Best Alignments for T0187

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0187-1srvA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1srvA-2track-protein-STR-local-adpstyle5.pw.al 3.7253e-01 1derA c.8.5.1
T0187-1jmxA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1jmxA-2track-protein-STR-local-adpstyle5.pw.al 2.4490e+00 a.3.1.7
T0187-1gajA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1gajA-2track-protein-STR-local-adpstyle5.pw.al 1.7199e+00 1gajA c.37.1.12
T0187-1i58A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1i58A-2track-protein-STR-local-adpstyle5.pw.al 3.1216e+00 1b3qA d.122.1.3
T0187-1ex2A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0187-1ex2A-2track-protein-STR-local-adpstyle5.pw.al 3.9556e+00 1ex2A c.51.4.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001