PFRMAT SS
TARGET T0180
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0180.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1
METHOD
MODEL 1
M C 0.998
V C 0.712
G C 0.469
R C 0.450
R C 0.582
P C 0.431
G C 0.346
G S 0.360
G C 0.403
L C 0.337
K C 0.341
D C 0.359
T C 0.391
K C 0.476
P C 0.497
V E 0.778
V E 0.889
V E 0.892
R E 0.850
L E 0.597
Y C 0.642
P H 0.344
D H 0.470
E H 0.613
I H 0.738
E H 0.688
A H 0.604
L H 0.603
K H 0.520
S H 0.379
R C 0.269
V C 0.474
P C 0.684
A T 0.323
N T 0.334
T H 0.307
S H 0.417
M H 0.686
S H 0.829
A H 0.885
Y H 0.906
I H 0.915
R H 0.912
R H 0.893
I H 0.890
I H 0.842
L H 0.768
N H 0.639
H H 0.519
L H 0.355
E C 0.266
D C 0.577
D C 0.988
END