PFRMAT SS
TARGET T0169
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0169.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 246
METHOD
MODEL 1
M C 0.848
D C 0.506
I E 0.739
R E 0.749
T E 0.756
I C 0.511
T C 0.566
S T 0.420
S G 0.385
D H 0.497
Y H 0.878
E H 0.950
M H 0.969
V H 0.975
T H 0.980
S H 0.975
V H 0.966
L H 0.955
N H 0.927
E H 0.868
W H 0.604
W C 0.493
G C 0.368
G T 0.351
R T 0.355
Q T 0.327
L H 0.386
K H 0.523
E H 0.770
K H 0.838
L H 0.855
P H 0.887
R H 0.912
L H 0.927
F H 0.905
F H 0.891
E H 0.800
H H 0.390
F T 0.570
Q T 0.663
D T 0.613
T E 0.557
S E 0.919
F E 0.976
I E 0.978
T E 0.976
S E 0.891
E T 0.513
H T 0.927
N T 0.882
S E 0.862
M E 0.980
T E 0.983
G E 0.995
F E 0.994
L E 0.989
I E 0.982
G E 0.936
F E 0.828
Q E 0.553
S T 0.438
Q T 0.623
S T 0.600
D T 0.609
P T 0.599
E T 0.358
T E 0.816
A E 0.921
Y E 0.967
I E 0.968
H E 0.948
F E 0.948
S E 0.924
G E 0.932
V E 0.727
H C 0.484
P G 0.502
D G 0.537
F G 0.496
R H 0.356
K H 0.474
M H 0.398
Q C 0.744
I H 0.770
G H 0.882
K H 0.970
Q H 0.978
L H 0.988
Y H 0.997
D H 0.997
V H 0.996
F H 0.996
I H 0.995
E H 0.993
T H 0.991
V H 0.984
K H 0.966
Q H 0.927
R H 0.712
G C 0.910
C C 0.868
T C 0.536
R E 0.967
V E 0.989
K E 0.991
C E 0.984
V E 0.940
T E 0.767
S T 0.390
P T 0.686
V T 0.747
N T 0.429
K H 0.906
V H 0.969
S H 0.985
I H 0.992
A H 0.994
Y H 0.994
H H 0.989
T H 0.983
K H 0.969
L H 0.868
G C 0.903
F C 0.684
D E 0.700
I E 0.787
E E 0.718
K E 0.674
G E 0.747
T E 0.793
K E 0.793
T E 0.551
V T 0.565
N T 0.620
G T 0.492
I E 0.485
S E 0.694
V E 0.736
F E 0.729
A E 0.714
N E 0.562
Y E 0.430
D T 0.554
G T 0.633
P T 0.459
G T 0.408
Q T 0.325
D E 0.285
R E 0.588
V E 0.709
L E 0.736
F E 0.655
V E 0.504
K C 0.346
N C 0.705
I C 0.959
END