PFRMAT SS
TARGET T0175
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0175.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 561
METHOD
MODEL 1
M C 0.747
D C 0.573
I C 0.416
P H 0.289
R H 0.304
I H 0.305
F H 0.325
T H 0.323
I H 0.312
S H 0.353
E H 0.365
S T 0.374
E T 0.381
H T 0.400
R T 0.369
I C 0.346
H H 0.349
N H 0.433
P H 0.591
F H 0.565
T H 0.691
E H 0.877
E H 0.895
K H 0.936
Y H 0.983
A H 0.987
T H 0.991
L H 0.986
G H 0.981
R H 0.961
V H 0.900
L H 0.628
R C 0.788
M C 0.706
K T 0.846
P T 0.912
G T 0.899
T E 0.473
R E 0.872
I E 0.912
L E 0.885
D E 0.815
L C 0.419
G C 0.419
S T 0.551
G T 0.525
S H 0.475
G H 0.654
E H 0.976
M H 0.995
L H 0.998
C H 0.999
T H 0.999
W H 0.999
A H 0.997
R H 0.991
D H 0.970
H H 0.600
G C 0.847
I C 0.712
T E 0.695
G E 0.957
T E 0.978
G E 0.966
I E 0.844
D C 0.537
M C 0.695
S C 0.864
S H 0.929
L H 0.967
F H 0.979
T H 0.998
A H 0.997
Q H 0.997
A H 0.997
K H 0.996
R H 0.994
R H 0.992
A H 0.983
E H 0.965
E H 0.958
L H 0.916
G C 0.833
V C 0.630
S T 0.578
E T 0.597
R T 0.423
V E 0.626
H E 0.865
F E 0.927
I E 0.871
H E 0.802
N C 0.390
D T 0.380
A G 0.476
A G 0.518
G G 0.517
Y T 0.392
V C 0.409
A T 0.429
N T 0.481
E T 0.492
K T 0.509
C T 0.464
D C 0.452
V E 0.972
A E 0.993
A E 0.989
C E 0.915
V C 0.659
G G 0.424
A G 0.609
T G 0.556
W G 0.485
I H 0.297
A C 0.559
G T 0.431
G T 0.456
F H 0.794
A H 0.921
G H 0.951
A H 0.980
E H 0.995
E H 0.996
L H 0.996
L H 0.994
A H 0.971
Q H 0.932
S H 0.768
L C 0.375
K T 0.744
P T 0.908
G T 0.922
G E 0.688
I E 0.953
M E 0.991
L E 0.989
I E 0.968
G E 0.774
E E 0.579
P C 0.367
Y T 0.369
W T 0.464
R T 0.500
Q T 0.470
L T 0.396
P C 0.362
A H 0.312
T H 0.376
E H 0.408
E H 0.446
I H 0.452
A H 0.497
Q H 0.491
A H 0.491
C H 0.494
G H 0.401
V C 0.327
S C 0.406
S C 0.434
T T 0.516
S T 0.560
D T 0.543
F T 0.424
L C 0.635
T C 0.813
L H 0.903
P H 0.941
G H 0.969
L H 0.993
V H 0.996
G H 0.995
A H 0.996
F H 0.990
D H 0.978
D H 0.922
L H 0.743
G C 0.925
Y C 0.821
D E 0.535
V E 0.838
V E 0.860
E E 0.824
M E 0.776
V E 0.639
L E 0.503
A C 0.334
D C 0.397
Q T 0.396
E T 0.394
G T 0.381
W H 0.362
D H 0.398
R H 0.449
Y H 0.478
E H 0.496
A H 0.621
A H 0.688
K H 0.730
W H 0.778
L H 0.765
T H 0.814
M H 0.912
R H 0.931
R H 0.937
W H 0.926
L H 0.910
E H 0.867
A H 0.708
N H 0.490
P H 0.498
D H 0.578
D H 0.580
D H 0.743
F H 0.821
A H 0.897
A H 0.914
E H 0.913
V H 0.917
R H 0.901
A H 0.869
E H 0.885
L H 0.780
N H 0.685
I H 0.488
A C 0.475
P C 0.428
K H 0.684
R H 0.778
Y H 0.834
V H 0.939
T H 0.954
Y H 0.961
A H 0.971
R H 0.974
E H 0.972
C H 0.964
F H 0.936
G H 0.954
W H 0.935
G H 0.934
V H 0.929
F H 0.903
A H 0.889
L H 0.770
I H 0.594
A C 0.454
R C 0.975
END