PFRMAT SS
TARGET T0168
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0168.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 36
METHOD
MODEL 1
M C 0.869
K H 0.578
E H 0.510
L H 0.491
I H 0.520
K H 0.505
E H 0.409
H H 0.294
Q C 0.392
K C 0.404
D C 0.381
I H 0.327
N H 0.377
P H 0.389
A H 0.643
L H 0.751
Q H 0.819
L H 0.921
H H 0.968
D H 0.972
W H 0.974
V H 0.966
E H 0.923
Y H 0.855
Y H 0.793
R H 0.615
P H 0.514
F H 0.438
A H 0.314
A T 0.383
N T 0.605
G S 0.335
Q C 0.617
S C 0.499
A C 0.380
N G 0.310
Y G 0.253
I C 0.432
P H 0.348
A G 0.442
L G 0.688
G G 0.561
K G 0.338
V C 0.469
N C 0.840
D T 0.739
S T 0.762
Q T 0.231
L E 0.602
G E 0.915
I E 0.974
C E 0.989
V E 0.984
L E 0.960
E E 0.691
P E 0.445
D T 0.906
G T 0.595
T E 0.587
M E 0.915
I E 0.940
H E 0.890
A E 0.550
G T 0.383
D C 0.384
W T 0.480
N T 0.352
V S 0.644
S C 0.487
F E 0.733
T E 0.833
M E 0.708
Q E 0.586
S E 0.444
I E 0.345
S H 0.446
K H 0.541
V H 0.889
I H 0.975
S H 0.988
F H 0.990
I H 0.993
A H 0.991
A H 0.980
C H 0.948
M H 0.898
S H 0.799
R H 0.684
G H 0.484
I H 0.871
P H 0.949
Y H 0.957
V H 0.964
L H 0.954
D H 0.949
R H 0.925
V H 0.722
D C 0.367
V C 0.549
E C 0.677
P C 0.666
T C 0.407
G S 0.739
D C 0.512
A C 0.303
F H 0.295
N H 0.301
S H 0.366
I H 0.360
I E 0.380
R E 0.427
L E 0.418
E E 0.388
I E 0.301
N C 0.349
K T 0.348
P T 0.674
G T 0.531
K C 0.587
P C 0.725
F C 0.659
N C 0.720
P H 0.283
M H 0.377
I H 0.531
N H 0.684
A H 0.816
G H 0.769
A H 0.831
L H 0.818
T H 0.846
I H 0.733
A H 0.529
S H 0.450
I H 0.386
L C 0.364
P T 0.671
G T 0.694
E C 0.589
S C 0.790
A H 0.810
Y H 0.878
E H 0.926
K H 0.970
L H 0.980
E H 0.985
F H 0.989
L H 0.995
Y H 0.996
S H 0.995
V H 0.995
M H 0.994
E H 0.980
T H 0.953
L H 0.921
I H 0.559
G T 0.363
K S 0.437
R C 0.415
P C 0.479
R C 0.487
I C 0.340
H C 0.735
E H 0.830
E H 0.877
V H 0.863
F H 0.853
R H 0.690
S H 0.613
E H 0.515
W H 0.446
E H 0.444
T H 0.471
A H 0.627
H H 0.773
R H 0.945
N H 0.974
R H 0.986
A H 0.989
L H 0.996
A H 0.997
Y H 0.997
Y H 0.996
L H 0.993
K H 0.980
E H 0.883
T T 0.737
N T 0.710
F C 0.820
L C 0.673
E C 0.616
A S 0.525
E C 0.320
V H 0.966
E H 0.991
E H 0.993
T H 0.996
L H 0.995
E H 0.993
V H 0.989
Y H 0.972
L H 0.920
K H 0.870
Q H 0.846
C H 0.832
A H 0.791
M H 0.833
E H 0.797
S H 0.654
T H 0.461
T H 0.888
E H 0.941
D H 0.970
I H 0.984
A H 0.986
L H 0.975
I H 0.970
G H 0.966
L H 0.958
I H 0.922
L H 0.850
A H 0.706
H T 0.678
D T 0.908
G C 0.435
Y C 0.591
H C 0.645
P C 0.528
I T 0.462
R T 0.415
H T 0.378
E C 0.507
Q E 0.480
V C 0.454
I C 0.456
P C 0.861
K H 0.686
D H 0.797
V H 0.928
A H 0.979
K H 0.977
L H 0.984
A H 0.986
K H 0.983
A H 0.972
L H 0.972
M H 0.937
L H 0.907
T H 0.804
C H 0.708
G H 0.464
M H 0.433
Y H 0.394
N H 0.533
A H 0.487
S H 0.549
G H 0.501
K H 0.541
Y H 0.636
A H 0.538
A H 0.457
F H 0.388
V T 0.257
G T 0.317
V C 0.563
P C 0.668
A C 0.484
K C 0.404
S C 0.465
G S 0.320
V C 0.427
S C 0.359
G E 0.438
G E 0.831
I E 0.894
M E 0.945
A E 0.945
L E 0.806
V E 0.603
P C 0.677
P H 0.257
S H 0.322
A H 0.388
R H 0.450
R T 0.320
E H 0.321
Q S 0.352
P C 0.344
F C 0.381
Q T 0.346
S T 0.548
G C 0.351
C E 0.706
G E 0.963
I E 0.985
G E 0.983
I E 0.969
Y E 0.887
G E 0.523
P C 0.437
A C 0.392
I C 0.436
D C 0.651
E T 0.541
Y T 0.699
G T 0.401
N C 0.596
S C 0.456
L H 0.926
T H 0.946
G H 0.980
G H 0.993
M H 0.996
L H 0.997
L H 0.997
K H 0.997
H H 0.995
M H 0.993
A H 0.982
Q H 0.929
E H 0.841
W H 0.474
E T 0.502
L C 0.673
S C 0.547
I C 0.654
F C 0.996
END