PFRMAT SS
TARGET T0173
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-alpha-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	   11 (1 ABCDEFGHIST )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0173.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 64
METHOD
MODEL 1
M I 0.146
S B 0.144
E B 0.177
T E 0.206
P H 0.173
R E 0.446
L E 0.593
L E 0.746
F E 0.538
V E 0.287
H E 0.368
A E 0.287
H B 0.300
P H 0.415
D S 0.298
D H 0.221
E H 0.526
S H 0.678
L H 0.519
S H 0.476
N H 0.453
G H 0.611
A H 0.877
T H 0.950
I H 0.936
A H 0.948
H H 0.968
Y H 0.944
T H 0.783
S H 0.780
R B 0.642
G T 0.518
A B 0.652
Q E 0.522
V E 0.632
H E 0.771
V E 0.722
V E 0.803
T E 0.577
C E 0.250
T C 0.441
L I 0.195
G S 0.371
E H 0.175
E H 0.187
G S 0.167
E B 0.164
V B 0.168
I B 0.199
G B 0.325
D H 0.366
R H 0.472
W H 0.283
A H 0.303
Q B 0.181
L B 0.216
T B 0.192
A H 0.212
D B 0.164
H B 0.368
A H 0.446
D H 0.598
Q H 0.456
L H 0.587
G H 0.750
G H 0.842
Y H 0.860
R H 0.849
I H 0.924
G H 0.931
E H 0.943
L H 0.945
T H 0.948
A H 0.949
A H 0.931
L H 0.912
R H 0.819
A H 0.789
L B 0.708
G S 0.406
V E 0.344
S H 0.218
A E 0.246
P E 0.308
I E 0.305
Y E 0.237
L B 0.175
G S 0.121
G S 0.219
A B 0.168
G S 0.260
R H 0.162
W C 0.196
R B 0.187
D E 0.206
S S 0.183
G S 0.158
M E 0.199
A B 0.230
G B 0.157
T S 0.174
D E 0.171
Q S 0.241
R B 0.194
S H 0.252
Q H 0.186
R S 0.253
R H 0.217
F I 0.190
V H 0.222
D S 0.206
A B 0.343
D B 0.462
P H 0.670
R H 0.880
Q H 0.903
T H 0.932
V H 0.955
G H 0.962
A H 0.970
L H 0.952
V H 0.951
A H 0.956
I H 0.933
I H 0.739
R H 0.704
E H 0.479
L B 0.232
R A 0.403
P E 0.323
H G 0.364
V E 0.625
V E 0.762
V E 0.497
T E 0.509
Y B 0.350
D C 0.355
P H 0.359
N B 0.307
G S 0.286
G G 0.138
Y E 0.194
G B 0.159
H E 0.294
P H 0.416
D S 0.314
H H 0.628
V H 0.883
H H 0.908
T H 0.922
H H 0.954
T H 0.971
V H 0.980
T H 0.966
T H 0.968
A H 0.978
A H 0.959
V H 0.895
A H 0.869
A H 0.622
A B 0.469
G S 0.289
V H 0.225
G H 0.304
S H 0.251
G S 0.235
T B 0.202
A B 0.233
D H 0.197
H E 0.177
P H 0.140
G S 0.214
D C 0.238
P B 0.205
W E 0.196
T S 0.166
V B 0.288
P E 0.199
K E 0.288
F A 0.379
Y E 0.427
W E 0.418
T E 0.332
V H 0.178
L B 0.201
G H 0.170
L H 0.260
S H 0.455
A H 0.588
L H 0.662
I H 0.617
S H 0.493
G H 0.422
A H 0.508
R H 0.570
A H 0.595
L H 0.501
V H 0.339
P H 0.311
D H 0.205
D H 0.166
L S 0.235
R B 0.278
P B 0.259
E B 0.182
W H 0.254
V H 0.204
L H 0.203
P H 0.311
R H 0.301
A B 0.208
D S 0.215
E H 0.196
I B 0.178
A E 0.210
F H 0.247
G H 0.192
Y B 0.173
S B 0.199
D H 0.227
D H 0.177
G S 0.143
I B 0.318
D E 0.300
A E 0.314
V E 0.457
V E 0.432
E E 0.310
A A 0.282
D H 0.247
E H 0.601
Q H 0.794
A H 0.849
R H 0.908
A H 0.940
A H 0.944
K H 0.950
V H 0.947
A H 0.946
A H 0.926
L H 0.865
A H 0.865
A H 0.716
H H 0.394
A H 0.475
T H 0.300
Q E 0.208
V E 0.243
V E 0.249
V B 0.170
G C 0.227
P H 0.303
T S 0.189
G E 0.219
R E 0.276
A E 0.255
A E 0.312
A E 0.297
L B 0.301
S B 0.385
N H 0.428
N H 0.320
L H 0.376
A H 0.236
L B 0.247
P E 0.202
I E 0.223
L B 0.258
A B 0.189
D E 0.201
E E 0.227
H E 0.265
Y E 0.343
V E 0.361
L E 0.251
A B 0.191
G H 0.166
G S 0.231
S B 0.182
A B 0.220
G C 0.201
A H 0.162
R B 0.207
D H 0.162
E H 0.190
R B 0.207
G B 0.318
W B 0.288
E H 0.336
T H 0.199
D S 0.385
L H 0.246
L S 0.185
A B 0.135
G E 0.232
L E 0.310
G E 0.369
F E 0.300
T E 0.206
A H 0.165
S B 0.169
G S 0.227
T B 0.205
END