Best Alignments for T0189

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0189-1rkd-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0189-1rkd-2track-protein-STR-local-adpstyle5.pw.al 5.9352e-48 1rkd c.72.1.1
T0189-1liiA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0189-1liiA-2track-protein-STR-local-adpstyle5.pw.al 2.2657e-33
T0189-1jxhA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0189-1jxhA-2track-protein-STR-local-adpstyle5.pw.al 1.3734e-11 c.72.1.2
T0189-1gc5A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0189-1gc5A-2track-protein-STR-local-adpstyle5.pw.al 5.4238e-07 1gc5A c.72.1.3
T0189-1e0tA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0189-1e0tA-2track-protein-STR-local-adpstyle5.pw.al 5.1093e-03 1a49A b.58.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001