PFRMAT SS
TARGET T0172
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0172.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 258
METHOD
MODEL 1
M C 0.509
R C 0.412
K E 0.443
Y E 0.370
S C 0.431
Q C 0.348
R C 0.437
H C 0.392
I C 0.395
P H 0.864
V H 0.924
M H 0.941
V H 0.974
R H 0.986
E H 0.989
V H 0.985
I H 0.969
E H 0.944
F H 0.894
L H 0.454
K C 0.745
P C 0.642
E T 0.848
D T 0.914
E T 0.922
K T 0.528
I E 0.929
I E 0.975
L E 0.963
D E 0.936
C E 0.643
T E 0.363
V T 0.426
G T 0.512
E H 0.387
G H 0.639
G H 0.979
H H 0.995
S H 0.996
R H 0.998
A H 0.998
I H 0.997
L H 0.995
E H 0.984
H H 0.874
C T 0.765
P T 0.890
G T 0.926
C T 0.697
R E 0.848
I E 0.985
I E 0.990
G E 0.983
I E 0.947
D E 0.626
V C 0.587
D C 0.694
S H 0.855
E H 0.942
V H 0.967
L H 0.996
R H 0.995
I H 0.995
A H 0.987
E H 0.986
E H 0.983
K H 0.974
L H 0.937
K H 0.888
E H 0.800
F H 0.508
S C 0.573
D C 0.568
R C 0.467
V E 0.872
S E 0.949
L E 0.963
F E 0.918
K E 0.736
V C 0.539
S T 0.475
Y T 0.417
R G 0.424
E G 0.412
A C 0.389
D C 0.356
F H 0.348
L H 0.319
L H 0.342
K H 0.349
T T 0.415
L T 0.428
G T 0.423
I T 0.400
E C 0.510
K C 0.420
V C 0.366
D E 0.478
G E 0.970
I E 0.991
L E 0.984
M E 0.933
D E 0.490
L T 0.440
G T 0.515
V T 0.465
S C 0.444
T T 0.335
Y T 0.358
Q T 0.586
L T 0.660
K T 0.719
G T 0.751
E T 0.479
N T 0.375
R T 0.395
G C 0.501
F C 0.416
T C 0.307
F T 0.354
E T 0.495
R T 0.551
E T 0.575
E T 0.445
P C 0.411
L T 0.388
D T 0.323
M E 0.290
R C 0.377
M C 0.350
D T 0.725
L T 0.801
E T 0.878
S T 0.845
E C 0.506
V C 0.466
T C 0.851
A H 0.930
Q H 0.951
K H 0.954
V H 0.945
L H 0.925
N H 0.836
E H 0.428
L C 0.700
P C 0.870
E H 0.946
E H 0.939
E H 0.953
L H 0.974
A H 0.980
R H 0.971
I H 0.964
I H 0.945
F H 0.915
E H 0.864
Y H 0.878
G C 0.472
E H 0.636
E H 0.742
K H 0.789
R H 0.887
F H 0.924
A H 0.960
R H 0.980
R H 0.987
I H 0.993
A H 0.993
R H 0.992
K H 0.992
I H 0.990
V H 0.956
E H 0.925
N H 0.815
R C 0.455
P T 0.473
L T 0.492
N T 0.426
T C 0.413
T H 0.856
L H 0.946
D H 0.943
L H 0.956
V H 0.985
K H 0.980
A H 0.990
V H 0.979
R H 0.929
E H 0.910
A H 0.828
L C 0.451
P C 0.592
S C 0.388
Y G 0.355
E G 0.369
I H 0.338
R H 0.449
R T 0.360
R T 0.422
K C 0.437
R C 0.540
H C 0.564
F H 0.501
A H 0.637
T H 0.775
K H 0.836
T H 0.923
F H 0.967
Q H 0.978
A H 0.976
I H 0.980
R H 0.960
I H 0.949
Y H 0.932
V H 0.859
N H 0.762
R H 0.512
E H 0.516
L H 0.633
E H 0.660
N H 0.783
L H 0.926
K H 0.943
E H 0.968
F H 0.982
L H 0.994
K H 0.994
K H 0.995
A H 0.991
E H 0.927
D H 0.854
L H 0.690
L H 0.342
N T 0.778
P T 0.942
G T 0.951
G E 0.545
R E 0.945
I E 0.995
V E 0.996
V E 0.993
I E 0.946
S E 0.864
F E 0.569
H C 0.652
S C 0.512
L T 0.474
E T 0.454
D H 0.569
R H 0.817
I H 0.919
V H 0.935
K H 0.955
E H 0.969
T H 0.979
F H 0.963
R H 0.959
N H 0.823
S C 0.428
K C 0.384
K T 0.413
L T 0.357
R T 0.347
I C 0.277
L E 0.331
T C 0.313
E C 0.407
K C 0.514
P C 0.634
V C 0.642
R C 0.817
P C 0.846
S C 0.928
E H 0.930
E H 0.962
E H 0.915
I H 0.939
R H 0.942
E H 0.904
N H 0.385
P T 0.457
R T 0.575
A T 0.582
R T 0.432
S T 0.354
G H 0.374
R H 0.586
L H 0.424
R H 0.559
A H 0.474
A E 0.514
E E 0.479
R E 0.418
I C 0.335
E T 0.419
E T 0.466
G C 0.603
G C 0.801
D C 0.980
END