PFRMAT SS TARGET T0173 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0173.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 64 METHOD MODEL 1 M C 0.999 S C 0.922 E S 0.437 T C 0.563 P C 0.604 R E 0.615 L E 0.952 L E 0.990 F E 0.993 V E 0.961 H E 0.839 A E 0.470 H C 0.727 P T 0.455 D T 0.438 D H 0.570 E H 0.671 S H 0.585 L H 0.481 S H 0.383 N H 0.599 G H 0.919 A H 0.979 T H 0.991 I H 0.996 A H 0.995 H H 0.996 Y H 0.996 T H 0.989 S H 0.904 R T 0.803 G T 0.952 A C 0.877 Q E 0.473 V E 0.968 H E 0.998 V E 0.999 V E 0.998 T E 0.986 C E 0.797 T C 0.478 L S 0.368 G S 0.309 E C 0.303 E C 0.316 G C 0.326 E C 0.358 V C 0.299 I C 0.359 G C 0.473 D H 0.436 R H 0.435 W H 0.423 A H 0.344 Q H 0.260 L C 0.432 T C 0.418 A T 0.337 D C 0.376 H C 0.569 A H 0.494 D H 0.430 Q H 0.508 L H 0.627 G H 0.825 G H 0.867 Y H 0.904 R H 0.961 I H 0.990 G H 0.993 E H 0.994 L H 0.996 T H 0.996 A H 0.994 A H 0.994 L H 0.994 R H 0.984 A H 0.921 L T 0.586 G T 0.823 V C 0.792 S C 0.736 A C 0.319 P E 0.371 I E 0.593 Y E 0.660 L E 0.404 G C 0.516 G T 0.243 A T 0.341 G T 0.292 R C 0.421 W C 0.529 R C 0.436 D C 0.332 S T 0.273 G C 0.307 M C 0.397 A C 0.429 G C 0.465 T C 0.424 D C 0.438 Q C 0.305 R C 0.415 S T 0.405 Q T 0.382 R S 0.420 R C 0.400 F C 0.285 V C 0.359 D C 0.403 A C 0.442 D C 0.796 P H 0.967 R H 0.983 Q H 0.988 T H 0.994 V H 0.994 G H 0.994 A H 0.994 L H 0.995 V H 0.994 A H 0.992 I H 0.990 I H 0.987 R H 0.935 E H 0.710 L H 0.394 R C 0.767 P C 0.741 H S 0.780 V E 0.962 V E 0.992 V E 0.990 T E 0.826 Y C 0.528 D C 0.789 P T 0.573 N T 0.607 G S 0.432 G T 0.340 Y T 0.386 G T 0.338 H S 0.454 P H 0.407 D H 0.527 H H 0.951 V H 0.984 H H 0.989 T H 0.991 H H 0.995 T H 0.996 V H 0.997 T H 0.997 T H 0.995 A H 0.991 A H 0.988 V H 0.975 A H 0.907 A H 0.705 A H 0.462 G T 0.315 V C 0.405 G H 0.277 S T 0.295 G H 0.270 T C 0.386 A C 0.305 D H 0.255 H C 0.259 P T 0.370 G C 0.289 D C 0.399 P C 0.484 W C 0.401 T C 0.381 V C 0.376 P E 0.416 K E 0.673 F E 0.830 Y E 0.812 W E 0.786 T E 0.679 V E 0.438 L C 0.299 G C 0.460 L C 0.419 S H 0.309 A H 0.501 L H 0.620 I H 0.626 S H 0.613 G H 0.590 A H 0.574 R H 0.591 A H 0.595 L H 0.579 V H 0.493 P H 0.375 D H 0.345 D T 0.348 L C 0.349 R C 0.540 P C 0.484 E C 0.415 W C 0.317 V C 0.350 L C 0.300 P H 0.268 R H 0.264 A C 0.298 D C 0.358 E C 0.292 I C 0.339 A C 0.504 F T 0.283 G T 0.342 Y C 0.313 S C 0.329 D C 0.318 D C 0.313 G C 0.366 I C 0.430 D C 0.435 A E 0.632 V E 0.825 V E 0.852 E E 0.811 A E 0.427 D C 0.404 E H 0.696 Q H 0.843 A H 0.950 R H 0.974 A H 0.984 A H 0.987 K H 0.996 V H 0.997 A H 0.996 A H 0.992 L H 0.989 A H 0.964 A H 0.870 H H 0.712 A H 0.488 T T 0.367 Q C 0.376 V E 0.346 V E 0.363 V C 0.368 G C 0.503 P T 0.309 T T 0.254 G E 0.499 R E 0.654 A E 0.675 A E 0.656 A E 0.518 L C 0.371 S C 0.590 N T 0.365 N T 0.347 L H 0.274 A H 0.345 L H 0.279 P E 0.272 I C 0.358 L C 0.426 A C 0.334 D C 0.246 E E 0.352 H E 0.426 Y E 0.552 V E 0.600 L E 0.482 A C 0.318 G T 0.306 G C 0.289 S C 0.364 A C 0.419 G C 0.464 A C 0.461 R C 0.352 D C 0.382 E C 0.522 R C 0.562 G C 0.648 W C 0.779 E C 0.397 T T 0.345 D T 0.351 L C 0.327 L E 0.634 A E 0.770 G E 0.780 L E 0.756 G E 0.489 F C 0.404 T C 0.500 A T 0.357 S T 0.375 G C 0.804 T C 0.998 END