PFRMAT SS
TARGET T0168
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0168.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 36
METHOD
MODEL 1
M C 0.564
K H 0.747
E H 0.744
L H 0.743
I H 0.599
K H 0.500
E H 0.489
H C 0.387
Q C 0.360
K C 0.424
D C 0.454
I H 0.465
N H 0.509
P H 0.541
A H 0.721
L H 0.801
Q H 0.774
L H 0.919
H H 0.964
D H 0.972
W H 0.975
V H 0.965
E H 0.960
Y H 0.904
Y H 0.789
R H 0.518
P H 0.453
F H 0.359
A T 0.504
A T 0.587
N T 0.554
G T 0.428
Q C 0.467
S C 0.432
A H 0.337
N H 0.408
Y H 0.593
I H 0.600
P H 0.706
A H 0.757
L H 0.772
G H 0.700
K H 0.414
V C 0.490
N T 0.646
D T 0.783
S T 0.781
Q T 0.607
L E 0.563
G E 0.768
I E 0.920
C E 0.964
V E 0.976
L E 0.970
E E 0.728
P T 0.813
D T 0.957
G T 0.858
T E 0.790
M E 0.942
I E 0.883
H E 0.892
A E 0.603
G E 0.400
D T 0.598
W T 0.574
N T 0.563
V T 0.466
S C 0.464
F E 0.468
T E 0.630
M E 0.542
Q T 0.351
S T 0.324
I T 0.356
S C 0.390
K H 0.407
V H 0.957
I H 0.989
S H 0.995
F H 0.998
I H 0.998
A H 0.996
A H 0.991
C H 0.969
M H 0.922
S H 0.851
R H 0.675
G C 0.636
I H 0.742
P H 0.821
Y H 0.880
V H 0.889
L H 0.853
D H 0.886
R H 0.775
V C 0.463
D C 0.660
V C 0.444
E C 0.388
P C 0.458
T C 0.487
G C 0.468
D T 0.425
A T 0.360
F H 0.394
N H 0.505
S H 0.559
I H 0.626
I H 0.578
R H 0.597
L H 0.536
E H 0.458
I H 0.326
N T 0.468
K T 0.868
P T 0.914
G T 0.893
K T 0.740
P T 0.473
F T 0.505
N T 0.506
P C 0.609
M E 0.352
I E 0.544
N E 0.616
A E 0.674
G E 0.875
A E 0.970
L E 0.978
T E 0.969
I E 0.927
A E 0.601
S E 0.352
I T 0.278
L T 0.791
P T 0.903
G T 0.904
E T 0.759
S C 0.711
A H 0.764
Y H 0.844
E H 0.885
K H 0.936
L H 0.979
E H 0.978
F H 0.985
L H 0.993
Y H 0.995
S H 0.994
V H 0.997
M H 0.997
E H 0.991
T H 0.972
L H 0.890
I H 0.459
G T 0.518
K T 0.520
R C 0.505
P E 0.392
R C 0.478
I C 0.533
H C 0.658
E H 0.882
E H 0.900
V H 0.869
F H 0.817
R H 0.800
S H 0.694
E H 0.721
W H 0.635
E H 0.565
T H 0.550
A C 0.375
H H 0.629
R H 0.951
N H 0.990
R H 0.995
A H 0.999
L H 1.000
A H 1.000
Y H 0.999
Y H 0.997
L H 0.992
K H 0.980
E H 0.959
T H 0.848
N C 0.745
F C 0.650
L T 0.482
E T 0.609
A T 0.463
E C 0.589
V H 0.961
E H 0.967
E H 0.965
T H 0.980
L H 0.984
E H 0.980
V H 0.981
Y H 0.984
L H 0.970
K H 0.990
Q H 0.992
C H 0.990
A H 0.986
M H 0.984
E H 0.985
S H 0.961
T H 0.884
T H 0.983
E H 0.995
D H 0.992
I H 0.999
A H 0.999
L H 0.999
I H 0.999
G H 0.999
L H 0.998
I H 0.995
L H 0.991
A H 0.949
H H 0.887
D H 0.415
G C 0.666
Y C 0.612
H C 0.467
P T 0.667
I T 0.703
R T 0.778
H T 0.716
E C 0.343
Q E 0.462
V C 0.447
I C 0.629
P C 0.807
K H 0.878
D H 0.912
V H 0.946
A H 0.980
K H 0.989
L H 0.988
A H 0.995
K H 0.995
A H 0.992
L H 0.984
M H 0.964
L H 0.943
T H 0.933
C H 0.907
G H 0.577
M H 0.702
Y H 0.658
N H 0.625
A H 0.708
S H 0.614
G H 0.559
K H 0.598
Y H 0.541
A H 0.559
A H 0.444
F H 0.396
V C 0.316
G C 0.707
V C 0.675
P C 0.642
A C 0.411
K T 0.552
S T 0.704
G T 0.655
V T 0.420
S C 0.553
G C 0.505
G E 0.932
I E 0.983
M E 0.983
A E 0.968
L E 0.962
V E 0.849
P C 0.619
P T 0.511
S T 0.469
A T 0.399
R T 0.388
R T 0.413
E T 0.401
Q T 0.437
P T 0.491
F T 0.484
Q T 0.475
S T 0.375
G E 0.416
C E 0.683
G E 0.906
I E 0.967
G E 0.962
I E 0.937
Y E 0.747
G C 0.540
P C 0.609
A C 0.515
I C 0.480
D T 0.596
E T 0.657
Y T 0.553
G T 0.503
N H 0.819
S H 0.918
L H 0.931
T H 0.949
G H 0.974
G H 0.998
M H 0.998
L H 0.998
L H 0.999
K H 0.998
H H 0.998
M H 0.997
A H 0.987
Q H 0.966
E H 0.940
W H 0.846
E C 0.845
L C 0.761
S C 0.678
I C 0.741
F C 0.985
END