Best Alignments for T0180

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0180-1d2zA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0180-1d2zA-2track-protein-STR-local-adpstyle5.pw.al 6.0305e-01 1d2zA a.77.1.1
T0180-1qqfA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0180-1qqfA-2track-protein-STR-local-adpstyle5.pw.al 4.8950e+00 1c3d a.102.4.4
T0180-1i7pA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0180-1i7pA-2track-protein-STR-local-adpstyle5.pw.al 7.6247e+00 b.43.4.2
T0180-1g2nA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0180-1g2nA-2track-protein-STR-local-adpstyle5.pw.al 8.9171e+00 1lbd a.123.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001