PFRMAT SS
TARGET T0187
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0187.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 30
METHOD
MODEL 1
G C 0.734
P C 0.728
A C 0.534
W C 0.442
P C 0.533
D T 0.786
S T 0.829
S T 0.766
T T 0.711
S H 0.497
E H 0.728
D H 0.841
A H 0.987
L H 0.991
K H 0.993
V H 0.993
L H 0.990
E H 0.984
K H 0.971
Y H 0.921
G C 0.853
I C 0.814
E C 0.710
T C 0.745
S C 0.639
E H 0.414
S H 0.479
V H 0.435
K H 0.511
R H 0.536
A H 0.485
I H 0.489
L C 0.381
Q C 0.648
E C 0.729
T C 0.615
P T 0.480
K T 0.542
H T 0.449
L T 0.459
S T 0.538
N T 0.464
V E 0.540
E E 0.693
I E 0.868
H E 0.932
L E 0.953
I E 0.916
G E 0.653
N C 0.612
V H 0.491
Q H 0.923
K H 0.973
V H 0.986
C H 0.997
D H 0.997
E H 0.998
A H 0.998
K H 0.997
S H 0.992
L H 0.990
A H 0.980
K H 0.954
E H 0.931
K H 0.850
G C 0.904
F C 0.841
N C 0.673
A E 0.849
E E 0.964
I E 0.962
I E 0.823
T E 0.329
T T 0.391
S T 0.387
L H 0.511
D H 0.646
C H 0.751
E H 0.897
A H 0.967
R H 0.979
E H 0.977
A H 0.985
G H 0.977
R H 0.982
F H 0.981
I H 0.987
A H 0.983
S H 0.986
I H 0.987
M H 0.978
K H 0.984
E H 0.986
V H 0.985
K H 0.955
F H 0.944
K H 0.793
D C 0.885
R C 0.704
P C 0.571
L C 0.511
K C 0.777
K C 0.713
P C 0.464
A E 0.925
A E 0.988
L E 0.993
I E 0.985
F E 0.930
G T 0.470
G T 0.746
E T 0.484
T E 0.738
V E 0.860
V E 0.964
H E 0.955
V E 0.866
K E 0.615
G C 0.448
N C 0.535
G C 0.570
I C 0.487
G C 0.532
G C 0.390
R H 0.744
N H 0.917
Q H 0.997
E H 0.998
L H 0.997
A H 0.998
L H 0.996
S H 0.988
A H 0.990
A H 0.982
I H 0.963
A H 0.939
L H 0.914
E H 0.863
G C 0.373
I T 0.813
E T 0.836
G T 0.813
V E 0.534
I E 0.889
L E 0.959
C E 0.911
S E 0.791
A C 0.427
G C 0.565
T C 0.896
END