clashes (null) has 67 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 32 residues other bump:3.01155 Ang H2.NE2 and F29.CE2 other bump:2.41993 Ang H2.CE1 and F29.CD2 other bump:2.24662 Ang H2.NE2 and F29.CD2 other bump:2.4918 Ang P3.CD and V27.O other bump:2.93728 Ang P3.CG and Y26.CZ other bump:3.09447 Ang F17.CZ and Y24.C other bump:2.89904 Ang F17.CD2 and Y24.CE2 other bump:2.93264 Ang F17.CG and Y24.CD2 other bump:2.29811 Ang F17.CD2 and Y24.CD2 other bump:1.91288 Ang F17.CE2 and Y24.CD2 other bump:2.30571 Ang F17.CZ and Y24.CD2 other bump:2.22132 Ang H13.CE1 and Y24.CG other bump:2.48312 Ang F17.CE2 and Y24.CG other bump:2.90643 Ang H13.ND1 and Y24.CB other bump:1.61187 Ang H13.CE1 and Y24.CB other bump:1.97413 Ang H13.NE2 and Y24.CB other bump:2.81027 Ang F17.CE1 and Y24.CB other bump:2.60979 Ang F17.CE2 and Y24.CB other bump:1.84125 Ang F17.CZ and Y24.CB other bump:2.89534 Ang H13.NE2 and Y24.CA other bump:2.6286 Ang F17.CE2 and Y24.CA other bump:2.21613 Ang F17.CZ and Y24.CA other bump:1.79891 Ang F17.CE2 and Y24.N other bump:2.0426 Ang F17.CZ and Y24.N other bump:2.49519 Ang F17.CE2 and N23.C other bump:3.236 Ang F17.CZ and N23.C other bump:2.90131 Ang F17.CE2 and N23.CA other bump:3.0095 Ang F17.CD2 and L22.C other bump:3.28467 Ang F17.CE2 and L22.C other bump:1.90272 Ang F17.CD2 and L22.O other bump:2.51584 Ang F17.CE2 and L22.O other bump:2.27138 Ang A15.O and D19.OD2 other bump:2.90917 Ang H13.CD2 and F17.CZ other bump:2.40639 Ang H13.CE1 and F17.CZ other bump:1.99186 Ang H13.NE2 and F17.CZ other bump:2.82281 Ang H13.CG and F17.CE1 other bump:2.0954 Ang H13.CD2 and F17.CE1 other bump:3.02144 Ang H13.ND1 and F17.CE1 other bump:2.52401 Ang H13.CE1 and F17.CE1 other bump:1.87048 Ang H13.NE2 and F17.CE1 other bump:2.77613 Ang F8.CE2 and H13.N other bump:3.23445 Ang F8.CZ and H13.N other bump:3.0576 Ang F8.CE2 and M12.C other bump:2.99218 Ang F8.CZ and M12.C other bump:2.74202 Ang S9.N and M12.CE other bump:1.93071 Ang F8.CG and M12.CE other bump:2.74293 Ang F8.CD2 and M12.CE other bump:2.51372 Ang F8.CZ and M12.CE other bump:1.08514 Ang F8.CD1 and M12.CE other bump:1.58421 Ang F8.CE1 and M12.CE other bump:2.74828 Ang F8.CG and M12.SD other bump:3.19275 Ang F8.CD2 and M12.SD other bump:2.8116 Ang F8.CE2 and M12.SD other bump:1.70162 Ang F8.CZ and M12.SD other bump:1.56886 Ang F8.CD1 and M12.SD other bump:0.43463 Ang F8.CE1 and M12.SD other bump:2.68878 Ang F8.CE2 and M12.CG other bump:1.40489 Ang F8.CZ and M12.CG other bump:1.73586 Ang F8.CE1 and M12.CG other bump:2.97084 Ang F8.CD2 and M12.CB other bump:1.91184 Ang F8.CE2 and M12.CB other bump:1.43951 Ang F8.CZ and M12.CB other bump:2.37401 Ang F8.CE1 and M12.CB other bump:2.86443 Ang F8.CE2 and M12.CA other bump:2.70625 Ang F8.CZ and M12.CA other bump:2.11573 Ang V4.O and S7.OG neighbor-bump: 2.04269 Ang H2.C and P3.CD T0191 49 :KYVIDGAKALGIVGFNVTIPHK 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=754 Number of alignments=245 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-STR-global-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 5 :KTKVIGLI 1a99A 30 :KTLHIYNW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYL 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQL Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 31 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 3 total=757 Number of alignments=246 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-STR-global-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 5 :KTKVIGL 1a99A 30 :KTLHIYN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 16 :VEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 37 :WSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 63 clashes (null) has 63 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:3.09447 Ang F15.CZ and Y22.C other bump:2.89904 Ang F15.CD2 and Y22.CE2 other bump:2.93264 Ang F15.CG and Y22.CD2 other bump:2.29811 Ang F15.CD2 and Y22.CD2 other bump:1.91288 Ang F15.CE2 and Y22.CD2 other bump:2.30571 Ang F15.CZ and Y22.CD2 other bump:2.22132 Ang H11.CE1 and Y22.CG other bump:2.48312 Ang F15.CE2 and Y22.CG other bump:2.90643 Ang H11.ND1 and Y22.CB other bump:1.61187 Ang H11.CE1 and Y22.CB other bump:1.97413 Ang H11.NE2 and Y22.CB other bump:2.81027 Ang F15.CE1 and Y22.CB other bump:2.60979 Ang F15.CE2 and Y22.CB other bump:1.84125 Ang F15.CZ and Y22.CB other bump:2.89534 Ang H11.NE2 and Y22.CA other bump:2.6286 Ang F15.CE2 and Y22.CA other bump:2.21613 Ang F15.CZ and Y22.CA other bump:1.79891 Ang F15.CE2 and Y22.N other bump:2.0426 Ang F15.CZ and Y22.N other bump:2.49519 Ang F15.CE2 and N21.C other bump:3.236 Ang F15.CZ and N21.C other bump:2.90131 Ang F15.CE2 and N21.CA other bump:3.0095 Ang F15.CD2 and L20.C other bump:3.28467 Ang F15.CE2 and L20.C other bump:1.90272 Ang F15.CD2 and L20.O other bump:2.51584 Ang F15.CE2 and L20.O other bump:2.27138 Ang A13.O and D17.OD2 other bump:2.90917 Ang H11.CD2 and F15.CZ other bump:2.40639 Ang H11.CE1 and F15.CZ other bump:1.99186 Ang H11.NE2 and F15.CZ other bump:2.82281 Ang H11.CG and F15.CE1 other bump:2.0954 Ang H11.CD2 and F15.CE1 other bump:3.02144 Ang H11.ND1 and F15.CE1 other bump:2.52401 Ang H11.CE1 and F15.CE1 other bump:1.87048 Ang H11.NE2 and F15.CE1 other bump:2.77613 Ang F6.CE2 and H11.N other bump:3.23445 Ang F6.CZ and H11.N other bump:3.0576 Ang F6.CE2 and M10.C other bump:2.99218 Ang F6.CZ and M10.C other bump:2.74202 Ang S7.N and M10.CE other bump:1.93071 Ang F6.CG and M10.CE other bump:2.74293 Ang F6.CD2 and M10.CE other bump:2.51372 Ang F6.CZ and M10.CE other bump:1.08514 Ang F6.CD1 and M10.CE other bump:1.58421 Ang F6.CE1 and M10.CE other bump:2.74828 Ang F6.CG and M10.SD other bump:3.19275 Ang F6.CD2 and M10.SD other bump:2.8116 Ang F6.CE2 and M10.SD other bump:1.70162 Ang F6.CZ and M10.SD other bump:1.56886 Ang F6.CD1 and M10.SD other bump:0.43463 Ang F6.CE1 and M10.SD other bump:2.68878 Ang F6.CE2 and M10.CG other bump:1.40489 Ang F6.CZ and M10.CG other bump:1.73586 Ang F6.CE1 and M10.CG other bump:2.97084 Ang F6.CD2 and M10.CB other bump:1.91184 Ang F6.CE2 and M10.CB other bump:1.43951 Ang F6.CZ and M10.CB other bump:2.37401 Ang F6.CE1 and M10.CB other bump:2.86443 Ang F6.CE2 and M10.CA other bump:2.70625 Ang F6.CZ and M10.CA other bump:2.11573 Ang V2.O and S5.OG other bump:2.83282 Ang V2.CG2 and S5.OG other bump:2.78447 Ang V2.CG2 and S5.CB T0191 49 :KYVIDGAKALGIVGFNVTIPHKIEIMKYLDE 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSASFLERQLTA Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 33 residues other bump:0.681331 Ang D6.CB and Y29.OH other bump:2.40737 Ang D6.N and Y29.OH other bump:2.20312 Ang D6.C and Y29.OH other bump:1.17813 Ang D6.CA and Y29.OH other bump:1.44651 Ang D6.CG and Y29.OH other bump:2.03464 Ang D6.OD2 and Y29.OH other bump:1.91158 Ang D6.CB and Y29.CZ other bump:3.07778 Ang D6.C and Y29.CZ other bump:2.09285 Ang D6.CA and Y29.CZ other bump:1.77814 Ang D6.CG and Y29.CZ other bump:1.34734 Ang D6.OD2 and Y29.CZ other bump:3.03548 Ang D6.CB and Y29.CE2 other bump:3.17186 Ang D6.C and Y29.CE2 other bump:2.52471 Ang D6.CA and Y29.CE2 other bump:2.86386 Ang D6.CG and Y29.CE2 other bump:2.20049 Ang D6.OD2 and Y29.CE2 other bump:2.64931 Ang D6.CB and Y29.CE1 other bump:2.20926 Ang D6.CG and Y29.CE1 other bump:1.46258 Ang D6.OD2 and Y29.CE1 other bump:2.36103 Ang D6.OD2 and Y29.CD1 other bump:2.61448 Ang E25.O and Y29.CD1 other bump:2.97485 Ang P21.CG and I26.CG1 other bump:2.24314 Ang K2.NZ and E25.OE2 other bump:2.74058 Ang K2.CE and E25.CD other bump:2.69586 Ang K2.NZ and E25.CD other bump:1.76496 Ang K2.CE and E25.CG other bump:2.46508 Ang K2.NZ and E25.CG other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG T0191 88 :G 1a99A 96 :G Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues Number of specific fragments= 4 total=761 Number of alignments=247 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-STR-local-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 17 :EHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 38 :SDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 61 clashes (null) has 61 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 29 residues other bump:3.09447 Ang F14.CZ and Y21.C other bump:2.89904 Ang F14.CD2 and Y21.CE2 other bump:2.93264 Ang F14.CG and Y21.CD2 other bump:2.29811 Ang F14.CD2 and Y21.CD2 other bump:1.91288 Ang F14.CE2 and Y21.CD2 other bump:2.30571 Ang F14.CZ and Y21.CD2 other bump:2.22132 Ang H10.CE1 and Y21.CG other bump:2.48312 Ang F14.CE2 and Y21.CG other bump:2.90643 Ang H10.ND1 and Y21.CB other bump:1.61187 Ang H10.CE1 and Y21.CB other bump:1.97413 Ang H10.NE2 and Y21.CB other bump:2.81027 Ang F14.CE1 and Y21.CB other bump:2.60979 Ang F14.CE2 and Y21.CB other bump:1.84125 Ang F14.CZ and Y21.CB other bump:2.89534 Ang H10.NE2 and Y21.CA other bump:2.6286 Ang F14.CE2 and Y21.CA other bump:2.21613 Ang F14.CZ and Y21.CA other bump:1.79891 Ang F14.CE2 and Y21.N other bump:2.0426 Ang F14.CZ and Y21.N other bump:2.49519 Ang F14.CE2 and N20.C other bump:3.236 Ang F14.CZ and N20.C other bump:2.90131 Ang F14.CE2 and N20.CA other bump:3.0095 Ang F14.CD2 and L19.C other bump:3.28467 Ang F14.CE2 and L19.C other bump:1.90272 Ang F14.CD2 and L19.O other bump:2.51584 Ang F14.CE2 and L19.O other bump:2.27138 Ang A12.O and D16.OD2 other bump:2.90917 Ang H10.CD2 and F14.CZ other bump:2.40639 Ang H10.CE1 and F14.CZ other bump:1.99186 Ang H10.NE2 and F14.CZ other bump:2.82281 Ang H10.CG and F14.CE1 other bump:2.0954 Ang H10.CD2 and F14.CE1 other bump:3.02144 Ang H10.ND1 and F14.CE1 other bump:2.52401 Ang H10.CE1 and F14.CE1 other bump:1.87048 Ang H10.NE2 and F14.CE1 other bump:2.77613 Ang F5.CE2 and H10.N other bump:3.23445 Ang F5.CZ and H10.N other bump:3.0576 Ang F5.CE2 and M9.C other bump:2.99218 Ang F5.CZ and M9.C other bump:2.74202 Ang S6.N and M9.CE other bump:1.93071 Ang F5.CG and M9.CE other bump:2.74293 Ang F5.CD2 and M9.CE other bump:2.51372 Ang F5.CZ and M9.CE other bump:1.08514 Ang F5.CD1 and M9.CE other bump:1.58421 Ang F5.CE1 and M9.CE other bump:2.74828 Ang F5.CG and M9.SD other bump:3.19275 Ang F5.CD2 and M9.SD other bump:2.8116 Ang F5.CE2 and M9.SD other bump:1.70162 Ang F5.CZ and M9.SD other bump:1.56886 Ang F5.CD1 and M9.SD other bump:0.43463 Ang F5.CE1 and M9.SD other bump:2.68878 Ang F5.CE2 and M9.CG other bump:1.40489 Ang F5.CZ and M9.CG other bump:1.73586 Ang F5.CE1 and M9.CG other bump:2.97084 Ang F5.CD2 and M9.CB other bump:1.91184 Ang F5.CE2 and M9.CB other bump:1.43951 Ang F5.CZ and M9.CB other bump:2.37401 Ang F5.CE1 and M9.CB other bump:2.86443 Ang F5.CE2 and M9.CA other bump:2.70625 Ang F5.CZ and M9.CA other bump:2.11573 Ang G1.O and S4.OG T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=763 Number of alignments=248 # Reading fragments from alignment file # T0191 read from T0191-1a99A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-2track-protein-STR-local-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 5 :KTKVIGL 1a99A 30 :KTLHIYN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues T0191 16 :VEHSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 37 :WSDYIAPDTVANFEKETGIKVVYDVFDS Fragment has 63 clashes (null) has 63 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 30 residues other bump:3.09447 Ang F15.CZ and Y22.C other bump:2.89904 Ang F15.CD2 and Y22.CE2 other bump:2.93264 Ang F15.CG and Y22.CD2 other bump:2.29811 Ang F15.CD2 and Y22.CD2 other bump:1.91288 Ang F15.CE2 and Y22.CD2 other bump:2.30571 Ang F15.CZ and Y22.CD2 other bump:2.22132 Ang H11.CE1 and Y22.CG other bump:2.48312 Ang F15.CE2 and Y22.CG other bump:2.90643 Ang H11.ND1 and Y22.CB other bump:1.61187 Ang H11.CE1 and Y22.CB other bump:1.97413 Ang H11.NE2 and Y22.CB other bump:2.81027 Ang F15.CE1 and Y22.CB other bump:2.60979 Ang F15.CE2 and Y22.CB other bump:1.84125 Ang F15.CZ and Y22.CB other bump:2.89534 Ang H11.NE2 and Y22.CA other bump:2.6286 Ang F15.CE2 and Y22.CA other bump:2.21613 Ang F15.CZ and Y22.CA other bump:1.79891 Ang F15.CE2 and Y22.N other bump:2.0426 Ang F15.CZ and Y22.N other bump:2.49519 Ang F15.CE2 and N21.C other bump:3.236 Ang F15.CZ and N21.C other bump:2.90131 Ang F15.CE2 and N21.CA other bump:3.0095 Ang F15.CD2 and L20.C other bump:3.28467 Ang F15.CE2 and L20.C other bump:1.90272 Ang F15.CD2 and L20.O other bump:2.51584 Ang F15.CE2 and L20.O other bump:2.27138 Ang A13.O and D17.OD2 other bump:2.90917 Ang H11.CD2 and F15.CZ other bump:2.40639 Ang H11.CE1 and F15.CZ other bump:1.99186 Ang H11.NE2 and F15.CZ other bump:2.82281 Ang H11.CG and F15.CE1 other bump:2.0954 Ang H11.CD2 and F15.CE1 other bump:3.02144 Ang H11.ND1 and F15.CE1 other bump:2.52401 Ang H11.CE1 and F15.CE1 other bump:1.87048 Ang H11.NE2 and F15.CE1 other bump:2.77613 Ang F6.CE2 and H11.N other bump:3.23445 Ang F6.CZ and H11.N other bump:3.0576 Ang F6.CE2 and M10.C other bump:2.99218 Ang F6.CZ and M10.C other bump:2.74202 Ang S7.N and M10.CE other bump:1.93071 Ang F6.CG and M10.CE other bump:2.74293 Ang F6.CD2 and M10.CE other bump:2.51372 Ang F6.CZ and M10.CE other bump:1.08514 Ang F6.CD1 and M10.CE other bump:1.58421 Ang F6.CE1 and M10.CE other bump:2.74828 Ang F6.CG and M10.SD other bump:3.19275 Ang F6.CD2 and M10.SD other bump:2.8116 Ang F6.CE2 and M10.SD other bump:1.70162 Ang F6.CZ and M10.SD other bump:1.56886 Ang F6.CD1 and M10.SD other bump:0.43463 Ang F6.CE1 and M10.SD other bump:2.68878 Ang F6.CE2 and M10.CG other bump:1.40489 Ang F6.CZ and M10.CG other bump:1.73586 Ang F6.CE1 and M10.CG other bump:2.97084 Ang F6.CD2 and M10.CB other bump:1.91184 Ang F6.CE2 and M10.CB other bump:1.43951 Ang F6.CZ and M10.CB other bump:2.37401 Ang F6.CE1 and M10.CB other bump:2.86443 Ang F6.CE2 and M10.CA other bump:2.70625 Ang F6.CZ and M10.CA other bump:2.11573 Ang V2.O and S5.OG other bump:2.83282 Ang V2.CG2 and S5.OG other bump:2.78447 Ang V2.CG2 and S5.CB T0191 49 :KYVIDGAKALGIVGFNVTIPHK 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 3 total=766 Number of alignments=249 # Reading fragments from alignment file # T0191 read from T0191-1a99A-local-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-local-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1a99A 41 :IAPDTVANFEKETGIKVVYDVFDS Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.4402 Ang F2.CG and Y20.OH other bump:1.45971 Ang F2.CD2 and Y20.OH other bump:1.54472 Ang F2.CE2 and Y20.OH other bump:2.5369 Ang F2.CZ and Y20.OH other bump:2.76584 Ang F2.CD2 and Y20.CZ other bump:2.73265 Ang F2.CE2 and Y20.CZ other bump:3.09447 Ang F11.CZ and Y18.C other bump:2.89904 Ang F11.CD2 and Y18.CE2 other bump:2.93264 Ang F11.CG and Y18.CD2 other bump:2.29811 Ang F11.CD2 and Y18.CD2 other bump:1.91288 Ang F11.CE2 and Y18.CD2 other bump:2.30571 Ang F11.CZ and Y18.CD2 other bump:2.22132 Ang H7.CE1 and Y18.CG other bump:2.48312 Ang F11.CE2 and Y18.CG other bump:2.90643 Ang H7.ND1 and Y18.CB other bump:1.61187 Ang H7.CE1 and Y18.CB other bump:1.97413 Ang H7.NE2 and Y18.CB other bump:2.81027 Ang F11.CE1 and Y18.CB other bump:2.60979 Ang F11.CE2 and Y18.CB other bump:1.84125 Ang F11.CZ and Y18.CB other bump:2.89534 Ang H7.NE2 and Y18.CA other bump:2.6286 Ang F11.CE2 and Y18.CA other bump:2.21613 Ang F11.CZ and Y18.CA other bump:1.79891 Ang F11.CE2 and Y18.N other bump:2.0426 Ang F11.CZ and Y18.N other bump:2.49519 Ang F11.CE2 and N17.C other bump:3.236 Ang F11.CZ and N17.C other bump:2.90131 Ang F11.CE2 and N17.CA other bump:3.0095 Ang F11.CD2 and L16.C other bump:3.28467 Ang F11.CE2 and L16.C other bump:1.90272 Ang F11.CD2 and L16.O other bump:2.51584 Ang F11.CE2 and L16.O other bump:2.27138 Ang A9.O and D13.OD2 other bump:2.90917 Ang H7.CD2 and F11.CZ other bump:2.40639 Ang H7.CE1 and F11.CZ other bump:1.99186 Ang H7.NE2 and F11.CZ other bump:2.82281 Ang H7.CG and F11.CE1 other bump:2.0954 Ang H7.CD2 and F11.CE1 other bump:3.02144 Ang H7.ND1 and F11.CE1 other bump:2.52401 Ang H7.CE1 and F11.CE1 other bump:1.87048 Ang H7.NE2 and F11.CE1 other bump:2.74202 Ang S3.N and M6.CE T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=768 Number of alignments=250 # Reading fragments from alignment file # T0191 read from T0191-1a99A-local-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-local-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 39 :DYIAPDTVANFEKETGIKVVYDVFDS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.09447 Ang F13.CZ and Y20.C other bump:2.89904 Ang F13.CD2 and Y20.CE2 other bump:2.93264 Ang F13.CG and Y20.CD2 other bump:2.29811 Ang F13.CD2 and Y20.CD2 other bump:1.91288 Ang F13.CE2 and Y20.CD2 other bump:2.30571 Ang F13.CZ and Y20.CD2 other bump:2.22132 Ang H9.CE1 and Y20.CG other bump:2.48312 Ang F13.CE2 and Y20.CG other bump:2.90643 Ang H9.ND1 and Y20.CB other bump:1.61187 Ang H9.CE1 and Y20.CB other bump:1.97413 Ang H9.NE2 and Y20.CB other bump:2.81027 Ang F13.CE1 and Y20.CB other bump:2.60979 Ang F13.CE2 and Y20.CB other bump:1.84125 Ang F13.CZ and Y20.CB other bump:2.89534 Ang H9.NE2 and Y20.CA other bump:2.6286 Ang F13.CE2 and Y20.CA other bump:2.21613 Ang F13.CZ and Y20.CA other bump:1.79891 Ang F13.CE2 and Y20.N other bump:2.0426 Ang F13.CZ and Y20.N other bump:2.49519 Ang F13.CE2 and N19.C other bump:3.236 Ang F13.CZ and N19.C other bump:2.90131 Ang F13.CE2 and N19.CA other bump:3.0095 Ang F13.CD2 and L18.C other bump:3.28467 Ang F13.CE2 and L18.C other bump:1.90272 Ang F13.CD2 and L18.O other bump:2.51584 Ang F13.CE2 and L18.O other bump:2.27138 Ang A11.O and D15.OD2 other bump:2.90917 Ang H9.CD2 and F13.CZ other bump:2.40639 Ang H9.CE1 and F13.CZ other bump:1.99186 Ang H9.NE2 and F13.CZ other bump:2.82281 Ang H9.CG and F13.CE1 other bump:2.0954 Ang H9.CD2 and F13.CE1 other bump:3.02144 Ang H9.ND1 and F13.CE1 other bump:2.52401 Ang H9.CE1 and F13.CE1 other bump:1.87048 Ang H9.NE2 and F13.CE1 other bump:2.77613 Ang F4.CE2 and H9.N other bump:3.23445 Ang F4.CZ and H9.N other bump:3.0576 Ang F4.CE2 and M8.C other bump:2.99218 Ang F4.CZ and M8.C other bump:2.74202 Ang S5.N and M8.CE other bump:1.93071 Ang F4.CG and M8.CE other bump:2.74293 Ang F4.CD2 and M8.CE other bump:2.51372 Ang F4.CZ and M8.CE other bump:1.08514 Ang F4.CD1 and M8.CE other bump:1.58421 Ang F4.CE1 and M8.CE other bump:2.74828 Ang F4.CG and M8.SD other bump:3.19275 Ang F4.CD2 and M8.SD other bump:2.8116 Ang F4.CE2 and M8.SD other bump:1.70162 Ang F4.CZ and M8.SD other bump:1.56886 Ang F4.CD1 and M8.SD other bump:0.43463 Ang F4.CE1 and M8.SD other bump:2.68878 Ang F4.CE2 and M8.CG other bump:1.40489 Ang F4.CZ and M8.CG other bump:1.73586 Ang F4.CE1 and M8.CG other bump:2.97084 Ang F4.CD2 and M8.CB other bump:1.91184 Ang F4.CE2 and M8.CB other bump:1.43951 Ang F4.CZ and M8.CB other bump:2.37401 Ang F4.CE1 and M8.CB other bump:2.86443 Ang F4.CE2 and M8.CA other bump:2.70625 Ang F4.CZ and M8.CA T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=770 Number of alignments=251 # Reading fragments from alignment file # T0191 read from T0191-1a99A-simpleSW-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-simpleSW-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 30 :KDKGLNYVYVAFDV 1a99A 51 :KETGIKVVYDVFDS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 16 residues T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=772 Number of alignments=252 # Reading fragments from alignment file # T0191 read from T0191-1a99A-simpleSW-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-simpleSW-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 29 :FKDKGLNYVYVAFDV 1a99A 50 :EKETGIKVVYDVFDS Fragment has 21 clashes (null) has 21 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 17 residues other bump:3.09449 Ang F2.CZ and Y9.C other bump:2.89902 Ang F2.CD2 and Y9.CE2 other bump:2.93264 Ang F2.CG and Y9.CD2 other bump:2.29809 Ang F2.CD2 and Y9.CD2 other bump:1.91285 Ang F2.CE2 and Y9.CD2 other bump:2.30568 Ang F2.CZ and Y9.CD2 other bump:2.48309 Ang F2.CE2 and Y9.CG other bump:2.81028 Ang F2.CE1 and Y9.CB other bump:2.60978 Ang F2.CE2 and Y9.CB other bump:1.84124 Ang F2.CZ and Y9.CB other bump:2.62858 Ang F2.CE2 and Y9.CA other bump:2.21614 Ang F2.CZ and Y9.CA other bump:1.7989 Ang F2.CE2 and Y9.N other bump:2.04261 Ang F2.CZ and Y9.N other bump:2.49518 Ang F2.CE2 and N8.C other bump:3.23601 Ang F2.CZ and N8.C other bump:2.90131 Ang F2.CE2 and N8.CA other bump:3.00949 Ang F2.CD2 and L7.C other bump:3.28466 Ang F2.CE2 and L7.C other bump:1.9027 Ang F2.CD2 and L7.O other bump:2.51583 Ang F2.CE2 and L7.O T0191 49 :KYVIDGAKALGIVGFNVTIPHK 1a99A 65 :NEVLEGKLMAGSTGFDLVVPSA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 24 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=774 Number of alignments=253 # Reading fragments from alignment file # T0191 read from T0191-1a99A-vit-adpstyle1.pw.a2m.gz # 1a99A read from T0191-1a99A-vit-adpstyle1.pw.a2m.gz # found chain 1a99A in template set T0191 20 :FSPIMHNAAFKDKGLNYVYVAFDV 1a99A 41 :IAPDTVANFEKETGIKVVYDVFDS Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 26 residues other bump:2.4402 Ang F2.CG and Y20.OH other bump:1.45971 Ang F2.CD2 and Y20.OH other bump:1.54472 Ang F2.CE2 and Y20.OH other bump:2.5369 Ang F2.CZ and Y20.OH other bump:2.76584 Ang F2.CD2 and Y20.CZ other bump:2.73265 Ang F2.CE2 and Y20.CZ other bump:3.09447 Ang F11.CZ and Y18.C other bump:2.89904 Ang F11.CD2 and Y18.CE2 other bump:2.93264 Ang F11.CG and Y18.CD2 other bump:2.29811 Ang F11.CD2 and Y18.CD2 other bump:1.91288 Ang F11.CE2 and Y18.CD2 other bump:2.30571 Ang F11.CZ and Y18.CD2 other bump:2.22132 Ang H7.CE1 and Y18.CG other bump:2.48312 Ang F11.CE2 and Y18.CG other bump:2.90643 Ang H7.ND1 and Y18.CB other bump:1.61187 Ang H7.CE1 and Y18.CB other bump:1.97413 Ang H7.NE2 and Y18.CB other bump:2.81027 Ang F11.CE1 and Y18.CB other bump:2.60979 Ang F11.CE2 and Y18.CB other bump:1.84125 Ang F11.CZ and Y18.CB other bump:2.89534 Ang H7.NE2 and Y18.CA other bump:2.6286 Ang F11.CE2 and Y18.CA other bump:2.21613 Ang F11.CZ and Y18.CA other bump:1.79891 Ang F11.CE2 and Y18.N other bump:2.0426 Ang F11.CZ and Y18.N other bump:2.49519 Ang F11.CE2 and N17.C other bump:3.236 Ang F11.CZ and N17.C other bump:2.90131 Ang F11.CE2 and N17.CA other bump:3.0095 Ang F11.CD2 and L16.C other bump:3.28467 Ang F11.CE2 and L16.C other bump:1.90272 Ang F11.CD2 and L16.O other bump:2.51584 Ang F11.CE2 and L16.O other bump:2.27138 Ang A9.O and D13.OD2 other bump:2.90917 Ang H7.CD2 and F11.CZ other bump:2.40639 Ang H7.CE1 and F11.CZ other bump:1.99186 Ang H7.NE2 and F11.CZ other bump:2.82281 Ang H7.CG and F11.CE1 other bump:2.0954 Ang H7.CD2 and F11.CE1 other bump:3.02144 Ang H7.ND1 and F11.CE1 other bump:2.52401 Ang H7.CE1 and F11.CE1 other bump:1.87048 Ang H7.NE2 and F11.CE1 other bump:2.74202 Ang S3.N and M6.CE T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=776 Number of alignments=254 # Reading fragments from alignment file # T0191 read from T0191-1a99A-vit-adpstyle5.pw.a2m.gz # 1a99A read from T0191-1a99A-vit-adpstyle5.pw.a2m.gz # found chain 1a99A in template set T0191 18 :HSFSPIMHNAAFKDKGLNYVYVAFDV 1a99A 39 :DYIAPDTVANFEKETGIKVVYDVFDS Fragment has 60 clashes (null) has 60 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 28 residues other bump:3.09447 Ang F13.CZ and Y20.C other bump:2.89904 Ang F13.CD2 and Y20.CE2 other bump:2.93264 Ang F13.CG and Y20.CD2 other bump:2.29811 Ang F13.CD2 and Y20.CD2 other bump:1.91288 Ang F13.CE2 and Y20.CD2 other bump:2.30571 Ang F13.CZ and Y20.CD2 other bump:2.22132 Ang H9.CE1 and Y20.CG other bump:2.48312 Ang F13.CE2 and Y20.CG other bump:2.90643 Ang H9.ND1 and Y20.CB other bump:1.61187 Ang H9.CE1 and Y20.CB other bump:1.97413 Ang H9.NE2 and Y20.CB other bump:2.81027 Ang F13.CE1 and Y20.CB other bump:2.60979 Ang F13.CE2 and Y20.CB other bump:1.84125 Ang F13.CZ and Y20.CB other bump:2.89534 Ang H9.NE2 and Y20.CA other bump:2.6286 Ang F13.CE2 and Y20.CA other bump:2.21613 Ang F13.CZ and Y20.CA other bump:1.79891 Ang F13.CE2 and Y20.N other bump:2.0426 Ang F13.CZ and Y20.N other bump:2.49519 Ang F13.CE2 and N19.C other bump:3.236 Ang F13.CZ and N19.C other bump:2.90131 Ang F13.CE2 and N19.CA other bump:3.0095 Ang F13.CD2 and L18.C other bump:3.28467 Ang F13.CE2 and L18.C other bump:1.90272 Ang F13.CD2 and L18.O other bump:2.51584 Ang F13.CE2 and L18.O other bump:2.27138 Ang A11.O and D15.OD2 other bump:2.90917 Ang H9.CD2 and F13.CZ other bump:2.40639 Ang H9.CE1 and F13.CZ other bump:1.99186 Ang H9.NE2 and F13.CZ other bump:2.82281 Ang H9.CG and F13.CE1 other bump:2.0954 Ang H9.CD2 and F13.CE1 other bump:3.02144 Ang H9.ND1 and F13.CE1 other bump:2.52401 Ang H9.CE1 and F13.CE1 other bump:1.87048 Ang H9.NE2 and F13.CE1 other bump:2.77613 Ang F4.CE2 and H9.N other bump:3.23445 Ang F4.CZ and H9.N other bump:3.0576 Ang F4.CE2 and M8.C other bump:2.99218 Ang F4.CZ and M8.C other bump:2.74202 Ang S5.N and M8.CE other bump:1.93071 Ang F4.CG and M8.CE other bump:2.74293 Ang F4.CD2 and M8.CE other bump:2.51372 Ang F4.CZ and M8.CE other bump:1.08514 Ang F4.CD1 and M8.CE other bump:1.58421 Ang F4.CE1 and M8.CE other bump:2.74828 Ang F4.CG and M8.SD other bump:3.19275 Ang F4.CD2 and M8.SD other bump:2.8116 Ang F4.CE2 and M8.SD other bump:1.70162 Ang F4.CZ and M8.SD other bump:1.56886 Ang F4.CD1 and M8.SD other bump:0.43463 Ang F4.CE1 and M8.SD other bump:2.68878 Ang F4.CE2 and M8.CG other bump:1.40489 Ang F4.CZ and M8.CG other bump:1.73586 Ang F4.CE1 and M8.CG other bump:2.97084 Ang F4.CD2 and M8.CB other bump:1.91184 Ang F4.CE2 and M8.CB other bump:1.43951 Ang F4.CZ and M8.CB other bump:2.37401 Ang F4.CE1 and M8.CB other bump:2.86443 Ang F4.CE2 and M8.CA other bump:2.70625 Ang F4.CZ and M8.CA T0191 49 :KYVIDGAKALGIVGFNVTIP 1a99A 65 :NEVLEGKLMAGSTGFDLVVP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 22 residues other bump:2.60793 Ang V14.CG1 and F16.CE2 other bump:2.10185 Ang V14.CG1 and F16.CD2 other bump:2.94151 Ang V14.CG1 and F16.CG Number of specific fragments= 2 total=778 Number of alignments=255 # command:# Prefix for input files set to # command:# Prefix for input files set to decoys/ # command:# Reading conformation from PDB file T0191.try1-opt-scwrl.pdb # command:# naming current conformation T0191.try5-try1-s # command:# Reading conformation from PDB file T0191.try3-opt-scwrl.pdb # command:# naming current conformation T0191.try5-try3-s # command:# Reading conformation from PDB file T0191.try3-opt.pdb Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # command:# naming current conformation T0191.try5-try3 # command:# Prefix for input files set to # command:CPU_time= 56870 msec, elapsed time= 60391.9 msec) # command:# Will now start reporting costs to decoys/undertaker-try5.rdb # command:# CostConform T0191.try5-try3 costs 73.3958 T0191.try5-try3-s costs 73.8807 T0191.try5-try1-s costs 75.2059 T0191.rand costs 407.368 # command:CPU_time= 57100 msec, elapsed time= 60629.2 msec) # command:# Prefix for input files set to # command:# Reading fragments from alignment file # T0191 read from T0191.t2k.frag # 5ukdA.1.1 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 1 :MINAKTKVI 5ukdA 2 :EKSKPNVVF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=779 # 1qf9A.1.1 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 1 :MINAKTKVI 1qf9A 2 :EKSKPNVVF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=780 # 5ukdA.1.0 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 1 :MINAKTKVI 5ukdA 1 :MEKSKPNVV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=781 # 1qf9A.1.0 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 1 :MINAKTKVI 1qf9A 1 :MEKSKPNVV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=782 # 1qfcA.1.0 read from T0191.t2k.frag # found chain 1qfcA in template set T0191 1 :MINAKTKVI 1qfcA 1 :TAPASTLRF Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues neighbor-bump: 2.77795 Ang V8.C and I9.CG2 neighbor-bump: 2.02299 Ang V8.O and I9.CG2 Number of specific fragments= 1 total=783 # 1c0pA.1.1 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 1 :MINAKTKVI 1c0pA 1000 :MMHSQKRVV Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues self-bump: 2.53231 Ang M1.CB and M1.SD Number of specific fragments= 1 total=784 # 1qf9A.2.2 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 2 :INAKTKVIG 1qf9A 3 :KSKPNVVFV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=785 # 5ukdA.2.2 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 2 :INAKTKVIG 5ukdA 3 :KSKPNVVFV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=786 # 1c0pA.2.2 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 2 :INAKTKVIG 1c0pA 1001 :MHSQKRVVV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=787 # 2ak3A.2.2 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 2 :INAKTKVIG 2ak3A 2 :SARLLRAAI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.41627 Ang T6.CG2 and V8.CG2 Number of specific fragments= 1 total=788 # 1qfcA.2.2 read from T0191.t2k.frag # found chain 1qfcA in template set T0191 2 :INAKTKVIG 1qfcA 3 :PASTLRFVA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.09761 Ang K7.O and V8.CG1 neighbor-bump: 2.86202 Ang K7.C and V8.CG1 Number of specific fragments= 1 total=789 # 5ukdA.2.1 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 2 :INAKTKVIG 5ukdA 2 :EKSKPNVVF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=790 # 1qf9A.3.3 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 3 :NAKTKVIGL 1qf9A 4 :SKPNVVFVL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=791 # 5ukdA.3.3 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 3 :NAKTKVIGL 5ukdA 4 :SKPNVVFVL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=792 # 1c0pA.3.3 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 3 :NAKTKVIGL 1c0pA 1002 :HSQKRVVVL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=793 # 2ak3A.3.3 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 3 :NAKTKVIGL 2ak3A 3 :ARLLRAAIM Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.41627 Ang T5.CG2 and V7.CG2 Number of specific fragments= 1 total=794 # 5ukdA.3.2 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 3 :NAKTKVIGL 5ukdA 3 :KSKPNVVFV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=795 # 1qf9A.3.2 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 3 :NAKTKVIGL 1qf9A 3 :KSKPNVVFV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=796 # 5ukdA.4.4 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 4 :AKTKVIGLI 5ukdA 5 :KPNVVFVLG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.74884 Ang L9.C and I10.CG2 neighbor-bump: 1.89226 Ang L9.O and I10.CG2 Number of specific fragments= 1 total=797 # 1qf9A.4.4 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 4 :AKTKVIGLI 1qf9A 5 :KPNVVFVLG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.70703 Ang L9.C and I10.CG2 neighbor-bump: 1.85874 Ang L9.O and I10.CG2 Number of specific fragments= 1 total=798 # 1c0pA.4.4 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 4 :AKTKVIGLI 1c0pA 1003 :SQKRVVVLG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.00297 Ang L9.O and I10.CG2 neighbor-bump: 2.78738 Ang L9.C and I10.CG2 Number of specific fragments= 1 total=799 # 5ukdA.4.3 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 4 :AKTKVIGLI 5ukdA 4 :SKPNVVFVL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.69729 Ang I10.CG2 and G11.N Number of specific fragments= 1 total=800 # 1qf9A.4.3 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 4 :AKTKVIGLI 1qf9A 4 :SKPNVVFVL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.66099 Ang I10.CG2 and G11.N Number of specific fragments= 1 total=801 # 2ak3A.4.4 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 4 :AKTKVIGLI 2ak3A 4 :RLLRAAIMG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.01175 Ang L9.O and I10.CG1 neighbor-bump: 2.74702 Ang L9.C and I10.CG1 other bump:2.41627 Ang T4.CG2 and V6.CG2 Number of specific fragments= 1 total=802 # 5ukdA.5.5 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 5 :KTKVIGLIG 5ukdA 6 :PNVVFVLGG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.84062 Ang L8.C and I9.CG2 neighbor-bump: 2.0026 Ang L8.O and I9.CG2 Number of specific fragments= 1 total=803 # 1qf9A.5.5 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 5 :KTKVIGLIG 1qf9A 6 :PNVVFVLGG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.79959 Ang L8.C and I9.CG2 neighbor-bump: 1.96874 Ang L8.O and I9.CG2 Number of specific fragments= 1 total=804 # 1c0pA.5.5 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 5 :KTKVIGLIG 1c0pA 1004 :QKRVVVLGS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.00299 Ang L8.O and I9.CG2 neighbor-bump: 2.7874 Ang L8.C and I9.CG2 Number of specific fragments= 1 total=805 # 5ukdA.5.4 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 5 :KTKVIGLIG 5ukdA 5 :KPNVVFVLG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.69673 Ang I9.CG2 and G10.N Number of specific fragments= 1 total=806 # 1qf9A.5.4 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 5 :KTKVIGLIG 1qf9A 5 :KPNVVFVLG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.65718 Ang I9.CG2 and G10.N Number of specific fragments= 1 total=807 # 2ak3A.5.5 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 5 :KTKVIGLIG 2ak3A 5 :LLRAAIMGA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.82218 Ang L8.O and I9.CG2 neighbor-bump: 2.7004 Ang L8.C and I9.CG2 other bump:2.41627 Ang T3.CG2 and V5.CG2 Number of specific fragments= 1 total=808 # 5ukdA.6.6 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 6 :TKVIGLIGH 5ukdA 7 :NVVFVLGGP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.0026 Ang L7.O and I8.CG2 neighbor-bump: 2.84062 Ang L7.C and I8.CG2 Number of specific fragments= 1 total=809 # 1qf9A.6.6 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 6 :TKVIGLIGH 1qf9A 7 :NVVFVLGGP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.96874 Ang L7.O and I8.CG2 neighbor-bump: 2.79959 Ang L7.C and I8.CG2 Number of specific fragments= 1 total=810 # 1c0pA.6.6 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 6 :TKVIGLIGH 1c0pA 1005 :KRVVVLGSG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.7874 Ang L7.C and I8.CG2 neighbor-bump: 2.00299 Ang L7.O and I8.CG2 Number of specific fragments= 1 total=811 # 5ukdA.6.5 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 6 :TKVIGLIGH 5ukdA 6 :PNVVFVLGG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.76732 Ang H10.CD2 and G11.N neighbor-bump: 2.69673 Ang I8.CG2 and G9.N Number of specific fragments= 1 total=812 # 1qf9A.6.5 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 6 :TKVIGLIGH 1qf9A 6 :PNVVFVLGG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.74308 Ang H10.CD2 and G11.N neighbor-bump: 2.65718 Ang I8.CG2 and G9.N Number of specific fragments= 1 total=813 # 2ak3A.6.6 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 6 :TKVIGLIGH 2ak3A 6 :LRAAIMGAP Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.82218 Ang L7.O and I8.CG2 neighbor-bump: 2.7004 Ang L7.C and I8.CG2 other bump:2.41627 Ang T2.CG2 and V4.CG2 Number of specific fragments= 1 total=814 # 1qf9A.7.7 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 7 :KVIGLIGHP 1qf9A 8 :VVFVLGGPG Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.18224 Ang H9.O and P10.CD neighbor-bump: 2.23705 Ang H9.CB and P10.CD neighbor-bump: 1.67073 Ang H9.CA and P10.CD neighbor-bump: 1.12748 Ang H9.C and P10.CD self-bump: 1.26659 Ang P10.N and P10.CD neighbor-bump: 2.38824 Ang H9.O and P10.CG neighbor-bump: 2.94737 Ang H9.CB and P10.CG neighbor-bump: 2.93307 Ang H9.CA and P10.CG neighbor-bump: 2.05162 Ang H9.C and P10.CG self-bump: 2.11992 Ang P10.N and P10.CG neighbor-bump: 2.13384 Ang H9.O and P10.CB neighbor-bump: 2.3081 Ang H9.C and P10.CB neighbor-bump: 1.96874 Ang L6.O and I7.CG2 neighbor-bump: 2.79959 Ang L6.C and I7.CG2 Number of specific fragments= 1 total=815 # 5ukdA.7.7 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 7 :KVIGLIGHP 5ukdA 8 :VVFVLGGPG Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.05922 Ang H9.O and P10.CD neighbor-bump: 1.60675 Ang H9.CA and P10.CD neighbor-bump: 2.18446 Ang H9.CB and P10.CD neighbor-bump: 1.00384 Ang H9.C and P10.CD self-bump: 1.28773 Ang P10.N and P10.CD neighbor-bump: 2.17841 Ang H9.O and P10.CG neighbor-bump: 2.88873 Ang H9.CA and P10.CG neighbor-bump: 2.92761 Ang H9.CB and P10.CG neighbor-bump: 1.93034 Ang H9.C and P10.CG self-bump: 2.13785 Ang P10.N and P10.CG neighbor-bump: 2.03433 Ang H9.O and P10.CB neighbor-bump: 2.26269 Ang H9.C and P10.CB neighbor-bump: 2.0026 Ang L6.O and I7.CG2 neighbor-bump: 2.84062 Ang L6.C and I7.CG2 Number of specific fragments= 1 total=816 # 1c0pA.7.7 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 7 :KVIGLIGHP 1c0pA 1006 :RVVVLGSGV Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.77433 Ang H9.ND1 and P10.CD neighbor-bump: 2.00299 Ang L6.O and I7.CG2 neighbor-bump: 2.7874 Ang L6.C and I7.CG2 Number of specific fragments= 1 total=817 # 5ukdA.7.6 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 7 :KVIGLIGHP 5ukdA 7 :NVVFVLGGP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.69673 Ang I7.CG2 and G8.N Number of specific fragments= 1 total=818 # 1qf9A.7.6 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 7 :KVIGLIGHP 1qf9A 7 :NVVFVLGGP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.65718 Ang I7.CG2 and G8.N Number of specific fragments= 1 total=819 # 1dg9A.7.7 read from T0191.t2k.frag # found chain 1dg9A in template set T0191 7 :KVIGLIGHP 1dg9A 8 :VLFVCLGNI Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.43607 Ang H9.CA and P10.CD neighbor-bump: 1.88933 Ang H9.C and P10.CD other bump:2.90459 Ang G8.CA and P10.CD other bump:2.04204 Ang G8.O and P10.CD other bump:1.92025 Ang G8.C and P10.CD neighbor-bump: 2.14094 Ang H9.N and P10.CD other bump:2.51663 Ang G8.O and P10.CG other bump:2.92196 Ang G8.C and P10.CG Number of specific fragments= 1 total=820 # 1qf9A.8.8 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 8 :VIGLIGHPV 1qf9A 9 :VFVLGGPGS Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.01122 Ang G7.CA and V10.CG2 other bump:3.02499 Ang G7.C and V10.CG2 other bump:2.74146 Ang G7.N and V10.CG2 other bump:2.79316 Ang I6.CB and V10.CG1 other bump:3.1184 Ang I6.CG2 and V10.CG1 other bump:3.13195 Ang I6.CB and V10.CB neighbor-bump: 1.67073 Ang H8.CA and P9.CD neighbor-bump: 2.18224 Ang H8.O and P9.CD neighbor-bump: 1.12748 Ang H8.C and P9.CD self-bump: 1.26659 Ang P9.N and P9.CD neighbor-bump: 2.23705 Ang H8.CB and P9.CD neighbor-bump: 2.93307 Ang H8.CA and P9.CG neighbor-bump: 2.38823 Ang H8.O and P9.CG neighbor-bump: 2.05162 Ang H8.C and P9.CG self-bump: 2.11993 Ang P9.N and P9.CG neighbor-bump: 2.94737 Ang H8.CB and P9.CG neighbor-bump: 2.13383 Ang H8.O and P9.CB neighbor-bump: 2.3081 Ang H8.C and P9.CB neighbor-bump: 2.79959 Ang L5.C and I6.CG2 neighbor-bump: 1.96874 Ang L5.O and I6.CG2 Number of specific fragments= 1 total=821 # 5ukdA.8.8 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 8 :VIGLIGHPV 5ukdA 9 :VFVLGGPGS Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.05221 Ang G7.CA and V10.CG2 other bump:3.01041 Ang G7.C and V10.CG2 other bump:2.76282 Ang G7.N and V10.CG2 other bump:2.72602 Ang I6.CB and V10.CG1 other bump:3.15842 Ang I6.CG1 and V10.CG1 other bump:3.1348 Ang I6.CG2 and V10.CG1 other bump:3 Ang I6.CD1 and V10.CG1 other bump:3.16277 Ang I6.CB and V10.CB other bump:3.13428 Ang I6.CD1 and V10.CB neighbor-bump: 1.60675 Ang H8.CA and P9.CD neighbor-bump: 2.05923 Ang H8.O and P9.CD neighbor-bump: 1.00385 Ang H8.C and P9.CD self-bump: 1.28773 Ang P9.N and P9.CD neighbor-bump: 2.18446 Ang H8.CB and P9.CD neighbor-bump: 2.88873 Ang H8.CA and P9.CG neighbor-bump: 2.17841 Ang H8.O and P9.CG neighbor-bump: 1.93034 Ang H8.C and P9.CG self-bump: 2.13785 Ang P9.N and P9.CG neighbor-bump: 2.92761 Ang H8.CB and P9.CG neighbor-bump: 2.03432 Ang H8.O and P9.CB neighbor-bump: 2.26269 Ang H8.C and P9.CB neighbor-bump: 2.84062 Ang L5.C and I6.CG2 neighbor-bump: 2.0026 Ang L5.O and I6.CG2 Number of specific fragments= 1 total=822 # 1c0pA.8.8 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 8 :VIGLIGHPV 1c0pA 1007 :VVVLGSGVI Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.56411 Ang H8.CG and P9.CD neighbor-bump: 1.7019 Ang H8.ND1 and P9.CD neighbor-bump: 2.00299 Ang L5.O and I6.CG2 neighbor-bump: 2.7874 Ang L5.C and I6.CG2 Number of specific fragments= 1 total=823 # 2ak3A.8.8 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 8 :VIGLIGHPV 2ak3A 8 :AAIMGAPGS Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.49319 Ang G7.O and V10.CG2 other bump:2.99096 Ang G7.CA and V10.CG2 other bump:3.0058 Ang G7.C and V10.CG2 other bump:2.80238 Ang G7.N and V10.CG2 other bump:3.05545 Ang I6.CD1 and V10.CG1 other bump:2.75009 Ang I6.CB and V10.CG1 neighbor-bump: 1.75384 Ang H8.CA and P9.CD neighbor-bump: 1.9271 Ang H8.O and P9.CD neighbor-bump: 0.97962 Ang H8.C and P9.CD self-bump: 1.35865 Ang P9.N and P9.CD neighbor-bump: 2.1158 Ang H8.CB and P9.CD neighbor-bump: 3.13096 Ang H8.CA and P9.CG neighbor-bump: 2.17058 Ang H8.O and P9.CG neighbor-bump: 2.05536 Ang H8.C and P9.CG self-bump: 2.2029 Ang P9.N and P9.CG neighbor-bump: 3.06001 Ang H8.CB and P9.CG neighbor-bump: 2.12903 Ang H8.O and P9.CB neighbor-bump: 2.4064 Ang H8.C and P9.CB neighbor-bump: 1.82218 Ang L5.O and I6.CG2 neighbor-bump: 2.7004 Ang L5.C and I6.CG2 Number of specific fragments= 1 total=824 # 1dg9A.8.8 read from T0191.t2k.frag # found chain 1dg9A in template set T0191 8 :VIGLIGHPV 1dg9A 9 :LFVCLGNIC Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.65266 Ang L5.CD1 and G11.CA other bump:2.68999 Ang L5.CD1 and G11.N neighbor-bump: 1.88932 Ang H8.C and P9.CD neighbor-bump: 2.43607 Ang H8.CA and P9.CD other bump:2.90458 Ang G7.CA and P9.CD neighbor-bump: 2.14094 Ang H8.N and P9.CD other bump:2.04204 Ang G7.O and P9.CD other bump:1.92024 Ang G7.C and P9.CD other bump:2.51663 Ang G7.O and P9.CG other bump:2.92195 Ang G7.C and P9.CG Number of specific fragments= 1 total=825 # 5ukdA.8.7 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 8 :VIGLIGHPV 5ukdA 8 :VVFVLGGPG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.17492 Ang P9.O and V10.CB neighbor-bump: 2.43784 Ang P9.C and V10.CB neighbor-bump: 2.69673 Ang I6.CG2 and G7.N Number of specific fragments= 1 total=826 # 5ukdA.9.9 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 9 :IGLIGHPVE 5ukdA 10 :FVLGGPGSG Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.47615 Ang V9.O and E10.CG neighbor-bump: 2.83928 Ang V9.C and E10.CG other bump:3.01043 Ang G6.C and V9.CG2 other bump:2.76283 Ang G6.N and V9.CG2 other bump:3.05222 Ang G6.CA and V9.CG2 other bump:2.72603 Ang I5.CB and V9.CG1 other bump:3.1348 Ang I5.CG2 and V9.CG1 other bump:3.15843 Ang I5.CG1 and V9.CG1 other bump:3.00001 Ang I5.CD1 and V9.CG1 other bump:3.16276 Ang I5.CB and V9.CB other bump:3.13428 Ang I5.CD1 and V9.CB neighbor-bump: 2.05923 Ang H7.O and P8.CD neighbor-bump: 1.00385 Ang H7.C and P8.CD self-bump: 1.28773 Ang P8.N and P8.CD neighbor-bump: 1.60675 Ang H7.CA and P8.CD neighbor-bump: 2.18446 Ang H7.CB and P8.CD neighbor-bump: 2.17841 Ang H7.O and P8.CG neighbor-bump: 1.93034 Ang H7.C and P8.CG self-bump: 2.13785 Ang P8.N and P8.CG neighbor-bump: 2.88873 Ang H7.CA and P8.CG neighbor-bump: 2.92761 Ang H7.CB and P8.CG neighbor-bump: 2.03432 Ang H7.O and P8.CB neighbor-bump: 2.26269 Ang H7.C and P8.CB neighbor-bump: 2.0026 Ang L4.O and I5.CG2 neighbor-bump: 2.84062 Ang L4.C and I5.CG2 Number of specific fragments= 1 total=827 # 1qf9A.9.9 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 9 :IGLIGHPVE 1qf9A 10 :FVLGGPGSG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.52449 Ang V9.O and E10.CG neighbor-bump: 2.85243 Ang V9.C and E10.CG other bump:3.02499 Ang G6.C and V9.CG2 other bump:2.74146 Ang G6.N and V9.CG2 other bump:3.01122 Ang G6.CA and V9.CG2 other bump:2.79317 Ang I5.CB and V9.CG1 other bump:3.11841 Ang I5.CG2 and V9.CG1 other bump:3.13196 Ang I5.CB and V9.CB neighbor-bump: 2.18224 Ang H7.O and P8.CD neighbor-bump: 1.12748 Ang H7.C and P8.CD self-bump: 1.26659 Ang P8.N and P8.CD neighbor-bump: 1.67073 Ang H7.CA and P8.CD neighbor-bump: 2.23705 Ang H7.CB and P8.CD neighbor-bump: 2.38823 Ang H7.O and P8.CG neighbor-bump: 2.05162 Ang H7.C and P8.CG self-bump: 2.11993 Ang P8.N and P8.CG neighbor-bump: 2.93307 Ang H7.CA and P8.CG neighbor-bump: 2.94737 Ang H7.CB and P8.CG neighbor-bump: 2.13383 Ang H7.O and P8.CB neighbor-bump: 2.3081 Ang H7.C and P8.CB neighbor-bump: 1.96874 Ang L4.O and I5.CG2 neighbor-bump: 2.79959 Ang L4.C and I5.CG2 Number of specific fragments= 1 total=828 # 1c0pA.9.9 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 9 :IGLIGHPVE 1c0pA 1008 :VVLGSGVIG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.91006 Ang G3.O and E10.OE2 other bump:2.01801 Ang G3.C and E10.OE2 other bump:1.32325 Ang I5.O and E10.OE1 other bump:1.24972 Ang I5.C and E10.OE1 other bump:2.34632 Ang L4.C and E10.OE1 other bump:2.41874 Ang I5.CB and E10.OE1 other bump:2.63293 Ang I5.CG2 and E10.OE1 other bump:1.55531 Ang I5.N and E10.OE1 other bump:1.38173 Ang I5.CA and E10.OE1 other bump:1.28824 Ang I5.O and E10.CD other bump:2.12665 Ang I5.C and E10.CD other bump:3.15854 Ang G3.C and E10.CD other bump:2.78144 Ang L4.C and E10.CD other bump:2.39023 Ang I5.N and E10.CD other bump:2.62434 Ang I5.CA and E10.CD other bump:1.56614 Ang I5.O and E10.CG other bump:2.74128 Ang I5.C and E10.CG other bump:1.99176 Ang I5.O and E10.CB other bump:2.72517 Ang I5.C and E10.CB neighbor-bump: 2.56411 Ang H7.CG and P8.CD neighbor-bump: 1.7019 Ang H7.ND1 and P8.CD neighbor-bump: 2.7874 Ang L4.C and I5.CG2 neighbor-bump: 2.00299 Ang L4.O and I5.CG2 Number of specific fragments= 1 total=829 # 2ak3A.9.9 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 9 :IGLIGHPVE 2ak3A 9 :AIMGAPGSG Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.23158 Ang I5.CD1 and G11.CA other bump:3.30291 Ang I5.CG1 and G11.CA other bump:2.42475 Ang I5.CD1 and G11.N other bump:2.80239 Ang G6.N and V9.CG2 other bump:2.99097 Ang G6.CA and V9.CG2 other bump:2.4932 Ang G6.O and V9.CG2 other bump:3.0058 Ang G6.C and V9.CG2 other bump:3.05545 Ang I5.CD1 and V9.CG1 other bump:2.75009 Ang I5.CB and V9.CG1 neighbor-bump: 1.75384 Ang H7.CA and P8.CD neighbor-bump: 1.9271 Ang H7.O and P8.CD neighbor-bump: 0.97962 Ang H7.C and P8.CD self-bump: 1.35865 Ang P8.N and P8.CD neighbor-bump: 2.1158 Ang H7.CB and P8.CD neighbor-bump: 3.13096 Ang H7.CA and P8.CG neighbor-bump: 2.17058 Ang H7.O and P8.CG neighbor-bump: 2.05536 Ang H7.C and P8.CG self-bump: 2.2029 Ang P8.N and P8.CG neighbor-bump: 3.06001 Ang H7.CB and P8.CG neighbor-bump: 2.12903 Ang H7.O and P8.CB neighbor-bump: 2.4064 Ang H7.C and P8.CB neighbor-bump: 1.82218 Ang L4.O and I5.CG2 neighbor-bump: 2.7004 Ang L4.C and I5.CG2 Number of specific fragments= 1 total=830 # 5ukdA.9.8 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 9 :IGLIGHPVE 5ukdA 9 :VFVLGGPGS Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.29993 Ang G6.C and E10.OE2 other bump:2.156 Ang G6.N and E10.OE2 other bump:2.46854 Ang I5.C and E10.OE2 other bump:1.67665 Ang G6.CA and E10.OE2 other bump:2.27668 Ang H7.N and E10.OE1 other bump:2.30584 Ang G6.C and E10.OE1 other bump:1.83789 Ang G6.CA and E10.OE1 other bump:2.70302 Ang H7.N and E10.CD other bump:2.29635 Ang G6.C and E10.CD other bump:1.93544 Ang G6.CA and E10.CD neighbor-bump: 2.17492 Ang P8.O and V9.CB neighbor-bump: 2.43784 Ang P8.C and V9.CB neighbor-bump: 2.69673 Ang I5.CG2 and G6.N Number of specific fragments= 1 total=831 # 1qf9A.9.8 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 9 :IGLIGHPVE 1qf9A 9 :VFVLGGPGS Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.38721 Ang G6.C and E10.OE2 other bump:2.18682 Ang G6.N and E10.OE2 other bump:2.45141 Ang I5.C and E10.OE2 other bump:1.59248 Ang G6.CA and E10.OE2 other bump:2.40202 Ang G6.C and E10.OE1 other bump:2.31985 Ang H7.N and E10.OE1 other bump:1.88612 Ang G6.CA and E10.OE1 other bump:2.38376 Ang G6.C and E10.CD other bump:2.73317 Ang H7.N and E10.CD other bump:1.89788 Ang G6.CA and E10.CD neighbor-bump: 2.26898 Ang P8.O and V9.CB neighbor-bump: 2.48128 Ang P8.C and V9.CB neighbor-bump: 2.65718 Ang I5.CG2 and G6.N Number of specific fragments= 1 total=832 # 5ukdA.10.10 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 10 :GLIGHPVEH 5ukdA 11 :VLGGPGSGK Fragment has 47 clashes (null) has 47 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.01039 Ang I4.CB and H10.NE2 other bump:2.80527 Ang I4.CA and H10.NE2 other bump:1.46262 Ang I4.CG1 and H10.NE2 other bump:2.12012 Ang I4.CD1 and H10.NE2 other bump:1.84991 Ang L3.O and H10.NE2 other bump:2.22045 Ang I4.CG2 and H10.NE2 other bump:2.15644 Ang L3.C and H10.NE2 other bump:2.7216 Ang I4.CG1 and H10.CE1 other bump:1.87489 Ang L3.O and H10.CE1 other bump:2.40235 Ang L3.N and H10.CE1 other bump:2.61594 Ang L3.CA and H10.CE1 other bump:2.20138 Ang L3.C and H10.CE1 other bump:2.82701 Ang G2.C and H10.CE1 other bump:3.18868 Ang I4.CG1 and H10.ND1 other bump:3.10457 Ang I4.CD1 and H10.ND1 other bump:2.90079 Ang G2.C and H10.ND1 other bump:2.57689 Ang I4.CB and H10.CD2 other bump:1.22112 Ang I4.CG1 and H10.CD2 other bump:1.18693 Ang I4.CD1 and H10.CD2 other bump:2.55423 Ang I4.CG1 and H10.CG other bump:2.16965 Ang I4.CD1 and H10.CG other bump:3.08554 Ang I4.CD1 and H10.CB neighbor-bump: 2.47615 Ang V8.O and E9.CG neighbor-bump: 2.83928 Ang V8.C and E9.CG other bump:3.05222 Ang G5.CA and V8.CG2 other bump:3.01043 Ang G5.C and V8.CG2 other bump:2.76283 Ang G5.N and V8.CG2 other bump:2.72603 Ang I4.CB and V8.CG1 other bump:3.15843 Ang I4.CG1 and V8.CG1 other bump:3.00001 Ang I4.CD1 and V8.CG1 other bump:3.1348 Ang I4.CG2 and V8.CG1 other bump:3.16276 Ang I4.CB and V8.CB other bump:3.13428 Ang I4.CD1 and V8.CB neighbor-bump: 2.05923 Ang H6.O and P7.CD neighbor-bump: 1.00385 Ang H6.C and P7.CD self-bump: 1.28773 Ang P7.N and P7.CD neighbor-bump: 1.60675 Ang H6.CA and P7.CD neighbor-bump: 2.18446 Ang H6.CB and P7.CD neighbor-bump: 2.17841 Ang H6.O and P7.CG neighbor-bump: 1.93034 Ang H6.C and P7.CG self-bump: 2.13785 Ang P7.N and P7.CG neighbor-bump: 2.88873 Ang H6.CA and P7.CG neighbor-bump: 2.92761 Ang H6.CB and P7.CG neighbor-bump: 2.03432 Ang H6.O and P7.CB neighbor-bump: 2.26269 Ang H6.C and P7.CB neighbor-bump: 2.0026 Ang L3.O and I4.CG2 neighbor-bump: 2.84062 Ang L3.C and I4.CG2 Number of specific fragments= 1 total=833 # 1qf9A.10.10 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 10 :GLIGHPVEH 1qf9A 11 :VLGGPGSGK Fragment has 46 clashes (null) has 46 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.91033 Ang I4.CB and H10.NE2 other bump:2.79315 Ang I4.CA and H10.NE2 other bump:1.48523 Ang I4.CG1 and H10.NE2 other bump:2.05397 Ang I4.CD1 and H10.NE2 other bump:1.89069 Ang L3.O and H10.NE2 other bump:2.00449 Ang I4.CG2 and H10.NE2 other bump:2.2191 Ang L3.C and H10.NE2 other bump:2.71282 Ang I4.CG1 and H10.CE1 other bump:2.97502 Ang I4.CD1 and H10.CE1 other bump:1.87558 Ang L3.O and H10.CE1 other bump:2.8517 Ang I4.CG2 and H10.CE1 other bump:2.42991 Ang L3.N and H10.CE1 other bump:2.64058 Ang L3.CA and H10.CE1 other bump:2.25712 Ang L3.C and H10.CE1 other bump:2.86454 Ang G2.C and H10.CE1 other bump:3.15675 Ang I4.CG1 and H10.ND1 other bump:2.93745 Ang I4.CD1 and H10.ND1 other bump:2.88652 Ang G2.C and H10.ND1 other bump:2.47406 Ang I4.CB and H10.CD2 other bump:1.21763 Ang I4.CG1 and H10.CD2 other bump:0.945016 Ang I4.CD1 and H10.CD2 other bump:2.51781 Ang I4.CG1 and H10.CG other bump:1.92922 Ang I4.CD1 and H10.CG other bump:2.84156 Ang I4.CD1 and H10.CB neighbor-bump: 2.52447 Ang V8.O and E9.CG neighbor-bump: 2.85242 Ang V8.C and E9.CG other bump:3.01122 Ang G5.CA and V8.CG2 other bump:3.02499 Ang G5.C and V8.CG2 other bump:2.74146 Ang G5.N and V8.CG2 other bump:2.79317 Ang I4.CB and V8.CG1 other bump:3.11841 Ang I4.CG2 and V8.CG1 other bump:3.13196 Ang I4.CB and V8.CB neighbor-bump: 2.18224 Ang H6.O and P7.CD neighbor-bump: 1.12748 Ang H6.C and P7.CD self-bump: 1.26659 Ang P7.N and P7.CD neighbor-bump: 2.23705 Ang H6.CB and P7.CD neighbor-bump: 1.67073 Ang H6.CA and P7.CD neighbor-bump: 2.38823 Ang H6.O and P7.CG neighbor-bump: 2.05162 Ang H6.C and P7.CG self-bump: 2.11993 Ang P7.N and P7.CG neighbor-bump: 2.94737 Ang H6.CB and P7.CG neighbor-bump: 2.93307 Ang H6.CA and P7.CG neighbor-bump: 2.13383 Ang H6.O and P7.CB neighbor-bump: 2.3081 Ang H6.C and P7.CB neighbor-bump: 1.96874 Ang L3.O and I4.CG2 neighbor-bump: 2.79959 Ang L3.C and I4.CG2 Number of specific fragments= 1 total=834 # 1c0pA.10.10 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 10 :GLIGHPVEH 1c0pA 1009 :VLGSGVIGL Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.5127 Ang G5.O and H10.CD2 other bump:3.13277 Ang G5.CA and H10.CD2 other bump:2.85745 Ang G5.C and H10.CD2 other bump:2.21401 Ang I4.O and E9.OE1 other bump:1.73191 Ang I4.O and E9.CD other bump:2.90296 Ang I4.C and E9.CD other bump:1.43545 Ang I4.O and E9.CG other bump:2.5641 Ang I4.C and E9.CG other bump:2.04519 Ang I4.O and E9.CB other bump:2.74247 Ang I4.C and E9.CB neighbor-bump: 2.56411 Ang H6.CG and P7.CD neighbor-bump: 1.7019 Ang H6.ND1 and P7.CD neighbor-bump: 2.00299 Ang L3.O and I4.CG2 neighbor-bump: 2.7874 Ang L3.C and I4.CG2 Number of specific fragments= 1 total=835 # 1efvA.10.4 read from T0191.t2k.frag # found chain 1efvA in template set T0191 10 :GLIGHPVEH 1efvA 23 :LVIAEHAND Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.40329 Ang H6.C and P7.CD neighbor-bump: 2.26674 Ang H6.O and P7.CD other bump:2.90026 Ang G5.C and P7.CD neighbor-bump: 2.6152 Ang H6.N and P7.CD neighbor-bump: 2.04254 Ang H6.CA and P7.CD neighbor-bump: 2.28868 Ang H6.C and P7.CG neighbor-bump: 2.41356 Ang H6.O and P7.CG Number of specific fragments= 1 total=836 # 2ak3A.10.10 read from T0191.t2k.frag # found chain 2ak3A in template set T0191 10 :GLIGHPVEH 2ak3A 10 :IMGAPGSGK Fragment has 27 clashes (null) has 27 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.25234 Ang I4.CG1 and H10.ND1 other bump:3.00474 Ang I4.CG1 and H10.CG other bump:2.35201 Ang I4.CG1 and H10.CB other bump:2.08356 Ang I4.CD1 and H10.CB other bump:3.30291 Ang I4.CG1 and H10.CA other bump:2.23158 Ang I4.CD1 and H10.CA other bump:2.42475 Ang I4.CD1 and H10.N other bump:2.80239 Ang G5.N and V8.CG2 other bump:2.99097 Ang G5.CA and V8.CG2 other bump:2.4932 Ang G5.O and V8.CG2 other bump:3.0058 Ang G5.C and V8.CG2 other bump:2.75009 Ang I4.CB and V8.CG1 other bump:3.05545 Ang I4.CD1 and V8.CG1 neighbor-bump: 0.97962 Ang H6.C and P7.CD self-bump: 1.35865 Ang P7.N and P7.CD neighbor-bump: 2.1158 Ang H6.CB and P7.CD neighbor-bump: 1.75384 Ang H6.CA and P7.CD neighbor-bump: 1.9271 Ang H6.O and P7.CD neighbor-bump: 2.05536 Ang H6.C and P7.CG self-bump: 2.2029 Ang P7.N and P7.CG neighbor-bump: 3.06001 Ang H6.CB and P7.CG neighbor-bump: 3.13096 Ang H6.CA and P7.CG neighbor-bump: 2.17058 Ang H6.O and P7.CG neighbor-bump: 2.4064 Ang H6.C and P7.CB neighbor-bump: 2.12903 Ang H6.O and P7.CB neighbor-bump: 1.82218 Ang L3.O and I4.CG2 neighbor-bump: 2.7004 Ang L3.C and I4.CG2 Number of specific fragments= 1 total=837 # 1dg9A.10.10 read from T0191.t2k.frag # found chain 1dg9A in template set T0191 10 :GLIGHPVEH 1dg9A 11 :VCLGNICRS Fragment has 49 clashes (null) has 49 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.04314 Ang G2.O and H10.NE2 other bump:1.10865 Ang G2.C and H10.NE2 other bump:1.70659 Ang L3.N and H10.NE2 other bump:2.39798 Ang G2.CA and H10.NE2 other bump:2.29489 Ang L3.CA and H10.NE2 other bump:2.73225 Ang G1.C and H10.CE1 other bump:1.50493 Ang G2.O and H10.CE1 other bump:1.20446 Ang G2.C and H10.CE1 other bump:2.32028 Ang L3.N and H10.CE1 other bump:1.66552 Ang G2.N and H10.CE1 other bump:1.46106 Ang G2.CA and H10.CE1 other bump:2.43707 Ang G1.O and H10.ND1 other bump:2.13757 Ang G1.C and H10.ND1 other bump:2.18597 Ang G2.C and H10.ND1 other bump:1.77963 Ang G2.N and H10.ND1 other bump:1.95859 Ang G2.CA and H10.ND1 other bump:2.1583 Ang L3.CB and H10.CD2 other bump:2.92814 Ang L3.CD1 and H10.CD2 other bump:2.42204 Ang G2.O and H10.CD2 other bump:2.14807 Ang G2.C and H10.CD2 other bump:1.93009 Ang L3.N and H10.CD2 other bump:1.71377 Ang L3.CG and H10.CD2 other bump:3.17423 Ang G2.CA and H10.CD2 other bump:2.27032 Ang L3.CA and H10.CD2 other bump:3.10907 Ang L3.CB and H10.CG other bump:2.59747 Ang G2.C and H10.CG other bump:2.57351 Ang L3.N and H10.CG other bump:2.57376 Ang L3.CG and H10.CG other bump:3.1327 Ang G2.N and H10.CG other bump:2.95663 Ang G2.CA and H10.CG other bump:2.94281 Ang L3.CD1 and H10.CB other bump:2.93179 Ang L3.CD1 and H10.CA other bump:1.81648 Ang L3.CD1 and H10.N other bump:2.72505 Ang L3.CG and H10.N other bump:2.58549 Ang L3.CD1 and E9.C other bump:2.41367 Ang L3.CD2 and E9.OE1 other bump:2.99607 Ang L3.CD2 and E9.CD other bump:2.73741 Ang L3.CD1 and E9.CB other bump:2.36403 Ang L3.CD2 and E9.CB other bump:2.65266 Ang L3.CD1 and E9.CA other bump:2.68999 Ang L3.CD1 and E9.N neighbor-bump: 1.88932 Ang H6.C and P7.CD other bump:2.90458 Ang G5.CA and P7.CD other bump:1.92024 Ang G5.C and P7.CD other bump:2.04204 Ang G5.O and P7.CD neighbor-bump: 2.43607 Ang H6.CA and P7.CD neighbor-bump: 2.14094 Ang H6.N and P7.CD other bump:2.92195 Ang G5.C and P7.CG other bump:2.51663 Ang G5.O and P7.CG Number of specific fragments= 1 total=838 # 1efvA.11.5 read from T0191.t2k.frag # found chain 1efvA in template set T0191 11 :LIGHPVEHS 1efvA 24 :VIAEHANDS Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.90026 Ang G4.C and P6.CD neighbor-bump: 2.6152 Ang H5.N and P6.CD neighbor-bump: 2.04254 Ang H5.CA and P6.CD neighbor-bump: 1.40329 Ang H5.C and P6.CD neighbor-bump: 2.26674 Ang H5.O and P6.CD neighbor-bump: 2.28868 Ang H5.C and P6.CG neighbor-bump: 2.41356 Ang H5.O and P6.CG Number of specific fragments= 1 total=839 # 5ukdA.11.11 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 11 :LIGHPVEHS 5ukdA 12 :LGGPGSGKG Fragment has 47 clashes (null) has 47 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.01039 Ang I3.CB and H9.NE2 other bump:2.22044 Ang I3.CG2 and H9.NE2 other bump:2.80527 Ang I3.CA and H9.NE2 other bump:1.46262 Ang I3.CG1 and H9.NE2 other bump:2.12012 Ang I3.CD1 and H9.NE2 other bump:1.8499 Ang L2.O and H9.NE2 other bump:2.15644 Ang L2.C and H9.NE2 other bump:2.7216 Ang I3.CG1 and H9.CE1 other bump:1.87489 Ang L2.O and H9.CE1 other bump:2.61594 Ang L2.CA and H9.CE1 other bump:2.20138 Ang L2.C and H9.CE1 other bump:2.82701 Ang G1.C and H9.CE1 other bump:2.40235 Ang L2.N and H9.CE1 other bump:3.18868 Ang I3.CG1 and H9.ND1 other bump:3.10457 Ang I3.CD1 and H9.ND1 other bump:2.90079 Ang G1.C and H9.ND1 other bump:2.57689 Ang I3.CB and H9.CD2 other bump:1.22112 Ang I3.CG1 and H9.CD2 other bump:1.18693 Ang I3.CD1 and H9.CD2 other bump:2.55423 Ang I3.CG1 and H9.CG other bump:2.16965 Ang I3.CD1 and H9.CG other bump:3.08554 Ang I3.CD1 and H9.CB neighbor-bump: 2.47615 Ang V7.O and E8.CG neighbor-bump: 2.83928 Ang V7.C and E8.CG other bump:3.05222 Ang G4.CA and V7.CG2 other bump:3.01043 Ang G4.C and V7.CG2 other bump:2.76283 Ang G4.N and V7.CG2 other bump:2.72603 Ang I3.CB and V7.CG1 other bump:3.1348 Ang I3.CG2 and V7.CG1 other bump:3.15843 Ang I3.CG1 and V7.CG1 other bump:3.00001 Ang I3.CD1 and V7.CG1 other bump:3.16276 Ang I3.CB and V7.CB other bump:3.13428 Ang I3.CD1 and V7.CB neighbor-bump: 2.05923 Ang H5.O and P6.CD neighbor-bump: 1.00385 Ang H5.C and P6.CD self-bump: 1.28773 Ang P6.N and P6.CD neighbor-bump: 1.60675 Ang H5.CA and P6.CD neighbor-bump: 2.18446 Ang H5.CB and P6.CD neighbor-bump: 2.17841 Ang H5.O and P6.CG neighbor-bump: 1.93034 Ang H5.C and P6.CG self-bump: 2.13785 Ang P6.N and P6.CG neighbor-bump: 2.88873 Ang H5.CA and P6.CG neighbor-bump: 2.92761 Ang H5.CB and P6.CG neighbor-bump: 2.03432 Ang H5.O and P6.CB neighbor-bump: 2.26269 Ang H5.C and P6.CB neighbor-bump: 2.0026 Ang L2.O and I3.CG2 neighbor-bump: 2.84062 Ang L2.C and I3.CG2 Number of specific fragments= 1 total=840 # 1qf9A.11.11 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 11 :LIGHPVEHS 1qf9A 12 :LGGPGSGKG Fragment has 46 clashes (null) has 46 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.91032 Ang I3.CB and H9.NE2 other bump:2.00449 Ang I3.CG2 and H9.NE2 other bump:2.79315 Ang I3.CA and H9.NE2 other bump:1.48523 Ang I3.CG1 and H9.NE2 other bump:2.05396 Ang I3.CD1 and H9.NE2 other bump:1.89069 Ang L2.O and H9.NE2 other bump:2.2191 Ang L2.C and H9.NE2 other bump:2.8517 Ang I3.CG2 and H9.CE1 other bump:2.71282 Ang I3.CG1 and H9.CE1 other bump:2.97501 Ang I3.CD1 and H9.CE1 other bump:1.87558 Ang L2.O and H9.CE1 other bump:2.64059 Ang L2.CA and H9.CE1 other bump:2.25712 Ang L2.C and H9.CE1 other bump:2.86455 Ang G1.C and H9.CE1 other bump:2.42992 Ang L2.N and H9.CE1 other bump:3.15675 Ang I3.CG1 and H9.ND1 other bump:2.93745 Ang I3.CD1 and H9.ND1 other bump:2.88652 Ang G1.C and H9.ND1 other bump:2.47406 Ang I3.CB and H9.CD2 other bump:1.21763 Ang I3.CG1 and H9.CD2 other bump:0.945008 Ang I3.CD1 and H9.CD2 other bump:2.51781 Ang I3.CG1 and H9.CG other bump:1.92921 Ang I3.CD1 and H9.CG other bump:2.84156 Ang I3.CD1 and H9.CB neighbor-bump: 2.52447 Ang V7.O and E8.CG neighbor-bump: 2.85242 Ang V7.C and E8.CG other bump:3.01122 Ang G4.CA and V7.CG2 other bump:3.02499 Ang G4.C and V7.CG2 other bump:2.74146 Ang G4.N and V7.CG2 other bump:2.79317 Ang I3.CB and V7.CG1 other bump:3.11841 Ang I3.CG2 and V7.CG1 other bump:3.13196 Ang I3.CB and V7.CB neighbor-bump: 2.18224 Ang H5.O and P6.CD neighbor-bump: 1.12748 Ang H5.C and P6.CD self-bump: 1.26659 Ang P6.N and P6.CD neighbor-bump: 1.67073 Ang H5.CA and P6.CD neighbor-bump: 2.23705 Ang H5.CB and P6.CD neighbor-bump: 2.38823 Ang H5.O and P6.CG neighbor-bump: 2.05162 Ang H5.C and P6.CG self-bump: 2.11993 Ang P6.N and P6.CG neighbor-bump: 2.93307 Ang H5.CA and P6.CG neighbor-bump: 2.94737 Ang H5.CB and P6.CG neighbor-bump: 2.13383 Ang H5.O and P6.CB neighbor-bump: 2.3081 Ang H5.C and P6.CB neighbor-bump: 1.96874 Ang L2.O and I3.CG2 neighbor-bump: 2.79959 Ang L2.C and I3.CG2 Number of specific fragments= 1 total=841 # 1dpgA.11.12 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 11 :LIGHPVEHS 1dpgA 13 :GTGDLAKRK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=842 # 2dpg.11.12 read from T0191.t2k.frag # found chain 2dpg in template set T0191 11 :LIGHPVEHS 2dpg 13 :GTGDLAKRK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=843 # 1kamA.11.12 read from T0191.t2k.frag # found chain 1kamA in template set T0191 11 :LIGHPVEHS 1kamA 8 :GGTFDPPHN Fragment has 28 clashes (null) has 28 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.64027 Ang V7.CG1 and E8.O other bump:2.9701 Ang H5.CB and E8.CG neighbor-bump: 1.95443 Ang H5.CA and P6.CD neighbor-bump: 1.53166 Ang H5.C and P6.CD other bump:2.93266 Ang G4.CA and P6.CD other bump:1.96362 Ang G4.O and P6.CD other bump:1.74181 Ang G4.C and P6.CD neighbor-bump: 1.69784 Ang H5.N and P6.CD self-bump: 1.37441 Ang P6.N and P6.CD other bump:2.87282 Ang G4.CA and P6.CG other bump:2.40801 Ang G4.C and P6.CG neighbor-bump: 2.72771 Ang H5.N and P6.CG self-bump: 2.0523 Ang P6.N and P6.CG self-bump: 2.15287 Ang P6.N and P6.CB other bump:1.01332 Ang I3.CG1 and H5.NE2 other bump:1.59935 Ang I3.CD1 and H5.NE2 other bump:2.49597 Ang I3.CB and H5.NE2 other bump:2.06426 Ang I3.CG1 and H5.CE1 other bump:2.72295 Ang I3.CD1 and H5.CE1 other bump:2.66301 Ang I3.CG1 and H5.ND1 other bump:2.96831 Ang I3.CD1 and H5.ND1 other bump:1.36252 Ang I3.CG1 and H5.CD2 other bump:0.893507 Ang I3.CD1 and H5.CD2 other bump:2.63487 Ang I3.CB and H5.CD2 other bump:2.37488 Ang I3.CG1 and H5.CG other bump:2.16952 Ang I3.CD1 and H5.CG neighbor-bump: 2.0659 Ang L2.O and I3.CG2 neighbor-bump: 2.76209 Ang L2.C and I3.CG2 Number of specific fragments= 1 total=844 # 1e5mA.12.15 read from T0191.t2k.frag # found chain 1e5mA in template set T0191 12 :IGHPVEHSF 1e5mA 16 :AITPIGNTL Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.92765 Ang V6.O and E7.CG neighbor-bump: 2.81292 Ang V6.C and E7.CG other bump:2.09387 Ang I2.CG1 and H4.NE2 other bump:2.04249 Ang I2.CD1 and H4.NE2 other bump:2.68483 Ang I2.CB and H4.CE1 other bump:1.23044 Ang I2.CG1 and H4.CE1 other bump:0.946255 Ang I2.CD1 and H4.CE1 other bump:1.95439 Ang I2.CG1 and H4.ND1 other bump:1.94338 Ang I2.CD1 and H4.ND1 other bump:2.96591 Ang I2.CG1 and H4.CD2 other bump:3.07501 Ang I2.CD1 and H4.CD2 other bump:2.91289 Ang I2.CG1 and H4.CG Number of specific fragments= 1 total=845 # 1nfp.12.12 read from T0191.t2k.frag # found chain 1nfp in template set T0191 12 :IGHPVEHSF 1nfp 13 :FYHVGQQEP Fragment has 21 clashes (null) has 21 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.21983 Ang H4.ND1 and F10.CZ other bump:2.86751 Ang H4.CE1 and F10.CZ other bump:2.71006 Ang G3.CA and F10.CZ other bump:2.77921 Ang G3.C and F10.CZ other bump:3.29737 Ang H4.ND1 and F10.CE2 other bump:2.64093 Ang H4.CE1 and F10.CE2 other bump:1.83005 Ang G3.CA and F10.CE1 other bump:2.2801 Ang G3.O and F10.CE1 other bump:2.28456 Ang G3.C and F10.CE1 other bump:2.84546 Ang G3.CA and F10.CD1 other bump:2.60745 Ang G3.O and F10.CD1 other bump:2.25976 Ang P5.CG and H8.NE2 other bump:2.56342 Ang P5.CA and H8.CE1 other bump:2.551 Ang P5.CB and H8.CE1 other bump:2.0474 Ang P5.CG and H8.CE1 other bump:1.78408 Ang P5.O and H8.CE1 other bump:2.32799 Ang P5.C and H8.CE1 other bump:3.20961 Ang P5.CA and H8.ND1 other bump:1.21622 Ang P5.O and H8.ND1 other bump:2.33949 Ang P5.C and H8.ND1 other bump:2.54196 Ang P5.O and H8.CG Number of specific fragments= 1 total=846 # 1efvA.12.6 read from T0191.t2k.frag # found chain 1efvA in template set T0191 12 :IGHPVEHSF 1efvA 25 :IAEHANDSL Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.90026 Ang G3.C and P5.CD neighbor-bump: 2.6152 Ang H4.N and P5.CD neighbor-bump: 2.04254 Ang H4.CA and P5.CD neighbor-bump: 1.40329 Ang H4.C and P5.CD neighbor-bump: 2.26674 Ang H4.O and P5.CD neighbor-bump: 2.28868 Ang H4.C and P5.CG neighbor-bump: 2.41356 Ang H4.O and P5.CG Number of specific fragments= 1 total=847 # 1dpgA.12.13 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 12 :IGHPVEHSF 1dpgA 14 :TGDLAKRKL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=848 # 2dpg.12.13 read from T0191.t2k.frag # found chain 2dpg in template set T0191 12 :IGHPVEHSF 2dpg 14 :TGDLAKRKL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=849 # 1kamA.12.13 read from T0191.t2k.frag # found chain 1kamA in template set T0191 12 :IGHPVEHSF 1kamA 9 :GTFDPPHNG Fragment has 30 clashes (null) has 30 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92501 Ang H8.ND1 and F10.CB other bump:2.72206 Ang H8.CE1 and F10.CB neighbor-bump: 2.64027 Ang V6.CG1 and E7.O other bump:2.9701 Ang H4.CB and E7.CG other bump:2.93266 Ang G3.CA and P5.CD other bump:1.96362 Ang G3.O and P5.CD other bump:1.74181 Ang G3.C and P5.CD neighbor-bump: 1.69784 Ang H4.N and P5.CD neighbor-bump: 1.95443 Ang H4.CA and P5.CD neighbor-bump: 1.53166 Ang H4.C and P5.CD self-bump: 1.37441 Ang P5.N and P5.CD other bump:2.87282 Ang G3.CA and P5.CG other bump:2.40801 Ang G3.C and P5.CG neighbor-bump: 2.72771 Ang H4.N and P5.CG self-bump: 2.0523 Ang P5.N and P5.CG self-bump: 2.15287 Ang P5.N and P5.CB other bump:1.44678 Ang I2.CD1 and H4.NE2 other bump:2.47084 Ang I2.CB and H4.NE2 other bump:1.0303 Ang I2.CG1 and H4.NE2 other bump:2.61097 Ang I2.CD1 and H4.CE1 other bump:2.06122 Ang I2.CG1 and H4.CE1 other bump:2.96351 Ang I2.CD1 and H4.ND1 other bump:2.64279 Ang I2.CG1 and H4.ND1 other bump:1.00761 Ang I2.CD1 and H4.CD2 other bump:2.6157 Ang I2.CB and H4.CD2 other bump:1.35077 Ang I2.CG1 and H4.CD2 other bump:2.27922 Ang I2.CD1 and H4.CG other bump:2.3494 Ang I2.CG1 and H4.CG neighbor-bump: 2.15934 Ang G1.O and I2.CG2 neighbor-bump: 2.85249 Ang G1.C and I2.CG2 Number of specific fragments= 1 total=850 # 1e5mA.13.16 read from T0191.t2k.frag # found chain 1e5mA in template set T0191 13 :GHPVEHSFS 1e5mA 17 :ITPIGNTLQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.18324 Ang E6.CG and G11.CA other bump:3.22491 Ang E6.CD and G11.CA neighbor-bump: 1.92765 Ang V5.O and E6.CG neighbor-bump: 2.81292 Ang V5.C and E6.CG Number of specific fragments= 1 total=851 # 1dpgA.13.14 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 13 :GHPVEHSFS 1dpgA 15 :GDLAKRKLY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=852 # 2dpg.13.14 read from T0191.t2k.frag # found chain 2dpg in template set T0191 13 :GHPVEHSFS 2dpg 15 :GDLAKRKLY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=853 # 1nfp.13.13 read from T0191.t2k.frag # found chain 1nfp in template set T0191 13 :GHPVEHSFS 1nfp 14 :YHVGQQEPS Fragment has 21 clashes (null) has 21 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.86752 Ang H3.CE1 and F9.CZ other bump:3.21985 Ang H3.ND1 and F9.CZ other bump:2.71007 Ang G2.CA and F9.CZ other bump:2.77923 Ang G2.C and F9.CZ other bump:2.64094 Ang H3.CE1 and F9.CE2 other bump:3.29738 Ang H3.ND1 and F9.CE2 other bump:1.83007 Ang G2.CA and F9.CE1 other bump:2.28012 Ang G2.O and F9.CE1 other bump:2.28459 Ang G2.C and F9.CE1 other bump:2.84547 Ang G2.CA and F9.CD1 other bump:2.60747 Ang G2.O and F9.CD1 other bump:2.25976 Ang P4.CG and H7.NE2 other bump:2.0474 Ang P4.CG and H7.CE1 other bump:1.78408 Ang P4.O and H7.CE1 other bump:2.56342 Ang P4.CA and H7.CE1 other bump:2.551 Ang P4.CB and H7.CE1 other bump:2.32799 Ang P4.C and H7.CE1 other bump:1.21622 Ang P4.O and H7.ND1 other bump:3.20961 Ang P4.CA and H7.ND1 other bump:2.33949 Ang P4.C and H7.ND1 other bump:2.54196 Ang P4.O and H7.CG Number of specific fragments= 1 total=854 # 1kamA.13.14 read from T0191.t2k.frag # found chain 1kamA in template set T0191 13 :GHPVEHSFS 1kamA 10 :TFDPPHNGH Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.9502 Ang H7.ND1 and F9.CB other bump:2.73788 Ang H7.CE1 and F9.CB neighbor-bump: 2.64027 Ang V5.CG1 and E6.O other bump:2.9701 Ang H3.CB and E6.CG neighbor-bump: 1.53166 Ang H3.C and P4.CD self-bump: 1.37441 Ang P4.N and P4.CD other bump:2.93266 Ang G2.CA and P4.CD other bump:1.96362 Ang G2.O and P4.CD other bump:1.74181 Ang G2.C and P4.CD neighbor-bump: 1.69784 Ang H3.N and P4.CD neighbor-bump: 1.95443 Ang H3.CA and P4.CD self-bump: 2.0523 Ang P4.N and P4.CG other bump:2.87282 Ang G2.CA and P4.CG other bump:2.40801 Ang G2.C and P4.CG neighbor-bump: 2.72771 Ang H3.N and P4.CG self-bump: 2.15287 Ang P4.N and P4.CB Number of specific fragments= 1 total=855 # 1efvA.13.7 read from T0191.t2k.frag # found chain 1efvA in template set T0191 13 :GHPVEHSFS 1efvA 26 :AEHANDSLA Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.86176 Ang F9.CE2 and S10.O other bump:2.6144 Ang H3.CG and S10.OG other bump:2.33784 Ang H3.CD2 and S10.OG other bump:2.65293 Ang H3.CB and S10.OG other bump:2.7753 Ang H3.CD2 and S10.CB neighbor-bump: 1.40329 Ang H3.C and P4.CD neighbor-bump: 2.26674 Ang H3.O and P4.CD other bump:2.90026 Ang G2.C and P4.CD neighbor-bump: 2.6152 Ang H3.N and P4.CD neighbor-bump: 2.04254 Ang H3.CA and P4.CD neighbor-bump: 2.28868 Ang H3.C and P4.CG neighbor-bump: 2.41356 Ang H3.O and P4.CG Number of specific fragments= 1 total=856 # 1e5mA.14.17 read from T0191.t2k.frag # found chain 1e5mA in template set T0191 14 :HPVEHSFSP 1e5mA 18 :TPIGNTLQD Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87417 Ang E5.CB and G11.CA other bump:3.22068 Ang E5.CG and G11.CA other bump:2.52668 Ang E5.CB and G11.N other bump:2.90785 Ang E5.CG and G11.N other bump:2.99708 Ang E5.CD and P10.C other bump:2.52656 Ang E5.CB and P10.C other bump:2.27495 Ang E5.CG and P10.C other bump:2.57951 Ang E5.CD and P10.O other bump:2.76925 Ang E5.CB and P10.O other bump:1.82163 Ang E5.CG and P10.O other bump:2.96975 Ang S7.CB and P10.CD other bump:1.69969 Ang S7.OG and P10.CD other bump:1.93999 Ang S7.OG and P10.CG other bump:3.06807 Ang E5.CD and P10.CB other bump:2.30664 Ang E5.OE1 and P10.CB other bump:3.06588 Ang E5.CB and P10.CB other bump:3.22491 Ang E5.CD and P10.CA other bump:3.18324 Ang E5.CG and P10.CA neighbor-bump: 1.92765 Ang V4.O and E5.CG neighbor-bump: 2.81292 Ang V4.C and E5.CG other bump:2.82732 Ang H2.ND1 and V4.CG1 neighbor-bump: 2.90652 Ang H2.ND1 and P3.CD Number of specific fragments= 1 total=857 # 1nfp.14.14 read from T0191.t2k.frag # found chain 1nfp in template set T0191 14 :HPVEHSFSP 1nfp 15 :HVGQQEPSL Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.35792 Ang S7.OG and P10.CD other bump:2.27459 Ang S7.O and P10.CD other bump:2.87143 Ang S7.C and P10.CD other bump:2.49523 Ang S7.OG and P10.CG other bump:2.86752 Ang H2.CE1 and F8.CZ other bump:2.77923 Ang G1.C and F8.CZ other bump:3.21985 Ang H2.ND1 and F8.CZ other bump:2.64094 Ang H2.CE1 and F8.CE2 other bump:3.29738 Ang H2.ND1 and F8.CE2 other bump:2.28459 Ang G1.C and F8.CE1 other bump:2.28012 Ang G1.O and F8.CE1 other bump:2.60747 Ang G1.O and F8.CD1 other bump:2.25976 Ang P3.CG and H6.NE2 other bump:2.0474 Ang P3.CG and H6.CE1 other bump:1.78408 Ang P3.O and H6.CE1 other bump:2.551 Ang P3.CB and H6.CE1 other bump:2.56342 Ang P3.CA and H6.CE1 other bump:2.32799 Ang P3.C and H6.CE1 other bump:1.21622 Ang P3.O and H6.ND1 other bump:3.20961 Ang P3.CA and H6.ND1 other bump:2.33949 Ang P3.C and H6.ND1 other bump:2.54196 Ang P3.O and H6.CG Number of specific fragments= 1 total=858 # 1kamA.14.15 read from T0191.t2k.frag # found chain 1kamA in template set T0191 14 :HPVEHSFSP 1kamA 11 :FDPPHNGHL Fragment has 17 clashes (null) has 17 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.95387 Ang H6.O and P10.CD other bump:3.06911 Ang H6.C and P10.CD other bump:3.10144 Ang S7.C and P10.CD other bump:2.9502 Ang H6.ND1 and F8.CB other bump:2.73788 Ang H6.CE1 and F8.CB neighbor-bump: 2.64027 Ang V4.CG1 and E5.O other bump:2.9701 Ang H2.CB and E5.CG other bump:1.96362 Ang G1.O and P3.CD other bump:1.7418 Ang G1.C and P3.CD neighbor-bump: 1.69783 Ang H2.N and P3.CD neighbor-bump: 1.95443 Ang H2.CA and P3.CD neighbor-bump: 1.53166 Ang H2.C and P3.CD self-bump: 1.37442 Ang P3.N and P3.CD other bump:2.40801 Ang G1.C and P3.CG neighbor-bump: 2.72771 Ang H2.N and P3.CG self-bump: 2.0523 Ang P3.N and P3.CG self-bump: 2.15288 Ang P3.N and P3.CB Number of specific fragments= 1 total=859 # 1efvA.14.8 read from T0191.t2k.frag # found chain 1efvA in template set T0191 14 :HPVEHSFSP 1efvA 27 :EHANDSLAP Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.86176 Ang F8.CE2 and S9.O other bump:2.7507 Ang H2.CD2 and S9.CB neighbor-bump: 2.04254 Ang H2.CA and P3.CD neighbor-bump: 1.40329 Ang H2.C and P3.CD neighbor-bump: 2.26674 Ang H2.O and P3.CD other bump:2.90026 Ang G1.C and P3.CD neighbor-bump: 2.6152 Ang H2.N and P3.CD neighbor-bump: 2.28868 Ang H2.C and P3.CG neighbor-bump: 2.41356 Ang H2.O and P3.CG Number of specific fragments= 1 total=860 # 1qfcA.14.18 read from T0191.t2k.frag # found chain 1qfcA in template set T0191 14 :HPVEHSFSP 1qfcA 19 :PNAPFHTAR Fragment has 25 clashes (null) has 25 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.09781 Ang F8.CD2 and P10.CB other bump:3.12582 Ang E5.CB and S7.N neighbor-bump: 3.15675 Ang V4.CB and E5.C neighbor-bump: 3.1116 Ang V4.CG1 and E5.C neighbor-bump: 2.87764 Ang V4.CG2 and E5.C neighbor-bump: 2.40619 Ang V4.CB and E5.CA neighbor-bump: 1.76315 Ang V4.CG1 and E5.CA neighbor-bump: 2.74284 Ang V4.CG2 and E5.CA neighbor-bump: 2.05715 Ang V4.CG1 and E5.N self-bump: 2.38268 Ang V4.CG1 and V4.C neighbor-bump: 2.52837 Ang P3.O and V4.CG2 self-bump: 1.30334 Ang V4.CA and V4.CB self-bump: 1.39697 Ang P3.N and P3.CD neighbor-bump: 2.49667 Ang H2.N and P3.CD neighbor-bump: 1.65233 Ang H2.CA and P3.CD neighbor-bump: 2.4184 Ang H2.CB and P3.CD neighbor-bump: 1.40581 Ang H2.O and P3.CD neighbor-bump: 0.59547 Ang H2.C and P3.CD neighbor-bump: 3.10274 Ang H2.CA and P3.CG neighbor-bump: 1.74015 Ang H2.O and P3.CG neighbor-bump: 1.94709 Ang H2.C and P3.CG neighbor-bump: 2.21183 Ang H2.O and P3.CB neighbor-bump: 2.54276 Ang H2.C and P3.CB neighbor-bump: 2.4899 Ang H2.CB and P3.N self-bump: 1.28147 Ang H2.CA and H2.CB Number of specific fragments= 1 total=861 # 1bs9.14.15 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 14 :HPVEHSFSP 1bs9 16 :SPGYGSSST Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.36767 Ang G1.C and H6.NE2 other bump:1.9819 Ang H2.N and H6.NE2 other bump:2.81413 Ang G1.C and H6.CD2 other bump:2.81538 Ang H2.N and H6.CD2 self-bump: 1.27383 Ang H6.CA and H6.CB neighbor-bump: 3.00771 Ang V4.CG1 and E5.CG neighbor-bump: 3.07729 Ang V4.CG1 and E5.CA neighbor-bump: 2.04651 Ang V4.CG1 and E5.N neighbor-bump: 2.48039 Ang V4.CB and E5.N self-bump: 2.39538 Ang V4.CG1 and V4.C self-bump: 1.27728 Ang V4.CA and V4.CB Number of specific fragments= 1 total=862 # 1e5mA.15.18 read from T0191.t2k.frag # found chain 1e5mA in template set T0191 15 :PVEHSFSPI 1e5mA 19 :PIGNTLQDY Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87417 Ang E4.CB and I10.CA other bump:3.22068 Ang E4.CG and I10.CA other bump:2.52668 Ang E4.CB and I10.N other bump:2.90785 Ang E4.CG and I10.N other bump:2.52656 Ang E4.CB and P9.C other bump:2.27495 Ang E4.CG and P9.C other bump:2.99708 Ang E4.CD and P9.C other bump:2.76925 Ang E4.CB and P9.O other bump:1.82163 Ang E4.CG and P9.O other bump:2.57951 Ang E4.CD and P9.O other bump:2.96975 Ang S6.CB and P9.CD other bump:1.69969 Ang S6.OG and P9.CD other bump:1.93999 Ang S6.OG and P9.CG other bump:2.30664 Ang E4.OE1 and P9.CB other bump:3.06588 Ang E4.CB and P9.CB other bump:3.06807 Ang E4.CD and P9.CB other bump:3.18324 Ang E4.CG and P9.CA other bump:3.22491 Ang E4.CD and P9.CA neighbor-bump: 1.92765 Ang V3.O and E4.CG neighbor-bump: 2.81292 Ang V3.C and E4.CG Number of specific fragments= 1 total=863 # 1efvA.15.9 read from T0191.t2k.frag # found chain 1efvA in template set T0191 15 :PVEHSFSPI 1efvA 28 :HANDSLAPI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.12923 Ang F7.CZ and G11.CA neighbor-bump: 2.86176 Ang F7.CE2 and S8.O neighbor-bump: 1.6626 Ang G1.C and P2.CD Number of specific fragments= 1 total=864 # 1kamA.15.16 read from T0191.t2k.frag # found chain 1kamA in template set T0191 15 :PVEHSFSPI 1kamA 12 :DPPHNGHLL Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.06911 Ang H5.C and P9.CD other bump:1.95387 Ang H5.O and P9.CD other bump:3.10144 Ang S6.C and P9.CD other bump:2.9502 Ang H5.ND1 and F7.CB other bump:2.73788 Ang H5.CE1 and F7.CB neighbor-bump: 2.64027 Ang V3.CG1 and E4.O self-bump: 2.2268 Ang P2.CA and P2.CD self-bump: 2.10269 Ang P2.CA and P2.CG self-bump: 1.39934 Ang P2.CA and P2.CB Number of specific fragments= 1 total=865 # 1bs9.15.16 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 15 :PVEHSFSPI 1bs9 17 :PGYGSSSTV Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.27383 Ang H5.CA and H5.CB neighbor-bump: 3.00771 Ang V3.CG1 and E4.CG neighbor-bump: 3.07729 Ang V3.CG1 and E4.CA neighbor-bump: 2.48039 Ang V3.CB and E4.N neighbor-bump: 2.04651 Ang V3.CG1 and E4.N self-bump: 2.39538 Ang V3.CG1 and V3.C self-bump: 1.27728 Ang V3.CA and V3.CB Number of specific fragments= 1 total=866 # 1g66A.15.16 read from T0191.t2k.frag # found chain 1g66A in training set T0191 15 :PVEHSFSPI 1g66A 17 :PGYGSSSTV Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59375 Ang S6.O and P9.CD self-bump: 1.29092 Ang H5.CA and H5.CB neighbor-bump: 2.92426 Ang V3.CG1 and E4.CG neighbor-bump: 3.08043 Ang V3.CG1 and E4.CA neighbor-bump: 2.07359 Ang V3.CG1 and E4.N neighbor-bump: 2.47305 Ang V3.CB and E4.N self-bump: 2.4019 Ang V3.CG1 and V3.C self-bump: 1.30006 Ang V3.CA and V3.CB Number of specific fragments= 1 total=867 # 1bkcA.15.19 read from T0191.t2k.frag # found chain 1bkcA in template set T0191 15 :PVEHSFSPI 1bkcA 238 :YMGRGEEST Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.34319 Ang E4.OE2 and G11.CA other bump:2.55208 Ang E4.CG and G11.CA other bump:0.895134 Ang E4.OE1 and G11.CA other bump:1.51966 Ang E4.CD and G11.CA other bump:3.31396 Ang E4.CB and G11.CA other bump:1.2164 Ang E4.OE1 and G11.N other bump:2.46229 Ang E4.CD and G11.N other bump:2.02077 Ang E4.OE1 and I10.C other bump:3.15426 Ang E4.CD and I10.C neighbor-bump: 2.71095 Ang S8.OG and P9.CD neighbor-bump: 2.08445 Ang G1.C and P2.CD self-bump: 1.37271 Ang P2.N and P2.CD Number of specific fragments= 1 total=868 # 1kamA.16.17 read from T0191.t2k.frag # found chain 1kamA in template set T0191 16 :VEHSFSPIM 1kamA 13 :PPHNGHLLM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.95387 Ang H4.O and P8.CD other bump:3.06911 Ang H4.C and P8.CD other bump:3.10144 Ang S5.C and P8.CD other bump:2.9502 Ang H4.ND1 and F6.CB other bump:2.73788 Ang H4.CE1 and F6.CB Number of specific fragments= 1 total=869 # 1efvA.16.10 read from T0191.t2k.frag # found chain 1efvA in template set T0191 16 :VEHSFSPIM 1efvA 29 :ANDSLAPIT Fragment has 16 clashes (null) has 16 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.92646 Ang F6.CE1 and M10.CE other bump:2.82032 Ang F6.CD1 and M10.CE other bump:2.23152 Ang F6.CE1 and M10.SD other bump:2.62242 Ang F6.CD1 and M10.SD other bump:2.85233 Ang F6.CZ and M10.SD other bump:2.72685 Ang F6.CE1 and M10.CB other bump:2.44447 Ang F6.CE2 and M10.CB other bump:1.82191 Ang F6.CZ and M10.CB other bump:3.12923 Ang F6.CZ and M10.CA neighbor-bump: 2.86176 Ang F6.CE2 and S7.O neighbor-bump: 2.83372 Ang V2.CG1 and E3.CA neighbor-bump: 1.67981 Ang V2.CG1 and E3.N neighbor-bump: 2.41188 Ang V2.CB and E3.N self-bump: 2.29566 Ang V2.CG1 and V2.C self-bump: 2.1856 Ang V2.CB and V2.C self-bump: 1.27539 Ang V2.CA and V2.CB Number of specific fragments= 1 total=870 # 1e5mA.16.19 read from T0191.t2k.frag # found chain 1e5mA in template set T0191 16 :VEHSFSPIM 1e5mA 20 :IGNTLQDYW Fragment has 20 clashes (null) has 20 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87417 Ang E3.CB and I9.CA other bump:3.22068 Ang E3.CG and I9.CA other bump:2.52668 Ang E3.CB and I9.N other bump:2.90785 Ang E3.CG and I9.N other bump:2.52656 Ang E3.CB and P8.C other bump:2.27495 Ang E3.CG and P8.C other bump:2.99708 Ang E3.CD and P8.C other bump:2.76925 Ang E3.CB and P8.O other bump:1.82163 Ang E3.CG and P8.O other bump:2.57951 Ang E3.CD and P8.O other bump:2.96975 Ang S5.CB and P8.CD other bump:1.69969 Ang S5.OG and P8.CD other bump:1.93999 Ang S5.OG and P8.CG other bump:2.30664 Ang E3.OE1 and P8.CB other bump:3.06588 Ang E3.CB and P8.CB other bump:3.06807 Ang E3.CD and P8.CB other bump:3.18324 Ang E3.CG and P8.CA other bump:3.22491 Ang E3.CD and P8.CA neighbor-bump: 1.92765 Ang V2.O and E3.CG neighbor-bump: 2.81292 Ang V2.C and E3.CG Number of specific fragments= 1 total=871 # 1bs9.16.17 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 16 :VEHSFSPIM 1bs9 18 :GYGSSSTVV Fragment has 17 clashes (null) has 17 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.85215 Ang F6.CG and M10.CE other bump:1.52406 Ang F6.CD2 and M10.CE other bump:0.988435 Ang F6.CE2 and M10.CE other bump:2.33354 Ang F6.CZ and M10.CE other bump:2.12002 Ang F6.CD2 and M10.SD other bump:2.21292 Ang F6.CE2 and M10.SD other bump:2.92533 Ang E3.CG and M10.SD other bump:2.63045 Ang E3.CD and M10.SD other bump:2.12822 Ang E3.OE2 and M10.SD other bump:2.53494 Ang F6.CE2 and M10.CG self-bump: 1.27383 Ang H4.CA and H4.CB neighbor-bump: 3.00771 Ang V2.CG1 and E3.CG neighbor-bump: 3.07729 Ang V2.CG1 and E3.CA neighbor-bump: 2.48039 Ang V2.CB and E3.N neighbor-bump: 2.04651 Ang V2.CG1 and E3.N self-bump: 2.39538 Ang V2.CG1 and V2.C self-bump: 1.27728 Ang V2.CA and V2.CB Number of specific fragments= 1 total=872 # 1bkcA.16.20 read from T0191.t2k.frag # found chain 1bkcA in template set T0191 16 :VEHSFSPIM 1bkcA 239 :MGRGEESTT Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.6542 Ang E3.CD and M10.C other bump:2.25571 Ang E3.OE1 and M10.C other bump:2.85178 Ang E3.CG and M10.SD other bump:2.7899 Ang E3.CB and M10.SD other bump:2.38381 Ang E3.CD and M10.CG other bump:1.55822 Ang E3.CG and M10.CG other bump:2.51007 Ang E3.OE1 and M10.CG other bump:3.13709 Ang E3.CA and M10.CG other bump:1.63029 Ang E3.CB and M10.CG other bump:2.05062 Ang E3.CD and M10.CB other bump:2.09901 Ang E3.CG and M10.CB other bump:2.01054 Ang E3.OE1 and M10.CB other bump:2.90396 Ang E3.CB and M10.CB other bump:1.51965 Ang E3.CD and M10.CA other bump:2.34318 Ang E3.OE2 and M10.CA other bump:2.55207 Ang E3.CG and M10.CA other bump:0.895128 Ang E3.OE1 and M10.CA other bump:3.31396 Ang E3.CB and M10.CA other bump:2.46228 Ang E3.CD and M10.N other bump:1.2164 Ang E3.OE1 and M10.N other bump:3.15427 Ang E3.CD and I9.C other bump:2.02077 Ang E3.OE1 and I9.C neighbor-bump: 2.71095 Ang S7.OG and P8.CD Number of specific fragments= 1 total=873 # 1bkcE.16.20 read from T0191.t2k.frag # found chain 1bkcE in template set T0191 16 :VEHSFSPIM 1bkcE 239 :MGRGEESTT Fragment has 47 clashes (null) has 47 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.16272 Ang E3.OE1 and M10.C other bump:2.45083 Ang E3.CD and M10.C other bump:2.60325 Ang E3.OE2 and M10.C other bump:2.77337 Ang E3.CB and M10.CE other bump:2.88526 Ang E3.CG and M10.SD other bump:2.74276 Ang E3.CB and M10.SD other bump:2.57686 Ang E3.OE1 and M10.CG other bump:1.41108 Ang E3.CG and M10.CG other bump:2.3581 Ang E3.CD and M10.CG other bump:2.9822 Ang E3.CA and M10.CG other bump:1.48514 Ang E3.CB and M10.CG other bump:2.00103 Ang E3.OE1 and M10.CB other bump:1.95875 Ang E3.CG and M10.CB other bump:1.98446 Ang E3.CD and M10.CB other bump:2.76528 Ang E3.CB and M10.CB other bump:0.829159 Ang E3.OE1 and M10.CA other bump:2.37314 Ang E3.CG and M10.CA other bump:1.27982 Ang E3.CD and M10.CA other bump:2.10267 Ang E3.OE2 and M10.CA other bump:3.19909 Ang E3.CB and M10.CA other bump:1.00003 Ang E3.OE1 and M10.N other bump:2.24953 Ang E3.CD and M10.N other bump:1.87963 Ang E3.OE1 and I9.C other bump:2.96033 Ang E3.CD and I9.C other bump:2.34739 Ang E3.OE1 and I9.O other bump:2.1065 Ang F6.CE2 and I9.CD1 other bump:2.40354 Ang F6.CZ and I9.CD1 other bump:2.92132 Ang F6.CE2 and I9.CG2 other bump:3.03765 Ang F6.CE1 and I9.CG2 other bump:2.24299 Ang F6.CZ and I9.CG2 other bump:3.16615 Ang F6.CD1 and I9.CG1 other bump:2.11168 Ang F6.CD2 and I9.CG1 other bump:0.716703 Ang F6.CE2 and I9.CG1 other bump:2.46989 Ang F6.CE1 and I9.CG1 other bump:1.16532 Ang F6.CZ and I9.CG1 other bump:2.63475 Ang F6.CD2 and I9.CB other bump:1.66888 Ang F6.CE2 and I9.CB other bump:2.67777 Ang F6.CE1 and I9.CB other bump:1.70717 Ang F6.CZ and I9.CB other bump:2.55918 Ang F6.CE2 and I9.CA other bump:3.16618 Ang F6.CZ and I9.CA other bump:2.75368 Ang F6.CD2 and I9.N other bump:2.66712 Ang F6.CE2 and I9.N neighbor-bump: 2.61031 Ang S7.OG and P8.CD other bump:2.5166 Ang E3.O and F6.CE1 other bump:3.11264 Ang H4.CB and F6.CE1 other bump:2.34764 Ang E3.O and F6.CD1 Number of specific fragments= 1 total=874 # 1kamA.17.18 read from T0191.t2k.frag # found chain 1kamA in template set T0191 17 :EHSFSPIMH 1kamA 14 :PHNGHLLMA Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.95387 Ang H3.O and P7.CD other bump:3.06911 Ang H3.C and P7.CD other bump:3.10144 Ang S4.C and P7.CD other bump:2.9502 Ang H3.ND1 and F5.CB other bump:2.73788 Ang H3.CE1 and F5.CB Number of specific fragments= 1 total=875 # 1ak4C.17.11 read from T0191.t2k.frag # found chain 1ak4C in template set T0191 17 :EHSFSPIMH 1ak4C 412 :HQAISPRTL Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.63159 Ang F5.CE1 and H10.CB other bump:2.76948 Ang F5.CE1 and H10.CA other bump:3.10634 Ang F5.CZ and H10.CA other bump:2.58227 Ang F5.CE1 and H10.N other bump:2.87315 Ang F5.CZ and H10.N other bump:3.26565 Ang F5.CZ and M9.C Number of specific fragments= 1 total=876 # 1efvA.17.11 read from T0191.t2k.frag # found chain 1efvA in template set T0191 17 :EHSFSPIMH 1efvA 30 :NDSLAPITL Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.92646 Ang F5.CE1 and M9.CE other bump:2.82031 Ang F5.CD1 and M9.CE other bump:2.23153 Ang F5.CE1 and M9.SD other bump:2.85233 Ang F5.CZ and M9.SD other bump:2.62243 Ang F5.CD1 and M9.SD other bump:2.72686 Ang F5.CE1 and M9.CB other bump:2.44448 Ang F5.CE2 and M9.CB other bump:1.82192 Ang F5.CZ and M9.CB other bump:3.12923 Ang F5.CZ and M9.CA neighbor-bump: 2.86176 Ang F5.CE2 and S6.O Number of specific fragments= 1 total=877 # 1hnr.17.20 read from T0191.t2k.frag # found chain 1hnr in template set T0191 17 :EHSFSPIMH 1hnr 110 :GQGRTPAVI Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang P7.C and I8.CG1 other bump:3.11774 Ang F5.CE2 and P7.CD other bump:2.79476 Ang F5.CE2 and P7.CG other bump:2.72349 Ang E2.OE2 and F5.CE1 neighbor-bump: 2.47831 Ang E2.CG and H3.N self-bump: 1.3132 Ang E2.CA and E2.CB Number of specific fragments= 1 total=878 # 1bkcA.17.21 read from T0191.t2k.frag # found chain 1bkcA in template set T0191 17 :EHSFSPIMH 1bkcA 240 :GRGEESTTT Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.6542 Ang E2.CD and M9.C other bump:2.25571 Ang E2.OE1 and M9.C other bump:2.7899 Ang E2.CB and M9.SD other bump:2.85179 Ang E2.CG and M9.SD other bump:3.13709 Ang E2.CA and M9.CG other bump:1.63029 Ang E2.CB and M9.CG other bump:1.55823 Ang E2.CG and M9.CG other bump:2.38381 Ang E2.CD and M9.CG other bump:2.51007 Ang E2.OE1 and M9.CG other bump:2.90396 Ang E2.CB and M9.CB other bump:2.09901 Ang E2.CG and M9.CB other bump:2.05062 Ang E2.CD and M9.CB other bump:2.01054 Ang E2.OE1 and M9.CB other bump:2.34319 Ang E2.OE2 and M9.CA other bump:3.31396 Ang E2.CB and M9.CA other bump:2.55208 Ang E2.CG and M9.CA other bump:1.51965 Ang E2.CD and M9.CA other bump:0.895127 Ang E2.OE1 and M9.CA other bump:2.46229 Ang E2.CD and M9.N other bump:1.2164 Ang E2.OE1 and M9.N other bump:3.15427 Ang E2.CD and I8.C other bump:2.02078 Ang E2.OE1 and I8.C neighbor-bump: 2.71095 Ang S6.OG and P7.CD Number of specific fragments= 1 total=879 # 1bkcE.17.21 read from T0191.t2k.frag # found chain 1bkcE in template set T0191 17 :EHSFSPIMH 1bkcE 240 :GRGEESTTT Fragment has 46 clashes (null) has 46 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.60325 Ang E2.OE2 and M9.C other bump:2.45083 Ang E2.CD and M9.C other bump:2.16274 Ang E2.OE1 and M9.C other bump:2.80935 Ang E2.CB and M9.SD other bump:2.87324 Ang E2.CG and M9.SD other bump:3.05243 Ang E2.CA and M9.CG other bump:1.55992 Ang E2.CB and M9.CG other bump:1.48685 Ang E2.CG and M9.CG other bump:2.38913 Ang E2.CD and M9.CG other bump:2.57019 Ang E2.OE1 and M9.CG other bump:2.80301 Ang E2.CB and M9.CB other bump:1.93966 Ang E2.CG and M9.CB other bump:1.94262 Ang E2.CD and M9.CB other bump:2.00438 Ang E2.OE1 and M9.CB other bump:2.10267 Ang E2.OE2 and M9.CA other bump:3.19909 Ang E2.CB and M9.CA other bump:2.37314 Ang E2.CG and M9.CA other bump:1.27981 Ang E2.CD and M9.CA other bump:0.829178 Ang E2.OE1 and M9.CA other bump:2.24952 Ang E2.CD and M9.N other bump:1.00002 Ang E2.OE1 and M9.N other bump:2.96032 Ang E2.CD and I8.C other bump:1.87962 Ang E2.OE1 and I8.C other bump:2.34739 Ang E2.OE1 and I8.O other bump:2.1065 Ang F5.CE2 and I8.CD1 other bump:2.40354 Ang F5.CZ and I8.CD1 other bump:3.03765 Ang F5.CE1 and I8.CG2 other bump:2.92132 Ang F5.CE2 and I8.CG2 other bump:2.24299 Ang F5.CZ and I8.CG2 other bump:3.16615 Ang F5.CD1 and I8.CG1 other bump:2.46989 Ang F5.CE1 and I8.CG1 other bump:2.11168 Ang F5.CD2 and I8.CG1 other bump:0.716703 Ang F5.CE2 and I8.CG1 other bump:1.16532 Ang F5.CZ and I8.CG1 other bump:2.67777 Ang F5.CE1 and I8.CB other bump:2.63475 Ang F5.CD2 and I8.CB other bump:1.66888 Ang F5.CE2 and I8.CB other bump:1.70717 Ang F5.CZ and I8.CB other bump:2.55918 Ang F5.CE2 and I8.CA other bump:3.16618 Ang F5.CZ and I8.CA other bump:2.75368 Ang F5.CD2 and I8.N other bump:2.66712 Ang F5.CE2 and I8.N neighbor-bump: 2.61031 Ang S6.OG and P7.CD other bump:2.5166 Ang E2.O and F5.CE1 other bump:3.11264 Ang H3.CB and F5.CE1 other bump:2.34764 Ang E2.O and F5.CD1 Number of specific fragments= 1 total=880 # 1kamA.18.19 read from T0191.t2k.frag # found chain 1kamA in template set T0191 18 :HSFSPIMHN 1kamA 15 :HNGHLLMAN Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.06911 Ang H2.C and P6.CD other bump:1.95387 Ang H2.O and P6.CD other bump:3.10144 Ang S3.C and P6.CD other bump:2.9502 Ang H2.ND1 and F4.CB other bump:2.73788 Ang H2.CE1 and F4.CB Number of specific fragments= 1 total=881 # 1hnr.18.21 read from T0191.t2k.frag # found chain 1hnr in template set T0191 18 :HSFSPIMHN 1hnr 111 :QGRTPAVIK Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang P6.C and I7.CG1 other bump:3.11774 Ang F4.CE2 and P6.CD other bump:2.79476 Ang F4.CE2 and P6.CG Number of specific fragments= 1 total=882 # 1ak4C.18.12 read from T0191.t2k.frag # found chain 1ak4C in template set T0191 18 :HSFSPIMHN 1ak4C 413 :QAISPRTLN Fragment has 23 clashes (null) has 23 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.72233 Ang F4.CB and H9.NE2 other bump:1.8986 Ang F4.CG and H9.NE2 other bump:1.69484 Ang F4.CD1 and H9.NE2 other bump:2.30381 Ang F4.CE1 and H9.NE2 other bump:2.88552 Ang F4.CZ and H9.NE2 other bump:2.57798 Ang F4.CD2 and H9.NE2 other bump:3.01312 Ang F4.CE2 and H9.NE2 other bump:2.87112 Ang F4.CD1 and H9.CE1 other bump:3.05183 Ang F4.CE1 and H9.CE1 other bump:3.14297 Ang F4.CD1 and H9.ND1 other bump:2.84695 Ang F4.CE1 and H9.ND1 other bump:2.13382 Ang F4.CG and H9.CD2 other bump:0.990869 Ang F4.CD1 and H9.CD2 other bump:1.1739 Ang F4.CE1 and H9.CD2 other bump:2.29262 Ang F4.CZ and H9.CD2 other bump:2.32405 Ang F4.CD1 and H9.CG other bump:1.79244 Ang F4.CE1 and H9.CG other bump:2.56641 Ang F4.CE1 and H9.CB other bump:2.76948 Ang F4.CE1 and H9.CA other bump:3.10634 Ang F4.CZ and H9.CA other bump:2.58227 Ang F4.CE1 and H9.N other bump:2.87314 Ang F4.CZ and H9.N other bump:3.26565 Ang F4.CZ and M8.C Number of specific fragments= 1 total=883 # 1bs9.18.19 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 18 :HSFSPIMHN 1bs9 20 :GSSSTVVNG Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.85215 Ang F4.CG and M8.CE other bump:1.52407 Ang F4.CD2 and M8.CE other bump:0.988439 Ang F4.CE2 and M8.CE other bump:2.33354 Ang F4.CZ and M8.CE other bump:2.12002 Ang F4.CD2 and M8.SD other bump:2.21292 Ang F4.CE2 and M8.SD other bump:2.53494 Ang F4.CE2 and M8.CG self-bump: 1.27383 Ang H2.CA and H2.CB Number of specific fragments= 1 total=884 # 1eulA.18.21 read from T0191.t2k.frag # found chain 1eulA in template set T0191 18 :HSFSPIMHN 1eulA 22 :TGLTPDQVK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.22609 Ang H2.O and S3.O Number of specific fragments= 1 total=885 # 1g66A.18.19 read from T0191.t2k.frag # found chain 1g66A in training set T0191 18 :HSFSPIMHN 1g66A 20 :GSSSTVVNG Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.94867 Ang F4.CG and M8.CE other bump:1.62055 Ang F4.CD2 and M8.CE other bump:1.00918 Ang F4.CE2 and M8.CE other bump:2.33936 Ang F4.CZ and M8.CE other bump:2.24156 Ang F4.CD2 and M8.SD other bump:2.29187 Ang F4.CE2 and M8.SD other bump:2.65309 Ang F4.CE2 and M8.CG other bump:2.59375 Ang S3.O and P6.CD self-bump: 1.29092 Ang H2.CA and H2.CB Number of specific fragments= 1 total=886 # 1kamA.19.20 read from T0191.t2k.frag # found chain 1kamA in template set T0191 19 :SFSPIMHNA 1kamA 16 :NGHLLMANE Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.95387 Ang G1.O and P5.CD other bump:3.06911 Ang G1.C and P5.CD other bump:3.10144 Ang S2.C and P5.CD Number of specific fragments= 1 total=887 # 1hnr.19.22 read from T0191.t2k.frag # found chain 1hnr in template set T0191 19 :SFSPIMHNA 1hnr 112 :GRTPAVIKK Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang P5.C and I6.CG1 other bump:3.11774 Ang F3.CE2 and P5.CD other bump:2.79476 Ang F3.CE2 and P5.CG Number of specific fragments= 1 total=888 # 1eulA.19.22 read from T0191.t2k.frag # found chain 1eulA in template set T0191 19 :SFSPIMHNA 1eulA 23 :GLTPDQVKR Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.22609 Ang G1.O and S2.O Number of specific fragments= 1 total=889 # 1bs9.19.20 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 19 :SFSPIMHNA 1bs9 21 :SSSTVVNGV Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.85215 Ang F3.CG and M7.CE other bump:1.52407 Ang F3.CD2 and M7.CE other bump:0.988439 Ang F3.CE2 and M7.CE other bump:2.33354 Ang F3.CZ and M7.CE other bump:2.12002 Ang F3.CD2 and M7.SD other bump:2.21292 Ang F3.CE2 and M7.SD other bump:2.53494 Ang F3.CE2 and M7.CG Number of specific fragments= 1 total=890 # 1g66A.19.20 read from T0191.t2k.frag # found chain 1g66A in training set T0191 19 :SFSPIMHNA 1g66A 21 :SSSTVVNGV Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.94867 Ang F3.CG and M7.CE other bump:1.62055 Ang F3.CD2 and M7.CE other bump:1.00918 Ang F3.CE2 and M7.CE other bump:2.33936 Ang F3.CZ and M7.CE other bump:2.24156 Ang F3.CD2 and M7.SD other bump:2.29187 Ang F3.CE2 and M7.SD other bump:2.65309 Ang F3.CE2 and M7.CG other bump:2.59375 Ang S2.O and P5.CD Number of specific fragments= 1 total=891 # 1dpgA.19.20 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 19 :SFSPIMHNA 1dpgA 21 :KLYPSVFNL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=892 # 1kamA.20.21 read from T0191.t2k.frag # found chain 1kamA in template set T0191 20 :FSPIMHNAA 1kamA 17 :GHLLMANEV Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.10144 Ang G1.C and P4.CD Number of specific fragments= 1 total=893 # 1hnr.20.23 read from T0191.t2k.frag # found chain 1hnr in template set T0191 20 :FSPIMHNAA 1hnr 113 :RTPAVIKKA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang P4.C and I5.CG1 other bump:3.11773 Ang F2.CE2 and P4.CD other bump:2.79475 Ang F2.CE2 and P4.CG Number of specific fragments= 1 total=894 # 1eulA.20.23 read from T0191.t2k.frag # found chain 1eulA in template set T0191 20 :FSPIMHNAA 1eulA 24 :LTPDQVKRH Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=895 # 1dpgA.20.21 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 20 :FSPIMHNAA 1dpgA 22 :LYPSVFNLY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=896 # 1bs9.20.21 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 20 :FSPIMHNAA 1bs9 22 :SSTVVNGVL Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.09197 Ang F2.CD2 and M6.CE other bump:2.30341 Ang F2.CE2 and M6.CE other bump:2.35364 Ang F2.CD2 and M6.SD other bump:2.90828 Ang F2.CE2 and M6.SD other bump:2.31643 Ang F2.CD2 and M6.CG other bump:2.29944 Ang F2.CE2 and M6.CG Number of specific fragments= 1 total=897 # 1g66A.20.21 read from T0191.t2k.frag # found chain 1g66A in training set T0191 20 :FSPIMHNAA 1g66A 22 :SSTVVNGVL Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.12412 Ang F2.CD2 and M6.CE other bump:2.2883 Ang F2.CE2 and M6.CE other bump:2.42477 Ang F2.CD2 and M6.SD other bump:2.94126 Ang F2.CE2 and M6.SD other bump:2.40615 Ang F2.CD2 and M6.CG other bump:2.37884 Ang F2.CE2 and M6.CG other bump:2.59375 Ang G1.O and P4.CD Number of specific fragments= 1 total=898 # 1kamA.21.22 read from T0191.t2k.frag # found chain 1kamA in template set T0191 21 :SPIMHNAAF 1kamA 18 :HLLMANEVL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=899 # 1hnr.21.24 read from T0191.t2k.frag # found chain 1hnr in template set T0191 21 :SPIMHNAAF 1hnr 114 :TPAVIKKAM Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang P3.C and I4.CG1 Number of specific fragments= 1 total=900 # 1eulA.21.24 read from T0191.t2k.frag # found chain 1eulA in template set T0191 21 :SPIMHNAAF 1eulA 25 :TPDQVKRHL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=901 # 1dpgA.21.22 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 21 :SPIMHNAAF 1dpgA 23 :YPSVFNLYK Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.7152 Ang H6.CD2 and F10.CZ other bump:2.13365 Ang H6.NE2 and F10.CZ other bump:2.97154 Ang H6.CE1 and F10.CZ other bump:3.07636 Ang H6.NE2 and F10.CE2 other bump:2.69141 Ang H6.NE2 and F10.CE1 other bump:2.92009 Ang H6.CE1 and F10.CE1 Number of specific fragments= 1 total=902 # 2dpg.21.22 read from T0191.t2k.frag # found chain 2dpg in template set T0191 21 :SPIMHNAAF 2dpg 23 :YPSVFNLYK Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.75452 Ang H6.CD2 and F10.CZ other bump:2.90423 Ang H6.CG and F10.CZ other bump:3.08136 Ang H6.ND1 and F10.CZ other bump:2.23252 Ang H6.CE1 and F10.CZ other bump:0.995341 Ang H6.NE2 and F10.CZ other bump:2.00509 Ang H6.CD2 and F10.CE2 other bump:2.16003 Ang H6.NE2 and F10.CE2 other bump:2.58716 Ang H6.CD2 and F10.CE1 other bump:3.117 Ang H6.ND1 and F10.CE1 other bump:2.17007 Ang H6.CE1 and F10.CE1 other bump:1.66248 Ang H6.NE2 and F10.CE1 Number of specific fragments= 1 total=903 # 1bs9.21.22 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 21 :SPIMHNAAF 1bs9 23 :STVVNGVLS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=904 # 1kamA.22.23 read from T0191.t2k.frag # found chain 1kamA in template set T0191 22 :PIMHNAAFK 1kamA 19 :LLMANEVLY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=905 # 1hnr.22.25 read from T0191.t2k.frag # found chain 1hnr in template set T0191 22 :PIMHNAAFK 1hnr 115 :PAVIKKAMD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang P2.C and I3.CG1 Number of specific fragments= 1 total=906 # 1dpgA.22.23 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 22 :PIMHNAAFK 1dpgA 24 :PSVFNLYKK Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.80978 Ang H5.NE2 and F9.CZ other bump:2.72442 Ang H5.CD2 and F9.CE1 other bump:2.61457 Ang H5.NE2 and F9.CE1 Number of specific fragments= 1 total=907 # 2dpg.22.23 read from T0191.t2k.frag # found chain 2dpg in template set T0191 22 :PIMHNAAFK 2dpg 24 :PSVFNLYKK Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.50836 Ang H5.CD2 and F9.CZ other bump:2.77442 Ang H5.CE1 and F9.CZ other bump:1.66746 Ang H5.NE2 and F9.CZ other bump:2.82963 Ang H5.NE2 and F9.CE2 other bump:2.84978 Ang H5.CG and F9.CE1 other bump:1.59707 Ang H5.CD2 and F9.CE1 other bump:2.88092 Ang H5.CE1 and F9.CE1 other bump:1.65572 Ang H5.NE2 and F9.CE1 other bump:2.52485 Ang H5.CD2 and F9.CD1 Number of specific fragments= 1 total=908 # 1eulA.22.25 read from T0191.t2k.frag # found chain 1eulA in template set T0191 22 :PIMHNAAFK 1eulA 26 :PDQVKRHLE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=909 # 1bs9.22.23 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 22 :PIMHNAAFK 1bs9 24 :TVVNGVLSA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=910 # 1kamA.23.24 read from T0191.t2k.frag # found chain 1kamA in template set T0191 23 :IMHNAAFKD 1kamA 20 :LMANEVLYQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=911 # 1hnr.23.26 read from T0191.t2k.frag # found chain 1hnr in template set T0191 23 :IMHNAAFKD 1hnr 116 :AVIKKAMDE Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.9662 Ang G1.C and I2.CG1 Number of specific fragments= 1 total=912 # 1dpgA.23.24 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 23 :IMHNAAFKD 1dpgA 25 :SVFNLYKKG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.80979 Ang H4.NE2 and F8.CZ other bump:2.72442 Ang H4.CD2 and F8.CE1 other bump:2.61458 Ang H4.NE2 and F8.CE1 Number of specific fragments= 1 total=913 # 2dpg.23.24 read from T0191.t2k.frag # found chain 2dpg in template set T0191 23 :IMHNAAFKD 2dpg 25 :SVFNLYKKG Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.50836 Ang H4.CD2 and F8.CZ other bump:2.77441 Ang H4.CE1 and F8.CZ other bump:1.66746 Ang H4.NE2 and F8.CZ other bump:2.82963 Ang H4.NE2 and F8.CE2 other bump:2.84978 Ang H4.CG and F8.CE1 other bump:1.59707 Ang H4.CD2 and F8.CE1 other bump:2.88092 Ang H4.CE1 and F8.CE1 other bump:1.65572 Ang H4.NE2 and F8.CE1 other bump:2.52485 Ang H4.CD2 and F8.CD1 Number of specific fragments= 1 total=914 # 1bs9.23.24 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 23 :IMHNAAFKD 1bs9 25 :VVNGVLSAY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=915 # 1g66A.23.24 read from T0191.t2k.frag # found chain 1g66A in training set T0191 23 :IMHNAAFKD 1g66A 25 :VVNGVLSAY Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.22448 Ang H4.ND1 and F8.CZ other bump:2.41093 Ang H4.O and F8.CE2 other bump:2.92118 Ang H4.C and F8.CE2 other bump:3.02773 Ang H4.CA and F8.CE2 other bump:2.89625 Ang H4.CB and F8.CE2 other bump:3.29156 Ang H4.ND1 and F8.CE2 other bump:1.73035 Ang H4.O and F8.CD2 other bump:2.69467 Ang H4.C and F8.CD2 Number of specific fragments= 1 total=916 # 1kamA.24.25 read from T0191.t2k.frag # found chain 1kamA in template set T0191 24 :MHNAAFKDK 1kamA 21 :MANEVLYQA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=917 # 1hnr.24.27 read from T0191.t2k.frag # found chain 1hnr in template set T0191 24 :MHNAAFKDK 1hnr 117 :VIKKAMDEQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=918 # 1dpgA.24.25 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 24 :MHNAAFKDK 1dpgA 26 :VFNLYKKGY Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.80979 Ang H3.NE2 and F7.CZ other bump:2.72442 Ang H3.CD2 and F7.CE1 other bump:2.61458 Ang H3.NE2 and F7.CE1 Number of specific fragments= 1 total=919 # 2dpg.24.25 read from T0191.t2k.frag # found chain 2dpg in template set T0191 24 :MHNAAFKDK 2dpg 26 :VFNLYKKGY Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.50835 Ang H3.CD2 and F7.CZ other bump:2.77441 Ang H3.CE1 and F7.CZ other bump:1.66745 Ang H3.NE2 and F7.CZ other bump:2.82962 Ang H3.NE2 and F7.CE2 other bump:2.84978 Ang H3.CG and F7.CE1 other bump:1.59706 Ang H3.CD2 and F7.CE1 other bump:2.88092 Ang H3.CE1 and F7.CE1 other bump:1.65572 Ang H3.NE2 and F7.CE1 other bump:2.52484 Ang H3.CD2 and F7.CD1 Number of specific fragments= 1 total=920 # 1bs9.24.25 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 24 :MHNAAFKDK 1bs9 26 :VNGVLSAYP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=921 # 1g66A.24.25 read from T0191.t2k.frag # found chain 1g66A in training set T0191 24 :MHNAAFKDK 1g66A 26 :VNGVLSAYP Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.22448 Ang H3.ND1 and F7.CZ other bump:3.02773 Ang H3.CA and F7.CE2 other bump:2.92118 Ang H3.C and F7.CE2 other bump:2.41093 Ang H3.O and F7.CE2 other bump:2.89624 Ang H3.CB and F7.CE2 other bump:3.29156 Ang H3.ND1 and F7.CE2 other bump:2.69467 Ang H3.C and F7.CD2 other bump:1.73035 Ang H3.O and F7.CD2 Number of specific fragments= 1 total=922 # 1kamA.25.26 read from T0191.t2k.frag # found chain 1kamA in template set T0191 25 :HNAAFKDKG 1kamA 22 :ANEVLYQAG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=923 # 1hnr.25.28 read from T0191.t2k.frag # found chain 1hnr in template set T0191 25 :HNAAFKDKG 1hnr 118 :IKKAMDEQG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=924 # 1bli.25.27 read from T0191.t2k.frag # found chain 1bli in template set T0191 25 :HNAAFKDKG 1bli 28 :DSAYLAEHG Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.96483 Ang A5.C and D8.OD1 other bump:1.59882 Ang A5.O and D8.OD1 other bump:2.22239 Ang A5.CA and D8.OD1 other bump:3.17303 Ang A5.C and D8.CG other bump:3.21123 Ang A5.CA and D8.CG Number of specific fragments= 1 total=925 # 1fdyA.25.29 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 25 :HNAAFKDKG 1fdyA 30 :LVQFNIQQG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.93634 Ang H2.CE1 and F6.CE2 other bump:2.58172 Ang H2.NE2 and F6.CE2 Number of specific fragments= 1 total=926 # 1dpgA.25.26 read from T0191.t2k.frag # found chain 1dpgA in template set T0191 25 :HNAAFKDKG 1dpgA 27 :FNLYKKGYL Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.80977 Ang H2.NE2 and F6.CZ other bump:2.72442 Ang H2.CD2 and F6.CE1 other bump:2.61456 Ang H2.NE2 and F6.CE1 Number of specific fragments= 1 total=927 # 1nal1.25.29 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 25 :HNAAFKDKG 1nal1 30 :LVQFNIQQG Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.00392 Ang H2.CE1 and F6.CZ other bump:2.93215 Ang H2.NE2 and F6.CZ other bump:2.97938 Ang H2.ND1 and F6.CE1 other bump:2.25217 Ang H2.CE1 and F6.CE1 other bump:2.53228 Ang H2.NE2 and F6.CE1 Number of specific fragments= 1 total=928 # 1kamA.26.27 read from T0191.t2k.frag # found chain 1kamA in template set T0191 26 :NAAFKDKGL 1kamA 23 :NEVLYQAGL Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.65539 Ang F5.CE1 and G11.CA other bump:2.79006 Ang F5.CE1 and G11.N other bump:2.58123 Ang F5.CE1 and L10.C other bump:2.19445 Ang F5.CE1 and L10.O other bump:2.64985 Ang F5.CZ and L10.O other bump:2.80951 Ang F5.CD1 and L10.O other bump:2.79199 Ang K8.NZ and L10.CD1 Number of specific fragments= 1 total=929 # 1bli.26.28 read from T0191.t2k.frag # found chain 1bli in template set T0191 26 :NAAFKDKGL 1bli 29 :SAYLAEHGI Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.96483 Ang A4.C and D7.OD1 other bump:1.59882 Ang A4.O and D7.OD1 other bump:2.22239 Ang A4.CA and D7.OD1 other bump:3.17303 Ang A4.C and D7.CG other bump:3.21123 Ang A4.CA and D7.CG Number of specific fragments= 1 total=930 # 1fdyA.26.30 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 26 :NAAFKDKGL 1fdyA 31 :VQFNIQQGI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=931 # 1nal1.26.30 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 26 :NAAFKDKGL 1nal1 31 :VQFNIQQGI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=932 # 1vjs.26.28 read from T0191.t2k.frag # found chain 1vjs in template set T0191 26 :NAAFKDKGL 1vjs 29 :SAYLAEHGI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.84549 Ang A3.C and D7.OD2 other bump:2.25807 Ang A3.O and D7.OD2 Number of specific fragments= 1 total=933 # 1bs9.26.27 read from T0191.t2k.frag # found chain 1bs9 in template set T0191 26 :NAAFKDKGL 1bs9 28 :GVLSAYPGS Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.10841 Ang D7.OD2 and L10.CD2 other bump:2.24864 Ang D7.CB and L10.CD1 other bump:2.64618 Ang D7.CG and L10.CD1 other bump:2.35055 Ang D7.OD2 and L10.CD1 other bump:2.95408 Ang D7.CB and L10.CG other bump:2.63463 Ang D7.CG and L10.CG other bump:2.0564 Ang D7.OD2 and L10.CG Number of specific fragments= 1 total=934 # 1kamA.27.28 read from T0191.t2k.frag # found chain 1kamA in template set T0191 27 :AAFKDKGLN 1kamA 24 :EVLYQAGLD Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.311 Ang F4.CE1 and N10.C other bump:2.99344 Ang F4.CZ and N10.C other bump:2.39458 Ang F4.CE1 and N10.O other bump:2.55681 Ang F4.CZ and N10.O other bump:2.65539 Ang F4.CE1 and N10.CA other bump:2.79006 Ang F4.CE1 and N10.N other bump:2.58123 Ang F4.CE1 and L9.C other bump:2.19445 Ang F4.CE1 and L9.O other bump:2.64985 Ang F4.CZ and L9.O other bump:2.80951 Ang F4.CD1 and L9.O other bump:2.79199 Ang K7.NZ and L9.CD1 Number of specific fragments= 1 total=935 # 1bli.27.29 read from T0191.t2k.frag # found chain 1bli in template set T0191 27 :AAFKDKGLN 1bli 30 :AYLAEHGIT Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.88127 Ang F4.CD2 and L9.CD1 other bump:2.75695 Ang F4.CB and L9.CD1 other bump:2.99885 Ang F4.CA and L9.CD1 other bump:1.96483 Ang A3.C and D6.OD1 other bump:2.22239 Ang A3.CA and D6.OD1 other bump:1.59882 Ang A3.O and D6.OD1 other bump:3.17303 Ang A3.C and D6.CG other bump:3.21123 Ang A3.CA and D6.CG Number of specific fragments= 1 total=936 # 1vjs.27.29 read from T0191.t2k.frag # found chain 1vjs in template set T0191 27 :AAFKDKGLN 1vjs 30 :AYLAEHGIT Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.25807 Ang A2.O and D6.OD2 other bump:2.84549 Ang A2.C and D6.OD2 Number of specific fragments= 1 total=937 # 1fdyA.27.31 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 27 :AAFKDKGLN 1fdyA 32 :QFNIQQGID Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.89651 Ang F4.CB and L9.CD1 other bump:2.87345 Ang F4.CD1 and L9.CD1 Number of specific fragments= 1 total=938 # 1nal1.27.31 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 27 :AAFKDKGLN 1nal1 32 :QFNIQQGID Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.62472 Ang F4.CD2 and L9.CD1 Number of specific fragments= 1 total=939 # 1nal3.27.31 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 27 :AAFKDKGLN 1nal3 32 :QFNIQQGID Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=940 # 1kamA.28.29 read from T0191.t2k.frag # found chain 1kamA in template set T0191 28 :AFKDKGLNY 1kamA 25 :VLYQAGLDE Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.311 Ang F3.CE1 and N9.C other bump:2.99344 Ang F3.CZ and N9.C other bump:2.39458 Ang F3.CE1 and N9.O other bump:2.55681 Ang F3.CZ and N9.O other bump:2.65539 Ang F3.CE1 and N9.CA other bump:2.79006 Ang F3.CE1 and N9.N other bump:2.58123 Ang F3.CE1 and L8.C other bump:2.19445 Ang F3.CE1 and L8.O other bump:2.64985 Ang F3.CZ and L8.O other bump:2.80951 Ang F3.CD1 and L8.O other bump:2.79199 Ang K6.NZ and L8.CD1 Number of specific fragments= 1 total=941 # 1bli.28.30 read from T0191.t2k.frag # found chain 1bli in template set T0191 28 :AFKDKGLNY 1bli 31 :YLAEHGITA Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.92585 Ang N9.OD1 and Y10.CE1 neighbor-bump: 2.26698 Ang N9.OD1 and Y10.CD1 other bump:2.88127 Ang F3.CD2 and L8.CD1 other bump:2.99885 Ang F3.CA and L8.CD1 other bump:2.75695 Ang F3.CB and L8.CD1 other bump:2.22239 Ang A2.CA and D5.OD1 other bump:1.59882 Ang A2.O and D5.OD1 other bump:1.96483 Ang A2.C and D5.OD1 other bump:3.21123 Ang A2.CA and D5.CG other bump:3.17303 Ang A2.C and D5.CG Number of specific fragments= 1 total=942 # 1vjs.28.30 read from T0191.t2k.frag # found chain 1vjs in template set T0191 28 :AFKDKGLNY 1vjs 31 :YLAEHGITA Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.80938 Ang N9.OD1 and Y10.CE1 neighbor-bump: 2.14264 Ang N9.OD1 and Y10.CD1 other bump:2.25807 Ang G1.O and D5.OD2 other bump:2.84549 Ang G1.C and D5.OD2 Number of specific fragments= 1 total=943 # 1fdyA.28.32 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 28 :AFKDKGLNY 1fdyA 33 :FNIQQGIDG Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.41911 Ang N9.O and Y10.CD1 neighbor-bump: 2.70784 Ang N9.C and Y10.CD1 neighbor-bump: 2.51947 Ang N9.O and Y10.CG other bump:2.89651 Ang F3.CB and L8.CD1 other bump:2.87345 Ang F3.CD1 and L8.CD1 Number of specific fragments= 1 total=944 # 1nal1.28.32 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 28 :AFKDKGLNY 1nal1 33 :FNIQQGIDG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.62472 Ang F3.CD2 and L8.CD1 Number of specific fragments= 1 total=945 # 1nal3.28.32 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 28 :AFKDKGLNY 1nal3 33 :FNIQQGIDG Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.62429 Ang N9.O and Y10.CE1 neighbor-bump: 2.59816 Ang N9.C and Y10.CD1 neighbor-bump: 2.15856 Ang N9.O and Y10.CD1 neighbor-bump: 2.85584 Ang N9.C and Y10.CG neighbor-bump: 2.26664 Ang N9.O and Y10.CG Number of specific fragments= 1 total=946 # 1kamA.29.30 read from T0191.t2k.frag # found chain 1kamA in template set T0191 29 :FKDKGLNYV 1kamA 26 :LYQAGLDEI Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.311 Ang F2.CE1 and N8.C other bump:2.99344 Ang F2.CZ and N8.C other bump:2.39458 Ang F2.CE1 and N8.O other bump:2.55682 Ang F2.CZ and N8.O other bump:2.65539 Ang F2.CE1 and N8.CA other bump:2.79006 Ang F2.CE1 and N8.N other bump:2.58123 Ang F2.CE1 and L7.C other bump:2.19445 Ang F2.CE1 and L7.O other bump:2.64985 Ang F2.CZ and L7.O other bump:2.80951 Ang F2.CD1 and L7.O other bump:2.79198 Ang K5.NZ and L7.CD1 Number of specific fragments= 1 total=947 # 1bli.29.31 read from T0191.t2k.frag # found chain 1bli in template set T0191 29 :FKDKGLNYV 1bli 32 :LAEHGITAV Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.92585 Ang N8.OD1 and Y9.CE1 neighbor-bump: 2.26698 Ang N8.OD1 and Y9.CD1 other bump:2.88127 Ang F2.CD2 and L7.CD1 other bump:2.99885 Ang F2.CA and L7.CD1 other bump:2.75696 Ang F2.CB and L7.CD1 other bump:1.59882 Ang G1.O and D4.OD1 other bump:1.96483 Ang G1.C and D4.OD1 other bump:3.17303 Ang G1.C and D4.CG Number of specific fragments= 1 total=948 # 1nal1.29.33 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 29 :FKDKGLNYV 1nal1 34 :NIQQGIDGL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.62471 Ang F2.CD2 and L7.CD1 Number of specific fragments= 1 total=949 # 1fdyA.29.33 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 29 :FKDKGLNYV 1fdyA 34 :NIQQGIDGL Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.41912 Ang N8.O and Y9.CD1 neighbor-bump: 2.70784 Ang N8.C and Y9.CD1 neighbor-bump: 2.51947 Ang N8.O and Y9.CG other bump:2.89651 Ang F2.CB and L7.CD1 other bump:2.87346 Ang F2.CD1 and L7.CD1 Number of specific fragments= 1 total=950 # 1vjs.29.31 read from T0191.t2k.frag # found chain 1vjs in template set T0191 29 :FKDKGLNYV 1vjs 32 :LAEHGITAV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.80938 Ang N8.OD1 and Y9.CE1 neighbor-bump: 2.14265 Ang N8.OD1 and Y9.CD1 Number of specific fragments= 1 total=951 # 1nal3.29.33 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 29 :FKDKGLNYV 1nal3 34 :NIQQGIDGL Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.62429 Ang N8.O and Y9.CE1 neighbor-bump: 2.59814 Ang N8.C and Y9.CD1 neighbor-bump: 2.15855 Ang N8.O and Y9.CD1 neighbor-bump: 2.85583 Ang N8.C and Y9.CG neighbor-bump: 2.26664 Ang N8.O and Y9.CG Number of specific fragments= 1 total=952 # 1kamA.30.31 read from T0191.t2k.frag # found chain 1kamA in template set T0191 30 :KDKGLNYVY 1kamA 27 :YQAGLDEIW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y8.CB and Y10.CE1 other bump:2.79197 Ang K4.NZ and L6.CD1 Number of specific fragments= 1 total=953 # 1nal1.30.34 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 30 :KDKGLNYVY 1nal1 35 :IQQGIDGLY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=954 # 1fdyA.30.34 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 30 :KDKGLNYVY 1fdyA 35 :IQQGIDGLY Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.41912 Ang N7.O and Y8.CD1 neighbor-bump: 2.70784 Ang N7.C and Y8.CD1 neighbor-bump: 2.51947 Ang N7.O and Y8.CG Number of specific fragments= 1 total=955 # 1bli.30.32 read from T0191.t2k.frag # found chain 1bli in template set T0191 30 :KDKGLNYVY 1bli 33 :AEHGITAVW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.92585 Ang N7.OD1 and Y8.CE1 neighbor-bump: 2.26698 Ang N7.OD1 and Y8.CD1 Number of specific fragments= 1 total=956 # 1nal3.30.34 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 30 :KDKGLNYVY 1nal3 35 :IQQGIDGLY Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.62429 Ang N7.O and Y8.CE1 neighbor-bump: 2.59814 Ang N7.C and Y8.CD1 neighbor-bump: 2.15855 Ang N7.O and Y8.CD1 neighbor-bump: 2.85583 Ang N7.C and Y8.CG neighbor-bump: 2.26664 Ang N7.O and Y8.CG Number of specific fragments= 1 total=957 # 1vjs.30.32 read from T0191.t2k.frag # found chain 1vjs in template set T0191 30 :KDKGLNYVY 1vjs 33 :AEHGITAVW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.80938 Ang N7.OD1 and Y8.CE1 neighbor-bump: 2.14265 Ang N7.OD1 and Y8.CD1 Number of specific fragments= 1 total=958 # 1kamA.31.32 read from T0191.t2k.frag # found chain 1kamA in template set T0191 31 :DKGLNYVYV 1kamA 28 :QAGLDEIWF Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y7.CB and Y9.CE1 other bump:2.79197 Ang K3.NZ and L5.CD1 Number of specific fragments= 1 total=959 # 1nal1.31.35 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 31 :DKGLNYVYV 1nal1 36 :QQGIDGLYV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=960 # 1fdyA.31.35 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 31 :DKGLNYVYV 1fdyA 36 :QQGIDGLYV Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.41912 Ang N6.O and Y7.CD1 neighbor-bump: 2.70784 Ang N6.C and Y7.CD1 neighbor-bump: 2.51947 Ang N6.O and Y7.CG Number of specific fragments= 1 total=961 # 1nal3.31.35 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 31 :DKGLNYVYV 1nal3 36 :QQGIDGLYV Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.62429 Ang N6.O and Y7.CE1 neighbor-bump: 2.59814 Ang N6.C and Y7.CD1 neighbor-bump: 2.15855 Ang N6.O and Y7.CD1 neighbor-bump: 2.85583 Ang N6.C and Y7.CG neighbor-bump: 2.26664 Ang N6.O and Y7.CG Number of specific fragments= 1 total=962 # 1bli.31.33 read from T0191.t2k.frag # found chain 1bli in template set T0191 31 :DKGLNYVYV 1bli 34 :EHGITAVWI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.92585 Ang N6.OD1 and Y7.CE1 neighbor-bump: 2.26698 Ang N6.OD1 and Y7.CD1 Number of specific fragments= 1 total=963 # 1vjs.31.33 read from T0191.t2k.frag # found chain 1vjs in template set T0191 31 :DKGLNYVYV 1vjs 34 :EHGITAVWI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.80938 Ang N6.OD1 and Y7.CE1 neighbor-bump: 2.14265 Ang N6.OD1 and Y7.CD1 Number of specific fragments= 1 total=964 # 1kamA.32.33 read from T0191.t2k.frag # found chain 1kamA in template set T0191 32 :KGLNYVYVA 1kamA 29 :AGLDEIWFM Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y6.CB and Y8.CE1 other bump:2.79198 Ang K2.NZ and L4.CD1 Number of specific fragments= 1 total=965 # 1fdyA.32.36 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 32 :KGLNYVYVA 1fdyA 37 :QGIDGLYVG Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.20946 Ang V9.O and A10.CB neighbor-bump: 2.46744 Ang V9.C and A10.CB neighbor-bump: 2.41912 Ang N5.O and Y6.CD1 neighbor-bump: 2.70784 Ang N5.C and Y6.CD1 neighbor-bump: 2.51947 Ang N5.O and Y6.CG Number of specific fragments= 1 total=966 # 1nal1.32.36 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 32 :KGLNYVYVA 1nal1 37 :QGIDGLYVG Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.12447 Ang V9.O and A10.CB neighbor-bump: 2.40027 Ang V9.C and A10.CB other bump:2.45943 Ang K2.CE and L4.CD1 other bump:2.37541 Ang K2.NZ and L4.CD1 other bump:2.89026 Ang K2.CE and L4.CG Number of specific fragments= 1 total=967 # 1nal3.32.36 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 32 :KGLNYVYVA 1nal3 37 :QGIDGLYVG Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.92706 Ang V9.O and A10.CB neighbor-bump: 2.29228 Ang V9.C and A10.CB neighbor-bump: 2.62429 Ang N5.O and Y6.CE1 neighbor-bump: 2.59814 Ang N5.C and Y6.CD1 neighbor-bump: 2.15855 Ang N5.O and Y6.CD1 neighbor-bump: 2.85583 Ang N5.C and Y6.CG neighbor-bump: 2.26664 Ang N5.O and Y6.CG Number of specific fragments= 1 total=968 # 1bli.32.34 read from T0191.t2k.frag # found chain 1bli in template set T0191 32 :KGLNYVYVA 1bli 35 :HGITAVWIP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.92585 Ang N5.OD1 and Y6.CE1 neighbor-bump: 2.26698 Ang N5.OD1 and Y6.CD1 Number of specific fragments= 1 total=969 # 1tahB.32.38 read from T0191.t2k.frag # found chain 1tahB in template set T0191 32 :KGLNYVYVA 1tahB 40 :HGAKVYVAN Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.64274 Ang L4.CB and Y6.OH other bump:1.88334 Ang L4.CG and Y6.OH other bump:0.634875 Ang L4.CD2 and Y6.OH other bump:2.34332 Ang L4.CB and Y6.CZ other bump:2.36727 Ang L4.CG and Y6.CZ other bump:1.88853 Ang L4.CD2 and Y6.CZ other bump:2.98933 Ang L4.CD2 and Y6.CE2 other bump:2.75785 Ang L4.CA and Y6.CE1 other bump:1.52517 Ang L4.CB and Y6.CE1 other bump:3.10908 Ang L4.C and Y6.CE1 other bump:2.4458 Ang L4.CG and Y6.CE1 other bump:2.63914 Ang L4.CD2 and Y6.CE1 other bump:2.5832 Ang L4.CB and Y6.CD1 Number of specific fragments= 1 total=970 # 1kamA.33.34 read from T0191.t2k.frag # found chain 1kamA in template set T0191 33 :GLNYVYVAF 1kamA 30 :GLDEIWFMP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y5.CB and Y7.CE1 Number of specific fragments= 1 total=971 # 1fdyA.33.37 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 33 :GLNYVYVAF 1fdyA 38 :GIDGLYVGG Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.69304 Ang Y7.O and F10.CE2 other bump:2.58209 Ang Y7.O and F10.CD2 other bump:3.07015 Ang Y7.CD2 and F10.CB other bump:2.96391 Ang Y7.CE2 and F10.CB neighbor-bump: 2.20944 Ang V8.O and A9.CB neighbor-bump: 2.46743 Ang V8.C and A9.CB neighbor-bump: 2.41912 Ang N4.O and Y5.CD1 neighbor-bump: 2.70784 Ang N4.C and Y5.CD1 neighbor-bump: 2.51947 Ang N4.O and Y5.CG Number of specific fragments= 1 total=972 # 1nal1.33.37 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 33 :GLNYVYVAF 1nal1 38 :GIDGLYVGG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.12448 Ang V8.O and A9.CB neighbor-bump: 2.40028 Ang V8.C and A9.CB Number of specific fragments= 1 total=973 # 1nal3.33.37 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 33 :GLNYVYVAF 1nal3 38 :GIDGLYVGG Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.92707 Ang V8.O and A9.CB neighbor-bump: 2.29229 Ang V8.C and A9.CB neighbor-bump: 2.62429 Ang N4.O and Y5.CE1 neighbor-bump: 2.59814 Ang N4.C and Y5.CD1 neighbor-bump: 2.15855 Ang N4.O and Y5.CD1 neighbor-bump: 2.85583 Ang N4.C and Y5.CG neighbor-bump: 2.26664 Ang N4.O and Y5.CG Number of specific fragments= 1 total=974 # 1cnzA.33.34 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 33 :GLNYVYVAF 1cnzA 35 :DMRITTSHY Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87938 Ang V8.CG1 and F10.CZ other bump:2.6686 Ang V8.CG1 and F10.CE2 other bump:2.64432 Ang L3.CD1 and Y5.OH other bump:2.69086 Ang L3.CD1 and Y5.CE1 other bump:2.25757 Ang L3.CB and Y5.CE1 other bump:2.84081 Ang L3.CB and Y5.CD1 Number of specific fragments= 1 total=975 # 1hg3A.33.35 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 33 :GLNYVYVAF 1hg3A 36 :KETGVTIVV Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.64773 Ang N4.O and Y5.CD1 neighbor-bump: 2.36582 Ang N4.ND2 and Y5.N self-bump: 1.39676 Ang N4.CA and N4.CB Number of specific fragments= 1 total=976 # 1fdyA.34.38 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 34 :LNYVYVAFD 1fdyA 39 :IDGLYVGGS Fragment has 40 clashes (null) has 40 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.24029 Ang Y6.CD1 and F9.CZ other bump:3.1394 Ang Y6.CA and F9.CZ other bump:2.26114 Ang Y6.CB and F9.CZ other bump:0.769124 Ang Y6.CG and F9.CZ other bump:1.88481 Ang Y6.CE1 and F9.CZ other bump:2.12077 Ang Y6.CZ and F9.CZ other bump:1.21751 Ang Y6.CD2 and F9.CZ other bump:1.86336 Ang Y6.CE2 and F9.CZ other bump:2.3766 Ang Y6.CD1 and F9.CE2 other bump:2.41092 Ang Y6.CA and F9.CE2 other bump:1.61873 Ang Y6.CB and F9.CE2 other bump:1.06341 Ang Y6.CG and F9.CE2 other bump:2.76369 Ang Y6.O and F9.CE2 other bump:2.57256 Ang Y6.C and F9.CE2 other bump:1.17665 Ang Y6.CD2 and F9.CE2 other bump:2.49797 Ang Y6.CE2 and F9.CE2 other bump:2.12034 Ang Y6.CD1 and F9.CE1 other bump:2.08484 Ang Y6.CG and F9.CE1 other bump:1.69851 Ang Y6.CE1 and F9.CE1 other bump:0.995199 Ang Y6.CZ and F9.CE1 other bump:2.26582 Ang Y6.OH and F9.CE1 other bump:1.52772 Ang Y6.CD2 and F9.CE1 other bump:0.835086 Ang Y6.CE2 and F9.CE1 other bump:2.79337 Ang Y6.CB and F9.CD2 other bump:2.33769 Ang Y6.CG and F9.CD2 other bump:2.96306 Ang Y6.C and F9.CD2 other bump:1.47496 Ang Y6.CD2 and F9.CD2 other bump:2.5065 Ang Y6.CE2 and F9.CD2 other bump:1.94083 Ang Y6.CZ and F9.CD1 other bump:2.67757 Ang Y6.OH and F9.CD1 other bump:1.75816 Ang Y6.CD2 and F9.CD1 other bump:0.840128 Ang Y6.CE2 and F9.CD1 other bump:3.05262 Ang Y6.CG and F9.CG other bump:1.76347 Ang Y6.CD2 and F9.CG other bump:1.89445 Ang Y6.CE2 and F9.CG neighbor-bump: 2.20944 Ang V7.O and A8.CB neighbor-bump: 2.46743 Ang V7.C and A8.CB neighbor-bump: 2.41912 Ang N3.O and Y4.CD1 neighbor-bump: 2.70784 Ang N3.C and Y4.CD1 neighbor-bump: 2.51947 Ang N3.O and Y4.CG Number of specific fragments= 1 total=977 # 1nal1.34.38 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 34 :LNYVYVAFD 1nal1 39 :IDGLYVGGS Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.81843 Ang Y6.CD1 and F9.CZ other bump:2.94588 Ang Y6.CA and F9.CZ other bump:1.96242 Ang Y6.CB and F9.CZ other bump:0.702756 Ang Y6.CG and F9.CZ other bump:3.24078 Ang Y6.C and F9.CZ other bump:2.48466 Ang Y6.CE1 and F9.CZ other bump:1.83137 Ang Y6.CE2 and F9.CZ other bump:2.46585 Ang Y6.CZ and F9.CZ other bump:0.710821 Ang Y6.CD2 and F9.CZ other bump:2.59856 Ang Y6.CA and F9.CE2 other bump:1.91714 Ang Y6.CB and F9.CE2 other bump:1.70495 Ang Y6.CG and F9.CE2 other bump:2.35345 Ang Y6.O and F9.CE2 other bump:2.42273 Ang Y6.C and F9.CE2 other bump:1.39009 Ang Y6.CD2 and F9.CE2 other bump:2.31412 Ang Y6.CD1 and F9.CE1 other bump:1.91824 Ang Y6.CG and F9.CE1 other bump:2.1325 Ang Y6.CE1 and F9.CE1 other bump:0.501981 Ang Y6.CE2 and F9.CE1 other bump:1.38865 Ang Y6.CZ and F9.CE1 other bump:2.57925 Ang Y6.OH and F9.CE1 other bump:1.02474 Ang Y6.CD2 and F9.CE1 other bump:2.92629 Ang Y6.CG and F9.CD2 other bump:2.63928 Ang Y6.O and F9.CD2 other bump:3.13365 Ang Y6.C and F9.CD2 other bump:1.98897 Ang Y6.CD2 and F9.CD2 other bump:0.992295 Ang Y6.CE2 and F9.CD1 other bump:2.23318 Ang Y6.CZ and F9.CD1 other bump:1.73628 Ang Y6.CD2 and F9.CD1 other bump:2.22198 Ang Y6.CE2 and F9.CG other bump:2.14169 Ang Y6.CD2 and F9.CG neighbor-bump: 2.12448 Ang V7.O and A8.CB neighbor-bump: 2.40028 Ang V7.C and A8.CB Number of specific fragments= 1 total=978 # 1nal3.34.38 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 34 :LNYVYVAFD 1nal3 39 :IDGLYVGGS Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.04195 Ang Y6.CB and F9.CZ other bump:2.10722 Ang Y6.CD1 and F9.CZ other bump:3.00978 Ang Y6.CA and F9.CZ other bump:3.26996 Ang Y6.C and F9.CZ other bump:0.940222 Ang Y6.CG and F9.CZ other bump:0.505622 Ang Y6.CD2 and F9.CZ other bump:1.81725 Ang Y6.CE2 and F9.CZ other bump:2.63442 Ang Y6.CZ and F9.CZ other bump:2.75735 Ang Y6.CE1 and F9.CZ other bump:2.08416 Ang Y6.CB and F9.CE2 other bump:2.72832 Ang Y6.CA and F9.CE2 other bump:2.31051 Ang Y6.O and F9.CE2 other bump:2.49147 Ang Y6.C and F9.CE2 other bump:1.95801 Ang Y6.CG and F9.CE2 other bump:1.49534 Ang Y6.CD2 and F9.CE2 other bump:2.57333 Ang Y6.CD1 and F9.CE1 other bump:2.05462 Ang Y6.CG and F9.CE1 other bump:0.970572 Ang Y6.CD2 and F9.CE1 other bump:0.464931 Ang Y6.CE2 and F9.CE1 other bump:1.65261 Ang Y6.CZ and F9.CE1 other bump:2.4396 Ang Y6.CE1 and F9.CE1 other bump:2.76899 Ang Y6.OH and F9.CE1 other bump:2.63648 Ang Y6.O and F9.CD2 other bump:2.22658 Ang Y6.CD2 and F9.CD2 other bump:1.89555 Ang Y6.CD2 and F9.CD1 other bump:1.29593 Ang Y6.CE2 and F9.CD1 other bump:2.57181 Ang Y6.CZ and F9.CD1 other bump:2.39439 Ang Y6.CD2 and F9.CG other bump:2.52459 Ang Y6.CE2 and F9.CG neighbor-bump: 1.92707 Ang V7.O and A8.CB neighbor-bump: 2.29229 Ang V7.C and A8.CB neighbor-bump: 2.62429 Ang N3.O and Y4.CE1 neighbor-bump: 2.59814 Ang N3.C and Y4.CD1 neighbor-bump: 2.15855 Ang N3.O and Y4.CD1 neighbor-bump: 2.85583 Ang N3.C and Y4.CG neighbor-bump: 2.26664 Ang N3.O and Y4.CG Number of specific fragments= 1 total=979 # 1kamA.34.35 read from T0191.t2k.frag # found chain 1kamA in template set T0191 34 :LNYVYVAFD 1kamA 31 :LDEIWFMPN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y4.CB and Y6.CE1 Number of specific fragments= 1 total=980 # 1cnzA.34.35 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 34 :LNYVYVAFD 1cnzA 36 :MRITTSHYD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87938 Ang V7.CG1 and F9.CZ other bump:2.6686 Ang V7.CG1 and F9.CE2 other bump:2.64433 Ang L2.CD1 and Y4.OH other bump:2.69086 Ang L2.CD1 and Y4.CE1 other bump:2.25758 Ang L2.CB and Y4.CE1 other bump:2.84081 Ang L2.CB and Y4.CD1 Number of specific fragments= 1 total=981 # 1cm7A.34.35 read from T0191.t2k.frag # found chain 1cm7A in template set T0191 34 :LNYVYVAFD 1cm7A 36 :MRITTSHYD Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11368 Ang V7.CG1 and F9.CZ other bump:2.86018 Ang V7.CG1 and F9.CE2 other bump:2.84915 Ang L2.CB and Y4.CE1 Number of specific fragments= 1 total=982 # 1fdyA.35.39 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 35 :NYVYVAFDV 1fdyA 40 :DGLYVGGST Fragment has 40 clashes (null) has 40 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.24029 Ang Y5.CD1 and F8.CZ other bump:3.1394 Ang Y5.CA and F8.CZ other bump:2.26114 Ang Y5.CB and F8.CZ other bump:0.769124 Ang Y5.CG and F8.CZ other bump:1.88481 Ang Y5.CE1 and F8.CZ other bump:2.12077 Ang Y5.CZ and F8.CZ other bump:1.21751 Ang Y5.CD2 and F8.CZ other bump:1.86336 Ang Y5.CE2 and F8.CZ other bump:2.3766 Ang Y5.CD1 and F8.CE2 other bump:2.41092 Ang Y5.CA and F8.CE2 other bump:1.61873 Ang Y5.CB and F8.CE2 other bump:1.06341 Ang Y5.CG and F8.CE2 other bump:2.76369 Ang Y5.O and F8.CE2 other bump:2.57256 Ang Y5.C and F8.CE2 other bump:1.17665 Ang Y5.CD2 and F8.CE2 other bump:2.49797 Ang Y5.CE2 and F8.CE2 other bump:2.12034 Ang Y5.CD1 and F8.CE1 other bump:2.08484 Ang Y5.CG and F8.CE1 other bump:1.69851 Ang Y5.CE1 and F8.CE1 other bump:0.995199 Ang Y5.CZ and F8.CE1 other bump:2.26582 Ang Y5.OH and F8.CE1 other bump:1.52772 Ang Y5.CD2 and F8.CE1 other bump:0.835086 Ang Y5.CE2 and F8.CE1 other bump:2.79337 Ang Y5.CB and F8.CD2 other bump:2.33769 Ang Y5.CG and F8.CD2 other bump:2.96306 Ang Y5.C and F8.CD2 other bump:1.47496 Ang Y5.CD2 and F8.CD2 other bump:2.5065 Ang Y5.CE2 and F8.CD2 other bump:1.94083 Ang Y5.CZ and F8.CD1 other bump:2.67757 Ang Y5.OH and F8.CD1 other bump:1.75816 Ang Y5.CD2 and F8.CD1 other bump:0.840128 Ang Y5.CE2 and F8.CD1 other bump:3.05262 Ang Y5.CG and F8.CG other bump:1.76347 Ang Y5.CD2 and F8.CG other bump:1.89445 Ang Y5.CE2 and F8.CG neighbor-bump: 2.20944 Ang V6.O and A7.CB neighbor-bump: 2.46743 Ang V6.C and A7.CB neighbor-bump: 2.41912 Ang N2.O and Y3.CD1 neighbor-bump: 2.70784 Ang N2.C and Y3.CD1 neighbor-bump: 2.51947 Ang N2.O and Y3.CG Number of specific fragments= 1 total=983 # 1nal1.35.39 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 35 :NYVYVAFDV 1nal1 40 :DGLYVGGST Fragment has 33 clashes (null) has 33 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:0.702756 Ang Y5.CG and F8.CZ other bump:1.81843 Ang Y5.CD1 and F8.CZ other bump:2.94588 Ang Y5.CA and F8.CZ other bump:1.96242 Ang Y5.CB and F8.CZ other bump:3.24078 Ang Y5.C and F8.CZ other bump:2.48466 Ang Y5.CE1 and F8.CZ other bump:1.83137 Ang Y5.CE2 and F8.CZ other bump:2.46585 Ang Y5.CZ and F8.CZ other bump:0.710821 Ang Y5.CD2 and F8.CZ other bump:1.70495 Ang Y5.CG and F8.CE2 other bump:2.59856 Ang Y5.CA and F8.CE2 other bump:1.91714 Ang Y5.CB and F8.CE2 other bump:2.35345 Ang Y5.O and F8.CE2 other bump:2.42273 Ang Y5.C and F8.CE2 other bump:1.39009 Ang Y5.CD2 and F8.CE2 other bump:1.91824 Ang Y5.CG and F8.CE1 other bump:2.31412 Ang Y5.CD1 and F8.CE1 other bump:2.1325 Ang Y5.CE1 and F8.CE1 other bump:0.501981 Ang Y5.CE2 and F8.CE1 other bump:1.38865 Ang Y5.CZ and F8.CE1 other bump:2.57925 Ang Y5.OH and F8.CE1 other bump:1.02474 Ang Y5.CD2 and F8.CE1 other bump:2.92629 Ang Y5.CG and F8.CD2 other bump:2.63928 Ang Y5.O and F8.CD2 other bump:3.13365 Ang Y5.C and F8.CD2 other bump:1.98897 Ang Y5.CD2 and F8.CD2 other bump:0.992295 Ang Y5.CE2 and F8.CD1 other bump:2.23318 Ang Y5.CZ and F8.CD1 other bump:1.73628 Ang Y5.CD2 and F8.CD1 other bump:2.22198 Ang Y5.CE2 and F8.CG other bump:2.14169 Ang Y5.CD2 and F8.CG neighbor-bump: 2.12448 Ang V6.O and A7.CB neighbor-bump: 2.40028 Ang V6.C and A7.CB Number of specific fragments= 1 total=984 # 1nal3.35.39 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 35 :NYVYVAFDV 1nal3 40 :DGLYVGGST Fragment has 37 clashes (null) has 37 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.04195 Ang Y5.CB and F8.CZ other bump:2.10722 Ang Y5.CD1 and F8.CZ other bump:3.00978 Ang Y5.CA and F8.CZ other bump:3.26996 Ang Y5.C and F8.CZ other bump:0.940222 Ang Y5.CG and F8.CZ other bump:0.505622 Ang Y5.CD2 and F8.CZ other bump:2.75735 Ang Y5.CE1 and F8.CZ other bump:1.81725 Ang Y5.CE2 and F8.CZ other bump:2.63442 Ang Y5.CZ and F8.CZ other bump:2.08416 Ang Y5.CB and F8.CE2 other bump:2.31051 Ang Y5.O and F8.CE2 other bump:2.72832 Ang Y5.CA and F8.CE2 other bump:2.49147 Ang Y5.C and F8.CE2 other bump:1.95801 Ang Y5.CG and F8.CE2 other bump:1.49534 Ang Y5.CD2 and F8.CE2 other bump:2.57333 Ang Y5.CD1 and F8.CE1 other bump:2.05462 Ang Y5.CG and F8.CE1 other bump:0.970572 Ang Y5.CD2 and F8.CE1 other bump:2.4396 Ang Y5.CE1 and F8.CE1 other bump:0.464931 Ang Y5.CE2 and F8.CE1 other bump:1.65261 Ang Y5.CZ and F8.CE1 other bump:2.76899 Ang Y5.OH and F8.CE1 other bump:2.63648 Ang Y5.O and F8.CD2 other bump:2.22658 Ang Y5.CD2 and F8.CD2 other bump:1.89555 Ang Y5.CD2 and F8.CD1 other bump:1.29593 Ang Y5.CE2 and F8.CD1 other bump:2.57181 Ang Y5.CZ and F8.CD1 other bump:2.39439 Ang Y5.CD2 and F8.CG other bump:2.52459 Ang Y5.CE2 and F8.CG neighbor-bump: 1.92707 Ang V6.O and A7.CB neighbor-bump: 2.29229 Ang V6.C and A7.CB neighbor-bump: 2.62429 Ang N2.O and Y3.CE1 neighbor-bump: 3.03225 Ang N2.CB and Y3.CD1 neighbor-bump: 2.15855 Ang N2.O and Y3.CD1 neighbor-bump: 2.59814 Ang N2.C and Y3.CD1 neighbor-bump: 2.26664 Ang N2.O and Y3.CG neighbor-bump: 2.85583 Ang N2.C and Y3.CG Number of specific fragments= 1 total=985 # 1kamA.35.36 read from T0191.t2k.frag # found chain 1kamA in template set T0191 35 :NYVYVAFDV 1kamA 32 :DEIWFMPNQ Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y3.CB and Y5.CE1 Number of specific fragments= 1 total=986 # 1cnzA.35.36 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 35 :NYVYVAFDV 1cnzA 37 :RITTSHYDV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87938 Ang V6.CG1 and F8.CZ other bump:2.6686 Ang V6.CG1 and F8.CE2 Number of specific fragments= 1 total=987 # 1cm7A.35.36 read from T0191.t2k.frag # found chain 1cm7A in template set T0191 35 :NYVYVAFDV 1cm7A 37 :RITTSHYDV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11368 Ang V6.CG1 and F8.CZ other bump:2.86018 Ang V6.CG1 and F8.CE2 Number of specific fragments= 1 total=988 # 1fdyA.36.40 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 36 :YVYVAFDVL 1fdyA 41 :GLYVGGSTG Fragment has 42 clashes (null) has 42 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.54787 Ang V5.CA and L10.CD1 other bump:2.48646 Ang V5.C and L10.CD1 other bump:1.76528 Ang A6.N and L10.CD1 other bump:2.90143 Ang A6.CA and L10.CD1 other bump:3.06713 Ang A6.N and L10.CG other bump:3.1394 Ang Y4.CA and F7.CZ other bump:2.26114 Ang Y4.CB and F7.CZ other bump:0.769124 Ang Y4.CG and F7.CZ other bump:1.24029 Ang Y4.CD1 and F7.CZ other bump:1.21751 Ang Y4.CD2 and F7.CZ other bump:1.88481 Ang Y4.CE1 and F7.CZ other bump:1.86336 Ang Y4.CE2 and F7.CZ other bump:2.12077 Ang Y4.CZ and F7.CZ other bump:2.41092 Ang Y4.CA and F7.CE2 other bump:1.61873 Ang Y4.CB and F7.CE2 other bump:1.06341 Ang Y4.CG and F7.CE2 other bump:2.3766 Ang Y4.CD1 and F7.CE2 other bump:1.17665 Ang Y4.CD2 and F7.CE2 other bump:2.57256 Ang Y4.C and F7.CE2 other bump:2.76369 Ang Y4.O and F7.CE2 other bump:2.49797 Ang Y4.CE2 and F7.CE2 other bump:2.08484 Ang Y4.CG and F7.CE1 other bump:2.12034 Ang Y4.CD1 and F7.CE1 other bump:1.52772 Ang Y4.CD2 and F7.CE1 other bump:1.69851 Ang Y4.CE1 and F7.CE1 other bump:0.835086 Ang Y4.CE2 and F7.CE1 other bump:0.995199 Ang Y4.CZ and F7.CE1 other bump:2.26582 Ang Y4.OH and F7.CE1 other bump:2.79337 Ang Y4.CB and F7.CD2 other bump:2.33769 Ang Y4.CG and F7.CD2 other bump:1.47496 Ang Y4.CD2 and F7.CD2 other bump:2.96306 Ang Y4.C and F7.CD2 other bump:2.5065 Ang Y4.CE2 and F7.CD2 other bump:1.75816 Ang Y4.CD2 and F7.CD1 other bump:0.840128 Ang Y4.CE2 and F7.CD1 other bump:1.94083 Ang Y4.CZ and F7.CD1 other bump:2.67757 Ang Y4.OH and F7.CD1 other bump:3.05262 Ang Y4.CG and F7.CG other bump:1.76347 Ang Y4.CD2 and F7.CG other bump:1.89445 Ang Y4.CE2 and F7.CG neighbor-bump: 2.20944 Ang V5.O and A6.CB neighbor-bump: 2.46743 Ang V5.C and A6.CB Number of specific fragments= 1 total=989 # 1nal1.36.40 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 36 :YVYVAFDVL 1nal1 41 :GLYVGGSTG Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.62739 Ang V5.CA and L10.CD1 other bump:2.60304 Ang V5.C and L10.CD1 other bump:1.89767 Ang A6.N and L10.CD1 other bump:3.01815 Ang A6.CA and L10.CD1 other bump:3.15265 Ang A6.N and L10.CG other bump:2.94588 Ang Y4.CA and F7.CZ other bump:1.96242 Ang Y4.CB and F7.CZ other bump:0.702756 Ang Y4.CG and F7.CZ other bump:1.81843 Ang Y4.CD1 and F7.CZ other bump:0.710821 Ang Y4.CD2 and F7.CZ other bump:3.24078 Ang Y4.C and F7.CZ other bump:2.48466 Ang Y4.CE1 and F7.CZ other bump:1.83137 Ang Y4.CE2 and F7.CZ other bump:2.46585 Ang Y4.CZ and F7.CZ other bump:2.59856 Ang Y4.CA and F7.CE2 other bump:1.91714 Ang Y4.CB and F7.CE2 other bump:1.70495 Ang Y4.CG and F7.CE2 other bump:1.39009 Ang Y4.CD2 and F7.CE2 other bump:2.42273 Ang Y4.C and F7.CE2 other bump:2.35345 Ang Y4.O and F7.CE2 other bump:1.91824 Ang Y4.CG and F7.CE1 other bump:2.31412 Ang Y4.CD1 and F7.CE1 other bump:1.02474 Ang Y4.CD2 and F7.CE1 other bump:2.1325 Ang Y4.CE1 and F7.CE1 other bump:0.501981 Ang Y4.CE2 and F7.CE1 other bump:1.38865 Ang Y4.CZ and F7.CE1 other bump:2.57925 Ang Y4.OH and F7.CE1 other bump:2.92629 Ang Y4.CG and F7.CD2 other bump:1.98897 Ang Y4.CD2 and F7.CD2 other bump:3.13365 Ang Y4.C and F7.CD2 other bump:2.63928 Ang Y4.O and F7.CD2 other bump:1.73628 Ang Y4.CD2 and F7.CD1 other bump:0.992295 Ang Y4.CE2 and F7.CD1 other bump:2.23318 Ang Y4.CZ and F7.CD1 other bump:2.14169 Ang Y4.CD2 and F7.CG other bump:2.22198 Ang Y4.CE2 and F7.CG neighbor-bump: 2.12448 Ang V5.O and A6.CB neighbor-bump: 2.40028 Ang V5.C and A6.CB Number of specific fragments= 1 total=990 # 1nal3.36.40 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 36 :YVYVAFDVL 1nal3 41 :GLYVGGSTG Fragment has 36 clashes (null) has 36 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.84585 Ang V5.CA and L10.CD1 other bump:2.64419 Ang V5.C and L10.CD1 other bump:1.72106 Ang A6.N and L10.CD1 other bump:2.72544 Ang A6.CA and L10.CD1 other bump:3.13405 Ang A6.N and L10.CG other bump:3.00978 Ang Y4.CA and F7.CZ other bump:2.04195 Ang Y4.CB and F7.CZ other bump:0.940222 Ang Y4.CG and F7.CZ other bump:2.10722 Ang Y4.CD1 and F7.CZ other bump:0.505622 Ang Y4.CD2 and F7.CZ other bump:2.75735 Ang Y4.CE1 and F7.CZ other bump:2.63442 Ang Y4.CZ and F7.CZ other bump:3.26996 Ang Y4.C and F7.CZ other bump:1.81725 Ang Y4.CE2 and F7.CZ other bump:2.72832 Ang Y4.CA and F7.CE2 other bump:2.08416 Ang Y4.CB and F7.CE2 other bump:1.95801 Ang Y4.CG and F7.CE2 other bump:1.49534 Ang Y4.CD2 and F7.CE2 other bump:2.31051 Ang Y4.O and F7.CE2 other bump:2.49147 Ang Y4.C and F7.CE2 other bump:2.05462 Ang Y4.CG and F7.CE1 other bump:2.57333 Ang Y4.CD1 and F7.CE1 other bump:0.970572 Ang Y4.CD2 and F7.CE1 other bump:2.4396 Ang Y4.CE1 and F7.CE1 other bump:1.65261 Ang Y4.CZ and F7.CE1 other bump:0.464931 Ang Y4.CE2 and F7.CE1 other bump:2.76899 Ang Y4.OH and F7.CE1 other bump:2.22658 Ang Y4.CD2 and F7.CD2 other bump:2.63648 Ang Y4.O and F7.CD2 other bump:1.89555 Ang Y4.CD2 and F7.CD1 other bump:2.57181 Ang Y4.CZ and F7.CD1 other bump:1.29593 Ang Y4.CE2 and F7.CD1 other bump:2.39439 Ang Y4.CD2 and F7.CG other bump:2.52459 Ang Y4.CE2 and F7.CG neighbor-bump: 1.92707 Ang V5.O and A6.CB neighbor-bump: 2.29229 Ang V5.C and A6.CB Number of specific fragments= 1 total=991 # 1kamA.36.37 read from T0191.t2k.frag # found chain 1kamA in template set T0191 36 :YVYVAFDVL 1kamA 33 :EIWFMPNQI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11471 Ang Y2.CB and Y4.CE1 Number of specific fragments= 1 total=992 # 1cm7A.36.37 read from T0191.t2k.frag # found chain 1cm7A in template set T0191 36 :YVYVAFDVL 1cm7A 38 :ITTSHYDVG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.31325 Ang L10.CA and L10.CB other bump:3.11368 Ang V5.CG1 and F7.CZ other bump:2.86018 Ang V5.CG1 and F7.CE2 Number of specific fragments= 1 total=993 # 1cnzA.36.37 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 36 :YVYVAFDVL 1cnzA 38 :ITTSHYDVG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.29004 Ang L10.CA and L10.CB other bump:2.87938 Ang V5.CG1 and F7.CZ other bump:2.66861 Ang V5.CG1 and F7.CE2 Number of specific fragments= 1 total=994 # 1cm7A.37.38 read from T0191.t2k.frag # found chain 1cm7A in template set T0191 37 :VYVAFDVLP 1cm7A 39 :TTSHYDVGG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.43252 Ang L9.CB and P10.CD self-bump: 1.31325 Ang L9.CA and L9.CB other bump:3.11369 Ang V4.CG1 and F6.CZ other bump:2.86018 Ang V4.CG1 and F6.CE2 Number of specific fragments= 1 total=995 # 1cnzA.37.38 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 37 :VYVAFDVLP 1cnzA 39 :TTSHYDVGG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.12877 Ang L9.CB and P10.CD self-bump: 1.29004 Ang L9.CA and L9.CB other bump:2.87939 Ang V4.CG1 and F6.CZ other bump:2.66861 Ang V4.CG1 and F6.CE2 Number of specific fragments= 1 total=996 # 1kamA.37.38 read from T0191.t2k.frag # found chain 1kamA in template set T0191 37 :VYVAFDVL 1kamA 34 :IWFMPNQI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=997 # 1fdyA.37.41 read from T0191.t2k.frag # found chain 1fdyA in template set T0191 37 :VYVAFDVLP 1fdyA 42 :LYVGGSTGE Fragment has 43 clashes (null) has 43 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.57325 Ang V4.CA and L9.CD1 other bump:2.39501 Ang V4.C and L9.CD1 other bump:1.65605 Ang A5.N and L9.CD1 other bump:3.00149 Ang F6.N and L9.CD1 other bump:2.74279 Ang A5.CA and L9.CD1 other bump:3.01811 Ang A5.N and L9.CG other bump:3.1394 Ang Y3.CA and F6.CZ other bump:2.26114 Ang Y3.CB and F6.CZ other bump:0.769124 Ang Y3.CG and F6.CZ other bump:1.24029 Ang Y3.CD1 and F6.CZ other bump:1.21751 Ang Y3.CD2 and F6.CZ other bump:1.88481 Ang Y3.CE1 and F6.CZ other bump:1.86336 Ang Y3.CE2 and F6.CZ other bump:2.12077 Ang Y3.CZ and F6.CZ other bump:2.41092 Ang Y3.CA and F6.CE2 other bump:1.61873 Ang Y3.CB and F6.CE2 other bump:1.06341 Ang Y3.CG and F6.CE2 other bump:2.3766 Ang Y3.CD1 and F6.CE2 other bump:2.57256 Ang Y3.C and F6.CE2 other bump:2.76369 Ang Y3.O and F6.CE2 other bump:1.17665 Ang Y3.CD2 and F6.CE2 other bump:2.49797 Ang Y3.CE2 and F6.CE2 other bump:2.08484 Ang Y3.CG and F6.CE1 other bump:2.12034 Ang Y3.CD1 and F6.CE1 other bump:1.52772 Ang Y3.CD2 and F6.CE1 other bump:1.69851 Ang Y3.CE1 and F6.CE1 other bump:0.835086 Ang Y3.CE2 and F6.CE1 other bump:0.995199 Ang Y3.CZ and F6.CE1 other bump:2.26582 Ang Y3.OH and F6.CE1 other bump:2.79337 Ang Y3.CB and F6.CD2 other bump:2.33769 Ang Y3.CG and F6.CD2 other bump:2.96306 Ang Y3.C and F6.CD2 other bump:1.47496 Ang Y3.CD2 and F6.CD2 other bump:2.5065 Ang Y3.CE2 and F6.CD2 other bump:1.75816 Ang Y3.CD2 and F6.CD1 other bump:0.840128 Ang Y3.CE2 and F6.CD1 other bump:1.94083 Ang Y3.CZ and F6.CD1 other bump:2.67757 Ang Y3.OH and F6.CD1 other bump:3.05262 Ang Y3.CG and F6.CG other bump:1.76347 Ang Y3.CD2 and F6.CG other bump:1.89445 Ang Y3.CE2 and F6.CG neighbor-bump: 2.20944 Ang V4.O and A5.CB neighbor-bump: 2.46743 Ang V4.C and A5.CB Number of specific fragments= 1 total=998 # 1nal3.37.41 read from T0191.t2k.frag # found chain 1nal3 in template set T0191 37 :VYVAFDVLP 1nal3 42 :LYVGGSTGE Fragment has 37 clashes (null) has 37 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.88892 Ang V4.CA and L9.CD1 other bump:2.57544 Ang V4.C and L9.CD1 other bump:1.6163 Ang A5.N and L9.CD1 other bump:2.5579 Ang A5.CA and L9.CD1 other bump:2.76726 Ang F6.N and L9.CD1 other bump:3.07938 Ang A5.N and L9.CG other bump:2.04195 Ang Y3.CB and F6.CZ other bump:2.10722 Ang Y3.CD1 and F6.CZ other bump:3.00978 Ang Y3.CA and F6.CZ other bump:3.26996 Ang Y3.C and F6.CZ other bump:0.940222 Ang Y3.CG and F6.CZ other bump:0.505622 Ang Y3.CD2 and F6.CZ other bump:2.75735 Ang Y3.CE1 and F6.CZ other bump:1.81725 Ang Y3.CE2 and F6.CZ other bump:2.63442 Ang Y3.CZ and F6.CZ other bump:2.08416 Ang Y3.CB and F6.CE2 other bump:2.72832 Ang Y3.CA and F6.CE2 other bump:2.31051 Ang Y3.O and F6.CE2 other bump:2.49147 Ang Y3.C and F6.CE2 other bump:1.95801 Ang Y3.CG and F6.CE2 other bump:1.49534 Ang Y3.CD2 and F6.CE2 other bump:2.57333 Ang Y3.CD1 and F6.CE1 other bump:2.05462 Ang Y3.CG and F6.CE1 other bump:0.970572 Ang Y3.CD2 and F6.CE1 other bump:2.4396 Ang Y3.CE1 and F6.CE1 other bump:0.464931 Ang Y3.CE2 and F6.CE1 other bump:1.65261 Ang Y3.CZ and F6.CE1 other bump:2.76899 Ang Y3.OH and F6.CE1 other bump:2.63648 Ang Y3.O and F6.CD2 other bump:2.22658 Ang Y3.CD2 and F6.CD2 other bump:1.89555 Ang Y3.CD2 and F6.CD1 other bump:1.29593 Ang Y3.CE2 and F6.CD1 other bump:2.57181 Ang Y3.CZ and F6.CD1 other bump:2.39439 Ang Y3.CD2 and F6.CG other bump:2.52459 Ang Y3.CE2 and F6.CG neighbor-bump: 1.92707 Ang V4.O and A5.CB neighbor-bump: 2.29229 Ang V4.C and A5.CB Number of specific fragments= 1 total=999 # 1nal1.37.41 read from T0191.t2k.frag # found chain 1nal1 in template set T0191 37 :VYVAFDVLP 1nal1 42 :LYVGGSTGE Fragment has 38 clashes (null) has 38 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.6468 Ang V4.CA and L9.CD1 other bump:2.49844 Ang V4.C and L9.CD1 other bump:1.7774 Ang A5.N and L9.CD1 other bump:2.84848 Ang A5.CA and L9.CD1 other bump:3.09401 Ang A5.N and L9.CG other bump:2.94588 Ang Y3.CA and F6.CZ other bump:1.96242 Ang Y3.CB and F6.CZ other bump:0.702756 Ang Y3.CG and F6.CZ other bump:1.81843 Ang Y3.CD1 and F6.CZ other bump:3.24078 Ang Y3.C and F6.CZ other bump:0.710821 Ang Y3.CD2 and F6.CZ other bump:2.48466 Ang Y3.CE1 and F6.CZ other bump:1.83137 Ang Y3.CE2 and F6.CZ other bump:2.46585 Ang Y3.CZ and F6.CZ other bump:2.59856 Ang Y3.CA and F6.CE2 other bump:1.91714 Ang Y3.CB and F6.CE2 other bump:1.70495 Ang Y3.CG and F6.CE2 other bump:2.42273 Ang Y3.C and F6.CE2 other bump:2.35345 Ang Y3.O and F6.CE2 other bump:1.39009 Ang Y3.CD2 and F6.CE2 other bump:1.91824 Ang Y3.CG and F6.CE1 other bump:2.31412 Ang Y3.CD1 and F6.CE1 other bump:1.02474 Ang Y3.CD2 and F6.CE1 other bump:2.1325 Ang Y3.CE1 and F6.CE1 other bump:0.501981 Ang Y3.CE2 and F6.CE1 other bump:1.38865 Ang Y3.CZ and F6.CE1 other bump:2.57925 Ang Y3.OH and F6.CE1 other bump:2.92629 Ang Y3.CG and F6.CD2 other bump:3.13365 Ang Y3.C and F6.CD2 other bump:2.63928 Ang Y3.O and F6.CD2 other bump:1.98897 Ang Y3.CD2 and F6.CD2 other bump:1.73628 Ang Y3.CD2 and F6.CD1 other bump:0.992295 Ang Y3.CE2 and F6.CD1 other bump:2.23318 Ang Y3.CZ and F6.CD1 other bump:2.14169 Ang Y3.CD2 and F6.CG other bump:2.22198 Ang Y3.CE2 and F6.CG neighbor-bump: 2.12448 Ang V4.O and A5.CB neighbor-bump: 2.40028 Ang V4.C and A5.CB Number of specific fragments= 1 total=1000 # 1hg3A.38.40 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 38 :YVAFDVLPE 1hg3A 41 :TIVVAPQLV Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.65364 Ang L8.CD1 and E10.OE2 other bump:2.53537 Ang F5.CZ and V7.CG1 other bump:2.60252 Ang F5.CD2 and V7.CG1 other bump:1.60308 Ang F5.CE2 and V7.CG1 other bump:2.99591 Ang F5.CE2 and V7.CB Number of specific fragments= 1 total=1001 # 1cm7A.38.39 read from T0191.t2k.frag # found chain 1cm7A in template set T0191 38 :YVAFDVLPE 1cm7A 40 :TSHYDVGGA Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.43252 Ang L8.CB and P9.CD self-bump: 1.31325 Ang L8.CA and L8.CB other bump:3.11368 Ang V3.CG1 and F5.CZ other bump:2.86018 Ang V3.CG1 and F5.CE2 Number of specific fragments= 1 total=1002 # 1cnzA.38.39 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 38 :YVAFDVLPE 1cnzA 40 :TSHYDVGGI Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.12878 Ang L8.CB and P9.CD self-bump: 1.29004 Ang L8.CA and L8.CB other bump:2.87938 Ang V3.CG1 and F5.CZ other bump:2.66861 Ang V3.CG1 and F5.CE2 Number of specific fragments= 1 total=1003 # 1alq.38.41 read from T0191.t2k.frag # found chain 1alq in template set T0191 42 :DVLPE 1alq 298 :AKELN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues Number of specific fragments= 1 total=1004 # 1kamA.38.39 read from T0191.t2k.frag # found chain 1kamA in template set T0191 38 :YVAFDVL 1kamA 35 :WFMPNQI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues Number of specific fragments= 1 total=1005 # 1bvh.38.40 read from T0191.t2k.frag # found chain 1bvh in template set T0191 38 :YVAFDVLPE 1bvh 41 :IDSGAVSDW Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.39544 Ang D6.CA and D6.CB Number of specific fragments= 1 total=1006 # 1hg3A.39.41 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 39 :VAFDVLPEN 1hg3A 42 :IVVAPQLVD Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.13796 Ang V6.CG2 and G11.CA other bump:2.65364 Ang L7.CD1 and E9.OE2 other bump:2.60252 Ang F4.CD2 and V6.CG1 other bump:1.60308 Ang F4.CE2 and V6.CG1 other bump:2.53537 Ang F4.CZ and V6.CG1 other bump:2.99591 Ang F4.CE2 and V6.CB Number of specific fragments= 1 total=1007 # 1cby.39.44 read from T0191.t2k.frag # found chain 1cby in template set T0191 39 :VAFDVLPEN 1cby 45 :TVFYVQPQY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1008 # 1alq.39.42 read from T0191.t2k.frag # found chain 1alq in template set T0191 42 :DVLPEN 1alq 298 :AKELND Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues Number of specific fragments= 1 total=1009 # 1cm7A.39.40 read from T0191.t2k.frag # found chain 1cm7A in template set T0191 39 :VAFDVLPEN 1cm7A 41 :SHYDVGGAA Fragment has 13 clashes (null) has 13 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.74917 Ang D5.CA and N10.OD1 other bump:1.78784 Ang D5.CB and N10.OD1 other bump:2.72156 Ang D5.C and N10.OD1 other bump:2.23775 Ang D5.C and N10.ND2 other bump:1.74244 Ang D5.O and N10.ND2 other bump:3.21125 Ang D5.CA and N10.CG other bump:2.74227 Ang D5.CB and N10.CG other bump:2.55059 Ang D5.C and N10.CG other bump:2.86592 Ang V6.N and N10.CG neighbor-bump: 2.43252 Ang L7.CB and P8.CD self-bump: 1.31325 Ang L7.CA and L7.CB other bump:3.11369 Ang V2.CG1 and F4.CZ other bump:2.86018 Ang V2.CG1 and F4.CE2 Number of specific fragments= 1 total=1010 # 1eaf.39.42 read from T0191.t2k.frag # found chain 1eaf in template set T0191 39 :VAFDVLPEN 1eaf 437 :QFESADITE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1011 # 1cnzA.39.40 read from T0191.t2k.frag # found chain 1cnzA in template set T0191 39 :VAFDVLPEN 1cnzA 41 :SHYDVGGIA Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.12878 Ang L7.CB and P8.CD self-bump: 1.29004 Ang L7.CA and L7.CB other bump:2.87939 Ang V2.CG1 and F4.CZ other bump:2.66861 Ang V2.CG1 and F4.CE2 Number of specific fragments= 1 total=1012 # 1cby.40.45 read from T0191.t2k.frag # found chain 1cby in template set T0191 40 :AFDVLPENL 1cby 46 :VFYVQPQYI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1013 # 1hg3A.40.42 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 40 :AFDVLPENL 1hg3A 43 :VVAPQLVDL Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.13796 Ang V5.CG2 and L10.CA other bump:2.65364 Ang L6.CD1 and E8.OE2 other bump:2.53537 Ang F3.CZ and V5.CG1 other bump:2.60252 Ang F3.CD2 and V5.CG1 other bump:1.60308 Ang F3.CE2 and V5.CG1 other bump:2.99591 Ang F3.CE2 and V5.CB Number of specific fragments= 1 total=1014 # 1alq.40.43 read from T0191.t2k.frag # found chain 1alq in template set T0191 42 :DVLPENL 1alq 298 :AKELNDL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues Number of specific fragments= 1 total=1015 # 1eaf.40.43 read from T0191.t2k.frag # found chain 1eaf in template set T0191 40 :AFDVLPENL 1eaf 438 :FESADITEL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1016 # 1eps.40.41 read from T0191.t2k.frag # found chain 1eps in template set Number of specific fragments= 0 total=1016 # 1g6sA.40.41 read from T0191.t2k.frag # found chain 1g6sA in training set T0191 40 :AFDVLPENL 1g6sA 42 :TNLLDSDDV Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.85382 Ang V5.O and L10.CD2 other bump:3.05845 Ang V5.C and L10.CD2 other bump:2.73665 Ang V5.CG1 and P7.CD neighbor-bump: 1.78613 Ang L6.C and P7.CD other bump:2.52781 Ang V5.C and P7.CD neighbor-bump: 2.42592 Ang L6.N and P7.CD neighbor-bump: 2.33192 Ang L6.CA and P7.CD other bump:2.64091 Ang V5.CG1 and P7.CG Number of specific fragments= 1 total=1017 # 1alq.41.44 read from T0191.t2k.frag # found chain 1alq in template set T0191 42 :DVLPENLK 1alq 298 :AKELNDLE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=1018 # 1cby.41.46 read from T0191.t2k.frag # found chain 1cby in template set T0191 41 :FDVLPENLK 1cby 47 :FYVQPQYIN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1019 # 1hg3A.41.43 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 41 :FDVLPENLK 1hg3A 44 :VAPQLVDLR Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.13798 Ang V4.CG2 and L9.CA other bump:2.65364 Ang L5.CD1 and E7.OE2 other bump:2.6025 Ang F2.CD2 and V4.CG1 other bump:1.60306 Ang F2.CE2 and V4.CG1 other bump:2.53534 Ang F2.CZ and V4.CG1 other bump:2.99589 Ang F2.CE2 and V4.CB Number of specific fragments= 1 total=1020 # 1eps.41.42 read from T0191.t2k.frag # found chain 1eps in template set Number of specific fragments= 0 total=1020 # 1g6sA.41.42 read from T0191.t2k.frag # found chain 1g6sA in training set T0191 41 :FDVLPENLK 1g6sA 43 :NLLDSDDVR Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56925 Ang V4.CB and L9.CD1 other bump:2.22335 Ang V4.O and L9.CD1 other bump:2.73665 Ang V4.CG1 and P6.CD neighbor-bump: 1.78613 Ang L5.C and P6.CD other bump:2.52781 Ang V4.C and P6.CD neighbor-bump: 2.42592 Ang L5.N and P6.CD neighbor-bump: 2.33192 Ang L5.CA and P6.CD other bump:2.64091 Ang V4.CG1 and P6.CG Number of specific fragments= 1 total=1021 # 1eaf.41.44 read from T0191.t2k.frag # found chain 1eaf in template set T0191 41 :FDVLPENLK 1eaf 439 :ESADITELE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1022 # 1alq.42.45 read from T0191.t2k.frag # found chain 1alq in template set T0191 42 :DVLPENLKY 1alq 298 :AKELNDLEK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1023 # 1eps.42.43 read from T0191.t2k.frag # found chain 1eps in template set Number of specific fragments= 0 total=1023 # 1cby.42.47 read from T0191.t2k.frag # found chain 1cby in template set T0191 42 :DVLPENLKY 1cby 48 :YVQPQYINQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1024 # 1hg3A.42.44 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 42 :DVLPENLKY 1hg3A 45 :APQLVDLRM Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.13798 Ang V3.CG2 and L8.CA other bump:2.65364 Ang L4.CD1 and E6.OE2 Number of specific fragments= 1 total=1025 # 1g6sA.42.43 read from T0191.t2k.frag # found chain 1g6sA in training set T0191 42 :DVLPENLKY 1g6sA 44 :LLDSDDVRH Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56925 Ang V3.CB and L8.CD1 other bump:2.22335 Ang V3.O and L8.CD1 other bump:2.73665 Ang V3.CG1 and P5.CD other bump:2.52781 Ang V3.C and P5.CD neighbor-bump: 2.42592 Ang L4.N and P5.CD neighbor-bump: 2.33192 Ang L4.CA and P5.CD neighbor-bump: 1.78613 Ang L4.C and P5.CD other bump:2.64091 Ang V3.CG1 and P5.CG Number of specific fragments= 1 total=1026 # 1dbqA.42.45 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 42 :DVLPENLKY 1dbqA 98 :WNNLEKQRA Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59237 Ang P5.O and K9.CB neighbor-bump: 2.12281 Ang D2.O and V3.CG2 neighbor-bump: 2.60004 Ang D2.C and V3.CG2 neighbor-bump: 1.85724 Ang D2.O and V3.CB neighbor-bump: 2.35959 Ang D2.C and V3.CB neighbor-bump: 2.31937 Ang G1.O and D2.CB neighbor-bump: 2.53041 Ang G1.C and D2.CB Number of specific fragments= 1 total=1027 # 1alq.43.46 read from T0191.t2k.frag # found chain 1alq in template set T0191 43 :VLPENLKYV 1alq 31 :KELNDLEKK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1028 # 1eps.43.44 read from T0191.t2k.frag # found chain 1eps in template set Number of specific fragments= 0 total=1028 # 1g6sA.43.44 read from T0191.t2k.frag # found chain 1g6sA in training set T0191 43 :VLPENLKYV 1g6sA 45 :LDSDDVRHM Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.65348 Ang V2.CB and L7.CD1 other bump:2.22335 Ang V2.O and L7.CD1 other bump:2.7661 Ang V2.CG1 and P4.CD neighbor-bump: 2.33193 Ang L3.CA and P4.CD neighbor-bump: 1.78614 Ang L3.C and P4.CD other bump:2.52781 Ang V2.C and P4.CD neighbor-bump: 2.42592 Ang L3.N and P4.CD other bump:2.71634 Ang V2.CG1 and P4.CG Number of specific fragments= 1 total=1029 # 1dbqA.43.46 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 43 :VLPENLKYV 1dbqA 99 :NNLEKQRAY Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59237 Ang P4.O and K8.CB neighbor-bump: 2.12282 Ang G1.O and V2.CG2 neighbor-bump: 2.60004 Ang G1.C and V2.CG2 neighbor-bump: 1.85725 Ang G1.O and V2.CB neighbor-bump: 2.35959 Ang G1.C and V2.CB Number of specific fragments= 1 total=1030 # 1hg3A.43.45 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 43 :VLPENLKYV 1hg3A 46 :PQLVDLRMI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.05298 Ang V2.CG2 and L7.CA other bump:2.65364 Ang L3.CD1 and E5.OE2 Number of specific fragments= 1 total=1031 # 5ukdA.43.46 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 43 :VLPENLKYV 5ukdA 47 :SGSKDGEMI Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.95555 Ang L3.CD1 and K8.NZ other bump:1.91765 Ang P4.CG and L7.CD2 other bump:1.9081 Ang P4.CD and L7.CD2 other bump:2.57963 Ang L3.N and L7.CD1 other bump:1.50402 Ang L3.CA and L7.CD1 other bump:2.46972 Ang L3.CB and L7.CD1 other bump:1.66049 Ang L3.C and L7.CD1 other bump:1.6046 Ang P4.CD and L7.CD1 other bump:2.95261 Ang P4.CA and L7.CD1 other bump:1.63588 Ang P4.N and L7.CD1 other bump:3.0046 Ang L3.CA and L7.CG other bump:2.8963 Ang L3.C and L7.CG other bump:1.83602 Ang P4.CG and L7.CG other bump:1.65887 Ang P4.CD and L7.CG other bump:3.01274 Ang P4.CA and L7.CG other bump:2.98123 Ang P4.CB and L7.CG other bump:3.22244 Ang P4.C and L7.CG other bump:2.23357 Ang P4.N and L7.CG other bump:3.1796 Ang P4.CD and L7.CB other bump:2.4202 Ang V2.O and P4.CD other bump:2.04668 Ang G1.O and L3.CD2 other bump:3.09935 Ang G1.C and L3.CD2 Number of specific fragments= 1 total=1032 # 1alq.44.47 read from T0191.t2k.frag # found chain 1alq in template set T0191 44 :LPENLKYVI 1alq 32 :ELNDLEKKY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1033 # 1eps.44.45 read from T0191.t2k.frag # found chain 1eps in template set Number of specific fragments= 0 total=1033 # 5ukdA.44.47 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 44 :LPENLKYVI 5ukdA 48 :GSKDGEMIA Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.63 Ang L2.CD2 and K7.NZ other bump:1.91765 Ang P3.CG and L6.CD2 other bump:1.9081 Ang P3.CD and L6.CD2 other bump:2.57963 Ang L2.N and L6.CD1 other bump:1.50402 Ang L2.CA and L6.CD1 other bump:2.50766 Ang L2.CB and L6.CD1 other bump:2.87686 Ang L2.CD1 and L6.CD1 other bump:1.66049 Ang L2.C and L6.CD1 other bump:1.6046 Ang P3.CD and L6.CD1 other bump:2.95261 Ang P3.CA and L6.CD1 other bump:1.63588 Ang P3.N and L6.CD1 other bump:3.0046 Ang L2.CA and L6.CG other bump:2.8963 Ang L2.C and L6.CG other bump:1.83602 Ang P3.CG and L6.CG other bump:1.65887 Ang P3.CD and L6.CG other bump:3.01274 Ang P3.CA and L6.CG other bump:2.98123 Ang P3.CB and L6.CG other bump:3.22244 Ang P3.C and L6.CG other bump:2.23357 Ang P3.N and L6.CG other bump:2.20062 Ang L2.CD1 and L6.CB other bump:3.1796 Ang P3.CD and L6.CB other bump:2.4202 Ang G1.O and P3.CD Number of specific fragments= 1 total=1034 # 1qf9A.44.47 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 44 :LPENLKYVI 1qf9A 48 :GSKDGEMIA Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.72718 Ang P3.CG and L6.CD2 other bump:1.88517 Ang P3.CD and L6.CD2 other bump:2.59577 Ang L2.O and L6.CD1 other bump:1.59195 Ang P3.N and L6.CD1 other bump:2.96669 Ang L2.N and L6.CD1 other bump:1.91984 Ang L2.CA and L6.CD1 other bump:1.60934 Ang L2.C and L6.CD1 other bump:2.96167 Ang P3.CA and L6.CD1 other bump:1.77226 Ang P3.CD and L6.CD1 other bump:2.11412 Ang P3.N and L6.CG other bump:2.85691 Ang L2.C and L6.CG other bump:2.8434 Ang P3.CG and L6.CG other bump:3.01483 Ang P3.CA and L6.CG other bump:1.69831 Ang P3.CD and L6.CG Number of specific fragments= 1 total=1035 # 1dbqA.44.47 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 44 :LPENLKYVI 1dbqA 100 :NLEKQRAYL Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59237 Ang P3.O and K7.CB other bump:2.47542 Ang L2.CD2 and N5.ND2 other bump:2.58087 Ang L2.CD2 and N5.CG Number of specific fragments= 1 total=1036 # 1g6sA.44.45 read from T0191.t2k.frag # found chain 1g6sA in training set T0191 44 :LPENLKYVI 1g6sA 46 :DSDDVRHML Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.22335 Ang G1.O and L6.CD1 other bump:2.52781 Ang G1.C and P3.CD neighbor-bump: 2.42592 Ang L2.N and P3.CD neighbor-bump: 2.33193 Ang L2.CA and P3.CD neighbor-bump: 1.78614 Ang L2.C and P3.CD Number of specific fragments= 1 total=1037 # 1alq.45.48 read from T0191.t2k.frag # found chain 1alq in template set T0191 45 :PENLKYVID 1alq 33 :LNDLEKKYN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1038 # 5ukdA.45.48 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 45 :PENLKYVID 5ukdA 49 :SKDGEMIAT Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.91765 Ang P2.CG and L5.CD2 other bump:1.90811 Ang P2.CD and L5.CD2 other bump:1.66049 Ang G1.C and L5.CD1 other bump:1.63587 Ang P2.N and L5.CD1 other bump:2.9526 Ang P2.CA and L5.CD1 other bump:1.60459 Ang P2.CD and L5.CD1 other bump:1.83601 Ang P2.CG and L5.CG other bump:2.89629 Ang G1.C and L5.CG other bump:2.23356 Ang P2.N and L5.CG other bump:3.01273 Ang P2.CA and L5.CG other bump:2.98122 Ang P2.CB and L5.CG other bump:1.65887 Ang P2.CD and L5.CG other bump:3.22243 Ang P2.C and L5.CG other bump:3.17961 Ang P2.CD and L5.CB Number of specific fragments= 1 total=1039 # 1qf9A.45.48 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 45 :PENLKYVID 1qf9A 49 :SKDGEMIAT Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.88516 Ang P2.CD and L5.CD2 other bump:2.72718 Ang P2.CG and L5.CD2 other bump:2.59577 Ang G1.O and L5.CD1 other bump:1.60934 Ang G1.C and L5.CD1 other bump:1.59195 Ang P2.N and L5.CD1 other bump:2.96167 Ang P2.CA and L5.CD1 other bump:1.77226 Ang P2.CD and L5.CD1 other bump:2.85691 Ang G1.C and L5.CG other bump:2.11412 Ang P2.N and L5.CG other bump:3.01483 Ang P2.CA and L5.CG other bump:1.69831 Ang P2.CD and L5.CG other bump:2.8434 Ang P2.CG and L5.CG Number of specific fragments= 1 total=1040 # 1eps.45.46 read from T0191.t2k.frag # found chain 1eps in template set Number of specific fragments= 0 total=1040 # 1dbqA.45.48 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 45 :PENLKYVID 1dbqA 101 :LEKQRAYLS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59237 Ang P2.O and K6.CB Number of specific fragments= 1 total=1041 # 5ukdA.45.47 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 45 :PENLKYVID 5ukdA 48 :GSKDGEMIA Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.17989 Ang P2.CG and K6.NZ other bump:2.82388 Ang P2.CD and K6.NZ other bump:2.77858 Ang P2.CB and K6.CE other bump:2.72041 Ang P2.CG and K6.CE other bump:2.63773 Ang G1.C and K6.CE other bump:2.61367 Ang P2.N and K6.CE other bump:2.59015 Ang P2.CA and K6.CE other bump:2.03232 Ang P2.CB and K6.CD other bump:2.66845 Ang P2.CG and K6.CD other bump:2.28637 Ang P2.CA and K6.CD Number of specific fragments= 1 total=1042 # 5ukdA.46.49 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 46 :ENLKYVIDG 5ukdA 50 :KDGEMIATM Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.22243 Ang G1.C and L4.CG Number of specific fragments= 1 total=1043 # 1qf9A.46.49 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 46 :ENLKYVIDG 1qf9A 50 :KDGEMIATM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1044 # 5ukdA.46.48 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 46 :ENLKYVIDG 5ukdA 49 :SKDGEMIAT Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1045 # 1qf9A.46.48 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 46 :ENLKYVIDG 1qf9A 49 :SKDGEMIAT Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.15216 Ang N3.ND2 and L4.N self-bump: 1.30754 Ang N3.CA and N3.CB Number of specific fragments= 1 total=1046 # 1alq.46.49 read from T0191.t2k.frag # found chain 1alq in template set T0191 46 :ENLKYVIDG 1alq 34 :NDLEKKYNA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1047 # 1dbqA.46.49 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 46 :ENLKYVIDG 1dbqA 102 :EKQRAYLSM Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59237 Ang G1.O and K5.CB Number of specific fragments= 1 total=1048 # 5ukdA.47.50 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 47 :NLKYVIDGA 5ukdA 51 :DGEMIATMI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1049 # 1qf9A.47.50 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 47 :NLKYVIDGA 1qf9A 51 :DGEMIATMI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1050 # 5ukdA.47.49 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 47 :NLKYVIDGA 5ukdA 50 :KDGEMIATM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1051 # 1qf9A.47.49 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 47 :NLKYVIDGA 1qf9A 50 :KDGEMIATM Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.68346 Ang N2.OD1 and L3.CD2 Number of specific fragments= 1 total=1052 # 1alq.47.50 read from T0191.t2k.frag # found chain 1alq in template set T0191 47 :NLKYVIDGA 1alq 35 :DLEKKYNAH Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1053 # 1dbqA.47.50 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 47 :NLKYVIDGA 1dbqA 103 :KQRAYLSMM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1054 # 5ukdA.48.51 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 48 :LKYVIDGAK 5ukdA 52 :GEMIATMIK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1055 # 1qf9A.48.51 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 48 :LKYVIDGAK 1qf9A 52 :GEMIATMIK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1056 # 5ukdA.48.50 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 48 :LKYVIDGAK 5ukdA 51 :DGEMIATMI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1057 # 1qf9A.48.50 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 48 :LKYVIDGAK 1qf9A 51 :DGEMIATMI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1058 # 1dbqA.48.51 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 48 :LKYVIDGAK 1dbqA 104 :QRAYLSMMA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1059 # 1d5tA.48.50 read from T0191.t2k.frag # found chain 1d5tA in training set T0191 48 :LKYVIDGAK 1d5tA 49 :LEELYKRFQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1060 # 5ukdA.49.51 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 49 :KYVIDGAKA 5ukdA 52 :GEMIATMIK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1061 # 5ukdA.49.52 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 49 :KYVIDGAKA 5ukdA 53 :EMIATMIKN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1062 # 1qf9A.49.52 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 49 :KYVIDGAKA 1qf9A 53 :EMIATMIKN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.50265 Ang K2.CD and I5.CD1 Number of specific fragments= 1 total=1063 # 1qf9A.49.51 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 49 :KYVIDGAKA 1qf9A 52 :GEMIATMIK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1064 # 1d5tA.49.51 read from T0191.t2k.frag # found chain 1d5tA in training set T0191 49 :KYVIDGAKA 1d5tA 50 :EELYKRFQL Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.18558 Ang I5.CG2 and A10.C other bump:2.17358 Ang I5.CG2 and A10.O Number of specific fragments= 1 total=1065 # 1dbqA.49.52 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 49 :KYVIDGAKA 1dbqA 105 :RAYLSMMAQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1066 # 5ukdA.50.53 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 50 :YVIDGAKAL 5ukdA 54 :MIATMIKNG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1067 # 1qf9A.50.53 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 50 :YVIDGAKAL 1qf9A 54 :MIATMIKNG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1068 # 5ukdA.50.52 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 50 :YVIDGAKAL 5ukdA 53 :EMIATMIKN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1069 # 1qf9A.50.52 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 50 :YVIDGAKAL 1qf9A 53 :EMIATMIKN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1070 # 1dbqA.50.53 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 50 :YVIDGAKAL 1dbqA 106 :AYLSMMAQK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1071 # 1hslA.50.53 read from T0191.t2k.frag # found chain 1hslA in template set T0191 50 :YVIDGAKAL 1hslA 54 :ALIPSLKAK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1072 # 5ukdA.51.54 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 51 :VIDGAKALG 5ukdA 55 :IATMIKNGE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1073 # 1qf9A.51.54 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 51 :VIDGAKALG 1qf9A 55 :IATMIKNGE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1074 # 5ukdA.51.53 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 51 :VIDGAKALG 5ukdA 54 :MIATMIKNG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1075 # 1qf9A.51.53 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 51 :VIDGAKALG 1qf9A 54 :MIATMIKNG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1076 # 1hslA.51.54 read from T0191.t2k.frag # found chain 1hslA in template set T0191 51 :VIDGAKALG 1hslA 55 :LIPSLKAKK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1077 # 1dbqA.51.54 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 51 :VIDGAKALG 1dbqA 107 :YLSMMAQKR Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1078 # 5ukdA.52.54 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 52 :IDGAKALGI 5ukdA 55 :IATMIKNGE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1079 # 1qf9A.52.54 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 52 :IDGAKALGI 1qf9A 55 :IATMIKNGE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1080 # 5ukdA.52.55 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 52 :IDGAKALGI 5ukdA 56 :ATMIKNGEI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1081 # 1qf9A.52.55 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 52 :IDGAKALGI 1qf9A 56 :ATMIKNGEI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1082 # 2scuA.52.56 read from T0191.t2k.frag # found chain 2scuA in template set T0191 52 :IDGAKALGI 2scuA 57 :REAVAATGA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1083 # 1dbqA.52.55 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 52 :IDGAKALGI 1dbqA 108 :LSMMAQKRV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1084 # 2scuA.53.57 read from T0191.t2k.frag # found chain 2scuA in template set T0191 53 :DGAKALGIV 2scuA 58 :EAVAATGAT Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1085 # 1scuA.53.57 read from T0191.t2k.frag # found chain 1scuA in template set T0191 53 :DGAKALGIV 1scuA 58 :EAVAATGAT Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I9.O and V10.CA Number of specific fragments= 1 total=1086 # 5ukdA.53.55 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 53 :DGAKALGIV 5ukdA 56 :ATMIKNGEI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1087 # 1qf9A.53.55 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 53 :DGAKALGIV 1qf9A 56 :ATMIKNGEI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1088 # 1dbqA.53.56 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 53 :DGAKALGIV 1dbqA 109 :SMMAQKRVD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1089 # 5ukdA.53.56 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 53 :DGAKALGIV 5ukdA 57 :TMIKNGEIV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1090 # 2scuA.54.58 read from T0191.t2k.frag # found chain 2scuA in template set T0191 54 :GAKALGIVG 2scuA 59 :AVAATGATA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.46491 Ang I8.CG2 and G10.O Number of specific fragments= 1 total=1091 # 1scuA.54.58 read from T0191.t2k.frag # found chain 1scuA in template set T0191 54 :GAKALGIVG 1scuA 59 :AVAATGATA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I8.O and V9.CA Number of specific fragments= 1 total=1092 # 1dbqA.54.57 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 54 :GAKALGIVG 1dbqA 110 :MMAQKRVDG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.49122 Ang I8.CG2 and G10.O Number of specific fragments= 1 total=1093 # 1pbgA.54.61 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 54 :GAKALGIVG 1pbgA 62 :LAEEYGVNG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.83197 Ang A3.CB and I8.CD1 other bump:3.00761 Ang A3.CB and I8.CG1 Number of specific fragments= 1 total=1094 # 5ukdA.54.56 read from T0191.t2k.frag # found chain 5ukdA in template set T0191 54 :GAKALGIVG 5ukdA 57 :TMIKNGEIV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1095 # 1qf9A.54.56 read from T0191.t2k.frag # found chain 1qf9A in template set T0191 54 :GAKALGIVG 1qf9A 57 :TMIKNGEIV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1096 # 1pbgA.55.62 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 55 :AKALGIVGF 1pbgA 63 :AEEYGVNGI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.83197 Ang A2.CB and I7.CD1 other bump:3.00761 Ang A2.CB and I7.CG1 Number of specific fragments= 1 total=1097 # 1dbqA.55.58 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 55 :AKALGIVGF 1dbqA 111 :MAQKRVDGL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.49122 Ang I7.CG2 and G9.O Number of specific fragments= 1 total=1098 # 2scuA.55.59 read from T0191.t2k.frag # found chain 2scuA in template set T0191 55 :AKALGIVGF 2scuA 60 :VAATGATAS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.46491 Ang I7.CG2 and G9.O Number of specific fragments= 1 total=1099 # 1scuA.55.59 read from T0191.t2k.frag # found chain 1scuA in template set T0191 55 :AKALGIVGF 1scuA 60 :VAATGATAS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I7.O and V8.CA Number of specific fragments= 1 total=1100 # 3pbgA.55.62 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 55 :AKALGIVGF 3pbgA 63 :AEEYGVNGI Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.9615 Ang A2.CA and I7.CD1 other bump:2.27078 Ang A2.CB and I7.CD1 other bump:2.91871 Ang A2.CA and I7.CG1 other bump:2.63784 Ang A2.CB and I7.CG1 other bump:2.9993 Ang A2.C and I7.CG1 Number of specific fragments= 1 total=1101 # 1tca.55.55 read from T0191.t2k.frag # found chain 1tca in training set T0191 55 :AKALGIVGF 1tca 56 :STQLGYTPC Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1102 # 1pbgA.56.63 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 56 :KALGIVGFN 1pbgA 64 :EEYGVNGIR Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1103 # 3pbgA.56.63 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 56 :KALGIVGFN 3pbgA 64 :EEYGVNGIR Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.9993 Ang G1.C and I6.CG1 Number of specific fragments= 1 total=1104 # 1dbqA.56.59 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 56 :KALGIVGFN 1dbqA 112 :AQKRVDGLL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.49122 Ang I6.CG2 and G8.O Number of specific fragments= 1 total=1105 # 2scuA.56.60 read from T0191.t2k.frag # found chain 2scuA in template set T0191 56 :KALGIVGFN 2scuA 61 :AATGATASV Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.46491 Ang I6.CG2 and G8.O Number of specific fragments= 1 total=1106 # 1scuA.56.60 read from T0191.t2k.frag # found chain 1scuA in template set T0191 56 :KALGIVGFN 1scuA 61 :AATGATASV Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I6.O and V7.CA Number of specific fragments= 1 total=1107 # 1tca.56.56 read from T0191.t2k.frag # found chain 1tca in training set T0191 56 :KALGIVGFN 1tca 57 :TQLGYTPCW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1108 # 1pbgA.57.64 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 57 :ALGIVGFNV 1pbgA 65 :EYGVNGIRI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56449 Ang F8.CD2 and V10.CG1 other bump:2.35154 Ang F8.CE2 and V10.CG1 Number of specific fragments= 1 total=1109 # 3pbgA.57.64 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 57 :ALGIVGFNV 3pbgA 65 :EYGVNGIRI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03133 Ang F8.CZ and V10.CG1 other bump:2.32688 Ang F8.CD2 and V10.CG1 other bump:1.79606 Ang F8.CE2 and V10.CG1 Number of specific fragments= 1 total=1110 # 1dbqA.57.60 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 57 :ALGIVGFNV 1dbqA 113 :QKRVDGLLV Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.49789 Ang F8.CZ and V10.CG2 other bump:2.45003 Ang F8.CD2 and V10.CG2 other bump:1.50546 Ang F8.CE2 and V10.CG2 other bump:2.9899 Ang F8.CE2 and V10.CB other bump:2.49122 Ang I5.CG2 and G7.O Number of specific fragments= 1 total=1111 # 1tca.57.57 read from T0191.t2k.frag # found chain 1tca in training set T0191 57 :ALGIVGFNV 1tca 58 :QLGYTPCWI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1112 # 2scuA.57.61 read from T0191.t2k.frag # found chain 2scuA in template set T0191 57 :ALGIVGFNV 2scuA 62 :ATGATASVI Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.71244 Ang F8.CD2 and V10.CG1 other bump:1.92385 Ang F8.CE2 and V10.CG1 other bump:2.99787 Ang F8.CZ and V10.CG1 other bump:2.46491 Ang I5.CG2 and G7.O Number of specific fragments= 1 total=1113 # 1scuA.57.61 read from T0191.t2k.frag # found chain 1scuA in template set T0191 57 :ALGIVGFNV 1scuA 62 :ATGATASVI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I5.O and V6.CA Number of specific fragments= 1 total=1114 # 1pbgA.58.65 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 58 :LGIVGFNVT 1pbgA 66 :YGVNGIRIS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.35154 Ang F7.CE2 and V9.CG1 other bump:2.56449 Ang F7.CD2 and V9.CG1 Number of specific fragments= 1 total=1115 # 3pbgA.58.65 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 58 :LGIVGFNVT 3pbgA 66 :YGVNGIRIS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03133 Ang F7.CZ and V9.CG1 other bump:2.32688 Ang F7.CD2 and V9.CG1 other bump:1.79606 Ang F7.CE2 and V9.CG1 Number of specific fragments= 1 total=1116 # 1dbqA.58.61 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 58 :LGIVGFNVT 1dbqA 114 :KRVDGLLVM Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.45003 Ang F7.CD2 and V9.CG2 other bump:1.50546 Ang F7.CE2 and V9.CG2 other bump:2.49789 Ang F7.CZ and V9.CG2 other bump:2.9899 Ang F7.CE2 and V9.CB other bump:2.49122 Ang I4.CG2 and G6.O Number of specific fragments= 1 total=1117 # 1tca.58.58 read from T0191.t2k.frag # found chain 1tca in training set T0191 58 :LGIVGFNVT 1tca 59 :LGYTPCWIS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1118 # 2scuA.58.62 read from T0191.t2k.frag # found chain 2scuA in template set T0191 58 :LGIVGFNVT 2scuA 63 :TGATASVIY Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.92385 Ang F7.CE2 and V9.CG1 other bump:2.71244 Ang F7.CD2 and V9.CG1 other bump:2.99787 Ang F7.CZ and V9.CG1 other bump:2.46491 Ang I4.CG2 and G6.O Number of specific fragments= 1 total=1119 # 1scuA.58.62 read from T0191.t2k.frag # found chain 1scuA in template set T0191 58 :LGIVGFNVT 1scuA 63 :TGATASVIY Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I4.O and V5.CA Number of specific fragments= 1 total=1120 # 1pbgA.59.66 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 59 :GIVGFNVTI 1pbgA 67 :GVNGIRISI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56449 Ang F6.CD2 and V8.CG1 other bump:2.35154 Ang F6.CE2 and V8.CG1 Number of specific fragments= 1 total=1121 # 3pbgA.59.66 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 59 :GIVGFNVTI 3pbgA 67 :GVNGIRISI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03133 Ang F6.CZ and V8.CG1 other bump:2.32688 Ang F6.CD2 and V8.CG1 other bump:1.79606 Ang F6.CE2 and V8.CG1 Number of specific fragments= 1 total=1122 # 1dbqA.59.62 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 59 :GIVGFNVTI 1dbqA 115 :RVDGLLVMC Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.50546 Ang F6.CE2 and V8.CG2 other bump:2.49789 Ang F6.CZ and V8.CG2 other bump:2.45003 Ang F6.CD2 and V8.CG2 other bump:2.9899 Ang F6.CE2 and V8.CB other bump:2.49122 Ang I3.CG2 and G5.O Number of specific fragments= 1 total=1123 # 2scuA.59.63 read from T0191.t2k.frag # found chain 2scuA in template set T0191 59 :GIVGFNVTI 2scuA 64 :GATASVIYV Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.71244 Ang F6.CD2 and V8.CG1 other bump:1.92385 Ang F6.CE2 and V8.CG1 other bump:2.99787 Ang F6.CZ and V8.CG1 other bump:2.46491 Ang I3.CG2 and G5.O Number of specific fragments= 1 total=1124 # 1scuA.59.63 read from T0191.t2k.frag # found chain 1scuA in template set T0191 59 :GIVGFNVTI 1scuA 64 :GATASVIYV Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I3.O and V4.CA Number of specific fragments= 1 total=1125 # 1tca.59.59 read from T0191.t2k.frag # found chain 1tca in training set T0191 59 :GIVGFNVTI 1tca 60 :GYTPCWISP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1126 # 1pbgA.60.67 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 60 :IVGFNVTIP 1pbgA 68 :VNGIRISIA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.35154 Ang F5.CE2 and V7.CG1 other bump:2.56449 Ang F5.CD2 and V7.CG1 Number of specific fragments= 1 total=1127 # 3pbgA.60.67 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 60 :IVGFNVTIP 3pbgA 68 :VNGIRISIA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03133 Ang F5.CZ and V7.CG1 other bump:1.79606 Ang F5.CE2 and V7.CG1 other bump:2.32688 Ang F5.CD2 and V7.CG1 Number of specific fragments= 1 total=1128 # 1scuA.60.64 read from T0191.t2k.frag # found chain 1scuA in template set T0191 60 :IVGFNVTIP 1scuA 65 :ATASVIYVP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.33908 Ang I2.O and V3.CA Number of specific fragments= 1 total=1129 # 2scuA.60.64 read from T0191.t2k.frag # found chain 2scuA in template set T0191 60 :IVGFNVTIP 2scuA 65 :ATASVIYVP Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.99787 Ang F5.CZ and V7.CG1 other bump:2.71244 Ang F5.CD2 and V7.CG1 other bump:1.92385 Ang F5.CE2 and V7.CG1 other bump:2.46492 Ang I2.CG2 and G4.O Number of specific fragments= 1 total=1130 # 1dbqA.60.63 read from T0191.t2k.frag # found chain 1dbqA in template set T0191 60 :IVGFNVTIP 1dbqA 116 :VDGLLVMCS Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 1.82013 Ang I9.O and P10.CD neighbor-bump: 1.24222 Ang I9.C and P10.CD neighbor-bump: 2.17322 Ang I9.CA and P10.CD neighbor-bump: 1.86948 Ang I9.O and P10.CG neighbor-bump: 2.19599 Ang I9.C and P10.CG other bump:1.50546 Ang F5.CE2 and V7.CG2 other bump:2.49789 Ang F5.CZ and V7.CG2 other bump:2.45003 Ang F5.CD2 and V7.CG2 other bump:2.9899 Ang F5.CE2 and V7.CB other bump:2.49121 Ang I2.CG2 and G4.O Number of specific fragments= 1 total=1131 # 1tca.60.60 read from T0191.t2k.frag # found chain 1tca in training set T0191 60 :IVGFNVTIP 1tca 61 :YTPCWISPP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.75049 Ang I2.CG2 and V3.N Number of specific fragments= 1 total=1132 # 1pbgA.61.68 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 61 :VGFNVTIPH 1pbgA 69 :NGIRISIAW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56449 Ang F4.CD2 and V6.CG1 other bump:2.35154 Ang F4.CE2 and V6.CG1 Number of specific fragments= 1 total=1133 # 3pbgA.61.68 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 61 :VGFNVTIPH 3pbgA 69 :NGIRISIAW Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03133 Ang F4.CZ and V6.CG1 other bump:1.79606 Ang F4.CE2 and V6.CG1 other bump:2.32688 Ang F4.CD2 and V6.CG1 Number of specific fragments= 1 total=1134 # 1scuA.61.65 read from T0191.t2k.frag # found chain 1scuA in template set T0191 61 :VGFNVTIPH 1scuA 66 :TASVIYVPA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.3988 Ang H10.CA and H10.CB neighbor-bump: 2.33908 Ang G1.O and V2.CA Number of specific fragments= 1 total=1135 # 2scuA.61.65 read from T0191.t2k.frag # found chain 2scuA in template set T0191 61 :VGFNVTIPH 2scuA 66 :TASVIYVPA Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.3986 Ang H10.CA and H10.CB other bump:1.92385 Ang F4.CE2 and V6.CG1 other bump:2.99787 Ang F4.CZ and V6.CG1 other bump:2.71244 Ang F4.CD2 and V6.CG1 Number of specific fragments= 1 total=1136 # 1gg4A.61.62 read from T0191.t2k.frag # found chain 1gg4A in template set T0191 61 :VGFNVTIPH 1gg4A 63 :GALLVSRPL Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56657 Ang I8.CG2 and H10.NE2 other bump:2.70943 Ang V6.CG2 and H10.CE1 other bump:2.93608 Ang I8.CG2 and H10.CE1 other bump:3.05857 Ang V6.CG2 and H10.ND1 neighbor-bump: 3.01947 Ang I8.CG1 and P9.CD Number of specific fragments= 1 total=1137 # 1tca.61.61 read from T0191.t2k.frag # found chain 1tca in training set T0191 61 :VGFNVTIPH 1tca 62 :TPCWISPPP Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.71665 Ang P9.CB and H10.NE2 neighbor-bump: 2.91042 Ang P9.CA and H10.CD2 neighbor-bump: 2.08941 Ang P9.CB and H10.CD2 neighbor-bump: 3.06242 Ang P9.CA and H10.CG neighbor-bump: 2.90475 Ang P9.CB and H10.CG self-bump: 1.29535 Ang H10.CA and H10.CB Number of specific fragments= 1 total=1138 # 1scuA.62.66 read from T0191.t2k.frag # found chain 1scuA in template set T0191 62 :GFNVTIPHK 1scuA 67 :ASVIYVPAP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 2.20654 Ang H9.CB and H9.C self-bump: 1.38139 Ang H9.CA and H9.CB Number of specific fragments= 1 total=1139 # 1pbgA.62.69 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 62 :GFNVTIPHK 1pbgA 70 :GIRISIAWS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56449 Ang F3.CD2 and V5.CG1 other bump:2.35154 Ang F3.CE2 and V5.CG1 Number of specific fragments= 1 total=1140 # 2scuA.62.66 read from T0191.t2k.frag # found chain 2scuA in template set T0191 62 :GFNVTIPHK 2scuA 67 :ASVIYVPAP Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.37032 Ang H9.CA and H9.CB other bump:2.99787 Ang F3.CZ and V5.CG1 other bump:2.71244 Ang F3.CD2 and V5.CG1 other bump:1.92385 Ang F3.CE2 and V5.CG1 Number of specific fragments= 1 total=1141 # 3pbgA.62.69 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 62 :GFNVTIPHK 3pbgA 70 :GIRISIAWS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03133 Ang F3.CZ and V5.CG1 other bump:2.32688 Ang F3.CD2 and V5.CG1 other bump:1.79606 Ang F3.CE2 and V5.CG1 Number of specific fragments= 1 total=1142 # 3seb.62.62 read from T0191.t2k.frag # found chain 3seb in training set T0191 62 :GFNVTIPHK 3seb 63 :NVRVEFKNK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56447 Ang H9.ND1 and G11.N Number of specific fragments= 1 total=1143 # 1tca.62.62 read from T0191.t2k.frag # found chain 1tca in training set T0191 62 :GFNVTIPHK 1tca 63 :PCWISPPPF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1144 # 1scuA.63.67 read from T0191.t2k.frag # found chain 1scuA in template set T0191 63 :FNVTIPHKI 1scuA 68 :SVIYVPAPF Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 2.20654 Ang H8.CB and H8.C self-bump: 1.38139 Ang H8.CA and H8.CB Number of specific fragments= 1 total=1145 # 2scuA.63.67 read from T0191.t2k.frag # found chain 2scuA in template set T0191 63 :FNVTIPHKI 2scuA 68 :SVIYVPAPF Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92831 Ang I6.CD1 and I10.CG2 self-bump: 1.37032 Ang H8.CA and H8.CB other bump:1.92386 Ang F2.CE2 and V4.CG1 other bump:2.99789 Ang F2.CZ and V4.CG1 other bump:2.71244 Ang F2.CD2 and V4.CG1 Number of specific fragments= 1 total=1146 # 3seb.63.63 read from T0191.t2k.frag # found chain 3seb in training set T0191 63 :FNVTIPHKI 3seb 64 :VRVEFKNKD Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03358 Ang H8.ND1 and I10.CG1 other bump:2.89595 Ang H8.CE1 and I10.CG1 other bump:2.56447 Ang H8.ND1 and I10.N Number of specific fragments= 1 total=1147 # 1pbgA.63.70 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 63 :FNVTIPHKI 1pbgA 71 :IRISIAWSR Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.86327 Ang P7.CG and I10.CD1 other bump:3.06988 Ang P7.CD and I10.CD1 other bump:3.00353 Ang P7.CB and I10.CD1 other bump:2.88081 Ang P7.CG and I10.CG1 other bump:2.35154 Ang F2.CE2 and V4.CG1 other bump:2.5645 Ang F2.CD2 and V4.CG1 Number of specific fragments= 1 total=1148 # 3pbgA.63.70 read from T0191.t2k.frag # found chain 3pbgA in template set T0191 63 :FNVTIPHKI 3pbgA 71 :IRISIAWSR Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.04294 Ang P7.CG and I10.CD1 other bump:1.79606 Ang F2.CE2 and V4.CG1 other bump:3.03133 Ang F2.CZ and V4.CG1 other bump:2.32688 Ang F2.CD2 and V4.CG1 Number of specific fragments= 1 total=1149 # 1d5mC.63.63 read from T0191.t2k.frag # found chain 1d5mC in template set T0191 63 :FNVTIPHKI 1d5mC 64 :VRVEFKNKD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.22857 Ang H8.ND1 and I10.CD1 other bump:2.75794 Ang H8.ND1 and I10.CG1 other bump:2.65878 Ang H8.CE1 and I10.CG1 other bump:3.00365 Ang H8.ND1 and I10.CB other bump:2.471 Ang H8.ND1 and I10.N Number of specific fragments= 1 total=1150 # 3seb.64.64 read from T0191.t2k.frag # found chain 3seb in training set T0191 64 :NVTIPHKIE 3seb 65 :RVEFKNKDL Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.61164 Ang I5.CD1 and G11.CA other bump:2.47279 Ang I5.CD1 and G11.N other bump:2.83917 Ang I5.CG2 and E10.CB other bump:3.03359 Ang H7.ND1 and I9.CG1 other bump:2.89595 Ang H7.CE1 and I9.CG1 other bump:2.56447 Ang H7.ND1 and I9.N Number of specific fragments= 1 total=1151 # 1scuA.64.68 read from T0191.t2k.frag # found chain 1scuA in template set T0191 64 :NVTIPHKIE 1scuA 69 :VIYVPAPFC Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 2.20654 Ang H7.CB and H7.C self-bump: 1.38139 Ang H7.CA and H7.CB Number of specific fragments= 1 total=1152 # 2scuA.64.68 read from T0191.t2k.frag # found chain 2scuA in template set T0191 64 :NVTIPHKIE 2scuA 69 :VIYVPAPFC Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92832 Ang I5.CD1 and I9.CG2 self-bump: 1.37032 Ang H7.CA and H7.CB Number of specific fragments= 1 total=1153 # 1d5mC.64.64 read from T0191.t2k.frag # found chain 1d5mC in template set T0191 64 :NVTIPHKIE 1d5mC 65 :RVEFKNKDL Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.42498 Ang I5.CD1 and G11.CA other bump:2.36318 Ang I5.CD1 and G11.N other bump:2.71583 Ang I5.CG2 and E10.CB other bump:3.22857 Ang H7.ND1 and I9.CD1 other bump:2.75794 Ang H7.ND1 and I9.CG1 other bump:2.65878 Ang H7.CE1 and I9.CG1 other bump:3.00365 Ang H7.ND1 and I9.CB other bump:2.471 Ang H7.ND1 and I9.N Number of specific fragments= 1 total=1154 # 1pbgA.64.71 read from T0191.t2k.frag # found chain 1pbgA in template set T0191 64 :NVTIPHKIE 1pbgA 72 :RISIAWSRI Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.00354 Ang P6.CB and I9.CD1 other bump:1.86328 Ang P6.CG and I9.CD1 other bump:3.06989 Ang P6.CD and I9.CD1 other bump:2.88081 Ang P6.CG and I9.CG1 Number of specific fragments= 1 total=1155 # 1fo5A.64.67 read from T0191.t2k.frag # found chain 1fo5A in template set T0191 64 :NVTIPHKIE 1fo5A 67 :FIGAPTKEA Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.2327 Ang V3.CG2 and E10.OE1 neighbor-bump: 2.5228 Ang H7.CD2 and K8.N other bump:2.65817 Ang T4.OG1 and P6.C other bump:1.98314 Ang T4.OG1 and P6.O neighbor-bump: 1.93894 Ang V3.O and T4.CG2 neighbor-bump: 2.62887 Ang V3.C and T4.CG2 Number of specific fragments= 1 total=1156 # 3seb.65.65 read from T0191.t2k.frag # found chain 3seb in training set T0191 65 :VTIPHKIEI 3seb 66 :VEFKNKDLA Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.02074 Ang I4.CD1 and I10.CG1 other bump:3.04118 Ang I4.CG1 and I10.CG1 other bump:2.8308 Ang I4.CD1 and I10.CB other bump:2.61164 Ang I4.CD1 and I10.CA other bump:2.47279 Ang I4.CD1 and I10.N other bump:2.63911 Ang I4.CG2 and E9.OE1 other bump:2.78885 Ang I4.CG2 and E9.CB other bump:3.03359 Ang H6.ND1 and I8.CG1 other bump:2.89595 Ang H6.CE1 and I8.CG1 other bump:2.56447 Ang H6.ND1 and I8.N Number of specific fragments= 1 total=1157 # 1scuA.65.69 read from T0191.t2k.frag # found chain 1scuA in template set T0191 65 :VTIPHKIEI 1scuA 70 :IYVPAPFCK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 2.20654 Ang H6.CB and H6.C self-bump: 1.38139 Ang H6.CA and H6.CB Number of specific fragments= 1 total=1158 # 2scuA.65.69 read from T0191.t2k.frag # found chain 2scuA in template set T0191 65 :VTIPHKIEI 2scuA 70 :IYVPAPFCK Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92832 Ang I4.CD1 and I8.CG2 self-bump: 1.37032 Ang H6.CA and H6.CB Number of specific fragments= 1 total=1159 # 1d5mC.65.65 read from T0191.t2k.frag # found chain 1d5mC in template set T0191 65 :VTIPHKIEI 1d5mC 66 :VEFKNKDLA Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:1.90627 Ang I4.CD1 and I10.CG1 other bump:2.9354 Ang I4.CG1 and I10.CG1 other bump:2.65616 Ang I4.CD1 and I10.CB other bump:2.42498 Ang I4.CD1 and I10.CA other bump:2.36318 Ang I4.CD1 and I10.N other bump:2.71584 Ang I4.CG2 and E9.CB other bump:3.22857 Ang H6.ND1 and I8.CD1 other bump:2.75794 Ang H6.ND1 and I8.CG1 other bump:2.65878 Ang H6.CE1 and I8.CG1 other bump:3.00365 Ang H6.ND1 and I8.CB other bump:2.471 Ang H6.ND1 and I8.N Number of specific fragments= 1 total=1160 # 1fo5A.65.68 read from T0191.t2k.frag # found chain 1fo5A in template set T0191 65 :VTIPHKIEI 1fo5A 68 :IGAPTKEAL Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.02617 Ang K7.CD and I10.CD1 other bump:2.23269 Ang V2.CG2 and E9.OE1 neighbor-bump: 2.5228 Ang H6.CD2 and K7.N other bump:2.65817 Ang T3.OG1 and P5.C other bump:1.98314 Ang T3.OG1 and P5.O neighbor-bump: 1.93894 Ang V2.O and T3.CG2 neighbor-bump: 2.62887 Ang V2.C and T3.CG2 Number of specific fragments= 1 total=1161 # 1fw1A.65.66 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 65 :VTIPHKIEI 1fw1A 67 :ITIHQSLAI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1162 # 3seb.66.66 read from T0191.t2k.frag # found chain 3seb in training set T0191 66 :TIPHKIEIM 3seb 67 :EFKNKDLAD Fragment has 10 clashes (null) has 10 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.04118 Ang I3.CG1 and I9.CG1 other bump:2.02075 Ang I3.CD1 and I9.CG1 other bump:2.8308 Ang I3.CD1 and I9.CB other bump:2.61164 Ang I3.CD1 and I9.CA other bump:2.47279 Ang I3.CD1 and I9.N other bump:2.63911 Ang I3.CG2 and E8.OE1 other bump:2.78885 Ang I3.CG2 and E8.CB other bump:3.03359 Ang H5.ND1 and I7.CG1 other bump:2.89595 Ang H5.CE1 and I7.CG1 other bump:2.56447 Ang H5.ND1 and I7.N Number of specific fragments= 1 total=1163 # 1scuA.66.70 read from T0191.t2k.frag # found chain 1scuA in template set T0191 66 :TIPHKIEIM 1scuA 71 :YVPAPFCKD Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 2.20654 Ang H5.CB and H5.C self-bump: 1.38139 Ang H5.CA and H5.CB Number of specific fragments= 1 total=1164 # 1fo5A.66.69 read from T0191.t2k.frag # found chain 1fo5A in template set T0191 66 :TIPHKIEIM 1fo5A 69 :GAPTKEALV Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.16793 Ang H5.CD2 and M10.SD other bump:3.02617 Ang K6.CD and I9.CD1 neighbor-bump: 2.5228 Ang H5.CD2 and K6.N neighbor-bump: 3.04711 Ang T2.CG2 and I3.CA neighbor-bump: 2.40693 Ang T2.CB and I3.N neighbor-bump: 1.81652 Ang T2.CG2 and I3.N self-bump: 2.1998 Ang T2.CB and T2.C self-bump: 2.3976 Ang T2.CG2 and T2.C self-bump: 1.27404 Ang T2.CA and T2.CB Number of specific fragments= 1 total=1165 # 1fw1A.66.67 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 66 :TIPHKIEIM 1fw1A 68 :TIHQSLAII Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1166 # 1d5mC.66.66 read from T0191.t2k.frag # found chain 1d5mC in template set T0191 66 :TIPHKIEIM 1d5mC 67 :EFKNKDLAD Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56945 Ang K6.NZ and M10.SD other bump:2.9354 Ang I3.CG1 and I9.CG1 other bump:1.90627 Ang I3.CD1 and I9.CG1 other bump:2.65616 Ang I3.CD1 and I9.CB other bump:2.42498 Ang I3.CD1 and I9.CA other bump:2.36318 Ang I3.CD1 and I9.N other bump:2.71584 Ang I3.CG2 and E8.CB other bump:3.22857 Ang H5.ND1 and I7.CD1 other bump:2.65878 Ang H5.CE1 and I7.CG1 other bump:2.75794 Ang H5.ND1 and I7.CG1 other bump:3.00365 Ang H5.ND1 and I7.CB other bump:2.471 Ang H5.ND1 and I7.N Number of specific fragments= 1 total=1167 # 2scuA.66.70 read from T0191.t2k.frag # found chain 2scuA in template set T0191 66 :TIPHKIEIM 2scuA 71 :YVPAPFCKD Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.80197 Ang I3.CD1 and I7.CG2 self-bump: 1.37032 Ang H5.CA and H5.CB Number of specific fragments= 1 total=1168 # 3seb.67.67 read from T0191.t2k.frag # found chain 3seb in training set T0191 67 :IPHKIEIMK 3seb 68 :FKNKDLADK Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.45218 Ang K5.NZ and M9.SD other bump:3.04118 Ang I2.CG1 and I8.CG1 other bump:2.02075 Ang I2.CD1 and I8.CG1 other bump:2.8308 Ang I2.CD1 and I8.CB other bump:2.61164 Ang I2.CD1 and I8.CA other bump:2.47278 Ang I2.CD1 and I8.N other bump:2.63911 Ang I2.CG2 and E7.OE1 other bump:2.78885 Ang I2.CG2 and E7.CB other bump:3.03359 Ang H4.ND1 and I6.CG1 other bump:2.89595 Ang H4.CE1 and I6.CG1 other bump:2.56447 Ang H4.ND1 and I6.N Number of specific fragments= 1 total=1169 # 1fw1A.67.68 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 67 :IPHKIEIMK 1fw1A 69 :IHQSLAIIE Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.67838 Ang I6.CG2 and K10.NZ Number of specific fragments= 1 total=1170 # 1fo5A.67.70 read from T0191.t2k.frag # found chain 1fo5A in template set T0191 67 :IPHKIEIMK 1fo5A 70 :APTKEALVE Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.16793 Ang H4.CD2 and M9.SD other bump:3.02617 Ang K5.CD and I8.CD1 neighbor-bump: 2.5228 Ang H4.CD2 and K5.N Number of specific fragments= 1 total=1171 # 1kpsB.67.67 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 67 :IPHKIEIMK 1kpsB 486 :ASVKTAVLD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1172 # 1d5mC.67.67 read from T0191.t2k.frag # found chain 1d5mC in template set T0191 67 :IPHKIEIMK 1d5mC 68 :FKNKDLADK Fragment has 12 clashes (null) has 12 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56945 Ang K5.NZ and M9.SD other bump:2.9354 Ang I2.CG1 and I8.CG1 other bump:1.90627 Ang I2.CD1 and I8.CG1 other bump:2.65616 Ang I2.CD1 and I8.CB other bump:2.42498 Ang I2.CD1 and I8.CA other bump:2.36318 Ang I2.CD1 and I8.N other bump:2.71584 Ang I2.CG2 and E7.CB other bump:3.22857 Ang H4.ND1 and I6.CD1 other bump:2.75794 Ang H4.ND1 and I6.CG1 other bump:2.65878 Ang H4.CE1 and I6.CG1 other bump:3.00365 Ang H4.ND1 and I6.CB other bump:2.471 Ang H4.ND1 and I6.N Number of specific fragments= 1 total=1173 # 1scuA.67.71 read from T0191.t2k.frag # found chain 1scuA in template set T0191 67 :IPHKIEIMK 1scuA 72 :VPAPFCKDS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.52523 Ang I2.CD1 and K10.CB self-bump: 2.20654 Ang H4.CB and H4.C self-bump: 1.38139 Ang H4.CA and H4.CB Number of specific fragments= 1 total=1174 # 1fw1A.68.69 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 68 :PHKIEIMKY 1fw1A 70 :HQSLAIIEY Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.67838 Ang I5.CG2 and K9.NZ Number of specific fragments= 1 total=1175 # 3seb.68.68 read from T0191.t2k.frag # found chain 3seb in training set T0191 68 :PHKIEIMKY 3seb 69 :KNKDLADKY Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.45218 Ang K4.NZ and M8.SD other bump:3.03359 Ang H3.ND1 and I5.CG1 other bump:2.89595 Ang H3.CE1 and I5.CG1 other bump:2.56447 Ang H3.ND1 and I5.N Number of specific fragments= 1 total=1176 # 1kpsB.68.68 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 68 :PHKIEIMKY 1kpsB 487 :SVKTAVLDA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1177 # 1fo5A.68.71 read from T0191.t2k.frag # found chain 1fo5A in template set T0191 68 :PHKIEIMKY 1fo5A 71 :PTKEALVEA Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.99285 Ang I5.CG2 and K9.NZ other bump:3.16793 Ang H3.CD2 and M8.SD other bump:3.02617 Ang K4.CD and I7.CD1 neighbor-bump: 2.5228 Ang H3.CD2 and K4.N Number of specific fragments= 1 total=1178 # 1d5mC.68.68 read from T0191.t2k.frag # found chain 1d5mC in template set T0191 68 :PHKIEIMKY 1d5mC 69 :KNKDLADKY Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.56945 Ang K4.NZ and M8.SD other bump:3.22857 Ang H3.ND1 and I5.CD1 other bump:2.65878 Ang H3.CE1 and I5.CG1 other bump:2.75794 Ang H3.ND1 and I5.CG1 other bump:3.00365 Ang H3.ND1 and I5.CB other bump:2.471 Ang H3.ND1 and I5.N Number of specific fragments= 1 total=1179 # 1kamA.68.73 read from T0191.t2k.frag # found chain 1kamA in template set T0191 68 :PHKIEIMKY 1kamA 69 :SFKLELVEM Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.22915 Ang E6.OE2 and M8.SD other bump:2.18825 Ang E6.OE2 and M8.CG other bump:3.09212 Ang E6.CD and M8.CG Number of specific fragments= 1 total=1180 # 1kpsB.69.69 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 69 :HKIEIMKYL 1kpsB 488 :VKTAVLDAI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03685 Ang H2.CE1 and I6.CG2 other bump:2.70521 Ang H2.NE2 and I6.CG2 Number of specific fragments= 1 total=1181 # 1fw1A.69.70 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 69 :HKIEIMKYL 1fw1A 71 :QSLAIIEYL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.67838 Ang I4.CG2 and K8.NZ Number of specific fragments= 1 total=1182 # 3seb.69.69 read from T0191.t2k.frag # found chain 3seb in training set T0191 69 :HKIEIMKYL 3seb 70 :NKDLADKYK Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.45218 Ang K3.NZ and M7.SD other bump:3.15904 Ang H2.CE1 and I4.CG2 other bump:2.49635 Ang H2.CE1 and I4.CB other bump:2.95083 Ang H2.ND1 and I4.CB Number of specific fragments= 1 total=1183 # 1fo5A.69.72 read from T0191.t2k.frag # found chain 1fo5A in template set T0191 69 :HKIEIMKYL 1fo5A 72 :TKEALVEAI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.99285 Ang I4.CG2 and K8.NZ other bump:3.02617 Ang K3.CD and I6.CD1 Number of specific fragments= 1 total=1184 # 1pytA.69.72 read from T0191.t2k.frag # found chain 1pytA in template set T0191 69 :HKIEIMKYL 1pytA 78 :MIEDVQSLL Fragment has 14 clashes (null) has 14 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.19639 Ang K3.NZ and Y9.OH other bump:0.927267 Ang K3.NZ and Y9.CZ other bump:2.23597 Ang K3.CE and Y9.CZ other bump:1.26445 Ang K3.NZ and Y9.CE2 other bump:1.36895 Ang K3.NZ and Y9.CE1 other bump:2.11031 Ang K3.CE and Y9.CE1 other bump:1.82715 Ang K3.NZ and Y9.CD2 other bump:2.71394 Ang K3.CE and Y9.CD2 other bump:1.91757 Ang K3.NZ and Y9.CD1 other bump:2.33433 Ang K3.CE and Y9.CD1 other bump:2.12505 Ang K3.NZ and Y9.CG other bump:2.64751 Ang K3.CE and Y9.CG other bump:2.82774 Ang E5.CD and K8.NZ other bump:2.39831 Ang E5.OE1 and K8.CE Number of specific fragments= 1 total=1185 # 1kamA.69.74 read from T0191.t2k.frag # found chain 1kamA in template set T0191 69 :HKIEIMKYL 1kamA 70 :FKLELVEME Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.22915 Ang E5.OE2 and M7.SD other bump:3.09212 Ang E5.CD and M7.CG other bump:2.18825 Ang E5.OE2 and M7.CG Number of specific fragments= 1 total=1186 # 1kpsB.70.70 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 70 :KIEIMKYLD 1kpsB 489 :KTAVLDAID Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1187 # 1fw1A.70.71 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 70 :KIEIMKYLD 1fw1A 72 :SLAIIEYLE Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.67838 Ang I3.CG2 and K7.NZ Number of specific fragments= 1 total=1188 # 1pytA.70.73 read from T0191.t2k.frag # found chain 1pytA in template set T0191 70 :KIEIMKYLD 1pytA 79 :IEDVQSLLD Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.82775 Ang E4.CD and K7.NZ other bump:2.39833 Ang E4.OE1 and K7.CE Number of specific fragments= 1 total=1189 # 3seb.70.70 read from T0191.t2k.frag # found chain 3seb in training set T0191 70 :KIEIMKYLD 3seb 71 :KDLADKYKD Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.2822 Ang L9.CA and L9.CB other bump:2.45218 Ang K2.NZ and M6.SD Number of specific fragments= 1 total=1190 # 1ifa.70.74 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1190 # 1d1qA.70.77 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 70 :KIEIMKYLD 1d1qA 77 :KQIKTKHFD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11928 Ang I5.CB and Y8.CE1 other bump:2.91525 Ang I5.CG1 and Y8.CE1 other bump:2.59937 Ang I5.CD1 and Y8.CE1 other bump:3.03488 Ang I5.N and Y8.CD1 other bump:2.85744 Ang I5.CB and Y8.CD1 Number of specific fragments= 1 total=1191 # 1kpsB.71.71 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 71 :IEIMKYLDE 1kpsB 490 :TAVLDAIDA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1192 # 1fw1A.71.72 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 71 :IEIMKYLDE 1fw1A 73 :LAIIEYLEE Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.67838 Ang I2.CG2 and K6.NZ Number of specific fragments= 1 total=1193 # 1pytA.71.74 read from T0191.t2k.frag # found chain 1pytA in template set T0191 71 :IEIMKYLDE 1pytA 80 :EDVQSLLDE Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.82774 Ang E3.CD and K6.NZ other bump:2.39831 Ang E3.OE1 and K6.CE Number of specific fragments= 1 total=1194 # 1ifa.71.75 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1194 # 3seb.71.71 read from T0191.t2k.frag # found chain 3seb in training set T0191 71 :IEIMKYLDE 3seb 72 :DLADKYKDK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.2822 Ang L8.CA and L8.CB Number of specific fragments= 1 total=1195 # 1d1qA.71.78 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 71 :IEIMKYLDE 1d1qA 78 :QIKTKHFDE Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11929 Ang I4.CB and Y7.CE1 other bump:2.91526 Ang I4.CG1 and Y7.CE1 other bump:2.59938 Ang I4.CD1 and Y7.CE1 other bump:3.03488 Ang I4.N and Y7.CD1 other bump:2.85744 Ang I4.CB and Y7.CD1 Number of specific fragments= 1 total=1196 # 1kpsB.72.72 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 72 :EIMKYLDEI 1kpsB 491 :AVLDAIDAL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.93061 Ang Y6.CE2 and I10.CD1 Number of specific fragments= 1 total=1197 # 1fw1A.72.73 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 72 :EIMKYLDEI 1fw1A 74 :AIIEYLEET Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1198 # 1pytA.72.75 read from T0191.t2k.frag # found chain 1pytA in template set T0191 72 :EIMKYLDEI 1pytA 81 :DVQSLLDEE Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.57885 Ang E2.OE1 and K5.CE Number of specific fragments= 1 total=1199 # 1ifa.72.76 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1199 # 1d1qA.72.79 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 72 :EIMKYLDEI 1d1qA 79 :IKTKHFDEY Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11929 Ang I3.CB and Y6.CE1 other bump:2.91525 Ang I3.CG1 and Y6.CE1 other bump:2.59937 Ang I3.CD1 and Y6.CE1 other bump:3.03488 Ang I3.N and Y6.CD1 other bump:2.85744 Ang I3.CB and Y6.CD1 Number of specific fragments= 1 total=1200 # 3seb.72.72 read from T0191.t2k.frag # found chain 3seb in training set T0191 72 :EIMKYLDEI 3seb 73 :LADKYKDKY Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues self-bump: 1.2822 Ang L7.CA and L7.CB Number of specific fragments= 1 total=1201 # 1kpsB.73.73 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 73 :IMKYLDEID 1kpsB 492 :VLDAIDALM Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.9306 Ang Y5.CE2 and I9.CD1 Number of specific fragments= 1 total=1202 # 1fw1A.73.74 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 73 :IMKYLDEID 1fw1A 75 :IIEYLEETR Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 3.31273 Ang I9.CG1 and D10.OD1 other bump:3.03628 Ang Y5.CE2 and I9.CD1 Number of specific fragments= 1 total=1203 # 1pytA.73.76 read from T0191.t2k.frag # found chain 1pytA in template set T0191 73 :IMKYLDEID 1pytA 82 :VQSLLDEEQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1204 # 1ifa.73.77 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1204 # 1d1qA.73.80 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 73 :IMKYLDEID 1d1qA 80 :KTKHFDEYD Fragment has 5 clashes (null) has 5 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11929 Ang I2.CB and Y5.CE1 other bump:2.91525 Ang I2.CG1 and Y5.CE1 other bump:2.59938 Ang I2.CD1 and Y5.CE1 other bump:3.03488 Ang I2.N and Y5.CD1 other bump:2.85744 Ang I2.CB and Y5.CD1 Number of specific fragments= 1 total=1205 # 1hrkA.73.78 read from T0191.t2k.frag # found chain 1hrkA in template set T0191 73 :IMKYLDEID 1hrkA 143 :MVKLLDELS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.66566 Ang K4.NZ and Y5.CE1 neighbor-bump: 2.8861 Ang K4.NZ and Y5.CD1 Number of specific fragments= 1 total=1206 # 1kpsB.74.74 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 74 :MKYLDEIDK 1kpsB 493 :LDAIDALMK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.9306 Ang Y4.CE2 and I8.CD1 Number of specific fragments= 1 total=1207 # 1fw1A.74.75 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 74 :MKYLDEIDK 1fw1A 76 :IEYLEETRP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03628 Ang Y4.CE2 and I8.CD1 Number of specific fragments= 1 total=1208 # 1pytA.74.77 read from T0191.t2k.frag # found chain 1pytA in template set T0191 74 :MKYLDEIDK 1pytA 83 :QSLLDEEQE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1209 # 1ifa.74.78 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1209 # 1d1qA.74.81 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 74 :MKYLDEIDK 1d1qA 81 :TKHFDEYDY Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.1946 Ang I8.CG2 and K10.C other bump:2.42142 Ang I8.CG2 and K10.O Number of specific fragments= 1 total=1210 # 1hrkA.74.79 read from T0191.t2k.frag # found chain 1hrkA in template set T0191 74 :MKYLDEIDK 1hrkA 144 :VKLLDELSP Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.66566 Ang K3.NZ and Y4.CE1 neighbor-bump: 2.8861 Ang K3.NZ and Y4.CD1 Number of specific fragments= 1 total=1211 # 1kpsB.75.75 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 75 :KYLDEIDKD 1kpsB 494 :DAIDALMKK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.9306 Ang Y3.CE2 and I7.CD1 Number of specific fragments= 1 total=1212 # 1fw1A.75.76 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 75 :KYLDEIDKD 1fw1A 77 :EYLEETRPT Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03628 Ang Y3.CE2 and I7.CD1 Number of specific fragments= 1 total=1213 # 1pytA.75.78 read from T0191.t2k.frag # found chain 1pytA in template set T0191 75 :KYLDEIDKD 1pytA 84 :SLLDEEQEQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1214 # 1ifa.75.79 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1214 # 1d1qA.75.82 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 75 :KYLDEIDKD 1d1qA 82 :KHFDEYDYI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.1946 Ang I7.CG2 and K9.C other bump:2.42142 Ang I7.CG2 and K9.O Number of specific fragments= 1 total=1215 # 1hrkA.75.80 read from T0191.t2k.frag # found chain 1hrkA in template set T0191 75 :KYLDEIDKD 1hrkA 145 :KLLDELSPN Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.66566 Ang K2.NZ and Y3.CE1 neighbor-bump: 2.8861 Ang K2.NZ and Y3.CD1 Number of specific fragments= 1 total=1216 # 1kpsB.76.76 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 76 :YLDEIDKDA 1kpsB 495 :AIDALMKKA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.93059 Ang Y2.CE2 and I6.CD1 Number of specific fragments= 1 total=1217 # 1pytA.76.79 read from T0191.t2k.frag # found chain 1pytA in template set T0191 76 :YLDEIDKDA 1pytA 85 :LLDEEQEQM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1218 # 1fw1A.76.77 read from T0191.t2k.frag # found chain 1fw1A in template set T0191 76 :YLDEIDKDA 1fw1A 78 :YLEETRPTP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.03628 Ang Y2.CE2 and I6.CD1 Number of specific fragments= 1 total=1219 # 1d1qA.76.83 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 76 :YLDEIDKDA 1d1qA 83 :HFDEYDYII Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.1946 Ang I6.CG2 and K8.C other bump:2.42142 Ang I6.CG2 and K8.O Number of specific fragments= 1 total=1220 # 1ifa.76.80 read from T0191.t2k.frag # found chain 1ifa in template set Number of specific fragments= 0 total=1220 # 1e5kA.76.79 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 76 :YLDEIDKDA 1e5kA 80 :LAGMLSVMQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1221 # 1kpsB.77.77 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 77 :LDEIDKDAQ 1kpsB 496 :IDALMKKAF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1222 # 1pytA.77.80 read from T0191.t2k.frag # found chain 1pytA in template set T0191 77 :LDEIDKDAQ 1pytA 86 :LDEEQEQMF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1223 # 1i1kA.77.79 read from T0191.t2k.frag # found chain 1i1kA in template set T0191 77 :LDEIDKDAQ 1i1kA 79 :MEACRDVIR Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1224 # 1e5kA.77.80 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 77 :LDEIDKDAQ 1e5kA 81 :AGMLSVMQQ Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.35967 Ang D6.OD2 and Q10.NE2 other bump:2.58571 Ang D6.CG and Q10.NE2 Number of specific fragments= 1 total=1225 # 1d1qA.77.84 read from T0191.t2k.frag # found chain 1d1qA in template set T0191 77 :LDEIDKDAQ 1d1qA 84 :FDEYDYIIG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.1946 Ang I5.CG2 and K7.C other bump:2.42142 Ang I5.CG2 and K7.O Number of specific fragments= 1 total=1226 # 1di6A.77.79 read from T0191.t2k.frag # found chain 1di6A in template set T0191 77 :LDEIDKDAQ 1di6A 80 :RRDVTPDAT Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1227 # 1kpsB.78.78 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 78 :DEIDKDAQL 1kpsB 497 :DALMKKAFS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1228 # 1pytA.78.81 read from T0191.t2k.frag # found chain 1pytA in template set T0191 78 :DEIDKDAQL 1pytA 87 :DEEQEQMFA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1229 # 1e5kA.78.81 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 78 :DEIDKDAQL 1e5kA 82 :GMLSVMQQE Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.51786 Ang Q9.O and L10.CD1 other bump:2.58571 Ang D5.CG and Q9.NE2 other bump:2.35967 Ang D5.OD2 and Q9.NE2 Number of specific fragments= 1 total=1230 # 1di6A.78.80 read from T0191.t2k.frag # found chain 1di6A in template set T0191 78 :DEIDKDAQL 1di6A 81 :RDVTPDATL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1231 # 1i1kA.78.80 read from T0191.t2k.frag # found chain 1i1kA in template set T0191 78 :DEIDKDAQL 1i1kA 80 :EACRDVIRK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1232 # 1dpsD.78.77 read from T0191.t2k.frag # found chain 1dpsD in template set T0191 78 :DEIDKDAQL 1dpsD 78 :DTMAERAVQ Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1233 # 1kpsB.79.79 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 79 :EIDKDAQLI 1kpsB 498 :ALMKKAFSC Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1234 # 1pytA.79.82 read from T0191.t2k.frag # found chain 1pytA in template set T0191 79 :EIDKDAQLI 1pytA 88 :EEQEQMFAS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.42851 Ang D6.CG and I10.CD1 other bump:2.22673 Ang D6.OD2 and I10.CD1 other bump:2.34867 Ang D6.OD1 and I10.CD1 Number of specific fragments= 1 total=1235 # 1di6A.79.81 read from T0191.t2k.frag # found chain 1di6A in template set T0191 79 :EIDKDAQLI 1di6A 82 :DVTPDATLA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1236 # 1e5kA.79.82 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 79 :EIDKDAQLI 1e5kA 83 :MLSVMQQEA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.51786 Ang Q8.O and L9.CD1 other bump:2.58571 Ang D4.CG and Q8.NE2 other bump:2.35967 Ang D4.OD2 and Q8.NE2 Number of specific fragments= 1 total=1237 # 1dpsD.79.78 read from T0191.t2k.frag # found chain 1dpsD in template set T0191 79 :EIDKDAQLI 1dpsD 79 :TMAERAVQL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1238 # 1dpsA.79.78 read from T0191.t2k.frag # found chain 1dpsA in template set T0191 79 :EIDKDAQLI 1dpsA 79 :TMAERAVQL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1239 # 1kpsB.80.80 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 80 :IDKDAQLIG 1kpsB 499 :LMKKAFSCS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1240 # 1pytA.80.83 read from T0191.t2k.frag # found chain 1pytA in template set T0191 80 :IDKDAQLIG 1pytA 89 :EQEQMFASQ Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.42852 Ang D5.CG and I9.CD1 other bump:2.22673 Ang D5.OD2 and I9.CD1 other bump:2.34868 Ang D5.OD1 and I9.CD1 Number of specific fragments= 1 total=1241 # 1di6A.80.82 read from T0191.t2k.frag # found chain 1di6A in template set T0191 80 :IDKDAQLIG 1di6A 83 :VTPDATLAV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1242 # 1e5kA.80.83 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 80 :IDKDAQLIG 1e5kA 84 :LSVMQQEAG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.6434 Ang I9.CG2 and G10.N neighbor-bump: 2.51786 Ang Q7.O and L8.CD1 other bump:2.58571 Ang D3.CG and Q7.NE2 other bump:2.35968 Ang D3.OD2 and Q7.NE2 Number of specific fragments= 1 total=1243 # 1gpmA.80.88 read from T0191.t2k.frag # found chain 1gpmA in template set T0191 80 :IDKDAQLIG 1gpmA 89 :MQTMAMQLG Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.6678 Ang D5.CG and I9.CD1 other bump:2.26077 Ang D5.OD2 and I9.CD1 other bump:2.45076 Ang D5.O and I9.CD1 Number of specific fragments= 1 total=1244 # 1jyeA.80.82 read from T0191.t2k.frag # found chain 1jyeA in template set T0191 80 :IDKDAQLIG 1jyeA 83 :ILSRADQLG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.69057 Ang D5.OD1 and I9.CD1 Number of specific fragments= 1 total=1245 # 1kpsB.81.81 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 81 :DKDAQLIGA 1kpsB 500 :MKKAFSCSS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1246 # 1pytA.81.84 read from T0191.t2k.frag # found chain 1pytA in template set T0191 81 :DKDAQLIGA 1pytA 90 :QEQMFASQS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.42852 Ang D4.CG and I8.CD1 other bump:2.34867 Ang D4.OD1 and I8.CD1 other bump:2.22673 Ang D4.OD2 and I8.CD1 Number of specific fragments= 1 total=1247 # 1di6A.81.83 read from T0191.t2k.frag # found chain 1di6A in template set T0191 81 :DKDAQLIGA 1di6A 84 :TPDATLAVA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1248 # 1jyeA.81.83 read from T0191.t2k.frag # found chain 1jyeA in template set T0191 81 :DKDAQLIGA 1jyeA 84 :LSRADQLGA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.69058 Ang D4.OD1 and I8.CD1 Number of specific fragments= 1 total=1249 # 1e5kA.81.84 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 81 :DKDAQLIGA 1e5kA 85 :SVMQQEAGE Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.6434 Ang I8.CG2 and G9.N neighbor-bump: 2.51786 Ang Q6.O and L7.CD1 Number of specific fragments= 1 total=1250 # 1gpmA.81.89 read from T0191.t2k.frag # found chain 1gpmA in template set T0191 81 :DKDAQLIGA 1gpmA 90 :QTMAMQLGG Fragment has 7 clashes (null) has 7 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.81917 Ang Q6.NE2 and G11.CA other bump:3.20236 Ang A5.CA and A10.CB other bump:3.0033 Ang A5.CB and A10.CB other bump:2.98388 Ang A5.C and A10.CB other bump:2.66781 Ang D4.CG and I8.CD1 other bump:2.26077 Ang D4.OD2 and I8.CD1 other bump:2.45076 Ang D4.O and I8.CD1 Number of specific fragments= 1 total=1251 # 1kpsB.82.82 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 82 :KDAQLIGAV 1kpsB 501 :KKAFSCSSF Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1252 # 1pytA.82.85 read from T0191.t2k.frag # found chain 1pytA in template set T0191 82 :KDAQLIGA 1pytA 91 :EQMFASQS Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues other bump:2.42852 Ang D3.CG and I7.CD1 other bump:2.34868 Ang D3.OD1 and I7.CD1 other bump:2.22674 Ang D3.OD2 and I7.CD1 Number of specific fragments= 1 total=1253 # 1chmA.82.85 read from T0191.t2k.frag # found chain 1chmA in template set T0191 82 :KD 1chmA 87 :PW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 86 :LIGAV 1chmA 91 :TVGTD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues self-bump: 1.35824 Ang I3.CA and I3.CB Number of specific fragments= 2 total=1255 Number of alignments=256 # 1di6A.82.84 read from T0191.t2k.frag # found chain 1di6A in template set T0191 82 :KDAQLIGAV 1di6A 85 :PDATLAVAD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1256 # 1kezA.82.86 read from T0191.t2k.frag # found chain 1kezA in template set T0191 82 :KDAQLIGAV 1kezA 87 :RLAGALRGI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.28764 Ang G8.O and A9.CB neighbor-bump: 2.67089 Ang G8.C and A9.CB other bump:3.03414 Ang D3.OD2 and I7.CD1 Number of specific fragments= 1 total=1257 # 1jyeA.82.84 read from T0191.t2k.frag # found chain 1jyeA in template set T0191 82 :KDAQLIGAV 1jyeA 85 :SRADQLGAS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.69057 Ang D3.OD1 and I7.CD1 Number of specific fragments= 1 total=1258 # 1chmA.83.86 read from T0191.t2k.frag # found chain 1chmA in template set T0191 83 :D 1chmA 88 :W Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues T0191 86 :LIGAVN 1chmA 91 :TVGTDN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues self-bump: 1.35824 Ang I3.CA and I3.CB Number of specific fragments= 2 total=1260 Number of alignments=257 # 1kpsB.83.83 read from T0191.t2k.frag # found chain 1kpsB in template set T0191 83 :DAQLIGAVN 1kpsB 502 :KAFSCSSFN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1261 # 1e5kA.83.86 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 83 :DAQLIGAVN 1e5kA 87 :MQQEAGEWF Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.6434 Ang I6.CG2 and G7.N neighbor-bump: 2.51786 Ang Q4.O and L5.CD1 Number of specific fragments= 1 total=1262 # 1gpmA.83.91 read from T0191.t2k.frag # found chain 1gpmA in template set T0191 83 :DAQLIGAVN 1gpmA 92 :MAMQLGGHV Fragment has 11 clashes (null) has 11 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.31434 Ang Q4.CG and N10.ND2 other bump:2.80454 Ang Q4.CD and N10.ND2 other bump:2.58242 Ang Q4.NE2 and N10.ND2 other bump:2.23186 Ang Q4.NE2 and N10.N other bump:2.81917 Ang Q4.NE2 and V9.CA other bump:3.20237 Ang A3.CA and A8.CB other bump:3.00331 Ang A3.CB and A8.CB other bump:2.98389 Ang A3.C and A8.CB other bump:2.66779 Ang D2.CG and I6.CD1 other bump:2.26077 Ang D2.OD2 and I6.CD1 other bump:2.45076 Ang D2.O and I6.CD1 Number of specific fragments= 1 total=1263 # 1aps.83.28 read from T0191.t2k.frag # found chain 1aps in template set T0191 83 :DAQLIGAVN 1aps 29 :EARKIGVVG Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.69391 Ang N10.OD1 and G11.CA neighbor-bump: 2.41884 Ang N10.CG and G11.N neighbor-bump: 1.94965 Ang N10.OD1 and G11.N neighbor-bump: 2.69263 Ang V9.C and N10.CB Number of specific fragments= 1 total=1264 # 1jyeA.83.85 read from T0191.t2k.frag # found chain 1jyeA in template set T0191 83 :DAQLIGAVN 1jyeA 86 :RADQLGASV Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.59208 Ang A3.CB and N10.ND2 other bump:2.65702 Ang D2.OD1 and I6.CD1 other bump:3.05639 Ang D2.OD2 and I6.CD1 Number of specific fragments= 1 total=1265 # 1chmA.84.87 read from T0191.t2k.frag # found chain 1chmA in template set T0191 86 :LIGAVN 1chmA 91 :TVGTDN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues self-bump: 1.35824 Ang I3.CA and I3.CB Number of specific fragments= 1 total=1266 # 1e5kA.84.87 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 84 :AQLIGAVNT 1e5kA 88 :QQEAGEWFL Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.6434 Ang I5.CG2 and G6.N neighbor-bump: 2.51786 Ang Q3.O and L4.CD1 Number of specific fragments= 1 total=1267 # 1aps.84.29 read from T0191.t2k.frag # found chain 1aps in template set T0191 84 :AQLIGAVNT 1aps 30 :ARKIGVVGW Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.25112 Ang N9.ND2 and T10.O neighbor-bump: 2.43469 Ang N9.CG and T10.N Number of specific fragments= 1 total=1268 # 1hg3A.84.83 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 84 :AQLIGAVNT 1hg3A 84 :VKEAGAVGT Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.82173 Ang V8.CG2 and N9.ND2 other bump:2.45942 Ang G1.O and I5.CD1 Number of specific fragments= 1 total=1269 # 2eng.84.82 read from T0191.t2k.frag # found chain 2eng in training set T0191 84 :AQLIGAVNT 2eng 83 :AGWCCACYE Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 3.14622 Ang I5.CG2 and G6.CA neighbor-bump: 2.00982 Ang I5.CG2 and G6.N self-bump: 2.39094 Ang I5.CG2 and I5.C self-bump: 1.36599 Ang I5.CA and I5.CB Number of specific fragments= 1 total=1270 # 1gpmA.84.92 read from T0191.t2k.frag # found chain 1gpmA in template set T0191 84 :AQLIGAVNT 1gpmA 93 :AMQLGGHVE Fragment has 9 clashes (null) has 9 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.58244 Ang Q3.NE2 and N9.ND2 other bump:2.80457 Ang Q3.CD and N9.ND2 other bump:2.31436 Ang Q3.CG and N9.ND2 other bump:2.23186 Ang Q3.NE2 and N9.N other bump:2.81917 Ang Q3.NE2 and V8.CA other bump:3.00331 Ang A2.CB and A7.CB other bump:3.20237 Ang A2.CA and A7.CB other bump:2.98389 Ang A2.C and A7.CB other bump:2.45076 Ang G1.O and I5.CD1 Number of specific fragments= 1 total=1271 # 1chmA.85.88 read from T0191.t2k.frag # found chain 1chmA in template set T0191 86 :LIGAVN 1chmA 91 :TVGTDN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues self-bump: 1.35824 Ang I3.CA and I3.CB Number of specific fragments= 1 total=1272 # 1hg3A.85.84 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 85 :QLIGAVNTI 1hg3A 85 :KEAGAVGTL Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.82173 Ang V7.CG2 and N8.ND2 Number of specific fragments= 1 total=1273 # 1e5kA.85.88 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 85 :QLIGAVNTI 1e5kA 89 :QEAGEWFLF Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.6434 Ang I4.CG2 and G5.N neighbor-bump: 2.51786 Ang Q2.O and L3.CD1 Number of specific fragments= 1 total=1274 # 1aps.85.30 read from T0191.t2k.frag # found chain 1aps in template set T0191 85 :QLIGAVNTI 1aps 31 :RKIGVVGWV Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.25112 Ang N8.ND2 and T9.O neighbor-bump: 2.43469 Ang N8.CG and T9.N Number of specific fragments= 1 total=1275 # 2eng.85.83 read from T0191.t2k.frag # found chain 2eng in training set T0191 85 :QLIGAVNTI 2eng 84 :GWCCACYEL Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 3.14622 Ang I4.CG2 and G5.CA neighbor-bump: 2.00982 Ang I4.CG2 and G5.N self-bump: 2.39094 Ang I4.CG2 and I4.C self-bump: 1.36599 Ang I4.CA and I4.CB Number of specific fragments= 1 total=1276 # 1nhkL.85.86 read from T0191.t2k.frag # found chain 1nhkL in template set T0191 85 :QLIGAVNTI 1nhkL 88 :DIMGATNPA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1277 # 1chmA.86.89 read from T0191.t2k.frag # found chain 1chmA in template set T0191 86 :LIGAVN 1chmA 91 :TVGTDN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues self-bump: 1.35824 Ang I3.CA and I3.CB T0191 94 :K 1chmA 99 :Y Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues Number of specific fragments= 2 total=1279 Number of alignments=258 # 1smpI.86.89 read from T0191.t2k.frag # found chain 1smpI in template set T0191 86 :LIGAVNTIK 1smpI 90 :VDGSVRTLK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1280 # 1e5kA.86.89 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 86 :LIGAVNTIK 1e5kA 90 :EAGEWFLFC Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.6434 Ang I3.CG2 and G4.N Number of specific fragments= 1 total=1281 # 1cvjB.86.94 read from T0191.t2k.frag # found chain 1cvjB in template set T0191 86 :LIGAVNTIK 1cvjB 95 :KSGVGNIFI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.21223 Ang I3.O and A5.N Number of specific fragments= 1 total=1282 # 1hg3A.86.85 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 86 :LIGAVNTIK 1hg3A 86 :EAGAVGTLL Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.20904 Ang T8.CG2 and K10.NZ neighbor-bump: 2.82173 Ang V6.CG2 and N7.ND2 Number of specific fragments= 1 total=1283 # 2eng.86.84 read from T0191.t2k.frag # found chain 2eng in training set T0191 86 :LIGAVNTIK 2eng 85 :WCCACYELT Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 3.14622 Ang I3.CG2 and G4.CA neighbor-bump: 2.00982 Ang I3.CG2 and G4.N self-bump: 2.39094 Ang I3.CG2 and I3.C self-bump: 1.36599 Ang I3.CA and I3.CB Number of specific fragments= 1 total=1284 # 1chmA.87.90 read from T0191.t2k.frag # found chain 1chmA in template set T0191 87 :IGAVN 1chmA 92 :VGTDN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues T0191 94 :KI 1chmA 99 :YT Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues Number of specific fragments= 2 total=1286 Number of alignments=259 # 1smpI.87.90 read from T0191.t2k.frag # found chain 1smpI in template set T0191 87 :IGAVNTIKI 1smpI 91 :DGSVRTLKK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1287 # 1e5kA.87.90 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 87 :IGAVNTIKI 1e5kA 91 :AGEWFLFCP Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.64341 Ang I2.CG2 and G3.N Number of specific fragments= 1 total=1288 # 1fl2A.87.87 read from T0191.t2k.frag # found chain 1fl2A in template set T0191 87 :IGAVNTIKI 1fl2A 299 :EGGLHQIET Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1289 # 1grj.87.87 read from T0191.t2k.frag # found chain 1grj in template set T0191 87 :IGAVNTIKI 1grj 88 :FGATVTVLN Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.09354 Ang I2.CG2 and G3.N self-bump: 2.39233 Ang I2.CG2 and I2.C self-bump: 1.31903 Ang I2.CA and I2.CB Number of specific fragments= 1 total=1290 # 1cvjB.87.95 read from T0191.t2k.frag # found chain 1cvjB in template set T0191 87 :IGAVNTIKI 1cvjB 96 :SGVGNIFIK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.21223 Ang I2.O and A4.N Number of specific fragments= 1 total=1291 # 1chmA.88.91 read from T0191.t2k.frag # found chain 1chmA in template set T0191 88 :GAVN 1chmA 93 :GTDN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues T0191 94 :KIE 1chmA 99 :YTD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues Number of specific fragments= 2 total=1293 Number of alignments=260 # 1smpI.88.91 read from T0191.t2k.frag # found chain 1smpI in template set T0191 88 :GAVNTIKI 1smpI 92 :GSVRTLKK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 10 residues Number of specific fragments= 1 total=1294 # 1grj.88.88 read from T0191.t2k.frag # found chain 1grj in template set T0191 88 :GAVNTIKIE 1grj 89 :GATVTVLNL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1295 # 1fvzA.88.92 read from T0191.t2k.frag # found chain 1fvzA in template set T0191 88 :GAVNTIKIE 1fvzA 93 :PYCRTVITN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1296 # 1fl2A.88.88 read from T0191.t2k.frag # found chain 1fl2A in template set T0191 88 :GAVNTIKIE 1fl2A 300 :GGLHQIETA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1297 # 1lkfA.88.91 read from T0191.t2k.frag # found chain 1lkfA in training set T0191 88 :GAVNTIKIE 1lkfA 92 :DSVNVVDYA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.38348 Ang K8.O and I9.CG2 neighbor-bump: 2.88392 Ang K8.C and I9.CG2 Number of specific fragments= 1 total=1298 # 1chmA.89.92 read from T0191.t2k.frag # found chain 1chmA in template set T0191 89 :AVN 1chmA 94 :TDN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 5 residues T0191 94 :KIED 1chmA 99 :YTDW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 6 residues Number of specific fragments= 2 total=1300 Number of alignments=261 # 1fvzA.89.93 read from T0191.t2k.frag # found chain 1fvzA in template set T0191 89 :AVNTIKIED 1fvzA 94 :YCRTVITNE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1301 # 1smpI.89.92 read from T0191.t2k.frag # found chain 1smpI in template set T0191 89 :AVNTIKI 1smpI 93 :SVRTLKK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 9 residues Number of specific fragments= 1 total=1302 # 1ddlA.89.89 read from T0191.t2k.frag # found chain 1ddlA in template set T0191 89 :AVNTIKIED 1ddlA 90 :SVALVWVPA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.56845 Ang T5.O and I6.CG2 Number of specific fragments= 1 total=1303 # 1grj.89.89 read from T0191.t2k.frag # found chain 1grj in template set T0191 89 :AVNTIKIED 1grj 90 :ATVTVLNLD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1304 # 1e5kA.89.92 read from T0191.t2k.frag # found chain 1e5kA in template set T0191 89 :AVNTIKIED 1e5kA 93 :EWFLFCPCD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.32667 Ang I8.CG2 and D10.OD1 Number of specific fragments= 1 total=1305 # 1chmA.90.93 read from T0191.t2k.frag # found chain 1chmA in template set T0191 90 :VN 1chmA 95 :DN Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 4 residues T0191 94 :KIEDG 1chmA 99 :YTDWQ Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 7 residues other bump:2.45861 Ang I3.CD1 and D5.OD2 Number of specific fragments= 2 total=1307 Number of alignments=262 # 1fvzA.90.94 read from T0191.t2k.frag # found chain 1fvzA in template set T0191 90 :VNTIKIEDG 1fvzA 95 :CRTVITNEY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1308 # 1awe.90.92 read from T0191.t2k.frag # found chain 1awe in template set T0191 90 :VNTIKIEDG 1awe 114 :FEIILKDEN Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.89731 Ang I7.CG2 and E8.CA neighbor-bump: 2.42829 Ang I7.CB and E8.N neighbor-bump: 1.71154 Ang I7.CG2 and E8.N self-bump: 2.33544 Ang I7.CG2 and I7.C neighbor-bump: 2.60861 Ang K6.C and I7.O self-bump: 1.30216 Ang I7.CA and I7.CB Number of specific fragments= 1 total=1309 # 1sacA.90.92 read from T0191.t2k.frag # found chain 1sacA in template set T0191 90 :VNTIKIEDG 1sacA 93 :HICVSWESS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1310 # 1ddlA.90.90 read from T0191.t2k.frag # found chain 1ddlA in template set T0191 90 :VNTIKIEDG 1ddlA 91 :VALVWVPAN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.56845 Ang T4.O and I5.CG2 Number of specific fragments= 1 total=1311 # 1cb6A.90.93 read from T0191.t2k.frag # found chain 1cb6A in template set T0191 90 :VNTIKIEDG 1cb6A 1094 :AVAVVKKGG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.18759 Ang E8.O and D9.CG Number of specific fragments= 1 total=1312 # 1fvzA.91.95 read from T0191.t2k.frag # found chain 1fvzA in template set T0191 91 :NTIKIEDGK 1fvzA 96 :RTVITNEYM Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1313 # 1awe.91.92 read from T0191.t2k.frag # found chain 1awe in template set T0191 91 :NTIKIEDGK 1awe 114 :FEIILKDEN Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.60861 Ang I6.C and E7.O other bump:2.04865 Ang N2.ND2 and I4.CD1 Number of specific fragments= 1 total=1314 # 1chmA.91.94 read from T0191.t2k.frag # found chain 1chmA in template set T0191 91 :N 1chmA 96 :N Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 3 residues T0191 94 :KIEDGK 1chmA 99 :YTDWQR Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 8 residues other bump:2.45861 Ang I3.CD1 and D5.OD2 Number of specific fragments= 2 total=1316 Number of alignments=263 # 1sacA.91.93 read from T0191.t2k.frag # found chain 1sacA in template set T0191 91 :NTIKIEDGK 1sacA 94 :ICVSWESSS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1317 # 1rdzA.91.91 read from T0191.t2k.frag # found chain 1rdzA in template set T0191 91 :NTIKIEDGK 1rdzA 92 :CVLVTEEDK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1318 # 1cb6A.91.94 read from T0191.t2k.frag # found chain 1cb6A in template set T0191 91 :NTIKIEDGK 1cb6A 1095 :VAVVKKGGS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.18759 Ang E7.O and D8.CG Number of specific fragments= 1 total=1319 # 1awe.92.93 read from T0191.t2k.frag # found chain 1awe in template set T0191 92 :TIKIEDGKA 1awe 115 :EIILKDENS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.60861 Ang I5.C and E6.O Number of specific fragments= 1 total=1320 # 1sacA.92.94 read from T0191.t2k.frag # found chain 1sacA in template set T0191 92 :TIKIEDGKA 1sacA 95 :CVSWESSSG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.30419 Ang K9.O and A10.CB neighbor-bump: 2.62066 Ang K9.C and A10.CB Number of specific fragments= 1 total=1321 # 1hslA.92.93 read from T0191.t2k.frag # found chain 1hslA in template set T0191 92 :TIKIEDGKA 1hslA 94 :LVVAKNSDI Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.82991 Ang K4.CE and A10.CB neighbor-bump: 2.09182 Ang G8.CA and K9.N other bump:3.02498 Ang T2.CG2 and K4.NZ Number of specific fragments= 1 total=1322 # 1ddlA.92.92 read from T0191.t2k.frag # found chain 1ddlA in template set T0191 92 :TIKIEDGKA 1ddlA 93 :LVWVPANST Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.48207 Ang I5.CG2 and K9.CG other bump:2.44038 Ang I5.CG2 and K9.CB neighbor-bump: 2.56845 Ang T2.O and I3.CG2 Number of specific fragments= 1 total=1323 # 1lst.92.92 read from T0191.t2k.frag # found chain 1lst in training set T0191 92 :TIKIEDGKA 1lst 93 :RLIAAKGSP Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.8616 Ang E6.N and K9.CE other bump:2.42454 Ang E6.CB and K9.CE other bump:2.8463 Ang E6.N and K9.CD other bump:2.96372 Ang I5.CD1 and K9.CB Number of specific fragments= 1 total=1324 # 1omp.92.94 read from T0191.t2k.frag # found chain 1omp in template set T0191 92 :TIKIEDGKA 1omp 95 :DAVRYNGKL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1325 # 1omp.93.95 read from T0191.t2k.frag # found chain 1omp in template set T0191 93 :IKIEDGKAI 1omp 96 :AVRYNGKLI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1326 # 1sacA.93.95 read from T0191.t2k.frag # found chain 1sacA in template set T0191 93 :IKIEDGKAI 1sacA 96 :VSWESSSGI Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.3042 Ang K8.O and A9.CB neighbor-bump: 2.62066 Ang K8.C and A9.CB Number of specific fragments= 1 total=1327 # 1hslA.93.94 read from T0191.t2k.frag # found chain 1hslA in template set T0191 93 :IKIEDGKAI 1hslA 95 :VVAKNSDIQ Fragment has 4 clashes (null) has 4 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.75977 Ang I10.CG2 and G11.N other bump:2.68154 Ang K8.CG and I10.CG1 other bump:2.82992 Ang K3.CE and A9.CB neighbor-bump: 2.09182 Ang G7.CA and K8.N Number of specific fragments= 1 total=1328 # 1faaA.93.95 read from T0191.t2k.frag # found chain 1faaA in template set T0191 93 :IKIEDGKAI 1faaA 93 :KILKENSVV Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.64764 Ang E5.CB and I10.CD1 Number of specific fragments= 1 total=1329 # 1c0pA.93.95 read from T0191.t2k.frag # found chain 1c0pA in template set T0191 93 :IKIEDGKAI 1c0pA 1094 :RRFAQNEDG Fragment has 22 clashes (null) has 22 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.64729 Ang E5.OE1 and G11.CA other bump:2.91494 Ang E5.CD and G11.N other bump:1.8266 Ang E5.OE1 and G11.N other bump:1.97214 Ang E5.OE1 and I10.C other bump:2.35269 Ang E5.CG and I10.CD1 other bump:2.05053 Ang E5.CA and I10.CD1 other bump:1.76604 Ang E5.CB and I10.CD1 other bump:1.81875 Ang E5.C and I10.CD1 other bump:2.82789 Ang D6.CA and I10.CD1 other bump:2.6168 Ang G7.N and I10.CD1 other bump:1.64692 Ang D6.N and I10.CD1 other bump:2.41965 Ang E5.CD and I10.CG1 other bump:2.25575 Ang E5.OE1 and I10.CG1 other bump:2.24225 Ang E5.CG and I10.CG1 other bump:2.17565 Ang G7.O and I10.CG1 other bump:2.01346 Ang E5.CB and I10.CG1 other bump:2.99553 Ang G7.N and I10.CG1 other bump:3.10095 Ang D6.N and I10.CG1 other bump:2.76726 Ang E5.OE1 and I10.CB other bump:2.8912 Ang E5.CB and I10.CB other bump:2.59125 Ang E5.OE1 and I10.CA other bump:2.43247 Ang E5.CD and G7.O Number of specific fragments= 1 total=1330 # 1trb.93.95 read from T0191.t2k.frag # found chain 1trb in template set T0191 93 :IKIEDGKAI 1trb 96 :LNGDNGEYT Fragment has 6 clashes (null) has 6 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87368 Ang I4.CG1 and G7.C other bump:2.13573 Ang I4.CG1 and G7.O other bump:3.21005 Ang I4.CG1 and G7.CA other bump:2.63719 Ang I4.CG1 and G7.N other bump:2.81997 Ang I4.CD1 and G7.N other bump:2.90973 Ang I4.CD1 and D6.C Number of specific fragments= 1 total=1331 # 1omp.94.96 read from T0191.t2k.frag # found chain 1omp in template set T0191 94 :KIEDGKAIG 1omp 97 :VRYNGKLIA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1332 # 1faaA.94.96 read from T0191.t2k.frag # found chain 1faaA in template set T0191 94 :KIEDGKAIG 1faaA 94 :ILKENSVVG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1333 # 3aig.94.100 read from T0191.t2k.frag # found chain 3aig in template set T0191 94 :KIEDGKAIG 3aig 101 :INFEGKIIG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87625 Ang E4.OE1 and A8.CB Number of specific fragments= 1 total=1334 # 1hg3A.94.95 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 94 :KIEDGKAIG 1hg3A 96 :HSENRMILA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1335 # 2mllB.94.96 read from T0191.t2k.frag # found chain 2mllB in template set T0191 94 :KIEDGKAIG 2mllB 97 :NPRSNLVLA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11196 Ang D5.CG and K7.N other bump:2.261 Ang D5.OD1 and K7.N Number of specific fragments= 1 total=1336 # 1anf.94.96 read from T0191.t2k.frag # found chain 1anf in training set T0191 94 :KIEDGKAIG 1anf 97 :VRYNGKLIA Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1337 # 2mllB.95.97 read from T0191.t2k.frag # found chain 2mllB in template set T0191 95 :IEDGKAIGY 2mllB 98 :PRSNLVLAA Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11195 Ang D4.CG and K6.N other bump:2.261 Ang D4.OD1 and K6.N Number of specific fragments= 1 total=1338 # 1faaA.95.97 read from T0191.t2k.frag # found chain 1faaA in template set T0191 95 :IEDGKAIGY 1faaA 95 :LKENSVVGE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1339 # 3aig.95.101 read from T0191.t2k.frag # found chain 3aig in template set T0191 95 :IEDGKAIGY 3aig 102 :NFEGKIIGK Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87625 Ang E3.OE1 and A7.CB Number of specific fragments= 1 total=1340 # 1hg3A.95.96 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 95 :IEDGKAIGY 1hg3A 97 :SENRMILAD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1341 # 1omp.95.97 read from T0191.t2k.frag # found chain 1omp in template set T0191 95 :IEDGKAIGY 1omp 98 :RYNGKLIAY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1342 # 1ewjA.95.96 read from T0191.t2k.frag # found chain 1ewjA in template set T0191 95 :IEDGKAIGY 1ewjA 97 :QEWGGTMAA Fragment has 3 clashes (null) has 3 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.01011 Ang I2.CD1 and I8.CG1 other bump:2.70176 Ang I2.CD1 and I8.CB other bump:2.69552 Ang I2.CG2 and D4.OD2 Number of specific fragments= 1 total=1343 # 1faaA.96.98 read from T0191.t2k.frag # found chain 1faaA in template set T0191 96 :EDGKAIGYN 1faaA 96 :KENSVVGEV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1344 # 2mllB.96.98 read from T0191.t2k.frag # found chain 2mllB in template set T0191 96 :EDGKAIGYN 2mllB 99 :RSNLVLAAS Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:3.11195 Ang D3.CG and K5.N other bump:2.261 Ang D3.OD1 and K5.N Number of specific fragments= 1 total=1345 # 3aig.96.102 read from T0191.t2k.frag # found chain 3aig in template set T0191 96 :EDGKAIGYN 3aig 103 :FEGKIIGKA Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.87625 Ang E2.OE1 and A6.CB Number of specific fragments= 1 total=1346 # 1ewjA.96.97 read from T0191.t2k.frag # found chain 1ewjA in template set T0191 96 :EDGKAIGYN 1ewjA 98 :EWGGTMAAL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1347 # 1hg3A.96.97 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 96 :EDGKAIGYN 1hg3A 98 :ENRMILADL Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1348 # 1omp.96.98 read from T0191.t2k.frag # found chain 1omp in template set T0191 96 :EDGKAIGYN 1omp 99 :YNGKLIAYP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1349 # 2mllB.97.99 read from T0191.t2k.frag # found chain 2mllB in template set T0191 97 :DGKAIGYNT 2mllB 100 :SNLVLAASS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1350 # 1ewjA.97.98 read from T0191.t2k.frag # found chain 1ewjA in template set T0191 97 :DGKAIGYNT 1ewjA 99 :WGGTMAALV Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1351 # 1faaA.97.99 read from T0191.t2k.frag # found chain 1faaA in template set T0191 97 :DGKAIGYNT 1faaA 97 :ENSVVGEVT Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.01935 Ang Y8.CE1 and T10.CG2 other bump:2.52257 Ang Y8.CZ and T10.CG2 Number of specific fragments= 1 total=1352 # 3aig.97.103 read from T0191.t2k.frag # found chain 3aig in template set T0191 97 :DGKAIGYNT 3aig 104 :EGKIIGKAY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1353 # 1hg3A.97.98 read from T0191.t2k.frag # found chain 1hg3A in template set T0191 97 :DGKAIGYNT 1hg3A 99 :NRMILADLE Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1354 # 1a3yA.97.105 read from T0191.t2k.frag # found chain 1a3yA in template set T0191 97 :DGKAIGYNT 1a3yA 114 :MTGLLGKGT Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.09642 Ang N9.OD1 and G11.N Number of specific fragments= 1 total=1355 # 2mllB.98.100 read from T0191.t2k.frag # found chain 2mllB in template set T0191 98 :GKAIGYNTD 2mllB 101 :NLVLAASSG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1356 # 1a3yA.98.106 read from T0191.t2k.frag # found chain 1a3yA in template set T0191 98 :GKAIGYNTD 1a3yA 115 :TGLLGKGTD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.09642 Ang N8.OD1 and D10.N Number of specific fragments= 1 total=1357 # 1ewjA.98.99 read from T0191.t2k.frag # found chain 1ewjA in template set T0191 98 :GKAIGYNTD 1ewjA 100 :GGTMAALVD Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1358 # 1qd6C.98.105 read from T0191.t2k.frag # found chain 1qd6C in template set T0191 98 :GKAIGYNTD 1qd6C 135 :DVEMGYNHD Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92106 Ang Y7.CZ and T9.CG2 Number of specific fragments= 1 total=1359 # 3aig.98.104 read from T0191.t2k.frag # found chain 3aig in template set T0191 98 :GKAIGYNTD 3aig 105 :GKIIGKAYT Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1360 # 1faaA.98.100 read from T0191.t2k.frag # found chain 1faaA in template set T0191 98 :GKAIGYNTD 1faaA 98 :NSVVGEVTG Fragment has 2 clashes (null) has 2 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.01935 Ang Y7.CE1 and T9.CG2 other bump:2.52257 Ang Y7.CZ and T9.CG2 Number of specific fragments= 1 total=1361 # 1a3yA.99.107 read from T0191.t2k.frag # found chain 1a3yA in template set T0191 99 :KAIGYNTDG 1a3yA 116 :GLLGKGTDI Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.09642 Ang N7.OD1 and D9.N Number of specific fragments= 1 total=1362 # 1qd6C.99.106 read from T0191.t2k.frag # found chain 1qd6C in template set T0191 99 :KAIGYNTDG 1qd6C 136 :VEMGYNHDS Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92106 Ang Y6.CZ and T8.CG2 Number of specific fragments= 1 total=1363 # 2mllB.99.101 read from T0191.t2k.frag # found chain 2mllB in template set T0191 99 :KAIGYNTDG 2mllB 102 :LVLAASSGI Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1364 # 1awsA.99.99 read from T0191.t2k.frag # found chain 1awsA in template set T0191 99 :KAIGYNTDG 1awsA 1101 :ANAGPNTNG Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.71949 Ang A3.CB and D9.OD1 neighbor-bump: 2.54139 Ang Y6.CE1 and N7.OD1 neighbor-bump: 2.20659 Ang Y6.CD1 and N7.ND2 neighbor-bump: 1.95615 Ang Y6.CE1 and N7.ND2 neighbor-bump: 2.92132 Ang Y6.CE2 and N7.ND2 neighbor-bump: 2.37617 Ang Y6.CZ and N7.ND2 neighbor-bump: 2.66292 Ang Y6.CD1 and N7.CG neighbor-bump: 2.34681 Ang Y6.CE1 and N7.CG Number of specific fragments= 1 total=1365 # 1ewjA.99.100 read from T0191.t2k.frag # found chain 1ewjA in template set T0191 99 :KAIGYNTDG 1ewjA 101 :GTMAALVDP Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1366 # 1e6oH.99.100 read from T0191.t2k.frag # found chain 1e6oH in template set T0191 99 :KAIGYNTDG 1e6oH 101 :VRLGYNFDY Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1367 # 1qd6C.100.107 read from T0191.t2k.frag # found chain 1qd6C in template set T0191 100 :AIGYNTDGI 1qd6C 137 :EMGYNHDSN Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92106 Ang Y5.CZ and T7.CG2 Number of specific fragments= 1 total=1368 # 1a3yA.100.108 read from T0191.t2k.frag # found chain 1a3yA in template set T0191 100 :AIGYNTDGI 1a3yA 117 :LLGKGTDIE Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.09642 Ang N6.OD1 and D8.N Number of specific fragments= 1 total=1369 # 1i9aA.100.101 read from T0191.t2k.frag # found chain 1i9aA in template set T0191 100 :AIGYNTDGI 1i9aA 102 :FRYRATDPS Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1370 # 2mllB.100.102 read from T0191.t2k.frag # found chain 2mllB in template set T0191 100 :AIGYNTDGI 2mllB 103 :VLAASSGIK Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1371 # 1e6oH.100.101 read from T0191.t2k.frag # found chain 1e6oH in template set T0191 100 :AIGYNTDGI 1e6oH 102 :RLGYNFDYW Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1372 # 1awsA.100.100 read from T0191.t2k.frag # found chain 1awsA in template set T0191 100 :AIGYNTDGI 1awsA 1102 :NAGPNTNGS Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.71949 Ang A2.CB and D8.OD1 neighbor-bump: 2.54139 Ang Y5.CE1 and N6.OD1 neighbor-bump: 2.20659 Ang Y5.CD1 and N6.ND2 neighbor-bump: 1.95615 Ang Y5.CE1 and N6.ND2 neighbor-bump: 2.92132 Ang Y5.CE2 and N6.ND2 neighbor-bump: 2.37617 Ang Y5.CZ and N6.ND2 neighbor-bump: 2.66292 Ang Y5.CD1 and N6.CG neighbor-bump: 2.34681 Ang Y5.CE1 and N6.CG Number of specific fragments= 1 total=1373 # 1qd6C.101.108 read from T0191.t2k.frag # found chain 1qd6C in template set T0191 101 :IGYNTDGIG 1qd6C 138 :MGYNHDSNG Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.92106 Ang Y4.CZ and T6.CG2 Number of specific fragments= 1 total=1374 # 1a3yA.101.109 read from T0191.t2k.frag # found chain 1a3yA in template set T0191 101 :IGYNTDGIG 1a3yA 118 :LGKGTDIED Fragment has 1 clashes (null) has 1 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues other bump:2.09642 Ang N5.OD1 and D7.N Number of specific fragments= 1 total=1375 # 1i9aA.101.102 read from T0191.t2k.frag # found chain 1i9aA in template set T0191 101 :IGYNTDGIG 1i9aA 103 :RYRATDPSG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1376 # 1e6oH.101.102 read from T0191.t2k.frag # found chain 1e6oH in template set T0191 101 :IGYNTDGIG 1e6oH 103 :LGYNFDYWG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1377 # 2mllB.101.103 read from T0191.t2k.frag # found chain 2mllB in template set T0191 101 :IGYNTDGIG 2mllB 104 :LAASSGIKG Fragment has 0 clashes (null) has 0 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues Number of specific fragments= 1 total=1378 # 1awsA.101.101 read from T0191.t2k.frag # found chain 1awsA in template set T0191 101 :IGYNTDGIG 1awsA 1103 :AGPNTNGSQ Fragment has 8 clashes (null) has 8 clashes, 0 disulphide bonds, and 0 hydrogen bonds in 11 residues neighbor-bump: 2.54139 Ang Y4.CE1 and N5.OD1 neighbor-bump: 2.20659 Ang Y4.CD1 and N5.ND2 neighbor-bump: 1.95615 Ang Y4.CE1 and N5.ND2 neighbor-bump: 2.92132 Ang Y4.CE2 and N5.ND2 neighbor-bump: 2.37617 Ang Y4.CZ and N5.ND2 neighbor-bump: 2.66292 Ang Y4.CD1 and N5.CG neighbor-bump: 2.34681 Ang Y4.CE1 and N5.CG self-bump: 1.39425 Ang I2.CA and I2.CB Number of specific fragments= 1 total=1379 # command:# Prefix for output files set to # command:# Printing 86 template chains to Template.atoms # Printed template library # command:# Prefix for output files set to decoys/ # command:CPU_time= 67920 msec, elapsed time= 71537.5 msec) # command:# Setting InsertAlignment to 0.1 # Setting OneRotamer to 0.01 # Setting ClashingRotamer to 0.5 # Setting InsertFragment to 5 # Setting CrossAndInsert to 5 # Setting CrossOver to 0 # Setting TwoFragment to 10 # Setting InsertSpecificFragment to 8 # Setting ReduceBreak to 1 # Setting CloseGap to 0.1 # Setting ReduceClash to 5 # Setting ReduceConstraint to 5 # Setting JiggleSubtree to 0.03 # Setting OptSubtree to 0.03 # Setting InsertSSBond to 0 # Setting ImproveSSBond to 0 # Initial Method pseudocounts set to # InsertAlignment 0.1 # InsertSpecificFragment 8 # InsertFragment 5 # TwoFragment 10 # CrossOver 0 # CrossAndInsert 5 # ReduceClash 5 # OneRotamer 0.01 # ClashingRotamer 0.5 # ReduceBreak 1 # CloseGap 0.1 # JiggleSubtree 0.03 # OptSubtree 0.03 # ReduceConstraint 5 # InsertSSBond 0 # ImproveSSBond 0 # command:# naming current conformation T0191.try5 # command:# OptConform to optimize cost = # ( 0.2 * gen6.5(6.5) + 1 * wet6.5(6.5, /log(length)) + 3 * dry5(5) + 11 * dry6.5(6.5) + 4 * dry8(8) + 1 * dry12(12) + 0.5 * phobic_fit + 0.2 * sidechain + 1.5 * clashes + -0.2 * sidechain_clashes + 0.5 * backbone_clashes + 10 * break + 1 * pred_alpha2 + 0.1 * constraints + 1 * contact_order ) # Will do 1 iterations of optimization # iteration 0 # filling pool to have 40 conformations # best score in initial pool out of 40: T0191.try5 at pool[3] 73.3958 cost/residue, 245 clashes 0.346449 breaks # optimizing backbone with 40 conformations in pool # doing 200 generations, with 200 new conformations in each generation. # keep at most 16 conformations from old pool # generation 1: best score out of 40: T0191.try5 73.3958 cost/residue, 245 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 7 ## InsertFragment 6 ## TwoFragment 10 ## CrossOver 0 ## CrossAndInsert 4 ## ReduceClash 8 ## OneRotamer 0 ## ClashingRotamer 0 ## ReduceBreak 0 ## CloseGap 0 ## JiggleSubtree 0 ## OptSubtree 0 ## ReduceConstraint 2 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 2: best score out of 40: T0191.try5 73.3958 cost/residue, 245 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 8 ## InsertFragment 14 ## TwoFragment 15 ## CrossOver 0 ## CrossAndInsert 6 ## ReduceClash 18 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 0 ## JiggleSubtree 0 ## OptSubtree 0 ## ReduceConstraint 3 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 3: best score out of 40: T0191.try5 73.3958 cost/residue, 245 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 8 ## InsertFragment 20 ## TwoFragment 19 ## CrossOver 0 ## CrossAndInsert 10 ## ReduceClash 27 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 1 ## JiggleSubtree 0 ## OptSubtree 0 ## ReduceConstraint 3 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 4: best score out of 40: T0191.try5 73.3958 cost/residue, 245 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 8 ## InsertFragment 25 ## TwoFragment 23 ## CrossOver 0 ## CrossAndInsert 16 ## ReduceClash 33 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 1 ## JiggleSubtree 1 ## OptSubtree 0 ## ReduceConstraint 5 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 5: best score out of 40: T0191.try5 73.3958 cost/residue, 245 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 9 ## InsertFragment 30 ## TwoFragment 25 ## CrossOver 0 ## CrossAndInsert 21 ## ReduceClash 40 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 1 ## JiggleSubtree 2 ## OptSubtree 0 ## ReduceConstraint 8 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 6: best score out of 40: T0191.try5 73.3906 cost/residue, 248 clashes 0.332755 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 10 ## InsertFragment 36 ## TwoFragment 29 ## CrossOver 0 ## CrossAndInsert 24 ## ReduceClash 45 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 2 ## JiggleSubtree 2 ## OptSubtree 1 ## ReduceConstraint 11 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 7: best score out of 40: T0191.try5 73.3906 cost/residue, 248 clashes 0.332755 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 10 ## InsertFragment 43 ## TwoFragment 32 ## CrossOver 0 ## CrossAndInsert 26 ## ReduceClash 53 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 2 ## JiggleSubtree 3 ## OptSubtree 1 ## ReduceConstraint 14 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 8: best score out of 40: T0191.try5 73.3906 cost/residue, 248 clashes 0.332755 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 12 ## InsertFragment 54 ## TwoFragment 33 ## CrossOver 0 ## CrossAndInsert 28 ## ReduceClash 57 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 3 ## JiggleSubtree 3 ## OptSubtree 1 ## ReduceConstraint 17 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 9: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 14 ## InsertFragment 62 ## TwoFragment 35 ## CrossOver 0 ## CrossAndInsert 33 ## ReduceClash 63 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 3 ## JiggleSubtree 4 ## OptSubtree 1 ## ReduceConstraint 17 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 10: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 15 ## InsertFragment 76 ## TwoFragment 37 ## CrossOver 0 ## CrossAndInsert 33 ## ReduceClash 69 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 3 ## JiggleSubtree 5 ## OptSubtree 1 ## ReduceConstraint 17 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 11: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 17 ## InsertFragment 82 ## TwoFragment 40 ## CrossOver 0 ## CrossAndInsert 37 ## ReduceClash 76 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 3 ## JiggleSubtree 6 ## OptSubtree 1 ## ReduceConstraint 18 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 12: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 19 ## InsertFragment 92 ## TwoFragment 40 ## CrossOver 0 ## CrossAndInsert 39 ## ReduceClash 86 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 3 ## JiggleSubtree 6 ## OptSubtree 1 ## ReduceConstraint 18 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 13: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 23 ## InsertFragment 98 ## TwoFragment 42 ## CrossOver 0 ## CrossAndInsert 43 ## ReduceClash 93 ## OneRotamer 0 ## ClashingRotamer 1 ## ReduceBreak 0 ## CloseGap 3 ## JiggleSubtree 6 ## OptSubtree 1 ## ReduceConstraint 19 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 14: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 23 ## InsertFragment 108 ## TwoFragment 43 ## CrossOver 0 ## CrossAndInsert 45 ## ReduceClash 100 ## OneRotamer 0 ## ClashingRotamer 2 ## ReduceBreak 0 ## CloseGap 4 ## JiggleSubtree 8 ## OptSubtree 1 ## ReduceConstraint 19 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 15: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 25 ## InsertFragment 118 ## TwoFragment 46 ## CrossOver 0 ## CrossAndInsert 48 ## ReduceClash 103 ## OneRotamer 0 ## ClashingRotamer 2 ## ReduceBreak 0 ## CloseGap 4 ## JiggleSubtree 10 ## OptSubtree 1 ## ReduceConstraint 20 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 16: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 25 ## InsertFragment 125 ## TwoFragment 48 ## CrossOver 0 ## CrossAndInsert 50 ## ReduceClash 113 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 4 ## JiggleSubtree 11 ## OptSubtree 1 ## ReduceConstraint 21 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 17: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 26 ## InsertFragment 133 ## TwoFragment 49 ## CrossOver 0 ## CrossAndInsert 52 ## ReduceClash 123 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 4 ## JiggleSubtree 12 ## OptSubtree 1 ## ReduceConstraint 22 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= -0.480817 0.799614 0.30422 0.192047 13.4217 -39.9482 -11.4552 # generation 18: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 26 ## InsertFragment 139 ## TwoFragment 50 ## CrossOver 0 ## CrossAndInsert 56 ## ReduceClash 131 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 6 ## JiggleSubtree 14 ## OptSubtree 2 ## ReduceConstraint 22 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 19: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 27 ## InsertFragment 143 ## TwoFragment 51 ## CrossOver 0 ## CrossAndInsert 58 ## ReduceClash 143 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 6 ## JiggleSubtree 16 ## OptSubtree 2 ## ReduceConstraint 24 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 20: best score out of 40: T0191.try5 73.3577 cost/residue, 237 clashes 0.346449 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 27 ## InsertFragment 150 ## TwoFragment 53 ## CrossOver 0 ## CrossAndInsert 62 ## ReduceClash 149 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 6 ## JiggleSubtree 21 ## OptSubtree 2 ## ReduceConstraint 24 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 21: best score out of 40: T0191.try5 73.2331 cost/residue, 236 clashes 0.345831 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 27 ## InsertFragment 154 ## TwoFragment 53 ## CrossOver 0 ## CrossAndInsert 66 ## ReduceClash 161 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 6 ## JiggleSubtree 25 ## OptSubtree 2 ## ReduceConstraint 24 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I9 jump= 0.411286 -0.472504 0.555275 -0.54704 -38.5274 16.5245 19.549 # generation 22: best score out of 40: T0191.try5 73.2312 cost/residue, 233 clashes 0.341782 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 27 ## InsertFragment 159 ## TwoFragment 54 ## CrossOver 0 ## CrossAndInsert 68 ## ReduceClash 174 ## OneRotamer 0 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 6 ## JiggleSubtree 26 ## OptSubtree 3 ## ReduceConstraint 25 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)L48 jump= -0.987021 -0.0365851 -0.146974 -0.0533902 -2.25372 1.69782 10.9202 # generation 23: best score out of 40: T0191.try5 73.1982 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 28 ## InsertFragment 170 ## TwoFragment 55 ## CrossOver 0 ## CrossAndInsert 68 ## ReduceClash 180 ## OneRotamer 1 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 6 ## JiggleSubtree 27 ## OptSubtree 5 ## ReduceConstraint 26 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 24: best score out of 40: T0191.try5 73.1982 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 28 ## InsertFragment 179 ## TwoFragment 55 ## CrossOver 0 ## CrossAndInsert 71 ## ReduceClash 184 ## OneRotamer 1 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 7 ## JiggleSubtree 32 ## OptSubtree 7 ## ReduceConstraint 26 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 25: best score out of 40: T0191.try5 73.1982 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 30 ## InsertFragment 183 ## TwoFragment 56 ## CrossOver 0 ## CrossAndInsert 75 ## ReduceClash 193 ## OneRotamer 1 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 8 ## JiggleSubtree 35 ## OptSubtree 7 ## ReduceConstraint 26 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 26: best score out of 40: T0191.try5 73.1982 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 30 ## InsertFragment 193 ## TwoFragment 56 ## CrossOver 0 ## CrossAndInsert 77 ## ReduceClash 200 ## OneRotamer 1 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 8 ## JiggleSubtree 37 ## OptSubtree 9 ## ReduceConstraint 27 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 27: best score out of 40: T0191.try5 73.1982 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 31 ## InsertFragment 196 ## TwoFragment 57 ## CrossOver 0 ## CrossAndInsert 80 ## ReduceClash 211 ## OneRotamer 1 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 8 ## JiggleSubtree 40 ## OptSubtree 11 ## ReduceConstraint 27 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 28: best score out of 40: T0191.try5 73.1813 cost/residue, 242 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 31 ## InsertFragment 201 ## TwoFragment 58 ## CrossOver 0 ## CrossAndInsert 84 ## ReduceClash 220 ## OneRotamer 2 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 8 ## JiggleSubtree 43 ## OptSubtree 12 ## ReduceConstraint 27 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 29: best score out of 40: T0191.try5 73.1813 cost/residue, 242 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 31 ## InsertFragment 204 ## TwoFragment 59 ## CrossOver 0 ## CrossAndInsert 87 ## ReduceClash 231 ## OneRotamer 2 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 8 ## JiggleSubtree 48 ## OptSubtree 13 ## ReduceConstraint 27 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 30: best score out of 40: T0191.try5 73.1813 cost/residue, 242 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 33 ## InsertFragment 211 ## TwoFragment 59 ## CrossOver 0 ## CrossAndInsert 87 ## ReduceClash 241 ## OneRotamer 2 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 8 ## JiggleSubtree 51 ## OptSubtree 14 ## ReduceConstraint 28 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 31: best score out of 40: T0191.try5 73.1089 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 34 ## InsertFragment 221 ## TwoFragment 60 ## CrossOver 0 ## CrossAndInsert 89 ## ReduceClash 247 ## OneRotamer 2 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 9 ## JiggleSubtree 53 ## OptSubtree 15 ## ReduceConstraint 28 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 32: best score out of 40: T0191.try5 73.1089 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 34 ## InsertFragment 226 ## TwoFragment 60 ## CrossOver 0 ## CrossAndInsert 91 ## ReduceClash 258 ## OneRotamer 2 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 9 ## JiggleSubtree 57 ## OptSubtree 16 ## ReduceConstraint 29 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 33: best score out of 40: T0191.try5 73.1089 cost/residue, 241 clashes 0.34155 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 35 ## InsertFragment 234 ## TwoFragment 61 ## CrossOver 0 ## CrossAndInsert 92 ## ReduceClash 261 ## OneRotamer 3 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 9 ## JiggleSubtree 62 ## OptSubtree 19 ## ReduceConstraint 30 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 34: best score out of 40: T0191.try5 73.103 cost/residue, 220 clashes 0.340508 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 36 ## InsertFragment 238 ## TwoFragment 62 ## CrossOver 0 ## CrossAndInsert 92 ## ReduceClash 266 ## OneRotamer 3 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 9 ## JiggleSubtree 73 ## OptSubtree 21 ## ReduceConstraint 30 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 35: best score out of 40: T0191.try5 73.103 cost/residue, 220 clashes 0.340508 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 36 ## InsertFragment 244 ## TwoFragment 62 ## CrossOver 0 ## CrossAndInsert 93 ## ReduceClash 269 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 10 ## JiggleSubtree 79 ## OptSubtree 26 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 36: best score out of 40: T0191.try5 73.103 cost/residue, 220 clashes 0.340508 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 36 ## InsertFragment 252 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 95 ## ReduceClash 273 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 11 ## JiggleSubtree 85 ## OptSubtree 28 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 37: best score out of 40: T0191.try5 73.103 cost/residue, 220 clashes 0.340508 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 36 ## InsertFragment 258 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 95 ## ReduceClash 278 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 12 ## JiggleSubtree 94 ## OptSubtree 31 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 47 # generation 38: best score out of 40: T0191.try5 73.103 cost/residue, 220 clashes 0.340508 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 36 ## InsertFragment 259 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 96 ## ReduceClash 281 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 14 ## JiggleSubtree 109 ## OptSubtree 33 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 39: best score out of 40: T0191.try5 73.0924 cost/residue, 241 clashes 0.342038 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 37 ## InsertFragment 261 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 96 ## ReduceClash 283 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 14 ## JiggleSubtree 124 ## OptSubtree 37 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 40: best score out of 40: T0191.try5 73.0868 cost/residue, 223 clashes 0.350058 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 37 ## InsertFragment 265 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 96 ## ReduceClash 286 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 15 ## JiggleSubtree 136 ## OptSubtree 41 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 41: best score out of 40: T0191.try5 72.8866 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 38 ## InsertFragment 266 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 96 ## ReduceClash 293 ## OneRotamer 4 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 15 ## JiggleSubtree 147 ## OptSubtree 45 ## ReduceConstraint 31 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 42: best score out of 40: T0191.try5 72.8866 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 39 ## InsertFragment 268 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 97 ## ReduceClash 300 ## OneRotamer 5 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 15 ## JiggleSubtree 153 ## OptSubtree 50 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)L48 jump= -0.64898 -0.741821 0.117582 0.121251 -2.2887 -5.27627 -5.97001 # Removing break before 47 # generation 43: best score out of 40: T0191.try5 72.8866 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 40 ## InsertFragment 269 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 98 ## ReduceClash 308 ## OneRotamer 5 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 16 ## JiggleSubtree 161 ## OptSubtree 54 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 44: best score out of 40: T0191.try5 72.8866 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 40 ## InsertFragment 272 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 98 ## ReduceClash 314 ## OneRotamer 5 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 16 ## JiggleSubtree 171 ## OptSubtree 59 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 45: best score out of 40: T0191.try5 72.8789 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 40 ## InsertFragment 275 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 98 ## ReduceClash 317 ## OneRotamer 6 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 16 ## JiggleSubtree 184 ## OptSubtree 63 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 46: best score out of 40: T0191.try5 72.8789 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 40 ## InsertFragment 278 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 98 ## ReduceClash 322 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 16 ## JiggleSubtree 197 ## OptSubtree 65 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 47: best score out of 40: T0191.try5 72.8789 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 40 ## InsertFragment 278 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 99 ## ReduceClash 323 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 18 ## JiggleSubtree 212 ## OptSubtree 70 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 48: best score out of 40: T0191.try5 72.8789 cost/residue, 237 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 40 ## InsertFragment 278 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 99 ## ReduceClash 323 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 18 ## JiggleSubtree 231 ## OptSubtree 75 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 49: best score out of 40: T0191.try5 72.7611 cost/residue, 239 clashes 0.307901 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 278 ## TwoFragment 63 ## CrossOver 0 ## CrossAndInsert 99 ## ReduceClash 323 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 18 ## JiggleSubtree 252 ## OptSubtree 77 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I95 jump= -0.536294 -0.329034 -0.593165 0.502275 44.7635 -32.5831 1.04231 # jumping subtree containing (T0191)H14 jump= -0.686667 -0.546878 0.42963 -0.211736 -23.9046 -37.1733 25.3328 # jumping subtree containing (T0191)E96 jump= 0.592642 -0.58 -0.531503 0.172858 42.9844 -39.4884 -33.399 # generation 50: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 278 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 99 ## ReduceClash 323 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 19 ## JiggleSubtree 271 ## OptSubtree 80 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 51: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 278 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 323 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 19 ## JiggleSubtree 286 ## OptSubtree 88 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.982509 -0.075094 -0.0373405 -0.166262 16.3851 -10.7416 -26.7104 # jumping subtree containing (T0191)I52 jump= 0.531048 0.541775 -0.626738 -0.177954 32.2822 22.3025 16.0343 # generation 52: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 325 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 19 ## JiggleSubtree 301 ## OptSubtree 93 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)L48 jump= 0.695688 -0.626666 0.14413 -0.32021 -12.5258 28.0125 57.7792 # jumping subtree containing (T0191)L48 jump= 0.616831 -0.00844867 -0.682093 0.39268 20.5305 -7.19054 -5.85112 # jumping subtree containing (T0191)Y38 jump= -0.055347 0.300886 -0.652799 0.693006 86.0918 78.2813 21.7041 # jumping subtree containing (T0191)N35 jump= 0.245832 0.768785 0.554606 -0.202359 -33.5118 38.0129 18.4257 # generation 53: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 325 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 19 ## JiggleSubtree 319 ## OptSubtree 99 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 54: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 325 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 20 ## JiggleSubtree 340 ## OptSubtree 101 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 47 # Removing break before 8 # generation 55: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329292 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 325 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 20 ## JiggleSubtree 359 ## OptSubtree 106 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 56: best score out of 40: T0191.try5 72.7099 cost/residue, 239 clashes 0.329292 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 325 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 20 ## JiggleSubtree 377 ## OptSubtree 112 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.99758 -0.0575356 -0.0126877 0.0369041 -20.4072 4.09365 0.240021 # generation 57: best score out of 40: T0191.try5 72.7098 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 100 ## ReduceClash 325 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 20 ## JiggleSubtree 396 ## OptSubtree 117 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)L48 jump= -0.737011 0.173568 0.296808 0.581888 5.63836 63.8087 -26.6391 # generation 58: best score out of 40: T0191.try5 72.6571 cost/residue, 239 clashes 0.329293 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 280 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 101 ## ReduceClash 326 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 412 ## OptSubtree 121 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 47 # generation 59: best score out of 40: T0191.try5 72.6235 cost/residue, 244 clashes 0.329292 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 41 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 326 ## OneRotamer 7 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 432 ## OptSubtree 123 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.708614 -0.518016 0.278005 -0.390178 4.56225 73.7033 24.3631 # generation 60: best score out of 40: T0191.try5 72.6161 cost/residue, 242 clashes 0.329292 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 42 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 326 ## OneRotamer 8 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 452 ## OptSubtree 128 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.615651 0.147804 0.751221 -0.186533 87.9632 -24.1761 -62.61 # generation 61: best score out of 40: T0191.try5 72.5886 cost/residue, 235 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 42 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 8 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 472 ## OptSubtree 137 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 62: best score out of 40: T0191.try5 72.5885 cost/residue, 235 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 42 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 8 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 494 ## OptSubtree 144 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 63: best score out of 40: T0191.try5 72.5885 cost/residue, 235 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 42 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 8 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 516 ## OptSubtree 147 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.999939 0.00784144 -5.2961e-05 0.00772091 -19.8445 9.60195 -8.06567 # jumping subtree containing (T0191)T92 jump= -0.154462 0.0041038 -0.0538925 -0.986519 7.46124 31.3779 12.2383 # Removing break before 8 # Removing break before 47 # Removing break before 8 # Removing break before 47 # generation 64: best score out of 40: T0191.try5 72.5632 cost/residue, 233 clashes 0.285199 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 42 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 9 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 540 ## OptSubtree 147 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.766537 0.370971 -0.220349 -0.475655 25.5967 41.5946 4.80058 # generation 65: best score out of 40: T0191.try5 72.5327 cost/residue, 233 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 42 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 10 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 22 ## JiggleSubtree 558 ## OptSubtree 152 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.657609 0.205747 -0.287536 -0.665238 44.4532 24.7802 4.31997 # generation 66: best score out of 40: T0191.try5 72.5327 cost/residue, 233 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 11 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 23 ## JiggleSubtree 576 ## OptSubtree 157 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.490902 -0.21572 0.0251699 -0.84371 58.6404 8.48686 -26.6593 # generation 67: best score out of 40: T0191.try5 72.4873 cost/residue, 230 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 13 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 23 ## JiggleSubtree 600 ## OptSubtree 161 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 68: best score out of 40: T0191.try5 72.4873 cost/residue, 230 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 14 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 23 ## JiggleSubtree 619 ## OptSubtree 168 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 69: best score out of 40: T0191.try5 72.4873 cost/residue, 230 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 14 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 23 ## JiggleSubtree 643 ## OptSubtree 176 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # generation 70: best score out of 40: T0191.try5 72.4873 cost/residue, 230 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 14 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 24 ## JiggleSubtree 665 ## OptSubtree 177 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 71: best score out of 40: T0191.try5 72.3807 cost/residue, 221 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 15 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 26 ## JiggleSubtree 680 ## OptSubtree 183 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= -0.564846 0.278898 -0.735518 0.249356 39.5072 20.2461 57.7954 # jumping subtree containing (T0191)T92 jump= 0.618325 0.317106 -0.308091 -0.649768 30.2784 95.2293 -18.9965 # jumping subtree containing (T0191)M1 jump= 0.119052 0.49037 0.863226 0.0143318 27.1627 -28.103 53.2825 # generation 72: best score out of 40: T0191.try5 72.3806 cost/residue, 221 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 16 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 26 ## JiggleSubtree 694 ## OptSubtree 192 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.0303248 -0.594369 0.121316 0.794411 43.8413 71.9877 11.9587 # Removing break before 8 # jumping subtree containing (T0191)N91 jump= -0.955285 -0.274086 -0.101224 -0.0453967 1.66512 4.06635 -3.0644 # jumping subtree containing (T0191)T92 jump= -0.917974 -0.153275 0.363321 0.0427556 6.82942 28.1156 -29.0409 # generation 73: best score out of 40: T0191.try5 72.3806 cost/residue, 221 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 17 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 27 ## JiggleSubtree 718 ## OptSubtree 196 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 74: best score out of 40: T0191.try5 72.2548 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 18 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 28 ## JiggleSubtree 735 ## OptSubtree 203 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.647039 0.734135 -0.14245 -0.148642 3.45377 92.3809 15.1861 # jumping subtree containing (T0191)G88 jump= 0.00579115 0.37801 0.775649 -0.505414 60.0386 22.8738 123.392 # jumping subtree containing (T0191)N35 jump= 0.541575 0.324241 0.457752 0.626121 8.54618 16.7144 -5.8014 # generation 75: best score out of 40: T0191.try5 72.2548 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 18 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 28 ## JiggleSubtree 752 ## OptSubtree 211 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.986397 0.16242 0.0181554 0.0176659 -18.7121 -20.9354 28.0562 # generation 76: best score out of 40: T0191.try5 72.2548 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 18 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 29 ## JiggleSubtree 776 ## OptSubtree 216 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 77: best score out of 40: T0191.try5 72.2547 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 18 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 30 ## JiggleSubtree 792 ## OptSubtree 223 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 78: best score out of 40: T0191.try5 72.2547 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 18 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 30 ## JiggleSubtree 813 ## OptSubtree 226 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= 0.819928 0.286924 -0.257334 0.423287 46.8694 7.77171 -38.3289 # generation 79: best score out of 40: T0191.try5 72.2547 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 18 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 31 ## JiggleSubtree 829 ## OptSubtree 233 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 80: best score out of 40: T0191.try5 72.2547 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 19 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 31 ## JiggleSubtree 850 ## OptSubtree 235 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y38 jump= 0.679755 0.1371 -0.54109 -0.475772 10.5979 11.9937 -47.2485 # generation 81: best score out of 40: T0191.try5 72.2546 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 19 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 33 ## JiggleSubtree 869 ## OptSubtree 238 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.116441 0.54784 0.152713 0.814243 92.5188 135.847 -64.8184 # generation 82: best score out of 40: T0191.try5 72.2546 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 20 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 34 ## JiggleSubtree 882 ## OptSubtree 247 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 83: best score out of 40: T0191.try5 72.2546 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 20 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 36 ## JiggleSubtree 901 ## OptSubtree 250 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)V16 jump= -0.706094 0.177408 -0.13677 0.671752 -53.6359 62.2564 27.4971 # generation 84: best score out of 40: T0191.try5 72.2546 cost/residue, 226 clashes 0.285198 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 327 ## OneRotamer 20 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 37 ## JiggleSubtree 919 ## OptSubtree 255 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # generation 85: best score out of 40: T0191.try5 72.2528 cost/residue, 227 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 22 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 40 ## JiggleSubtree 936 ## OptSubtree 256 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 86: best score out of 40: T0191.try5 72.2528 cost/residue, 227 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 22 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 42 ## JiggleSubtree 951 ## OptSubtree 263 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I9 jump= 0.150554 0.754583 -0.399794 0.498099 98.3537 157.155 -71.717 # jumping subtree containing (T0191)K99 jump= -0.801862 0.521138 -0.0898815 -0.278125 25.5234 100.436 43.4329 # generation 87: best score out of 40: T0191.try5 72.2528 cost/residue, 227 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 22 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 43 ## JiggleSubtree 976 ## OptSubtree 269 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y38 jump= -0.952843 0.0954928 -0.222507 0.182927 8.97048 39.6915 37.987 # jumping subtree containing (T0191)N35 jump= 0.44293 0.782561 0.404595 -0.166473 -56.0594 66.2154 -144.765 # generation 88: best score out of 40: T0191.try5 72.2528 cost/residue, 227 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 22 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 44 ## JiggleSubtree 992 ## OptSubtree 276 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I9 jump= 0.221347 -0.532687 -0.671233 0.465506 -105.57 71.8938 5.8641 # Removing break before 8 # jumping subtree containing (T0191)K99 jump= 0.828297 -0.34295 -0.268389 -0.352528 -69.3137 88.3862 28.2268 # generation 89: best score out of 40: T0191.try5 72.2527 cost/residue, 227 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 22 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 45 ## JiggleSubtree 1013 ## OptSubtree 278 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I73 jump= 0.855981 0.0905053 0.0640801 -0.504974 -72.6516 79.3908 -30.1903 # generation 90: best score out of 40: T0191.try5 72.2366 cost/residue, 228 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 23 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 45 ## JiggleSubtree 1031 ## OptSubtree 283 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.999569 -0.0194223 -0.0125029 -0.0180942 19.7474 1.1004 13.0521 # jumping subtree containing (T0191)G88 jump= 0.801053 -0.121679 0.584185 0.047293 78.8356 6.22777 -32.2278 # Removing break before 8 # jumping subtree containing (T0191)I71 jump= -0.716909 -0.0819512 0.637592 -0.269817 2.14821 -19.9486 -34.8128 # generation 91: best score out of 40: T0191.try5 72.2366 cost/residue, 228 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 23 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 47 ## JiggleSubtree 1051 ## OptSubtree 285 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I73 jump= -0.0148227 -0.772086 -0.615676 -0.156868 -84.9571 133.599 -54.6889 # jumping subtree containing (T0191)I73 jump= 0.440014 -0.804753 -0.398308 0.0105424 -83.8188 147.941 3.19275 # generation 92: best score out of 40: T0191.try5 72.2366 cost/residue, 228 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 23 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 47 ## JiggleSubtree 1077 ## OptSubtree 289 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.910517 -0.10957 0.380886 -0.117808 1.6406 5.81557 -39.1251 # jumping subtree containing (T0191)K99 jump= -0.722628 0.570229 0.235985 -0.311383 -30.9098 131.226 86.7765 # generation 93: best score out of 40: T0191.try5 72.2366 cost/residue, 228 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 23 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 48 ## JiggleSubtree 1092 ## OptSubtree 297 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.902586 -0.0867241 -0.0225854 -0.421079 -67.5491 44.6266 -7.18929 # jumping subtree containing (T0191)T92 jump= 0.215454 0.746571 0.618531 0.116753 -64.0888 106.248 -102.361 # generation 94: best score out of 40: T0191.try5 72.2092 cost/residue, 224 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 24 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 49 ## JiggleSubtree 1108 ## OptSubtree 303 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K49 jump= -0.392994 0.76998 -0.479019 0.152405 100.561 180.218 -28.8174 # jumping subtree containing (T0191)M1 jump= -0.192685 0.0625619 0.900217 0.385446 -2.74851 66.8527 -152.154 # jumping subtree containing (T0191)N35 jump= 0.76827 0.614904 -0.0826257 0.157566 49.3213 52.9934 -124.034 # jumping subtree containing (T0191)I9 jump= -0.275982 -0.148465 0.911812 -0.265313 40.3494 24.8201 -38.9538 # generation 95: best score out of 40: T0191.try5 72.132 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 25 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1123 ## OptSubtree 310 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.643972 -0.260799 -0.47937 -0.536179 -38.9622 104.057 -79.6711 # jumping subtree containing (T0191)I73 jump= 0.603512 0.0121618 -0.498096 -0.622516 -87.9319 104.406 -93.5978 # jumping subtree containing (T0191)K99 jump= -0.901635 0.335922 -0.272411 -0.00135411 53.7624 59.7326 65.6464 # jumping subtree containing (T0191)N35 jump= -0.971784 0.119339 -0.119584 -0.164601 51.1058 23.8796 12.9697 # generation 96: best score out of 40: T0191.try5 72.132 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 25 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1147 ## OptSubtree 317 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 97: best score out of 40: T0191.try5 72.1319 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 25 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1178 ## OptSubtree 320 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)G88 jump= -0.982411 -0.0178013 0.0480338 0.179567 -44.9863 -1.493 -22.0768 # jumping subtree containing (T0191)I52 jump= 0.983014 0.153876 -0.0157572 -0.0987756 -45.7165 2.93515 -46.4896 # generation 98: best score out of 40: T0191.try5 72.1319 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 43 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 25 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1199 ## OptSubtree 324 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.703636 -0.0560815 -0.39542 -0.587702 -123.178 122.419 -39.455 # jumping subtree containing (T0191)K49 jump= -0.382238 -0.626272 -0.114568 -0.66974 126.445 166.226 -131.515 # Removing break before 98 # jumping subtree containing (T0191)I71 jump= -0.118771 -0.655851 0.333533 -0.666715 135.838 122.384 -53.8876 # generation 99: best score out of 40: T0191.try5 72.1319 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 25 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1217 ## OptSubtree 329 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= -0.962684 0.0234131 -0.0491646 -0.265093 81.5278 -5.47232 -6.33749 # jumping subtree containing (T0191)K49 jump= -0.967409 -0.1612 -0.163455 0.106851 -1.72802 5.65833 -41.3761 # generation 100: best score out of 40: T0191.try5 72.1319 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 25 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1233 ## OptSubtree 337 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)T92 jump= -0.153436 -0.318402 -0.935376 0.0122427 -82.9545 10.4895 -69.4387 # jumping subtree containing (T0191)E17 jump= -0.190373 0.294889 -0.374703 0.858135 -13.2381 180.763 108.923 # jumping subtree containing (T0191)K99 jump= 0.588646 -0.714749 -0.335277 0.173834 -76.2933 171.547 38.6849 # jumping subtree containing (T0191)K99 jump= -0.519474 0.37386 -0.762473 -0.0949232 129.512 52.1104 -25.9609 # generation 101: best score out of 40: T0191.try5 72.0931 cost/residue, 226 clashes 0.284633 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 26 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 50 ## JiggleSubtree 1249 ## OptSubtree 344 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.957257 0.0817026 0.228244 0.157762 -38.122 -17.21 19.0759 # jumping subtree containing (T0191)I73 jump= -0.430617 0.703664 -0.418584 -0.379755 75.644 175.809 -46.82 # Removing break before 8 # jumping subtree containing (T0191)K99 jump= 0.412564 0.0901042 0.664842 -0.616163 -93.5056 109.664 83.7404 # generation 102: best score out of 40: T0191.try5 72.0931 cost/residue, 226 clashes 0.284633 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 26 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 51 ## JiggleSubtree 1267 ## OptSubtree 349 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K56 jump= -0.00667899 0.160039 0.482784 0.860966 -16.1122 201.384 -94.1448 # jumping subtree containing (T0191)K99 jump= 0.167485 -0.604371 0.365142 -0.688009 56.7407 250.535 86.4437 # generation 103: best score out of 40: T0191.try5 72.0931 cost/residue, 226 clashes 0.284633 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 26 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 51 ## JiggleSubtree 1288 ## OptSubtree 361 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I87 jump= 0.237489 -0.41668 0.0273084 -0.877058 -48.565 247.076 9.10044 # generation 104: best score out of 40: T0191.try5 72.093 cost/residue, 226 clashes 0.284633 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 26 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 51 ## JiggleSubtree 1311 ## OptSubtree 366 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)T92 jump= -0.926261 0.311886 0.152552 0.146613 -66.0256 57.5678 84.5831 # generation 105: best score out of 40: T0191.try5 72.0929 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 328 ## OneRotamer 27 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 52 ## JiggleSubtree 1327 ## OptSubtree 372 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= 0.559638 -0.326901 0.761033 -0.0277598 97.5479 34.6391 -25.7809 # generation 106: best score out of 40: T0191.try5 72.0657 cost/residue, 226 clashes 0.284634 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 44 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 28 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1342 ## OptSubtree 378 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.826039 0.523955 0.168433 -0.121495 -43.5214 60.9433 -173.375 # generation 107: best score out of 40: T0191.try5 72.0656 cost/residue, 226 clashes 0.284633 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 28 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1358 ## OptSubtree 385 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= -0.997656 -0.0490472 -0.0407382 0.0248603 5.24021 -24.318 -3.9214 # generation 108: best score out of 40: T0191.try5 71.9775 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 29 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1383 ## OptSubtree 393 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 109: best score out of 40: T0191.try5 71.9775 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 30 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1402 ## OptSubtree 400 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 110: best score out of 40: T0191.try5 71.9772 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 30 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1431 ## OptSubtree 405 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= -0.202502 0.791215 -0.525636 -0.238071 51.5639 135.039 -74.4162 # jumping subtree containing (T0191)T92 jump= -0.827779 0.168738 0.077961 -0.529369 82.2195 102.534 39.5525 # jumping subtree containing (T0191)Y36 jump= 0.726189 0.493911 -0.18493 0.441025 80.0296 100.141 -77.5452 # jumping subtree containing (T0191)N91 jump= 0.20072 0.378805 -0.8046 0.410899 56.95 69.3164 20.0706 # jumping subtree containing (T0191)K49 jump= 0.172203 0.793071 -0.18895 -0.552886 -23.8853 195.905 -124.467 # jumping subtree containing (T0191)K49 jump= -0.514911 -0.0540892 -0.488658 0.702249 -118.597 80.9053 31.1662 # generation 111: best score out of 40: T0191.try5 71.9762 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 31 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1449 ## OptSubtree 412 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.803244 -0.278495 0.382662 0.361676 85.5181 95.2754 -31.793 # jumping subtree containing (T0191)Q85 jump= 0.293591 -0.749323 -0.251224 -0.537778 -78.6871 268.828 -9.05269 # generation 112: best score out of 40: T0191.try5 71.9762 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 31 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1464 ## OptSubtree 421 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 113: best score out of 40: T0191.try5 71.912 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 32 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1488 ## OptSubtree 429 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.834381 -0.161879 0.426261 -0.309685 61.3133 18.4916 28.5242 # jumping subtree containing (T0191)K49 jump= -0.7683 -0.608106 0.170007 -0.104976 41.8142 34.6712 -140.642 # jumping subtree containing (T0191)K99 jump= 0.425515 -0.551897 0.438508 -0.567501 -2.16185 139.342 121.909 # generation 114: best score out of 40: T0191.try5 71.912 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 32 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1505 ## OptSubtree 436 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I73 jump= -0.495985 0.193899 -0.383959 -0.754306 60.4656 231.212 -108.167 # jumping subtree containing (T0191)T92 jump= -0.897474 0.263849 0.0745077 0.345503 -99.872 43.4429 60.3268 # jumping subtree containing (T0191)I73 jump= 0.795311 0.271893 -0.228667 0.491188 50.1642 82.8523 -16.4765 # generation 115: best score out of 40: T0191.try5 71.8006 cost/residue, 212 clashes 0.287948 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 53 ## JiggleSubtree 1528 ## OptSubtree 446 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.459083 0.796004 -0.381772 0.0993522 53.2393 123.493 11.2708 # generation 116: best score out of 40: T0191.try5 71.8005 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 54 ## JiggleSubtree 1548 ## OptSubtree 454 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.972098 -0.140352 -0.184386 -0.0364529 -46.3531 9.49812 57.9479 # generation 117: best score out of 40: T0191.try5 71.8004 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 54 ## JiggleSubtree 1577 ## OptSubtree 459 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 118: best score out of 40: T0191.try5 71.8002 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 54 ## JiggleSubtree 1594 ## OptSubtree 468 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.182444 0.945348 -0.205583 0.175404 75.0531 154.901 -121.681 # Removing break before 98 # jumping subtree containing (T0191)T92 jump= -0.967515 -0.0756055 -0.127388 0.204866 -38.1175 -8.68275 -9.62978 # generation 119: best score out of 40: T0191.try5 71.8002 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 56 ## JiggleSubtree 1612 ## OptSubtree 472 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)N35 jump= 0.115703 0.40684 0.901954 -0.0870227 -137.219 83.7809 -76.0202 # jumping subtree containing (T0191)I73 jump= 0.989635 -0.0158957 0.0810019 -0.117512 -7.49237 -14.0198 0.912998 # jumping subtree containing (T0191)N35 jump= -0.00605077 -0.589102 -0.069814 -0.805015 -6.53133 227.763 -10.2658 # generation 120: best score out of 40: T0191.try5 71.8002 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 57 ## JiggleSubtree 1631 ## OptSubtree 476 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y76 jump= 0.309112 0.819608 0.0773309 -0.476143 -119.441 194.18 -174.259 # jumping subtree containing (T0191)I9 jump= -0.980995 0.0729879 0.152421 -0.0953426 -1.62724 0.53993 38.2074 # jumping subtree containing (T0191)I73 jump= 0.213687 0.0722153 0.819637 0.526611 -86.6301 147.186 -215.349 # jumping subtree containing (T0191)Y76 jump= 0.195363 0.321601 -0.693099 0.614833 39.6021 96.3125 63.7536 # jumping subtree containing (T0191)Y38 jump= -0.53216 -0.198709 0.502046 0.652127 -187.164 75.0404 -117.86 # generation 121: best score out of 40: T0191.try5 71.8002 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 58 ## JiggleSubtree 1650 ## OptSubtree 480 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)E96 jump= 0.770057 0.492555 0.169241 0.368456 66.5116 108.602 -152.746 # jumping subtree containing (T0191)T92 jump= -0.683148 0.409993 0.502893 -0.335132 -81.3461 101.734 96.8746 # jumping subtree containing (T0191)Y103 jump= -0.801652 -0.514761 -0.303317 0.0193771 -47.5081 55.35 -137.255 # generation 122: best score out of 40: T0191.try5 71.8002 cost/residue, 212 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 34 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 58 ## JiggleSubtree 1668 ## OptSubtree 486 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K49 jump= -0.831442 0.119309 -0.0574995 -0.539596 116.062 164.112 -1.1131 # jumping subtree containing (T0191)N35 jump= -0.948926 0.140424 0.174575 -0.222135 23.6435 39.2459 69.3318 # jumping subtree containing (T0191)V16 jump= -0.878282 -0.395186 0.019779 -0.268436 70.8482 80.9404 -100.382 # generation 123: best score out of 40: T0191.try5 71.7318 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 36 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 58 ## JiggleSubtree 1682 ## OptSubtree 494 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)G98 jump= -0.205836 0.909667 -0.31759 0.171096 73.4447 198.82 -17.5213 # generation 124: best score out of 40: T0191.try5 71.7318 cost/residue, 213 clashes 0.287947 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 36 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 58 ## JiggleSubtree 1697 ## OptSubtree 503 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I71 jump= -0.832859 0.00524242 -0.133644 0.537082 -124.92 52.7434 5.24466 # generation 125: best score out of 40: T0191.try5 71.7316 cost/residue, 213 clashes 0.287946 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 36 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 59 ## JiggleSubtree 1727 ## OptSubtree 506 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.820403 0.488826 -0.143526 0.259592 -10.88 67.2299 58.8605 # generation 126: best score out of 40: T0191.try5 71.7307 cost/residue, 213 clashes 0.287948 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 329 ## OneRotamer 37 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 60 ## JiggleSubtree 1745 ## OptSubtree 510 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I67 jump= 0.808423 0.405826 0.378667 0.195878 5.16399 35.1066 -109.335 # generation 127: best score out of 40: T0191.try5 71.6601 cost/residue, 212 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 37 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 60 ## JiggleSubtree 1766 ## OptSubtree 512 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.953731 -0.082442 -0.14184 -0.251958 58.044 23.9434 -21.3858 # generation 128: best score out of 40: T0191.try5 71.6601 cost/residue, 212 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 37 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 60 ## JiggleSubtree 1793 ## OptSubtree 520 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= 0.110398 0.676628 0.139647 0.714483 44.0772 233.251 -59.595 # jumping subtree containing (T0191)T92 jump= -0.684074 -0.052501 -0.652469 -0.321823 28.8993 73.6891 -107.691 # jumping subtree containing (T0191)N35 jump= -0.0668595 0.897174 0.268162 0.344525 -26.1979 226.854 -56.4515 # jumping subtree containing (T0191)Y38 jump= 0.773251 0.341991 0.454648 -0.280034 -129.574 63.9968 -64.6829 # generation 129: best score out of 40: T0191.try5 71.6601 cost/residue, 212 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 281 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 37 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 60 ## JiggleSubtree 1814 ## OptSubtree 531 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)Y50 jump= -0.937655 0.0297084 0.258673 -0.230234 40.124 27.305 16.3276 # generation 130: best score out of 40: T0191.try5 71.6518 cost/residue, 210 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 37 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 60 ## JiggleSubtree 1827 ## OptSubtree 541 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.658591 -0.744279 -0.0915178 -0.0626966 -21.9742 160.955 98.8853 # generation 131: best score out of 40: T0191.try5 71.6515 cost/residue, 210 clashes 0.278333 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 37 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 60 ## JiggleSubtree 1847 ## OptSubtree 545 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= 0.902572 -0.261734 0.104278 0.325553 110.429 66.7452 52.8679 # jumping subtree containing (T0191)I71 jump= -0.780876 0.154545 -0.600594 0.0750676 33.0045 3.41939 47.2293 # jumping subtree containing (T0191)K99 jump= -0.926716 0.024237 0.0222931 -0.374318 101.749 46.2659 -4.39644 # generation 132: best score out of 40: T0191.try5 71.6503 cost/residue, 208 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 38 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 62 ## JiggleSubtree 1869 ## OptSubtree 554 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K49 jump= 0.744124 0.0456802 -0.216718 0.630258 128.228 127.112 40.5898 # jumping subtree containing (T0191)K99 jump= 0.83374 0.0849596 0.349476 0.418959 122.408 23.8433 -54.9837 # generation 133: best score out of 40: T0191.try5 71.6497 cost/residue, 208 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 38 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 62 ## JiggleSubtree 1885 ## OptSubtree 563 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 134: best score out of 40: T0191.try5 71.6026 cost/residue, 205 clashes 0.278333 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 39 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 63 ## JiggleSubtree 1907 ## OptSubtree 571 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I108 jump= 0.989342 0.0607237 0.0212004 0.130632 54.0228 -9.45658 -31.7617 # jumping subtree containing (T0191)K82 jump= -0.450375 -0.445735 -0.603688 -0.483781 35.4565 153.248 -187.45 # jumping subtree containing (T0191)K99 jump= -0.999828 0.00303208 0.0103139 0.0150922 -2.83386 13.4179 -18.5306 # jumping subtree containing (T0191)T92 jump= -0.0977242 -0.984033 0.0438626 0.142143 26.4505 256.989 -64.1211 # jumping subtree containing (T0191)K82 jump= 0.316578 -0.115257 -0.537842 -0.7728 -109.537 177.596 -111.012 # jumping subtree containing (T0191)V90 jump= 0.554947 0.0719986 -0.224528 -0.797771 -121.063 200.337 -81.0145 # generation 135: best score out of 40: T0191.try5 71.6025 cost/residue, 205 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 39 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 63 ## JiggleSubtree 1930 ## OptSubtree 575 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= -0.984547 -0.128189 -0.0859974 0.0827047 -37.0799 -24.0946 -50.5856 # Removing break before 98 # generation 136: best score out of 40: T0191.try5 71.6023 cost/residue, 205 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 39 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 63 ## JiggleSubtree 1955 ## OptSubtree 585 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.0393761 -0.886354 -0.0635209 -0.456937 -5.55513 312.1 -43.5781 # jumping subtree containing (T0191)T66 jump= 0.665332 0.498086 0.152934 0.534654 110.009 151.736 -152.311 # jumping subtree containing (T0191)V51 jump= 0.368931 -0.373765 0.111012 0.843722 120.704 295.053 -10.4808 # generation 137: best score out of 40: T0191.try5 71.6021 cost/residue, 205 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 39 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 66 ## JiggleSubtree 1974 ## OptSubtree 587 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)M74 jump= -0.981047 -0.0166392 0.142996 0.129696 -33.2235 4.80225 -18.1292 # jumping subtree containing (T0191)K99 jump= 0.716346 -0.434388 -0.542634 -0.0608638 -93.5857 47.7068 49.2866 # jumping subtree containing (T0191)Y50 jump= 0.710313 -0.468729 -0.203679 -0.484007 -167.807 185.935 58.907 # Removing break before 8 # generation 138: best score out of 40: T0191.try5 71.5416 cost/residue, 205 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 39 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 66 ## JiggleSubtree 1993 ## OptSubtree 592 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.427809 -0.204568 0.768835 0.428979 -75.8091 80.3246 -158.17 # jumping subtree containing (T0191)N35 jump= -0.457238 0.0953421 0.882951 -0.0473349 -28.4898 10.4841 -41.4484 # generation 139: best score out of 40: T0191.try5 71.5412 cost/residue, 205 clashes 0.278331 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 39 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2019 ## OptSubtree 599 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I73 jump= -0.495551 -0.279692 -0.82221 -0.0131021 -73.2554 41.0031 -118.632 # jumping subtree containing (T0191)I71 jump= -0.272673 0.208431 -0.199362 -0.917857 92.6923 359.671 -42.1924 # jumping subtree containing (T0191)T92 jump= 0.787047 -0.402585 0.0626247 0.463207 146.407 176.888 94.9277 # jumping subtree containing (T0191)I52 jump= 0.219129 0.0921755 -0.963337 0.124366 7.67311 -15.1992 -51.2643 # generation 140: best score out of 40: T0191.try5 71.522 cost/residue, 204 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 40 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2043 ## OptSubtree 604 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 98 # jumping subtree containing (T0191)N35 jump= 0.0672156 0.308206 0.0143088 0.948834 21.8644 335.136 -15.3146 # generation 141: best score out of 40: T0191.try5 71.5219 cost/residue, 204 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 40 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2061 ## OptSubtree 610 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.116712 0.235047 -0.462572 0.846852 32.3125 230.91 107.974 # jumping subtree containing (T0191)T66 jump= 0.22878 -0.810868 0.504919 -0.187644 171.523 324.401 50.3325 # jumping subtree containing (T0191)M1 jump= -0.977608 0.196836 0.0660351 0.0343165 -6.78194 55.1237 55.3473 # generation 142: best score out of 40: T0191.try5 71.5216 cost/residue, 204 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 40 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2085 ## OptSubtree 617 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K70 jump= 0.217706 0.0553664 0.500365 0.836166 123.753 268.594 -168.357 # jumping subtree containing (T0191)N35 jump= 0.410827 0.805776 0.416188 0.0934549 -75.6775 206.127 -187.788 # jumping subtree containing (T0191)I73 jump= 0.121877 0.968626 -0.203366 0.0745122 56.9537 318.101 -119.095 # generation 143: best score out of 40: T0191.try5 71.4001 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 282 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2103 ## OptSubtree 630 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y50 jump= 0.479284 0.0492399 -0.562596 -0.671824 -114.03 160.481 -148.802 # jumping subtree containing (T0191)K82 jump= -0.96998 0.0742358 0.0645526 0.222398 -75.6314 0.13616 37.0824 # jumping subtree containing (T0191)K99 jump= 0.138285 -0.174144 0.139808 0.964886 33.9455 321.565 -70.7007 # generation 144: best score out of 40: T0191.try5 71.3822 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2119 ## OptSubtree 637 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.230255 0.0577774 -0.41104 -0.880165 9.52898 272.11 -106.617 # jumping subtree containing (T0191)L48 jump= 0.0652133 0.454961 -0.142905 0.876548 23.5791 259.623 40.881 # jumping subtree containing (T0191)I71 jump= 0.367982 0.846503 0.300401 -0.240378 -126.735 183.126 -172.39 # generation 145: best score out of 40: T0191.try5 71.3821 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2142 ## OptSubtree 650 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y38 jump= 0.870883 0.0938121 0.349575 -0.332503 -96.5235 20.461 6.82634 # jumping subtree containing (T0191)N35 jump= -0.152049 0.103122 -0.779074 -0.599408 61.0165 125.782 -167.799 # generation 146: best score out of 40: T0191.try5 71.3819 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2169 ## OptSubtree 655 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.325617 0.485932 0.78959 -0.185449 -124.837 89.3131 59.6401 # Removing break before 8 # jumping subtree containing (T0191)Q85 jump= -0.428166 0.262317 0.849386 -0.162503 -94.9939 16.7227 32.4576 # jumping subtree containing (T0191)Y50 jump= 0.629575 0.396614 0.529977 -0.406764 -120.383 45.9225 -46.145 # jumping subtree containing (T0191)N35 jump= 0.99909 0.0303391 -0.018718 -0.0234243 12.5478 -19.2867 -11.5129 # generation 147: best score out of 40: T0191.try5 71.3819 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2188 ## OptSubtree 660 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 98 # jumping subtree containing (T0191)Y50 jump= -0.53685 -0.19991 0.385658 0.723254 -104.415 190.667 -138.825 # generation 148: best score out of 40: T0191.try5 71.3818 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2205 ## OptSubtree 667 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K99 jump= -0.323574 0.156543 -0.84467 -0.396644 79.0305 61.3812 -120.888 # jumping subtree containing (T0191)G88 jump= 0.620032 0.183697 -0.341441 0.682081 162.787 111.374 6.27147 # generation 149: best score out of 40: T0191.try5 71.3818 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 41 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2223 ## OptSubtree 673 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # generation 150: best score out of 40: T0191.try5 71.3818 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 42 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2242 ## OptSubtree 677 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K49 jump= 0.799432 -0.385382 0.270676 -0.372993 -44.3174 101.185 156.049 # jumping subtree containing (T0191)N35 jump= 0.210236 0.22655 -0.93611 -0.167854 46.03 21.5489 -112.96 # generation 151: best score out of 40: T0191.try5 71.3818 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 42 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2261 ## OptSubtree 682 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)V16 jump= -0.310477 -0.0940431 -0.860169 0.393534 -18.2663 19.2377 31.7231 # generation 152: best score out of 40: T0191.try5 71.3818 cost/residue, 199 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 42 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2279 ## OptSubtree 688 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 98 # jumping subtree containing (T0191)Q85 jump= -0.768138 -0.149049 -0.464318 -0.414918 83.4346 64.9923 -125.664 # jumping subtree containing (T0191)G88 jump= 0.95013 -0.260754 -0.138754 -0.100038 -62.6623 15.4831 74.1247 # jumping subtree containing (T0191)Q85 jump= 0.805154 0.51718 -0.252717 0.142779 77.3954 55.7289 -191.492 # jumping subtree containing (T0191)I73 jump= 0.597544 -0.178723 -0.769154 0.139287 -37.9692 18.6567 1.15063 # jumping subtree containing (T0191)T92 jump= -0.973374 0.226454 -0.00520812 -0.0351265 22.0059 21.3669 56.5591 # generation 153: best score out of 40: T0191.try5 71.3578 cost/residue, 197 clashes 0.278333 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 44 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2296 ## OptSubtree 693 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.85913 -0.493144 -0.0330745 -0.132708 40.1704 101.322 -168.069 # jumping subtree containing (T0191)K49 jump= 0.99524 0.0155138 -0.0801362 0.053252 -3.08614 -20.0961 6.05774 # generation 154: best score out of 40: T0191.try5 71.3577 cost/residue, 197 clashes 0.278333 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 45 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2314 ## OptSubtree 698 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)G88 jump= -0.4628 -0.864265 0.136302 -0.142422 73.8826 227.904 -190.281 # jumping subtree containing (T0191)Y38 jump= -0.748442 -0.352438 -0.0348564 0.56072 -177.639 114.248 -81.6134 # jumping subtree containing (T0191)T92 jump= -0.211958 -0.369186 0.8528 0.302502 0.39271 67.3487 -164.392 # jumping subtree containing (T0191)Y38 jump= -0.83164 -0.0989811 0.118001 0.533529 -185.259 85.9007 -45.7414 # generation 155: best score out of 40: T0191.try5 71.3577 cost/residue, 197 clashes 0.278333 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 46 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2337 ## OptSubtree 708 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)D42 jump= 0.354142 -0.581946 -0.339682 -0.648489 -106.767 322.328 -44.2749 # generation 156: best score out of 40: T0191.try5 71.3572 cost/residue, 197 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 46 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2353 ## OptSubtree 716 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I73 jump= -0.736763 0.662484 -0.0931469 -0.0980727 34.3056 183.416 131.465 # generation 157: best score out of 40: T0191.try5 71.2945 cost/residue, 189 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 47 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2369 ## OptSubtree 723 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.222954 0.099891 0.969557 0.016503 -81.3773 8.77958 -82.9092 # jumping subtree containing (T0191)N35 jump= 0.722597 -0.180738 0.314914 -0.588232 -60.1202 115.874 70.3679 # jumping subtree containing (T0191)T92 jump= 0.717332 0.0918939 0.512467 -0.462998 -93.0923 15.3775 31.0766 # generation 158: best score out of 40: T0191.try5 71.2944 cost/residue, 189 clashes 0.278332 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 283 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 49 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2392 ## OptSubtree 728 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K32 jump= 0.971551 0.102264 0.0890877 0.194151 78.3141 24.2648 -19.2254 # jumping subtree containing (T0191)I73 jump= 0.397281 0.825653 0.28215 0.284353 -19.3909 253.525 -221.462 # generation 159: best score out of 40: T0191.try5 71.2826 cost/residue, 190 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 49 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2417 ## OptSubtree 737 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)V16 jump= 0.726821 0.162393 0.633565 -0.209655 -34.1267 -5.69161 -57.2723 # generation 160: best score out of 40: T0191.try5 71.2826 cost/residue, 190 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 49 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2439 ## OptSubtree 740 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)G107 jump= -0.950022 0.131908 0.244471 0.142453 -48.1855 25.4797 14.7256 # jumping subtree containing (T0191)G88 jump= -0.809012 0.0494808 -0.58521 0.0241007 56.7934 9.96772 -22.9143 # jumping subtree containing (T0191)N35 jump= -0.394966 0.896119 -0.177048 0.0981201 67.4142 263.757 86.3627 # generation 161: best score out of 40: T0191.try5 71.2824 cost/residue, 190 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 49 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2464 ## OptSubtree 750 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)V65 jump= -0.996189 0.00705035 -0.0790423 -0.0361971 11.4992 -16.059 7.1102 # jumping subtree containing (T0191)Q85 jump= 0.37384 0.0480698 -0.901465 -0.212824 -96.7744 16.6875 -143.64 # jumping subtree containing (T0191)N35 jump= -0.991276 0.104633 0.0280383 -0.0750814 0.042614 21.2736 44.8775 # jumping subtree containing (T0191)G107 jump= -0.995314 0.0149849 0.0720283 0.0627409 -35.0557 -14.1561 14.7189 # generation 162: best score out of 40: T0191.try5 71.2824 cost/residue, 190 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 49 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2480 ## OptSubtree 758 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= 0.413851 0.219844 0.809691 -0.353265 -72.5647 10.2691 -2.14119 # jumping subtree containing (T0191)V65 jump= -0.152349 -0.786306 -0.176547 0.57214 -83.5927 304.902 -64.2183 # jumping subtree containing (T0191)V16 jump= -0.825897 -0.0528413 -0.242307 -0.506348 134.928 97.894 -70.5921 # generation 163: best score out of 40: T0191.try5 71.2824 cost/residue, 190 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 49 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2500 ## OptSubtree 762 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= 0.999592 -0.0105616 -0.00845074 0.0251739 34.3393 6.82041 -0.81018 # generation 164: best score out of 40: T0191.try5 71.2596 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 102 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2519 ## OptSubtree 766 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= 0.448635 0.0920435 0.293281 0.839191 113.908 294.014 -125.085 # jumping subtree containing (T0191)N35 jump= 0.824956 0.321858 -0.203749 -0.417542 -92.8647 70.5311 -118.252 # jumping subtree containing (T0191)N35 jump= 0.238478 0.658875 -0.0997457 0.706444 111.745 303.358 -88.7995 # jumping subtree containing (T0191)N35 jump= -0.172717 -0.175229 0.543317 0.802664 -9.38638 273.141 -184.057 # jumping subtree containing (T0191)N26 jump= 0.826302 -0.128081 0.518949 0.177515 119.262 58.4203 -19.524 # generation 165: best score out of 40: T0191.try5 71.2596 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2536 ## OptSubtree 772 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)K99 jump= -0.04412 0.123353 0.717041 -0.684609 -76.657 135.895 123.933 # jumping subtree containing (T0191)K99 jump= 0.989099 -0.0741739 -0.0866842 -0.0930987 -44.2786 5.67869 46.3446 # jumping subtree containing (T0191)Q85 jump= 0.930967 -0.271352 0.124608 -0.210098 -56.353 63.9406 86.0538 # jumping subtree containing (T0191)I9 jump= -0.515777 -0.289474 0.58311 -0.556921 135.947 87.127 51.8644 # generation 166: best score out of 40: T0191.try5 71.2594 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2563 ## OptSubtree 778 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K49 jump= 0.258585 0.938507 0.227149 -0.0272211 -80.1431 286.091 -135.165 # jumping subtree containing (T0191)T92 jump= -0.983638 -0.132476 -0.117691 0.0324877 -27.6083 6.79095 -51.2104 # jumping subtree containing (T0191)T92 jump= -0.0645216 0.189061 0.518039 -0.831702 -13.5592 192.384 110.437 # generation 167: best score out of 40: T0191.try5 71.2594 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2584 ## OptSubtree 781 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I52 jump= 0.348322 0.902824 -0.242022 0.0707552 93.3034 240.442 -159.029 # jumping subtree containing (T0191)T92 jump= -0.520422 0.203997 -0.640368 -0.526759 151.214 158.854 -146.393 # jumping subtree containing (T0191)T92 jump= 0.654596 -0.297905 -0.45454 -0.5255 -239.034 156.52 -1.12708 # generation 168: best score out of 40: T0191.try5 71.2594 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2598 ## OptSubtree 791 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)T92 jump= 0.958099 -0.0628801 -0.279411 -0.00460502 -25.6197 5.06218 24.4284 # jumping subtree containing (T0191)T92 jump= 0.53725 0.0759757 -0.578831 0.608724 101.011 94.8887 87.6832 # generation 169: best score out of 40: T0191.try5 71.2594 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2616 ## OptSubtree 797 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.85021 -0.194813 0.389988 0.295127 -87.5385 31.3604 -116.293 # jumping subtree containing (T0191)I71 jump= -0.161517 0.156809 0.828671 0.512472 -131.144 166.334 -225.852 # jumping subtree containing (T0191)N35 jump= -0.942607 -0.275598 -0.0978215 0.161147 -44.7293 -2.77054 -65.6348 # generation 170: best score out of 40: T0191.try5 71.2594 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2632 ## OptSubtree 805 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)A84 jump= -0.96657 0.0210422 -0.101113 0.234682 -40.5659 44.0835 5.72846 # jumping subtree containing (T0191)N35 jump= -0.98262 -0.14434 0.0356443 -0.111143 56.3611 -4.02773 -56.1422 # generation 171: best score out of 40: T0191.try5 71.2594 cost/residue, 191 clashes 0.274273 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 284 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2650 ## OptSubtree 811 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.825574 0.467663 -0.144575 -0.280743 118.926 134.306 79.1074 # jumping subtree containing (T0191)N35 jump= -0.736975 -0.219524 0.633259 -0.0875296 -0.981731 1.42731 -108.29 # jumping subtree containing (T0191)V90 jump= -0.3315 -0.189433 0.746083 -0.545511 95.2871 103.017 102.654 # jumping subtree containing (T0191)N35 jump= 0.320262 0.252612 -0.9122 -0.038861 -4.44847 -12.7442 -108.746 # jumping subtree containing (T0191)Y50 jump= 0.996869 0.0590072 0.032937 0.0410652 35.0647 5.69522 0.0945969 # generation 172: best score out of 40: T0191.try5 71.2203 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 285 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2670 ## OptSubtree 814 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)L48 jump= -0.782814 0.442347 -0.0981293 -0.4265 114.923 182.558 53.7059 # Removing break before 98 # jumping subtree containing (T0191)N35 jump= 0.68106 0.667399 -0.0424051 -0.298226 -49.8663 140.235 -185.984 # jumping subtree containing (T0191)E72 jump= -0.0569936 0.281838 -0.956972 -0.0390473 65.6271 16.076 -91.6079 # generation 173: best score out of 40: T0191.try5 71.2203 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2690 ## OptSubtree 817 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # Removing break before 98 # jumping subtree containing (T0191)N35 jump= 0.631294 -0.257436 0.652771 0.330279 123.116 108.641 -71.1935 # generation 174: best score out of 40: T0191.try5 71.2203 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2716 ## OptSubtree 824 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K82 jump= 0.995636 -0.0849215 -0.0121865 -0.0367351 10.9506 -8.57392 18.8931 # jumping subtree containing (T0191)K49 jump= -0.567726 -0.468342 -0.19721 0.647651 -155.045 129.049 -85.8987 # generation 175: best score out of 40: T0191.try5 71.2201 cost/residue, 193 clashes 0.26193 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2735 ## OptSubtree 832 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.0707985 -0.431624 0.89781 0.0512459 109.095 48.649 -86.3709 # jumping subtree containing (T0191)K99 jump= 0.986057 0.0107493 -0.0396099 -0.161266 -46.3204 11.9027 10.7946 # generation 176: best score out of 40: T0191.try5 71.2201 cost/residue, 193 clashes 0.26193 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2754 ## OptSubtree 837 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)M1 jump= -0.897449 0.29655 0.277069 -0.172848 12.7948 76.7572 95.8075 # jumping subtree containing (T0191)K99 jump= 0.119725 0.69915 0.0657234 0.701809 36.7534 331.536 -70.9346 # jumping subtree containing (T0191)N35 jump= 0.777412 -0.424953 -0.00546702 0.463698 131.065 176.04 103.909 # generation 177: best score out of 40: T0191.try5 71.2201 cost/residue, 193 clashes 0.26193 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2770 ## OptSubtree 845 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.425577 -0.896006 0.126447 -0.00822988 28.3164 217.215 -153.875 # jumping subtree containing (T0191)N35 jump= -0.665882 -0.265811 -0.596748 -0.36033 86.6784 82.2818 -166.755 # jumping subtree containing (T0191)K99 jump= 0.46182 -0.573325 0.579942 -0.348838 95.023 129.739 109.768 # jumping subtree containing (T0191)I9 jump= 0.462711 0.0763093 0.654076 0.593515 97.0172 154.421 -205.748 # generation 178: best score out of 40: T0191.try5 71.2155 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2788 ## OptSubtree 851 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y38 jump= -0.140382 0.576578 -0.131294 -0.794111 -14.4316 370.174 -95.502 # jumping subtree containing (T0191)N35 jump= 0.956063 0.292195 -0.00446002 -0.0233787 -16.4389 15.4565 -76.9438 # Removing break before 8 # generation 179: best score out of 40: T0191.try5 71.2151 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2808 ## OptSubtree 855 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K82 jump= 0.380086 0.00444265 -0.460867 -0.801946 -117.601 247.799 -116.956 # jumping subtree containing (T0191)G107 jump= -0.64759 -0.200385 0.53172 -0.507688 112.371 55.141 31.1744 # jumping subtree containing (T0191)I71 jump= -0.97796 0.177442 -0.0605555 0.0918721 -14.7697 41.7877 54.1011 # generation 180: best score out of 40: T0191.try5 71.2148 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 50 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2824 ## OptSubtree 863 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)E72 jump= 0.992777 0.0123028 0.119327 -0.00187234 0.315952 10.0095 -30.5227 # generation 181: best score out of 40: T0191.try5 71.2144 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 51 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2845 ## OptSubtree 869 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.168289 0.848069 -0.501677 0.0279161 168.509 249.826 -60.6344 # jumping subtree containing (T0191)I9 jump= 0.169744 0.552438 0.736339 0.351859 -88.4118 126.467 -191.485 # Removing break before 8 # generation 182: best score out of 40: T0191.try5 71.2144 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 51 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2862 ## OptSubtree 878 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 98 # jumping subtree containing (T0191)Q85 jump= 0.135778 -0.628132 0.765556 0.0306445 162.789 152.475 -41.9496 # jumping subtree containing (T0191)T92 jump= -0.579147 0.71651 -0.132655 -0.36552 90.1418 274.294 104.558 # jumping subtree containing (T0191)Y50 jump= -0.482335 0.0679126 0.430195 -0.760048 98.1695 188.869 98.9741 # generation 183: best score out of 40: T0191.try5 71.2144 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 51 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2882 ## OptSubtree 882 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K32 jump= -0.472247 -0.677876 0.505455 0.248963 42.1812 186.39 -199.517 # generation 184: best score out of 40: T0191.try5 71.2144 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 51 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2899 ## OptSubtree 889 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.931447 0.271438 0.129806 0.204641 -69.4947 83.8644 56.2415 # jumping subtree containing (T0191)N35 jump= -0.991035 0.0768498 -0.0344515 -0.103711 53.2803 3.00283 35.3699 # jumping subtree containing (T0191)N35 jump= -0.660279 0.585549 -0.00281925 -0.470272 70.0863 237.735 81.1609 # generation 185: best score out of 40: T0191.try5 71.2144 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 51 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2916 ## OptSubtree 896 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= 0.990403 0.0888138 0.0136264 -0.105012 -41.9208 19.8644 -35.4434 # jumping subtree containing (T0191)N35 jump= -0.235108 0.109385 -0.963264 0.0698749 60.6065 -12.7746 -52.0188 # generation 186: best score out of 40: T0191.try5 71.2144 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 51 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2929 ## OptSubtree 907 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)G88 jump= 0.999883 0.00179084 -0.000236516 0.0151769 10.7738 7.53321 -18.7277 # jumping subtree containing (T0191)N35 jump= -0.621183 0.268398 0.648691 -0.348274 -43.698 69.0986 73.2215 # generation 187: best score out of 40: T0191.try5 71.1921 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 52 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2949 ## OptSubtree 910 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # Removing break before 98 # jumping subtree containing (T0191)N35 jump= -0.89696 0.185081 0.321114 -0.241026 18.0895 66.711 79.987 # jumping subtree containing (T0191)N35 jump= 0.865775 0.388676 -0.247413 0.195323 121.418 66.5545 -133.003 # jumping subtree containing (T0191)N35 jump= 0.362848 -0.508987 0.511561 0.589558 224.112 344.09 -85.0093 # jumping subtree containing (T0191)G107 jump= 0.349335 -0.510651 0.515673 0.592691 144.043 257.509 -76.2322 # generation 188: best score out of 40: T0191.try5 71.1921 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 52 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2968 ## OptSubtree 915 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I9 jump= 0.833081 -0.489175 -0.256719 -0.0278998 -57.3756 143.832 121.367 # jumping subtree containing (T0191)V16 jump= 0.998001 -0.0256212 0.0148791 -0.0558213 -14.5722 -17.2987 1.93476 # generation 189: best score out of 40: T0191.try5 71.1921 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 52 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 2997 ## OptSubtree 917 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)D106 jump= 0.517451 -0.113382 0.822663 0.206433 76.6558 21.1258 -136.504 # generation 190: best score out of 40: T0191.try5 71.1919 cost/residue, 193 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 52 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3014 ## OptSubtree 924 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.0772162 -0.0715899 0.498213 -0.860637 51.2835 284.669 170.662 # generation 191: best score out of 40: T0191.try5 71.1918 cost/residue, 193 clashes 0.261928 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 52 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3033 ## OptSubtree 929 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)I73 jump= -0.896151 0.0154017 0.141704 -0.420234 158.294 99.1891 26.0236 # Removing break before 98 # jumping subtree containing (T0191)N35 jump= -0.683703 -0.488775 0.540617 -0.0371781 86.1259 61.8115 -206.278 # jumping subtree containing (T0191)G107 jump= -0.728985 0.410217 0.175059 0.519285 -177.911 227.902 78.0965 # generation 192: best score out of 40: T0191.try5 71.1505 cost/residue, 190 clashes 0.26193 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 53 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3051 ## OptSubtree 934 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.432577 -0.0622059 -0.325984 0.838297 -151.977 211.716 81.758 # jumping subtree containing (T0191)Y50 jump= 0.865441 0.00830977 -0.387497 -0.317471 -136.023 61.0405 -34.375 # generation 193: best score out of 40: T0191.try5 71.1504 cost/residue, 190 clashes 0.26193 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 53 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3074 ## OptSubtree 935 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)K82 jump= -0.740251 -0.225137 0.333202 0.538811 -147.676 127.984 -128.165 # jumping subtree containing (T0191)N35 jump= -0.367014 -0.103845 -0.886211 -0.262959 59.4401 22.4865 -159.545 # generation 194: best score out of 40: T0191.try5 71.1504 cost/residue, 190 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 53 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3100 ## OptSubtree 945 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= 0.840064 0.200634 0.357301 0.355491 91.5658 36.3951 -116.337 # jumping subtree containing (T0191)I9 jump= 0.474696 -0.719687 0.33697 -0.378373 58.3065 241.945 119.237 # jumping subtree containing (T0191)N35 jump= 0.98064 0.0435358 -0.0465687 0.185154 92.4411 9.22332 -25.9591 # generation 195: best score out of 40: T0191.try5 71.1499 cost/residue, 190 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 53 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3115 ## OptSubtree 954 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)N35 jump= -0.937444 0.127991 -0.0626039 -0.317643 107.945 74.345 36.6346 # generation 196: best score out of 40: T0191.try5 71.1499 cost/residue, 190 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 53 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3135 ## OptSubtree 958 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 98 # jumping subtree containing (T0191)T92 jump= -0.762919 -0.566824 -0.059996 0.305068 -112.324 128.718 -220.443 # jumping subtree containing (T0191)Q85 jump= 0.989333 -0.0733834 0.0788818 0.0980425 45.2392 12.4838 2.07702 # generation 197: best score out of 40: T0191.try5 71.1424 cost/residue, 189 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 54 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3150 ## OptSubtree 966 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)Y38 jump= 0.272466 0.946327 0.160166 -0.0676387 -67.1119 348.691 -174.144 # Removing break before 98 # generation 198: best score out of 40: T0191.try5 71.1424 cost/residue, 189 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 55 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3165 ## OptSubtree 974 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # jumping subtree containing (T0191)T92 jump= -0.464923 -0.318125 -0.435564 0.702088 -216.63 184.854 25.8797 # jumping subtree containing (T0191)M1 jump= 0.0969377 -0.736668 -0.238407 0.625368 -94.5143 302.339 20.9112 # Removing break before 98 # jumping subtree containing (T0191)T92 jump= 0.480556 -0.466932 0.643331 -0.370359 82.9305 127.451 125.429 # jumping subtree containing (T0191)T92 jump= 0.677401 -0.0393427 -0.684049 0.267687 27.5914 26.4698 57.7946 # generation 199: best score out of 40: T0191.try5 71.1424 cost/residue, 189 clashes 0.261929 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 55 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3184 ## OptSubtree 987 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # Removing break before 8 # jumping subtree containing (T0191)T92 jump= 0.896009 0.230588 0.0950412 -0.367374 -147.511 45.222 -60.9295 # jumping subtree containing (T0191)N35 jump= -0.943602 -0.0557504 -0.222663 0.238596 -92.5273 -0.328253 15.559 # jumping subtree containing (T0191)T92 jump= 0.117978 -0.27216 0.947702 -0.117775 119.308 23.2039 -43.8512 # generation 200: best score out of 40: T0191.try5 71.142 cost/residue, 189 clashes 0.26193 breaks # Cumulative usage by method: ## InsertAlignment 0 ## InsertSpecificFragment 45 ## InsertFragment 286 ## TwoFragment 64 ## CrossOver 0 ## CrossAndInsert 103 ## ReduceClash 330 ## OneRotamer 55 ## ClashingRotamer 3 ## ReduceBreak 0 ## CloseGap 67 ## JiggleSubtree 3201 ## OptSubtree 995 ## ReduceConstraint 32 ## InsertSSBond 0 ## ImproveSSBond 0 # command:# naming current conformation T0191.try5-opt # command:# command:# request to SCWRL produces command: scwrl -i /projects/compbio/tmp/to_scwrl_880003729.pdb -s /projects/compbio/tmp/to_scwrl_880003729.seq -o /projects/compbio/tmp/from_scwrl_880003729.pdb -a /projects/compbio/tmp/from_scwrl_880003729_a.pdb -b /projects/compbio/tmp/from_scwrl_880003729_b.pdb > /projects/compbio/tmp/scwrl_880003729.log # conformation set from SCWRL output # command:# naming current conformation T0191.try5-opt-scwrl # command:# command:# CostConform T0191.try5-opt-scwrl costs 73.4937 T0191.try5-opt costs 71.1432 T0191.try5 costs 73.3958 T0191.try5-try3-s costs 73.8807 T0191.try5-try1-s costs 75.2059 T0191.rand costs 407.368 # command:CPU_time= 3.79455e+06 msec, elapsed time= 3.80202e+06 msec) # command: