PFRMAT SS
TARGET T0177
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0177.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 63
METHOD
MODEL 1
M C 0.803
G C 0.661
R C 0.542
A H 0.685
F H 0.687
E H 0.677
Y H 0.756
R H 0.822
R H 0.865
A H 0.848
A H 0.917
K H 0.912
E H 0.946
K H 0.940
R H 0.893
W H 0.889
D H 0.930
K H 0.923
M H 0.885
S H 0.720
K H 0.883
V H 0.968
F H 0.971
P H 0.983
K H 0.979
L H 0.990
A H 0.987
K H 0.997
A H 0.998
I H 0.999
T H 0.999
L H 0.998
A H 0.997
A H 0.996
K H 0.993
D H 0.869
G C 0.829
G C 0.704
S C 0.499
E T 0.763
P T 0.657
D T 0.788
T T 0.656
N C 0.691
A H 0.900
K H 0.938
L H 0.997
R H 0.999
T H 1.000
A H 0.999
I H 0.998
L H 0.995
N H 0.990
A H 0.970
K H 0.844
A H 0.740
Q H 0.542
N C 0.778
M C 0.789
P C 0.773
K H 0.861
D H 0.923
N H 0.962
I H 0.993
D H 0.995
A H 0.992
A H 0.991
I H 0.988
K H 0.970
R H 0.894
A H 0.525
S T 0.446
S T 0.609
K T 0.612
E T 0.500
G T 0.443
N C 0.417
L E 0.722
S E 0.923
E E 0.965
I E 0.965
T E 0.965
Y E 0.947
E E 0.949
G E 0.898
K E 0.842
A E 0.532
N T 0.848
F T 0.939
G T 0.771
V E 0.908
L E 0.983
I E 0.995
I E 0.997
M E 0.990
E E 0.983
C E 0.957
M E 0.859
T E 0.470
D T 0.530
N T 0.646
P H 0.437
T H 0.802
R H 0.845
T H 0.858
I H 0.991
A H 0.995
N H 0.995
L H 0.999
K H 0.999
S H 0.998
Y H 0.997
F H 0.988
N H 0.958
K H 0.849
T H 0.514
Q C 0.546
G C 0.533
A C 0.362
S C 0.396
I C 0.431
V T 0.535
P T 0.847
N T 0.907
G T 0.872
S T 0.401
L E 0.281
E E 0.300
F E 0.401
M E 0.449
F E 0.407
N E 0.417
R E 0.478
K E 0.433
S C 0.428
V E 0.730
F E 0.919
E E 0.918
C E 0.898
L E 0.567
K C 0.752
N C 0.920
E C 0.355
V T 0.331
E H 0.471
N T 0.368
L T 0.381
K T 0.319
L C 0.612
S C 0.759
L H 0.979
E H 0.992
D H 0.995
L H 0.999
E H 0.999
F H 0.998
A H 0.998
L H 0.998
I H 0.993
D H 0.967
Y H 0.834
G C 0.903
L C 0.689
E C 0.294
E E 0.594
L E 0.744
E E 0.752
E E 0.592
V T 0.472
E T 0.762
D T 0.734
K E 0.538
I E 0.915
I E 0.970
I E 0.983
R E 0.950
G E 0.638
D C 0.709
Y T 0.467
N G 0.418
S G 0.368
F H 0.909
K H 0.960
L H 0.982
L H 0.992
N H 0.995
E H 0.994
G H 0.994
F H 0.991
E H 0.988
S H 0.962
L H 0.838
K C 0.935
L C 0.865
P C 0.551
I E 0.798
L E 0.873
K E 0.846
A E 0.793
S E 0.868
L E 0.924
Q E 0.911
R E 0.892
I E 0.627
A T 0.444
T T 0.494
T E 0.372
P E 0.519
I E 0.666
E E 0.637
L C 0.637
N C 0.752
D H 0.833
E H 0.855
Q H 0.928
M H 0.992
E H 0.995
L H 0.994
T H 0.998
E H 0.999
K H 0.997
L H 0.996
L H 0.997
D H 0.991
R H 0.986
I H 0.963
E H 0.918
D H 0.739
D H 0.503
D C 0.414
D H 0.289
V H 0.351
V E 0.262
A E 0.662
L E 0.734
Y E 0.664
T E 0.626
N C 0.447
I C 0.736
E C 0.975
END