PFRMAT SS
TARGET T0179
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0179.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 135
METHOD
MODEL 1
M C 0.999
S C 0.813
E C 0.496
L C 0.362
W E 0.659
Y E 0.743
T E 0.810
E E 0.738
K E 0.548
Q E 0.374
T C 0.602
K T 0.847
N T 0.882
F C 0.433
G E 0.683
I E 0.893
T E 0.959
M E 0.934
K E 0.928
V E 0.714
N E 0.488
K E 0.430
T H 0.528
L H 0.511
H H 0.513
T T 0.345
E T 0.348
Q C 0.368
T C 0.647
E T 0.346
F T 0.303
Q E 0.437
H E 0.836
L E 0.970
E E 0.991
M E 0.988
V E 0.975
E E 0.912
T E 0.485
E T 0.371
E T 0.459
F T 0.274
G T 0.310
N E 0.531
M E 0.882
L E 0.966
F E 0.965
L E 0.945
D T 0.459
G T 0.562
M E 0.822
V E 0.940
M E 0.939
T E 0.810
S E 0.469
E C 0.260
K T 0.262
D H 0.246
E H 0.533
F H 0.689
V H 0.803
Y H 0.879
H H 0.910
E H 0.919
M H 0.941
V H 0.909
A H 0.823
H H 0.733
V H 0.665
P H 0.526
L H 0.416
F H 0.354
T H 0.259
H C 0.434
P C 0.480
N C 0.417
P C 0.636
E C 0.525
H E 0.794
V E 0.980
L E 0.990
V E 0.991
V E 0.920
G E 0.511
G C 0.558
G C 0.402
D T 0.542
G H 0.570
G H 0.896
V H 0.958
I H 0.969
R H 0.976
E H 0.975
I H 0.957
L H 0.918
K H 0.685
H C 0.327
P S 0.383
S C 0.379
V C 0.294
K E 0.434
K E 0.708
A E 0.867
T E 0.903
L E 0.933
V E 0.919
D E 0.751
I C 0.554
D C 0.892
G H 0.888
K H 0.954
V H 0.980
I H 0.995
E H 0.991
Y H 0.986
S H 0.981
K H 0.965
K H 0.918
F H 0.864
L H 0.551
P H 0.386
S H 0.337
I T 0.264
A T 0.329
G C 0.356
K C 0.337
L T 0.350
D T 0.298
D C 0.443
P T 0.351
R E 0.321
V E 0.715
D E 0.888
V E 0.932
Q E 0.920
V E 0.809
D E 0.428
D C 0.275
G H 0.748
F H 0.881
M H 0.884
H H 0.881
I H 0.841
A H 0.814
K H 0.700
S H 0.407
E T 0.478
N T 0.613
Q C 0.348
Y C 0.733
D E 0.720
V E 0.992
I E 0.997
M E 0.993
V E 0.891
D C 0.574
S C 0.379
T S 0.351
E S 0.438
P C 0.321
V C 0.332
G C 0.465
P C 0.567
A C 0.266
V G 0.373
N G 0.338
L H 0.365
F H 0.326
T H 0.494
K H 0.973
G H 0.990
F H 0.993
Y H 0.996
A H 0.994
G H 0.987
I H 0.985
A H 0.952
K H 0.792
A T 0.567
L C 0.511
K C 0.576
E E 0.363
D E 0.469
G E 0.910
I E 0.974
F E 0.984
V E 0.951
A E 0.877
Q E 0.762
T E 0.296
D S 0.421
N C 0.422
P T 0.330
W T 0.369
F C 0.293
T H 0.392
P H 0.899
E H 0.951
L H 0.972
I H 0.991
T H 0.994
N H 0.992
V H 0.991
Q H 0.990
R H 0.974
D H 0.943
V H 0.936
K H 0.816
E H 0.714
I H 0.656
F C 0.490
P S 0.394
I E 0.541
T E 0.823
K E 0.878
L E 0.815
Y E 0.625
T E 0.603
A E 0.665
N E 0.699
I E 0.666
P C 0.445
T C 0.495
Y C 0.389
P T 0.310
S T 0.383
G S 0.313
L E 0.422
W E 0.706
T E 0.853
F E 0.902
T E 0.906
I E 0.867
G E 0.697
S C 0.390
K C 0.289
K C 0.333
Y C 0.406
D C 0.576
P T 0.228
L H 0.252
A H 0.267
V C 0.317
E C 0.397
D C 0.409
S C 0.387
R C 0.406
F C 0.344
F C 0.376
D C 0.375
I C 0.278
E C 0.340
T C 0.371
K E 0.546
Y E 0.411
Y C 0.441
T C 0.766
K T 0.417
D T 0.510
I H 0.463
H H 0.538
K H 0.565
A H 0.482
A H 0.472
F H 0.356
V C 0.339
L C 0.885
P C 0.528
K H 0.903
F H 0.866
V H 0.885
S H 0.886
D H 0.811
L H 0.717
I H 0.474
K C 0.989
END