echo "InfilePrefix decoys/"> read-decoys.script ls decoys/*T0190*pdb* \ | sed 's;decoys/;ReadConformPDB ;' \ >> read-decoys.script echo "InfilePrefix" >> read-decoys.script ls robetta[1-5]*pdb* \ | sed 's;rob;ReadConformPDB rob;' \ >> read-decoys.script ls: robetta[1-5]*pdb*: No such file or directory chgrp protein read-decoys.script chmod g+w read-decoys.script /cse/faculty/karplus/undertaker/undertaker < /projects/compbio/experiments/casp5/scripts-human/compare-real.under # command:# SetRealCost created real_cost = # ( 1 * rmsd-ca + 1 * rmsd ) # command:# Prefix for input files set to # command:# reading script from file define-score.script # Prefix for input files set to /projects/kestrel/users/karplus/burial/undertaker/atoms-inputs/ # reading monomeric-50pc.atoms # After reading monomeric-50pc.atoms have 448 chains in training database # 111547 residues have no bad marker # 670 residues lack atoms needed to compute omega # 322 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 6 # HAS_OXT 325 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 523 # HAS_UNKNOWN_ATOMS 2 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 208 # NON_PLANAR_PEPTIDE 28 # Note: may sum to more than number of residues, # because one residue may have multiple problems # Reading rotamer library from monomeric-50pc.rot # Prefix for input files set to /projects/kestrel/users/karplus/burial/undertaker/spots/ # ReadAtomType pdb-name.types Read AtomType pdb-name with 37 types. # ReadClashTable pdb-atom-name.clash # Read ClashTable pdb-atom-name Reading spots from monomeric-50pc-dry-5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-5.hist # created burial cost function dry5 with radius 5 Reading spots from monomeric-50pc-wet-6.5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-wet-6.5.hist # created burial cost function wet6.5 with radius 6.5 Reading spots from monomeric-50pc-dry-6.5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-6.5.hist # created burial cost function dry6.5 with radius 6.5 Reading spots from monomeric-50pc-generic-6.5.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-generic-6.5.hist # created burial cost function gen6.5 with radius 6.5 Reading spots from monomeric-50pc-dry-8.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-8.hist # created burial cost function dry8 with radius 8 Reading spots from monomeric-50pc-dry-10.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-10.hist # created burial cost function dry10 with radius 10 Reading spots from monomeric-50pc-dry-12.spot. Read prototypes from /projects/kestrel/users/karplus/burial/undertaker/spots/../normalize_prototypes/prototypes # reading histogram from smoothed-monomeric-50pc-dry-12.hist # created burial cost function dry12 with radius 12 # reading histogram from monomeric-smoothed-alpha.hist # created alpha cost function alpha with offset 0 and 360 bins # reading histogram from monomeric-smoothed-alpha-1.hist # created alpha cost function alpha_prev with offset -1 and 360 bins CPU_time= 10710 msec, elapsed time= 12370.5 msec) # Prefix for input files set to # Reading target chain from PDB file T0190.blank.pdb Read PDB file T0190.blank.pdb as target. Have 114 residues and 922 atoms. # No conformations to remove in PopConform # Prefix for input files set to /projects/compbio/lib/alphabet/ # Read 3 alphabets from alpha.alphabet # Prefix for input files set to # reading predictions from T0190.t2k.alpha.rdb # created predicted alpha cost function pred_alpha2 with 360 bins # SetCost created cost = # ( 0.2 * gen6.5(6.5) + 1 * wet6.5(6.5, /log(length)) + 3 * dry5(5) + 9 * dry6.5(6.5) + 4 * dry8(8) + 1 * dry12(12) + 1 * phobic_fit + 0.2 * sidechain + 1.5 * clashes + -0.2 * sidechain_clashes + 0.5 * backbone_clashes + 30 * break + 1 * pred_alpha2 + 0.05 * constraints + 1 * contact_order ) # command:# Will now start reporting costs to score-decoys-unsorted.rdb # command:CPU_time= 14010 msec, elapsed time= 15754.6 msec) # command:# Prefix for input files set to # command:# reading script from file read-decoys.script # Prefix for input files set to decoys/ # Reading conformation from PDB file T0190.try1-al10.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1-al12.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1-al2.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1-al4.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1-al6.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1-al8.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1-opt-scwrl.pdb.gz # Reading conformation from PDB file T0190.try1-opt.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.0.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.1.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.10.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.11.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.12.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.13.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.14.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.15.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.16.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.17.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.18.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.19.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.2.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.20.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.3.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.4.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.5.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.6.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.7.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.8.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try1.9.60.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-al10.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-al12.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-al2.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-al4.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-al6.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-al8.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2-opt-scwrl.pdb.gz # Reading conformation from PDB file T0190.try2-opt.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.0.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.1.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.10.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.11.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.12.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.13.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.14.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.15.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.16.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.17.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.18.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.19.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.2.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.20.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.3.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.4.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.5.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.6.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.7.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.8.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try2.9.80.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try3-opt-scwrl.pdb.gz # Reading conformation from PDB file T0190.try3-opt.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try3.0.100.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try3.1.100.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try3.2.100.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try3.3.100.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try3.4.100.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try4-opt-scwrl.pdb.gz # Reading conformation from PDB file T0190.try4-opt.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try4.0.150.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try4.1.150.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Reading conformation from PDB file T0190.try4.2.150.pdb.gz Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms Bad short name: CS for alphabet: pdb_atoms # Prefix for input files set to # command:# Prefix for input files set to # command:# Reading conformation from PDB file real.pdb # command:# Saving current conformation as real # command:CPU_time= 18580 msec, elapsed time= 21210.7 msec) # command:# CostConform Not enough atoms (only 0) to locate spot for (T0190)A1 Not enough atoms (only 0) to locate spot for (T0190)Q2 Not enough atoms (only 0) to locate spot for (T0190)Q3 Not enough atoms (only 0) to locate spot for (T0190)A1 Not enough atoms (only 0) to locate spot for (T0190)Q2 Not enough atoms (only 0) to locate spot for (T0190)Q3 Not enough atoms (only 0) to locate spot for (T0190)A1 Not enough atoms (only 0) to locate spot for (T0190)Q2 Not enough atoms (only 0) to locate spot for (T0190)Q3 Not enough atoms (only 0) to locate spot for (T0190)A1 Not enough atoms (only 0) to locate spot for (T0190)Q2 Not enough atoms (only 0) to locate spot for (T0190)Q3 Not enough atoms (only 0) to locate spot for (T0190)A1 Not enough atoms (only 0) to locate spot for (T0190)Q2 Not enough atoms (only 0) to locate spot for (T0190)Q3 Not enough atoms (only 0) to locate spot for (T0190)A1 Not enough atoms (only 0) to locate spot for (T0190)Q2 Not enough atoms (only 0) to locate spot for (T0190)Q3 real.pdb costs 69.5102 real_cost = 0 T0190.try4.2.150.pdb.gz costs 54.3058 real_cost = 5.17971 T0190.try4.1.150.pdb.gz costs 54.6365 real_cost = 5.21408 T0190.try4.0.150.pdb.gz costs 54.3812 real_cost = 5.21674 T0190.try4-opt.pdb.gz costs 54.3003 real_cost = 5.17971 T0190.try4-opt-scwrl.pdb.gz costs 57.0352 real_cost = 5.20181 T0190.try3.4.100.pdb.gz costs 54.5887 real_cost = 5.22019 T0190.try3.3.100.pdb.gz costs 54.8318 real_cost = 5.1026 T0190.try3.2.100.pdb.gz costs 54.9567 real_cost = 5.54184 T0190.try3.1.100.pdb.gz costs 54.9497 real_cost = 5.13766 T0190.try3.0.100.pdb.gz costs 54.7766 real_cost = 5.21154 T0190.try3-opt.pdb.gz costs 54.5834 real_cost = 5.22018 T0190.try3-opt-scwrl.pdb.gz costs 56.8921 real_cost = 5.19422 T0190.try2.9.80.pdb.gz costs 57.7248 real_cost = 4.91434 T0190.try2.8.80.pdb.gz costs 57.6025 real_cost = 5.38683 T0190.try2.7.80.pdb.gz costs 57.2851 real_cost = 5.10358 T0190.try2.6.80.pdb.gz costs 58.0213 real_cost = 4.54778 T0190.try2.5.80.pdb.gz costs 57.0923 real_cost = 5.3534 T0190.try2.4.80.pdb.gz costs 56.7138 real_cost = 4.8545 T0190.try2.3.80.pdb.gz costs 56.4255 real_cost = 5.45618 T0190.try2.20.80.pdb.gz costs 56.6908 real_cost = 5.34929 T0190.try2.2.80.pdb.gz costs 57.3696 real_cost = 5.03568 T0190.try2.19.80.pdb.gz costs 56.6204 real_cost = 4.47784 T0190.try2.18.80.pdb.gz costs 56.935 real_cost = 4.25101 T0190.try2.17.80.pdb.gz costs 56.863 real_cost = 4.99896 T0190.try2.16.80.pdb.gz costs 57.2026 real_cost = 5.71353 T0190.try2.15.80.pdb.gz costs 57.9915 real_cost = 5.26489 T0190.try2.14.80.pdb.gz costs 56.5812 real_cost = 4.90464 T0190.try2.13.80.pdb.gz costs 57.7487 real_cost = 4.80061 T0190.try2.12.80.pdb.gz costs 57.5241 real_cost = 4.41339 T0190.try2.11.80.pdb.gz costs 57.0187 real_cost = 4.42821 T0190.try2.10.80.pdb.gz costs 57.6023 real_cost = 4.62009 T0190.try2.1.80.pdb.gz costs 56.6682 real_cost = 5.2997 T0190.try2.0.80.pdb.gz costs 57.4225 real_cost = 5.20359 T0190.try2-opt.pdb.gz costs 56.6908 real_cost = 5.34929 T0190.try2-opt-scwrl.pdb.gz costs 56.806 real_cost = 5.21057 T0190.try2-al8.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try2-al6.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try2-al4.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try2-al2.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try2-al12.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try2-al10.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try1.9.60.pdb.gz costs 61.3547 real_cost = 5.9721 T0190.try1.8.60.pdb.gz costs 61.9292 real_cost = 4.27285 T0190.try1.7.60.pdb.gz costs 62.1958 real_cost = 4.86545 T0190.try1.6.60.pdb.gz costs 60.2521 real_cost = 5.82124 T0190.try1.5.60.pdb.gz costs 62.1382 real_cost = 5.46038 T0190.try1.4.60.pdb.gz costs 61.9192 real_cost = 4.8196 T0190.try1.3.60.pdb.gz costs 60.9863 real_cost = 5.3483 T0190.try1.20.60.pdb.gz costs 57.6955 real_cost = 4.21775 T0190.try1.2.60.pdb.gz costs 61.4226 real_cost = 4.85074 T0190.try1.19.60.pdb.gz costs 60.6965 real_cost = 4.75534 T0190.try1.18.60.pdb.gz costs 62.3467 real_cost = 4.95627 T0190.try1.17.60.pdb.gz costs 61.8749 real_cost = 4.61676 T0190.try1.16.60.pdb.gz costs 61.9724 real_cost = 6.07942 T0190.try1.15.60.pdb.gz costs 61.6957 real_cost = 5.6346 T0190.try1.14.60.pdb.gz costs 61.826 real_cost = 5.60573 T0190.try1.13.60.pdb.gz costs 60.7136 real_cost = 6.24888 T0190.try1.12.60.pdb.gz costs 59.8787 real_cost = 4.2471 T0190.try1.11.60.pdb.gz costs 61.9299 real_cost = 4.97302 T0190.try1.10.60.pdb.gz costs 61.0385 real_cost = 6.43339 T0190.try1.1.60.pdb.gz costs 61.7698 real_cost = 4.59995 T0190.try1.0.60.pdb.gz costs 62.1325 real_cost = 6.093 T0190.try1-opt.pdb.gz costs 57.6955 real_cost = 4.21775 T0190.try1-opt-scwrl.pdb.gz costs 57.6585 real_cost = 4.3509 T0190.try1-al8.pdb.gz costs 64.9279 real_cost = 5.18554 T0190.try1-al6.pdb.gz costs 65.1613 real_cost = 5.07442 T0190.try1-al4.pdb.gz costs 64.9558 real_cost = 5.6148 T0190.try1-al2.pdb.gz costs 64.9558 real_cost = 5.6148 T0190.try1-al12.pdb.gz costs 64.4258 real_cost = 5.73927 T0190.try1-al10.pdb.gz costs 64.4258 real_cost = 5.73927 # command:# command:CPU_time= 32790 msec, elapsed time= 35489 msec) # command:/projects/compbio/bin/sorttbl rmsd cost < score-decoys-unsorted.rdb > score-real-decoys.rdb rm score-decoys-unsorted.rdb chgrp protein score-real-decoys.rdb chmod g+w score-real-decoys.rdb make: *** No rule to make target `score-real_1-decoys.rdb'. make: *** No rule to make target `score-real_2-decoys.rdb'. make: *** No rule to make target `score-real_3-decoys.rdb'. make: *** No rule to make target `score-real_4-decoys.rdb'.