Best Alignments for T0188

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0188-1eo1A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0188-1eo1A-2track-protein-STR-local-adpstyle5.pw.al 5.7387e-22 1eo1A c.55.5.1
T0188-1qorA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0188-1qorA-2track-protein-STR-local-adpstyle5.pw.al 4.2158e-02 1qorA c.2.1.1
T0188-1k1eA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0188-1k1eA-2track-protein-STR-local-adpstyle5.pw.al 5.8500e-02 c.108.1.5
T0188-1hy3A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0188-1hy3A-2track-protein-STR-local-adpstyle5.pw.al 4.6330e-01
T0188-1dxy-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0188-1dxy-2track-protein-STR-local-adpstyle5.pw.al 8.2484e-01 1dxy c.23.12.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001