PFRMAT SS
TARGET T0178
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0178.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 52
METHOD
MODEL 1
M C 0.976
I H 0.696
D H 0.677
V H 0.922
R H 0.925
K H 0.910
Y H 0.915
I H 0.882
D H 0.859
N H 0.702
A T 0.507
A T 0.479
L C 0.598
K C 0.740
P T 0.662
H T 0.726
L C 0.577
S C 0.734
E H 0.949
K H 0.973
E H 0.979
I H 0.995
E H 0.996
E H 0.991
F H 0.988
V H 0.991
L H 0.985
K H 0.974
S H 0.969
E H 0.927
E H 0.792
L T 0.677
G T 0.816
I C 0.755
Y E 0.753
A E 0.976
V E 0.987
C E 0.976
V E 0.797
N C 0.755
P T 0.348
Y T 0.376
H H 0.450
V H 0.826
K H 0.967
L H 0.978
A H 0.980
S H 0.968
S H 0.913
I H 0.740
A H 0.435
K T 0.449
K T 0.453
V C 0.557
K E 0.657
V E 0.880
C E 0.857
C E 0.737
V E 0.599
I E 0.301
G C 0.316
F C 0.650
P C 0.488
L T 0.535
G T 0.367
L S 0.324
N C 0.336
K H 0.553
T H 0.842
S H 0.934
V H 0.954
K H 0.980
V H 0.988
K H 0.993
E H 0.993
A H 0.994
V H 0.994
E H 0.993
A H 0.989
V H 0.976
R H 0.897
D H 0.501
G T 0.642
A C 0.546
Q S 0.443
E C 0.351
L C 0.480
D E 0.611
I E 0.777
V E 0.579
W E 0.378
N C 0.570
L H 0.688
S H 0.739
A H 0.757
F H 0.822
K H 0.683
S T 0.483
E T 0.393
K C 0.561
Y H 0.936
D H 0.968
F H 0.979
V H 0.989
V H 0.993
E H 0.992
E H 0.991
L H 0.995
K H 0.995
E H 0.993
I H 0.993
F H 0.990
R H 0.971
E H 0.899
T H 0.449
P T 0.809
S T 0.846
A C 0.570
V E 0.770
H E 0.945
K E 0.980
V E 0.965
I E 0.947
V E 0.861
E E 0.638
T E 0.388
P E 0.325
Y C 0.348
L C 0.700
N C 0.907
E H 0.968
E H 0.986
E H 0.987
I H 0.995
K H 0.993
K H 0.990
A H 0.993
V H 0.997
E H 0.998
I H 0.998
C H 0.998
I H 0.993
E H 0.957
A H 0.592
G T 0.833
A C 0.952
D S 0.902
F E 0.596
I E 0.646
K E 0.697
T C 0.333
S S 0.326
T S 0.359
G C 0.528
F C 0.597
A C 0.613
P C 0.325
R T 0.393
G C 0.395
T C 0.850
T C 0.850
L H 0.973
E H 0.980
E H 0.990
V H 0.998
R H 0.996
L H 0.997
I H 0.996
K H 0.992
S H 0.978
S H 0.926
A H 0.638
K H 0.339
G T 0.424
R T 0.432
I C 0.410
K C 0.459
V E 0.477
K E 0.658
A E 0.473
S C 0.335
G S 0.544
G S 0.396
I C 0.462
R C 0.570
D C 0.606
L H 0.951
E H 0.981
T H 0.985
A H 0.994
I H 0.995
S H 0.994
M H 0.993
I H 0.991
E H 0.966
A H 0.880
G H 0.771
A H 0.669
D H 0.708
R H 0.662
I H 0.416
G T 0.311
T C 0.374
S C 0.394
S H 0.505
G H 0.740
I H 0.917
S H 0.925
I H 0.919
A H 0.885
E H 0.761
E H 0.489
F C 0.327
L C 0.329
K C 0.366
R C 0.327
H C 0.361
L C 0.802
I C 0.999
END