PFRMAT SS
TARGET T0189
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0189.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 188
METHOD
MODEL 1
M C 0.996
V E 0.563
L E 0.864
T E 0.975
V E 0.981
T E 0.916
L E 0.581
N S 0.354
P E 0.336
A E 0.602
L E 0.687
D E 0.752
R E 0.684
E E 0.718
I E 0.607
F E 0.546
I C 0.381
E C 0.352
D C 0.341
F C 0.650
Q C 0.842
V T 0.541
N T 0.552
R C 0.359
L C 0.409
Y C 0.485
R C 0.460
I C 0.406
N C 0.375
D C 0.435
L C 0.349
S C 0.478
K C 0.399
T E 0.332
Q E 0.373
M E 0.372
S C 0.555
P T 0.388
G S 0.476
G C 0.401
K H 0.851
G H 0.932
I H 0.979
N H 0.989
V H 0.995
S H 0.997
I H 0.997
A H 0.998
L H 0.997
S H 0.986
K H 0.892
L T 0.666
G T 0.817
V C 0.847
P C 0.378
S E 0.911
V E 0.982
A E 0.991
T E 0.968
G E 0.854
F E 0.659
V C 0.360
G C 0.403
G S 0.337
Y T 0.284
M H 0.565
G H 0.860
K H 0.982
I H 0.987
L H 0.987
V H 0.989
E H 0.986
E H 0.966
L H 0.944
R H 0.926
K H 0.855
I H 0.643
S T 0.407
K T 0.654
L T 0.700
I C 0.590
T C 0.716
T E 0.322
N E 0.335
F E 0.553
V E 0.808
Y E 0.872
V E 0.823
E E 0.426
G T 0.741
E T 0.614
T C 0.400
R C 0.486
E E 0.628
N E 0.742
I E 0.879
E E 0.969
I E 0.986
I E 0.991
D E 0.980
E E 0.928
K E 0.505
N T 0.728
K T 0.766
T S 0.626
I C 0.503
T E 0.850
A E 0.920
I E 0.921
N E 0.827
F E 0.670
P C 0.454
G C 0.434
P C 0.294
D C 0.218
V H 0.297
T H 0.408
D H 0.505
M H 0.524
D H 0.551
V H 0.777
N H 0.845
H H 0.850
F H 0.853
L H 0.871
R H 0.846
R H 0.818
Y H 0.800
K H 0.842
M H 0.868
T H 0.837
L H 0.706
S T 0.417
K T 0.664
V C 0.764
D S 0.715
C E 0.977
V E 0.996
V E 0.998
I E 0.981
S E 0.533
G S 0.373
S S 0.363
I C 0.336
P C 0.431
P T 0.371
G T 0.311
V C 0.518
N C 0.723
E H 0.884
G H 0.958
I H 0.976
C H 0.993
N H 0.995
E H 0.996
L H 0.997
V H 0.997
R H 0.996
L H 0.994
A H 0.994
R H 0.976
E H 0.897
R T 0.816
G T 0.938
V C 0.763
F E 0.517
V E 0.914
F E 0.899
V E 0.849
E C 0.589
Q C 0.440
T T 0.372
P S 0.320
R C 0.338
L H 0.346
L H 0.508
E H 0.567
R H 0.644
I H 0.771
Y H 0.832
E H 0.843
G H 0.823
P H 0.621
E H 0.445
F T 0.319
P C 0.795
N S 0.615
V E 0.867
V E 0.933
K E 0.863
P C 0.417
D C 0.703
L H 0.863
R H 0.961
G H 0.972
N H 0.987
H H 0.981
A H 0.960
S H 0.951
F H 0.912
L H 0.512
G T 0.728
V C 0.654
D C 0.705
L C 0.532
K C 0.447
T C 0.488
F H 0.713
D H 0.714
D H 0.802
Y H 0.957
V H 0.975
K H 0.976
L H 0.978
A H 0.981
E H 0.971
K H 0.965
L H 0.954
A H 0.890
E H 0.717
K T 0.580
S C 0.561
Q C 0.520
V E 0.806
S E 0.980
V E 0.991
V E 0.989
S E 0.883
Y E 0.456
E C 0.377
V T 0.324
K T 0.711
N T 0.505
D E 0.688
I E 0.958
V E 0.976
A E 0.954
T E 0.717
R T 0.750
E T 0.791
G S 0.303
V E 0.777
W E 0.933
L E 0.937
I E 0.847
R E 0.544
S C 0.438
K C 0.447
E C 0.405
E C 0.516
I E 0.621
D E 0.893
T E 0.874
S E 0.872
H E 0.670
L C 0.449
L C 0.338
G T 0.316
A T 0.380
G H 0.465
D H 0.852
A H 0.960
Y H 0.987
V H 0.990
A H 0.991
G H 0.994
M H 0.994
V H 0.988
Y H 0.975
Y H 0.935
F H 0.780
I H 0.515
K C 0.485
H T 0.799
G T 0.792
A C 0.621
N C 0.747
F H 0.975
L H 0.979
E H 0.985
M H 0.994
A H 0.995
K H 0.993
F H 0.993
G H 0.995
F H 0.994
A H 0.992
S H 0.991
A H 0.982
L H 0.968
A H 0.956
A H 0.923
T H 0.811
R H 0.614
R H 0.358
K T 0.466
E T 0.475
K C 0.481
Y C 0.391
M C 0.555
P C 0.706
D C 0.772
L H 0.948
E H 0.953
A H 0.951
I H 0.972
K H 0.954
K H 0.909
E H 0.827
Y H 0.601
D T 0.453
H T 0.530
F C 0.546
T C 0.444
V E 0.684
E E 0.729
R E 0.630
V C 0.676
K C 0.998
END