PFRMAT SS TARGET T0187 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0187.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 30 METHOD MODEL 1 M C 0.992 F C 0.797 D C 0.656 P H 0.354 E H 0.590 S H 0.674 L H 0.795 K H 0.919 K H 0.935 L H 0.960 A H 0.976 I H 0.982 E H 0.985 I H 0.989 V H 0.993 K H 0.992 K H 0.983 S H 0.979 I H 0.951 E H 0.814 A H 0.528 V S 0.329 F C 0.832 P H 0.690 D H 0.850 R H 0.862 A H 0.919 V H 0.834 K H 0.603 E T 0.482 T T 0.474 L C 0.575 P C 0.693 K C 0.448 L C 0.576 N C 0.430 L T 0.545 D S 0.460 R C 0.551 V E 0.696 I E 0.963 L E 0.989 V E 0.984 A E 0.919 V C 0.464 G S 0.391 K H 0.528 A H 0.745 A H 0.947 W H 0.979 R H 0.987 M H 0.993 A H 0.996 K H 0.995 A H 0.992 A H 0.992 Y H 0.988 E H 0.944 V H 0.852 L H 0.602 G T 0.311 K C 0.304 K C 0.233 I T 0.233 R C 0.345 K T 0.338 G E 0.432 V E 0.915 V E 0.966 V E 0.929 T E 0.756 K C 0.468 Y T 0.552 G T 0.471 H C 0.441 S C 0.469 E C 0.547 G C 0.597 P C 0.307 I C 0.447 D C 0.374 D E 0.379 F E 0.797 E E 0.930 I E 0.965 Y E 0.952 E E 0.870 A E 0.470 G C 0.593 H C 0.649 P C 0.678 V C 0.600 P C 0.658 D C 0.665 E H 0.892 N H 0.937 T H 0.978 I H 0.988 K H 0.990 T H 0.988 T H 0.993 R H 0.996 R H 0.994 V H 0.991 L H 0.992 E H 0.975 L H 0.933 V H 0.854 D H 0.542 Q T 0.546 L C 0.508 N C 0.863 E T 0.660 N T 0.796 D C 0.594 T E 0.855 V E 0.988 L E 0.996 F E 0.994 L E 0.978 L E 0.789 S C 0.441 G C 0.481 G T 0.353 G T 0.273 S G 0.289 S T 0.272 L T 0.227 F E 0.318 E E 0.422 L C 0.490 P C 0.558 L C 0.318 E T 0.597 G T 0.581 V C 0.685 S C 0.883 L H 0.943 E H 0.949 E H 0.970 I H 0.987 Q H 0.984 K H 0.983 L H 0.988 T H 0.995 S H 0.995 A H 0.996 L H 0.995 L H 0.990 K H 0.953 S T 0.569 G T 0.926 A C 0.814 S C 0.787 I H 0.973 E H 0.986 E H 0.989 I H 0.993 N H 0.991 T H 0.991 V H 0.991 R H 0.990 K H 0.985 H H 0.964 L H 0.925 S H 0.733 Q H 0.509 V H 0.371 K C 0.305 G H 0.370 G H 0.708 R H 0.863 F H 0.905 A H 0.831 E H 0.806 R H 0.678 V H 0.583 F T 0.335 P T 0.441 A C 0.616 K S 0.368 V E 0.900 V E 0.952 A E 0.990 L E 0.996 V E 0.990 L E 0.958 S E 0.836 D E 0.493 V C 0.404 L S 0.302 G S 0.411 D S 0.507 R C 0.595 L G 0.417 D G 0.511 V G 0.467 I E 0.251 A C 0.363 S C 0.356 G C 0.542 P C 0.530 A C 0.458 W C 0.513 P C 0.453 D C 0.648 S T 0.361 S T 0.266 T C 0.423 S H 0.793 E H 0.812 D H 0.866 A H 0.987 L H 0.995 K H 0.996 V H 0.997 L H 0.996 E H 0.978 K H 0.901 Y H 0.554 G T 0.818 I C 0.569 E C 0.620 T C 0.739 S C 0.941 E H 0.740 S H 0.764 V H 0.840 K H 0.885 R H 0.754 A H 0.697 I H 0.628 L H 0.371 Q C 0.515 E C 0.481 T C 0.414 P C 0.515 K T 0.418 H T 0.334 L C 0.464 S T 0.360 N T 0.381 V E 0.415 E E 0.712 I E 0.930 H E 0.969 L E 0.973 I E 0.936 G E 0.696 N C 0.577 V C 0.308 Q H 0.674 K H 0.866 V H 0.935 C H 0.969 D H 0.980 E H 0.987 A H 0.986 K H 0.990 S H 0.987 L H 0.990 A H 0.989 K H 0.974 E H 0.856 K T 0.707 G T 0.907 F C 0.929 N S 0.420 A E 0.916 E E 0.980 I E 0.983 I E 0.912 T E 0.378 T C 0.295 S T 0.235 L H 0.387 D H 0.499 C H 0.576 E H 0.728 A H 0.955 R H 0.970 E H 0.972 A H 0.980 G H 0.989 R H 0.994 F H 0.996 I H 0.997 A H 0.997 S H 0.997 I H 0.997 M H 0.997 K H 0.994 E H 0.992 V H 0.988 K H 0.972 F H 0.833 K T 0.703 D T 0.731 R C 0.784 P C 0.782 L C 0.559 K C 0.503 K S 0.613 P C 0.445 A E 0.959 A E 0.993 L E 0.992 I E 0.931 F E 0.450 G S 0.492 G S 0.456 E C 0.384 T C 0.478 V E 0.582 V E 0.857 H E 0.920 V E 0.848 K E 0.698 G S 0.323 N S 0.337 G C 0.368 I C 0.442 G S 0.409 G C 0.498 R H 0.491 N H 0.756 Q H 0.923 E H 0.957 L H 0.957 A H 0.981 L H 0.984 S H 0.987 A H 0.987 A H 0.987 I H 0.964 A H 0.904 L H 0.816 E H 0.489 G T 0.658 I C 0.681 E T 0.386 G T 0.570 V E 0.429 I E 0.836 L E 0.955 C E 0.954 S E 0.888 A E 0.698 G E 0.357 T C 0.338 D S 0.319 G C 0.417 T C 0.493 D S 0.423 G S 0.346 P C 0.452 T C 0.307 D S 0.320 A C 0.328 A T 0.340 G E 0.373 G E 0.732 I E 0.811 V E 0.601 D C 0.679 G T 0.355 S H 0.396 T H 0.752 A H 0.957 K H 0.966 T H 0.971 L H 0.965 K H 0.947 A H 0.729 M T 0.825 G T 0.856 E C 0.707 D C 0.845 P H 0.767 Y H 0.843 Q H 0.873 Y H 0.923 L H 0.820 K H 0.481 N T 0.426 N C 0.292 D C 0.497 S H 0.505 Y H 0.908 N H 0.935 A H 0.949 L H 0.953 K H 0.907 K H 0.822 S H 0.622 G H 0.513 A H 0.436 L H 0.544 L E 0.428 I E 0.403 T E 0.315 G C 0.694 P T 0.719 T T 0.660 G C 0.447 T C 0.440 N E 0.302 V E 0.381 N E 0.434 D E 0.537 L E 0.743 I E 0.825 I E 0.920 G E 0.924 L E 0.888 I E 0.735 V C 0.982 END