PFRMAT SS TARGET T0191 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0191.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 105 METHOD MODEL 1 M C 0.996 I C 0.841 N C 0.634 A C 0.425 K C 0.491 T C 0.401 K E 0.636 V E 0.858 I E 0.911 G E 0.922 L E 0.898 I E 0.723 G E 0.401 H C 0.385 P C 0.421 V G 0.319 E G 0.300 H T 0.349 S C 0.376 F S 0.417 S C 0.549 P H 0.810 I H 0.883 M H 0.918 H H 0.970 N H 0.984 A H 0.988 A H 0.992 F H 0.991 K H 0.973 D H 0.875 K T 0.646 G T 0.793 L C 0.859 N C 0.629 Y E 0.653 V E 0.884 Y E 0.948 V E 0.911 A E 0.758 F E 0.597 D E 0.540 V C 0.512 L C 0.853 P G 0.550 E G 0.468 N G 0.357 L H 0.864 K H 0.975 Y H 0.985 V H 0.992 I H 0.989 D H 0.955 G H 0.931 A H 0.934 K H 0.880 A H 0.646 L T 0.756 G T 0.904 I C 0.721 V E 0.374 G E 0.728 F E 0.853 N E 0.906 V E 0.843 T E 0.636 I C 0.378 P C 0.275 H H 0.269 K H 0.695 I H 0.904 E H 0.892 I H 0.899 M H 0.905 K H 0.816 Y H 0.788 L H 0.628 D H 0.485 E H 0.424 I H 0.365 D C 0.619 K H 0.986 D H 0.989 A H 0.991 Q H 0.977 L H 0.856 I T 0.671 G T 0.816 A C 0.667 V E 0.382 N E 0.596 T E 0.783 I E 0.867 K E 0.886 I E 0.466 E T 0.519 D T 0.881 G T 0.501 K E 0.475 A E 0.905 I E 0.920 G E 0.826 Y E 0.670 N E 0.524 T C 0.387 D C 0.405 G T 0.269 I C 0.325 G C 0.826 A C 0.998 END