PFRMAT SS TARGET T0182 METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 6 (1 EBGHTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0182.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 300 METHOD MODEL 1 M C 0.865 I C 0.678 R C 0.553 I C 0.618 K C 0.805 T C 0.938 P H 0.961 S H 0.974 E H 0.980 I H 0.998 E H 0.998 K H 0.997 M H 0.997 K H 0.998 K H 0.995 A H 0.986 G H 0.990 K H 0.991 A H 0.990 V H 0.986 A H 0.991 V H 0.995 A H 0.995 L H 0.989 R H 0.987 E H 0.982 V H 0.973 R H 0.869 K H 0.840 V H 0.714 I C 0.525 V T 0.790 P T 0.868 G T 0.909 K T 0.597 T C 0.692 A H 0.973 W H 0.984 D H 0.985 V H 0.991 E H 0.994 T H 0.989 L H 0.990 V H 0.992 L H 0.988 E H 0.987 I H 0.986 F H 0.974 K H 0.963 K H 0.946 L H 0.902 R C 0.675 V C 0.617 K C 0.478 P T 0.390 A T 0.410 F T 0.428 K T 0.433 G T 0.435 Y T 0.365 G C 0.455 G C 0.515 Y C 0.449 K C 0.401 Y T 0.315 A E 0.667 T E 0.795 C E 0.748 V E 0.510 S T 0.440 V T 0.645 N T 0.719 E T 0.608 E E 0.284 V E 0.438 V E 0.427 H E 0.391 G C 0.427 L C 0.424 P T 0.602 L T 0.742 K T 0.733 E T 0.508 K C 0.374 V E 0.599 F E 0.538 K T 0.565 E T 0.777 G T 0.881 D T 0.512 I E 0.872 V E 0.974 S E 0.981 V E 0.954 D E 0.733 V E 0.409 G T 0.412 A E 0.511 V E 0.499 Y E 0.365 Q T 0.557 G T 0.537 L E 0.412 Y E 0.520 G E 0.479 D E 0.412 A E 0.533 A E 0.640 V E 0.775 T E 0.791 Y E 0.808 I E 0.726 V E 0.345 G C 0.454 E C 0.718 T C 0.831 D C 0.952 E H 0.970 R H 0.986 G H 0.987 K H 0.995 E H 0.992 L H 0.996 V H 0.997 R H 0.997 V H 0.995 T H 0.995 R H 0.995 E H 0.996 V H 0.995 L H 0.993 E H 0.993 K H 0.988 A H 0.981 I H 0.934 K H 0.906 M H 0.796 I C 0.662 K T 0.781 P T 0.865 G T 0.903 I T 0.712 R C 0.640 L H 0.670 G H 0.746 D H 0.846 V H 0.957 S H 0.977 H H 0.991 C H 0.994 I H 0.998 Q H 0.998 E H 0.997 T H 0.997 V H 0.992 E H 0.985 S H 0.970 V H 0.928 G C 0.918 F C 0.885 N C 0.737 V C 0.376 I T 0.372 R T 0.459 D T 0.554 Y T 0.493 V T 0.371 G T 0.442 H T 0.416 G C 0.348 V C 0.348 G E 0.445 R E 0.471 E E 0.520 L E 0.485 H T 0.375 E T 0.416 D T 0.459 P C 0.434 Q C 0.414 I T 0.337 P T 0.347 N T 0.396 Y T 0.399 G T 0.429 T T 0.599 P T 0.629 G T 0.748 T T 0.722 G T 0.453 V C 0.380 V E 0.422 L E 0.484 R T 0.572 K T 0.848 G T 0.905 M E 0.597 T E 0.893 L E 0.959 A E 0.950 I E 0.888 E E 0.746 P E 0.710 M E 0.807 V E 0.844 S E 0.795 E E 0.545 G T 0.492 D T 0.622 W T 0.559 R C 0.362 V E 0.579 V E 0.554 V E 0.547 K T 0.453 E T 0.730 D T 0.795 G T 0.682 W E 0.445 T E 0.674 A E 0.863 V E 0.842 T E 0.756 V E 0.464 D T 0.626 G T 0.710 S E 0.399 R E 0.787 C E 0.900 A E 0.967 H E 0.975 F E 0.961 E E 0.880 H E 0.766 T E 0.920 I E 0.976 L E 0.988 I E 0.981 T E 0.805 E T 0.820 N T 0.940 G T 0.813 A E 0.690 E E 0.880 I E 0.864 L E 0.755 T E 0.419 K C 0.468 E C 0.743 G C 0.920 END