PFRMAT SS
TARGET T0185
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-alpha-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	   11 (1 ABCDEFGHIST )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0185.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 71
METHOD
MODEL 1
M B 0.345
K E 0.506
I E 0.681
H E 0.710
F E 0.511
V E 0.207
G E 0.331
I S 0.323
G D 0.475
G H 0.279
I H 0.524
G H 0.627
M H 0.822
S H 0.905
A H 0.950
V H 0.964
A H 0.959
L H 0.974
H H 0.977
E H 0.957
F H 0.862
S H 0.862
N B 0.617
G T 0.494
N B 0.539
D E 0.557
V A 0.466
Y E 0.214
G E 0.199
S E 0.230
N E 0.284
I I 0.489
E H 0.382
E H 0.322
T B 0.233
E H 0.549
R H 0.534
T H 0.770
A H 0.863
Y H 0.901
L H 0.936
R H 0.831
K H 0.886
L B 0.707
G T 0.606
I B 0.694
P E 0.640
I E 0.445
F E 0.517
V E 0.227
P S 0.147
H B 0.146
S B 0.371
A I 0.701
D H 0.406
N S 0.515
W A 0.222
Y I 0.269
D S 0.470
P E 0.345
D G 0.473
L E 0.699
V E 0.825
I E 0.640
K T 0.327
T B 0.287
P S 0.297
A B 0.219
V B 0.319
R B 0.304
D H 0.299
D S 0.523
N E 0.569
P H 0.794
E H 0.931
I H 0.950
V H 0.957
R H 0.956
A H 0.948
R H 0.842
M H 0.865
E B 0.826
R T 0.495
V B 0.604
P E 0.525
I E 0.292
E E 0.284
N H 0.260
R H 0.514
L H 0.791
H H 0.889
Y H 0.900
F H 0.895
R H 0.905
D H 0.907
T H 0.791
L H 0.673
K H 0.473
R H 0.305
E H 0.312
END