PFRMAT SS
TARGET T0177
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0177.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 63
METHOD
MODEL 1
M C 0.907
G C 0.574
R C 0.440
A H 0.376
F H 0.828
E H 0.878
Y H 0.907
R H 0.942
R H 0.942
A H 0.932
A H 0.936
K H 0.926
E H 0.892
K H 0.911
R H 0.930
W H 0.916
D H 0.932
K H 0.868
M H 0.811
S H 0.831
K H 0.859
V H 0.893
F H 0.966
P H 0.990
K H 0.994
L H 0.997
A H 0.998
K H 0.997
A H 0.997
I H 0.998
T H 0.998
L H 0.998
A H 0.997
A H 0.993
K H 0.975
D H 0.666
G T 0.782
G C 0.557
S C 0.604
E C 0.486
P G 0.404
D T 0.381
T G 0.270
N C 0.404
A H 0.694
K H 0.814
L H 0.964
R H 0.987
T H 0.991
A H 0.994
I H 0.995
L H 0.991
N H 0.982
A H 0.968
K H 0.932
A H 0.756
Q T 0.760
N T 0.925
M C 0.740
P C 0.921
K H 0.243
D H 0.414
N H 0.662
I H 0.937
D H 0.971
A H 0.977
A H 0.975
I H 0.971
K H 0.910
R H 0.777
A H 0.588
S C 0.264
S T 0.323
K S 0.365
E C 0.365
G C 0.374
N C 0.438
L E 0.664
S E 0.829
E E 0.911
I E 0.957
T E 0.972
Y E 0.978
E E 0.966
G E 0.920
K E 0.806
A E 0.438
N T 0.731
F T 0.734
G S 0.307
V C 0.384
L E 0.740
I E 0.884
I E 0.964
M E 0.932
E E 0.860
C E 0.692
M E 0.304
T C 0.366
D C 0.508
N C 0.492
P T 0.274
T H 0.540
R H 0.701
T H 0.824
I H 0.943
A H 0.953
N H 0.938
L H 0.966
K H 0.970
S H 0.964
Y H 0.946
F H 0.899
N H 0.697
K H 0.565
T T 0.356
Q T 0.468
G C 0.399
A C 0.260
S E 0.287
I C 0.248
V C 0.413
P C 0.372
N T 0.646
G T 0.501
S C 0.390
L E 0.641
E E 0.643
F E 0.646
M E 0.554
F E 0.588
N E 0.498
R E 0.507
K E 0.601
S E 0.637
V E 0.901
F E 0.955
E E 0.937
C E 0.810
L E 0.598
K C 0.715
N C 0.956
E C 0.326
V T 0.268
E T 0.258
N T 0.291
L T 0.328
K C 0.337
L C 0.453
S C 0.730
L H 0.915
E H 0.946
D H 0.976
L H 0.984
E H 0.983
F H 0.980
A H 0.982
L H 0.974
I H 0.947
D H 0.824
Y T 0.613
G T 0.699
L C 0.629
E C 0.406
E E 0.437
L E 0.642
E E 0.674
E E 0.478
V T 0.321
E T 0.465
D S 0.421
K E 0.649
I E 0.942
I E 0.984
I E 0.973
R E 0.924
G E 0.673
D C 0.656
Y H 0.226
N H 0.336
S H 0.473
F H 0.912
K H 0.961
L H 0.969
L H 0.992
N H 0.996
E H 0.995
G H 0.995
F H 0.995
E H 0.988
S H 0.953
L T 0.711
K T 0.984
L C 0.913
P E 0.548
I E 0.756
L E 0.861
K E 0.898
A E 0.921
S E 0.913
L E 0.916
Q E 0.889
R E 0.809
I E 0.487
A C 0.454
T S 0.360
T S 0.607
P C 0.513
I C 0.421
E E 0.476
L C 0.767
N C 0.914
D H 0.792
E H 0.877
Q H 0.932
M H 0.975
E H 0.971
L H 0.966
T H 0.982
E H 0.989
K H 0.982
L H 0.979
L H 0.976
D H 0.915
R H 0.768
I H 0.588
E T 0.395
D T 0.329
D C 0.311
D T 0.582
D C 0.364
V C 0.439
V E 0.428
A E 0.541
L E 0.467
Y E 0.439
T C 0.363
N C 0.507
I C 0.630
E C 0.996
END