PFRMAT SS TARGET T0175 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0175.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 561 METHOD MODEL 1 M C 0.997 D C 0.802 I C 0.431 P C 0.371 R C 0.339 I C 0.343 F C 0.327 T H 0.330 I H 0.327 S H 0.329 E H 0.330 S C 0.299 E T 0.272 H T 0.275 R C 0.295 I C 0.337 H C 0.335 N H 0.352 P H 0.628 F H 0.659 T H 0.790 E H 0.924 E H 0.952 K H 0.970 Y H 0.986 A H 0.989 T H 0.990 L H 0.991 G H 0.980 R H 0.931 V H 0.853 L H 0.470 R T 0.547 M C 0.917 K C 0.920 P T 0.780 G T 0.854 T C 0.717 R E 0.799 I E 0.939 L E 0.946 D E 0.945 L E 0.750 G E 0.409 S C 0.443 G C 0.336 S S 0.264 G H 0.468 E H 0.976 M H 0.989 L H 0.994 C H 0.995 T H 0.994 W H 0.990 A H 0.981 R H 0.930 D H 0.798 H T 0.393 G T 0.565 I C 0.892 T E 0.407 G E 0.924 T E 0.982 G E 0.985 I E 0.915 D E 0.485 M C 0.737 S C 0.856 S H 0.916 L H 0.969 F H 0.985 T H 0.997 A H 0.996 Q H 0.995 A H 0.996 K H 0.996 R H 0.993 R H 0.990 A H 0.987 E H 0.971 E H 0.886 L T 0.627 G T 0.820 V C 0.868 S C 0.512 E T 0.419 R C 0.320 V E 0.716 H E 0.935 F E 0.964 I E 0.951 H E 0.859 N E 0.437 D C 0.457 A G 0.311 A G 0.356 G G 0.366 Y S 0.421 V C 0.649 A C 0.490 N C 0.419 E T 0.268 K C 0.354 C C 0.851 D S 0.568 V E 0.968 A E 0.988 A E 0.981 C E 0.867 V E 0.346 G S 0.245 A G 0.319 T G 0.334 W G 0.243 I T 0.257 A C 0.377 G S 0.382 G C 0.479 F H 0.819 A H 0.969 G H 0.981 A H 0.989 E H 0.994 E H 0.992 L H 0.988 L H 0.982 A H 0.929 Q H 0.798 S T 0.556 L C 0.628 K S 0.435 P E 0.599 G E 0.649 G E 0.936 I E 0.969 M E 0.986 L E 0.976 I E 0.961 G E 0.910 E E 0.640 P C 0.377 Y C 0.435 W C 0.345 R C 0.311 Q C 0.299 L C 0.375 P C 0.413 A C 0.363 T C 0.372 E H 0.414 E H 0.456 I H 0.488 A H 0.503 Q H 0.514 A H 0.506 C H 0.453 G H 0.348 V C 0.289 S C 0.369 S C 0.408 T C 0.348 S T 0.317 D C 0.341 F C 0.492 L C 0.585 T C 0.753 L H 0.939 P H 0.973 G H 0.980 L H 0.995 V H 0.996 G H 0.993 A H 0.991 F H 0.990 D H 0.971 D H 0.879 L T 0.675 G T 0.910 Y C 0.834 D E 0.621 V E 0.829 V E 0.884 E E 0.894 M E 0.810 V E 0.696 L E 0.519 A C 0.458 D C 0.502 Q C 0.276 E C 0.293 G C 0.316 W H 0.297 D H 0.365 R H 0.356 Y H 0.414 E H 0.494 A H 0.610 A H 0.646 K H 0.758 W H 0.838 L H 0.843 T H 0.878 M H 0.944 R H 0.970 R H 0.971 W H 0.969 L H 0.950 E H 0.818 A H 0.647 N H 0.468 P H 0.516 D H 0.599 D H 0.652 D H 0.791 F H 0.845 A H 0.903 A H 0.927 E H 0.933 V H 0.931 R H 0.916 A H 0.899 E H 0.850 L H 0.800 N H 0.710 I H 0.714 A H 0.641 P H 0.758 K H 0.847 R H 0.863 Y H 0.930 V H 0.962 T H 0.969 Y H 0.980 A H 0.986 R H 0.989 E H 0.989 C H 0.988 F H 0.991 G H 0.993 W H 0.992 G H 0.993 V H 0.991 F H 0.970 A H 0.932 L H 0.854 I H 0.539 A T 0.551 R C 0.997 END