PFRMAT SS TARGET T0182 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0182.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 300 METHOD MODEL 1 M C 0.951 I C 0.474 R E 0.392 I C 0.573 K C 0.604 T C 0.785 P H 0.967 S H 0.981 E H 0.988 I H 0.996 E H 0.990 K H 0.989 M H 0.992 K H 0.994 K H 0.989 A H 0.989 G H 0.991 K H 0.987 A H 0.986 V H 0.989 A H 0.989 V H 0.989 A H 0.988 L H 0.988 R H 0.979 E H 0.963 V H 0.953 R H 0.906 K H 0.769 V H 0.654 I H 0.436 V C 0.642 P T 0.859 G T 0.910 K C 0.656 T C 0.779 A H 0.962 W H 0.980 D H 0.985 V H 0.991 E H 0.995 T H 0.992 L H 0.991 V H 0.991 L H 0.991 E H 0.989 I H 0.989 F H 0.986 K H 0.975 K H 0.884 L T 0.479 R T 0.605 V C 0.714 K C 0.479 P C 0.337 A C 0.274 F T 0.287 K T 0.273 G C 0.274 Y C 0.391 G C 0.499 G C 0.424 Y C 0.509 K C 0.544 Y C 0.351 A E 0.562 T E 0.619 C E 0.579 V E 0.386 S C 0.457 V T 0.349 N T 0.300 E C 0.212 E C 0.215 V E 0.276 V E 0.260 H C 0.307 G C 0.382 L C 0.524 P C 0.404 L T 0.528 K T 0.413 E C 0.389 K E 0.475 V E 0.638 F C 0.547 K C 0.751 E T 0.859 G T 0.880 D C 0.578 I E 0.875 V E 0.978 S E 0.987 V E 0.982 D E 0.897 V E 0.760 G E 0.612 A E 0.745 V E 0.761 Y E 0.659 Q T 0.633 G T 0.573 L E 0.482 Y E 0.675 G E 0.596 D E 0.504 A E 0.612 A E 0.756 V E 0.754 T E 0.744 Y E 0.739 I E 0.637 V C 0.424 G S 0.436 E S 0.481 T C 0.640 D C 0.873 E H 0.909 R H 0.949 G H 0.982 K H 0.993 E H 0.993 L H 0.997 V H 0.998 R H 0.998 V H 0.997 T H 0.998 R H 0.995 E H 0.992 V H 0.989 L H 0.993 E H 0.989 K H 0.981 A H 0.977 I H 0.949 K H 0.757 M H 0.467 I C 0.340 K C 0.727 P T 0.798 G T 0.826 I C 0.524 R C 0.652 L H 0.755 G H 0.788 D H 0.875 V H 0.963 S H 0.982 H H 0.991 C H 0.995 I H 0.994 Q H 0.993 E H 0.993 T H 0.993 V H 0.992 E H 0.975 S H 0.868 V T 0.642 G T 0.810 F C 0.874 N C 0.649 V C 0.422 I C 0.445 R E 0.352 D E 0.284 Y E 0.331 V E 0.431 G E 0.462 H E 0.415 G E 0.398 V E 0.306 G S 0.250 R C 0.352 E E 0.474 L E 0.401 H E 0.289 E S 0.320 D C 0.463 P C 0.417 Q C 0.332 I C 0.356 P C 0.404 N C 0.347 Y C 0.346 G C 0.399 T C 0.778 P T 0.405 G T 0.443 T C 0.363 G C 0.395 V C 0.439 V E 0.573 L C 0.502 R C 0.759 K T 0.838 G T 0.882 M E 0.494 T E 0.924 L E 0.951 A E 0.943 I E 0.922 E E 0.737 P E 0.464 M E 0.612 V E 0.632 S E 0.505 E E 0.374 G C 0.506 D T 0.390 W T 0.332 R C 0.333 V E 0.529 V E 0.628 V E 0.510 K C 0.413 E T 0.496 D T 0.485 G S 0.389 W C 0.434 T E 0.701 A E 0.797 V E 0.817 T E 0.648 V E 0.369 D T 0.639 G T 0.464 S E 0.651 R E 0.860 C E 0.937 A E 0.968 H E 0.964 F E 0.939 E E 0.870 H E 0.795 T E 0.871 I E 0.961 L E 0.973 I E 0.914 T C 0.581 E T 0.809 N T 0.681 G S 0.744 A C 0.629 E E 0.743 I E 0.818 L E 0.658 T C 0.389 K C 0.501 E C 0.924 G C 0.999 END