Best Alignments for T0175

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0175-1kpgA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0175-1kpgA-2track-protein-STR-local-adpstyle5.pw.al 8.7572e-23 c.66.1.18
T0175-1l1eA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0175-1l1eA-2track-protein-STR-local-adpstyle5.pw.al 2.6919e-22
T0175-1dl5A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0175-1dl5A-2track-protein-STR-local-adpstyle5.pw.al 7.5628e-18 1dl5A c.66.1.7
T0175-1i1nA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0175-1i1nA-2track-protein-STR-local-adpstyle5.pw.al 9.7900e-18
T0175-1xvaA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0175-1xvaA-2track-protein-STR-local-adpstyle5.pw.al 4.9465e-17 1xvaA c.66.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001