Best Alignments for T0187

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0187-1je0A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1je0A-2track-protein-STR-local-adpstyle5.pw.al 9.4872e-01 c.56.2.1
T0187-1jmxA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1jmxA-2track-protein-STR-local-adpstyle5.pw.al 1.8126e+00 a.3.1.7
T0187-1ex2A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1ex2A-2track-protein-STR-local-adpstyle5.pw.al 2.3449e+00 1ex2A c.51.4.2
T0187-1lx7A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1lx7A-2track-protein-STR-local-adpstyle5.pw.al 2.0531e+00
T0187-1jeqB-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1jeqB-2track-protein-STR-local-adpstyle5.pw.al 3.6129e+00 1jeqB e.31.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001